RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	37429737	A	G	0.00549	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr2	232319578	C	A	0.00844	NCL	-	FALSE	A-rich	SINE,Alu
chr2	120021785	T	C	0.00751	STEAP3	+	FALSE
chr1	153533813	A	T	0.00451	S100A2	-	FALSE
chr8	30536450	T	C	8.74573E-07	GSR	-	TRUE	AluSp	SINE,Alu
chr19	39220786	C	A	0.00303	ACTN4	+	FALSE	A-rich	SINE,Alu
chr1	16929100	C	T	0.00249	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr3	15483830	A	G	3.44106E-05	EAF1	+	FALSE
chr3	15113042	C	T	4.09809E-05	RBSN	-	FALSE
chr11	118965479	G	A	0.00682	H2AFX	-	FALSE	G-rich	SINE,Alu
chr1	53291425	A	G	2.55913E-05	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	145693061	A	G	0.00158	NBPF20,NBPF10	+	TRUE	AluSz6	SINE,Alu
chr2	152132130	A	G	6.12116E-05	NMI	-	FALSE
chr1	240255560	G	A	0.00810	FMN2	+	FALSE	(GGC)n	SINE,Alu
chr1	58999651	T	G	0.00980	OMA1	-	FALSE
chr1	160967754	T	C	0.00563	F11R	-	TRUE	(T)n	SINE,Alu
chr4	57326329	A	G	0.00077	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	16892279	C	A	0.00326	NBPF1	-	FALSE
chr9	136335345	G	A	0.00490	CACFD1	+	FALSE	(TG)n	SINE,Alu
chr2	37328097	T	C	0.00091		.	FALSE
chr1	27204437	T	C	0.00319		.	FALSE	AluSg7	SINE,Alu
chr1	15904318	C	T	9.04121E-06	AGMAT	-	FALSE
chr6	38140505	A	G	0.00109	BTBD9	-	FALSE
chr1	45975574	A	G	0.00299	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	16932429	C	G	0.00823	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	32374019	G	A	0.00297	PTP4A2	-	FALSE
chr2	128603119	T	C	0.00340		.	FALSE	AluSp	SINE,Alu
chr3	141012493	C	A	0.00249	PXYLP1	+	FALSE	MER58A	SINE,Alu
chr1	45976220	A	G	0.00031	MMACHC	+	TRUE
chr1	16912014	A	C	0.00704	NBPF1	-	FALSE
chr3	172365720	C	T	3.67728E-06	NCEH1	-	FALSE
chr7	1199790	G	C	0.00049	ZFAND2A	-	FALSE
chr1	162497663	G	A	0.00365	UHMK1	+	FALSE
chr1	10043527	A	G	0.00811	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr1	142805281	C	T	0.00242		.	FALSE
chr1	26143731	A	G	0.00337	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	21101369	T	C	0.00028	HP1BP3	-	TRUE	AluSc	SINE,Alu
chr2	206983255	T	C	0.00246		.	FALSE	AluJb	SINE,Alu
chr1	52520866	C	T	0.00195	TXNDC12	-	FALSE
chr3	58306638	A	G	0.00988		.	FALSE	AluSz	SINE,Alu
chr1	32687475	T	C	0.00785	TMEM234,EIF3I	+,-	FALSE
chr1	24134721	T	C	0.00113	HMGCL	-	FALSE
chr1	33149333	A	G	0.00980	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	148556784	G	A	0.00543		.	FALSE
chr2	20401855	G	A	0.00107	SDC1	-	FALSE
chr8	30536544	T	C	5.33169E-07	GSR	-	TRUE	AluSp	SINE,Alu
chr1	71531596	A	G	0.00016	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr16	89630630	C	T	0.00296	RPL13	+	FALSE
chr1	47767914	G	A	0.00061	STIL	-	FALSE
chr1	19542401	T	C	0.00010	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr9	125609939	A	T	0.00693		.	FALSE
chr13	110407598	A	G	0.00222	IRS2	-	FALSE
chr1	25169634	A	G	0.00843	CLIC4	+	FALSE
chr2	217366911	A	G	0.00449		.	FALSE	AluSz6	SINE,Alu
chr1	87328403	A	T	0.00946	SEP15	-	FALSE
chr14	63841404	T	A	0.00470	PPP2R5E	-	FALSE	(T)n	SINE,Alu
chr1	114940209	G	T	0.00638	TRIM33	-	FALSE	(T)n	SINE,Alu
chr3	127790249	A	G	0.00057	RUVBL1,SEC61A1	+,-	FALSE
chr7	2394991	C	T	9.93448E-08	EIF3B	+	FALSE
chr1	1593060	T	C	0.00538	CDK11B,SLC35E2B	-	FALSE
chr2	128603088	T	C	0.00141		.	FALSE	AluSp	SINE,Alu
chr1	26755643	A	G	0.00955	LIN28A	+	FALSE	AluSc	SINE,Alu
chr1	36067749	T	C	0.00735	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	45722381	A	G	0.00996	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr10	94414146	A	G	0.00911	KIF11	+	FALSE
chr1	33961147	T	G	0.00196	ZSCAN20	+	FALSE
chr5	93018884	A	C	0.00030	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr1	27992800	C	A	5.71645E-05	IFI6	-	FALSE	FAM	SINE,Alu
chr17	46024807	C	T	0.00295	PNPO	+	FALSE
chr6	42855182	A	G	0.00583	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	24225542	A	G	0.00348		.	FALSE	AluSq2	SINE,Alu
chr2	174090321	C	A	0.00273	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	67874689	T	C	3.52759E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr9	28403	G	T	1.21037E-06	WASH1	-	FALSE	MIR	SINE,Alu
chr1	100490000	A	G	0.00066	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr15	41590287	A	G	0.00319	OIP5-AS1	+	FALSE
chr9	130268407	C	G	0.00902	FAM129B	-	FALSE	(CTCA)n	SINE,Alu
chr22	36677551	T	C	7.06365E-05	MYH9	-	FALSE
chr1	33149375	A	G	0.00840	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	26143698	T	A	0.00832	SEPN1	+	FALSE
chr1	36024788	C	T	2.88658E-15	NCDN	+	FALSE
chrX	123045342	A	G	0.00381	XIAP	+	FALSE	(ATAA)n	SINE,Alu
chr3	56703746	A	C	0.00027	FAM208A	-	FALSE
chr1	33148736	A	G	2.35913E-09	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr8	48889672	A	G	0.00091	MCM4	+	TRUE	AluSx3	SINE,Alu
chr1	54231850	T	A	0.00681	NDC1	-	FALSE
chr7	29962664	A	C	0.00077	SCRN1	-	FALSE
chr19	50410816	G	T	0.00050	IL4I1,NUP62	-	FALSE	AluSz	SINE,Alu
chr4	169911126	C	A	0.00122	CBR4	-	FALSE
chr12	1611798	C	T	0.00338	LINC00942	+	FALSE
chr5	43609343	C	T	0.00556	NNT	+	FALSE
chr5	140798639	G	C	3.89156E-05	PCDHGA1,PCDHGA2,PCDHGA3,PCDHGB1,PCDHGA4,PCDHGB2,PCDHGA5,PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB4,PCDHGA8,PCDHGB5,PCDHGA9,PCDHGB6,PCDHGA10,PCDHGB7	+	FALSE
chr1	1252662	T	C	0.00235	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr3	98518157	A	T	8.60022E-05	DCBLD2	-	FALSE
chr11	72003767	C	A	0.00297	CLPB	-	FALSE
chr16	88784415	T	C	0.00750	PIEZO1	-	TRUE	AluSx3	SINE,Alu
chr1	148010973	C	T	0.00045	NBPF8	-	FALSE
chr4	177252327	A	G	2.51883E-09	SPCS3	+	TRUE
chr2	128601583	T	C	0.00550		.	FALSE	AluJr	SINE,Alu
chr1	10044366	A	G	0.00958	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr16	88785189	T	C	0.00636	PIEZO1	-	TRUE	AluJr	SINE,Alu
chr3	191114309	A	T	0.00209	CCDC50	+	FALSE
chr1	90401416	T	C	6.95799E-05	LRRC8D	+	FALSE
chr8	144827206	A	T	0.00196	FAM83H-AS1	+	FALSE	ERVL-B4-int	SINE,Alu
chr1	10517635	T	C	0.00523		.	FALSE	AluSx1	SINE,Alu
chr2	216903544	T	C	0.00929	PECR	-	TRUE	AluSx3	SINE,Alu
chr1	10520178	T	C	2.78615E-06		.	FALSE	AluSx	SINE,Alu
chr16	18794286	C	T	0.00633	RPS15A	-	FALSE
chr7	64435678	T	A	0.00256	ZNF117	-	FALSE
chr1	1717502	T	G	0.00239	GNB1	-	FALSE
chr1	148595665	A	G	0.00378	NBPF15	+	TRUE	L1MC4	SINE,Alu
chr1	1595540	T	C	0.00048	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	227922767	G	T	0.00202	SNAP47,JMJD4	+,-	FALSE
chr1	40537944	C	A	0.00371	CAP1	+	FALSE
chr1	179326847	A	G	0.00512	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	112258252	A	G	0.00224	RAP1A	+	FALSE
chr1	33147722	G	A	1.17176E-11	SYNC,RBBP4	+,-	FALSE
chr1	6582527	T	C	0.00139	NOL9	-	TRUE	AluSx1	SINE,Alu
chr21	34730108	A	G	0.00680	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr2	101635538	C	T	0.00069	TBC1D8,RPL31	+,-	FALSE	Charlie17	SINE,Alu
chr1	168220364	A	G	6.18665E-05		.	FALSE	AluSz6	SINE,Alu
chr3	48787674	T	C	0.00240	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr1	38174583	A	C	0.00644	CDCA8	+	FALSE
chr1	145273431	A	G	7.55666E-05	NBPF20,NOTCH2NL	+	FALSE
chr1	1469546	G	A	0.00300	ATAD3A	+	FALSE
chr4	66439443	T	C	0.00593	EPHA5	-	FALSE
chr1	16909220	T	C	0.00029	NBPF1	-	FALSE
chr19	9673274	T	C	0.00018		.	FALSE	Tigger1	SINE,Alu
chr5	53841240	A	G	0.00416	SNX18	+	FALSE
chr1	10517623	T	C	0.00664		.	FALSE	AluSx1	SINE,Alu
chr1	144851537	A	G	0.00275	NBPF20,PDE4DIP	+,-	FALSE
chr1	167389822	C	T	0.00935	POU2F1	+	FALSE
chr9	125887703	A	C	0.00067	STRBP	-	FALSE
chr1	148594563	G	T	0.00169	NBPF15	+	FALSE
chr17	65334767	T	C	3.33546E-08	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	160966351	T	C	0.00023	F11R	-	TRUE	AluSg	SINE,Alu
chr1	236702210	A	G	0.00153	LGALS8	+	FALSE
chr5	125961649	A	G	0.00302	PHAX	+	TRUE	AluSz6	SINE,Alu
chr12	125514120	A	G	0.00232		.	FALSE	(TA)n	SINE,Alu
chr1	16891340	T	A	0.00404	NBPF1	-	FALSE
chr1	109818158	C	T	4.51493E-05	CELSR2	+	FALSE
chr1	31732514	C	T	0.00588	SNRNP40	-	FALSE
chr2	230629138	C	T	0.00958	TRIP12	-	FALSE
chr1	3371371	C	G	0.00367	ARHGEF16	+	FALSE
chr2	85776508	A	T	0.00747	GGCX	-	FALSE	AluSz6	SINE,Alu
chr1	244572643	C	A	0.00681	ADSS	-	FALSE
chr1	16890155	C	T	0.00388	NBPF1	-	FALSE
chr2	88895123	T	C	0.00706	EIF2AK3	-	FALSE
chr1	19810693	G	C	0.00042	CAPZB	-	FALSE
chr10	11912065	C	G	0.00191	PROSER2-AS1,PROSER2	+,-	FALSE
chr1	114443582	A	G	0.00137	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr13	31033325	C	A	0.00792	HMGB1	-	FALSE
chr1	145512014	A	G	0.00144	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	179044212	A	G	7.62870E-06	FAM20B	+	TRUE	AluSx	SINE,Alu
chr3	124950418	T	A	0.00039	ZNF148	-	FALSE
chr1	32096265	A	G	0.00208	PEF1	-	FALSE
chr1	67874697	T	C	0.00186	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	10221287	A	G	0.00961	UBE4B	+	FALSE
chr1	25889571	G	A	0.00344	LDLRAP1	+	FALSE
chr1	110023610	G	A	0.00636	SYPL2	+	FALSE
chr16	56510334	T	C	0.00494	OGFOD1	+	FALSE
chr8	128752685	G	A	0.00000	MYC	+	FALSE
chr1	150704486	T	C	0.00947	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	93308173	T	G	0.00380	FAM69A	-	FALSE
chr2	64327544	G	T	0.00340	PELI1	-	FALSE
chr3	5258985	T	C	1.48069E-09	EDEM1	+	FALSE
chr1	111991845	C	A	0.00803	WDR77,ATP5F1	+,-	FALSE
chr1	19543457	T	C	0.00718	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	46075188	C	A	0.00199	NASP	+	FALSE	A-rich	SINE,Alu
chr1	70833400	C	T	0.00224	HHLA3	+	FALSE	LTR7	SINE,Alu
chr12	98942820	A	G	0.00568	TMPO	+	TRUE	AluSc	SINE,Alu
chr15	63616883	A	T	0.00036	CA12	-	FALSE
chr1	92862804	A	G	0.00043		.	FALSE	AluJr	SINE,Alu
chr1	117532790	C	T	0.00981	PTGFRN	+	FALSE
chr1	1246979	G	T	0.00168	PUSL1,CPSF3L	+,-	FALSE
chr5	126889370	C	T	0.00713	PRRC1	+	FALSE
chr2	208619742	A	G	0.00500	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr2	192699639	A	G	0.00017	SDPR	-	FALSE
chr1	1534614	T	C	5.67045E-11	FNDC10	-	FALSE
chr5	150647719	T	C	0.00112	GM2A	+	FALSE	AluSc	SINE,Alu
chr4	165998226	T	C	0.00754	TMEM192	-	TRUE	AluSx	SINE,Alu
chr2	9630247	T	G	0.00638	ADAM17	-	FALSE
chr1	36534736	A	G	0.00016		.	FALSE	AluJo	SINE,Alu
chr1	197128726	G	A	2.50329E-05	ZBTB41	-	FALSE
chr1	7737792	C	G	8.96820E-06	CAMTA1	+	FALSE
chr21	33032035	T	A	1.90109E-05	SOD1	+	FALSE
chr1	8412989	A	G	0.00190	RERE	-	FALSE
chr1	8412652	A	C	0.00929	RERE	-	FALSE
chr3	44790759	T	C	0.00744	KIAA1143	-	TRUE	AluY	SINE,Alu
chr2	8996326	C	T	0.00077	MBOAT2	-	FALSE
chr22	18572597	A	G	0.00322	PEX26	+	TRUE	AluYf1	SINE,Alu
chr1	21808159	G	A	9.34000E-05	NBPF3	+	FALSE
chr1	32669918	G	A	0.00344	CCDC28B	+	FALSE
chr6	42094498	T	C	0.00931	C6orf132	-	TRUE	AluSq2	SINE,Alu
chr17	49042216	T	C	0.00746	SPAG9	-	TRUE	AluJb	SINE,Alu
chr3	196230564	G	C	0.00842	RNF168	-	FALSE
chr11	65179815	C	A	0.00447	FRMD8	+	FALSE
chr1	3703611	A	C	0.00208	LRRC47	-	FALSE
chr1	36388202	T	G	0.00707	AGO1	+	FALSE	(GCCT)n	SINE,Alu
chr3	44791062	T	C	0.00035	KIAA1143	-	FALSE
chr4	2940026	T	C	0.00046	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	38182333	G	T	0.00063	EPHA10	-	FALSE	L2d2	SINE,Alu
chr1	11347150	C	A	0.00380	UBIAD1	+	FALSE
chr3	119212010	A	G	0.00685	POGLUT1	+	FALSE
chr1	101442570	A	T	0.00377	SLC30A7	+	FALSE
chr3	57551513	A	G	0.00037	PDE12	+	TRUE	AluSc	SINE,Alu
chr15	40462780	G	A	0.00251	BUB1B	+	FALSE
chr2	178406765	T	A	0.00325	AGPS	+	FALSE
chr3	188596752	A	G	0.00203	LPP	+	FALSE
chr17	61502459	T	A	0.00161	TANC2	+	FALSE
chr1	120612006	G	A	0.00602	NOTCH2	-	FALSE
chr1	36068184	T	C	0.00177	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	85278156	C	T	0.00663		.	FALSE	AluSz6	SINE,Alu
chr1	156692052	T	A	0.00369	ISG20L2	-	FALSE	AluY	SINE,Alu
chr3	183533964	T	C	2.38465E-05	MAP6D1	-	FALSE
chr2	37331750	T	C	1.79348E-08		.	FALSE	AluJb	SINE,Alu
chr4	177241194	C	T	6.44832E-08	SPCS3	+	FALSE
chr1	10520153	T	C	0.00398		.	FALSE	AluSx	SINE,Alu
chr5	125962086	A	G	0.00231	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	16893721	A	C	0.00179	NBPF1	-	FALSE
chr1	154128831	G	T	0.00183	TPM3	-	FALSE
chr1	169811639	G	C	0.00134	C1orf112	+	FALSE
chr1	12638964	T	C	0.00884	DHRS3	-	FALSE
chr2	227660628	T	G	0.00025	IRS1	-	FALSE
chr2	206987109	T	C	0.00280		.	FALSE	AluSx	SINE,Alu
chr1	36068052	G	T	1.69686E-12	PSMB2	-	FALSE	L1ME4b	SINE,Alu
chr2	132049915	A	G	0.00226	LOC440910	+	FALSE	AluSg4	SINE,Alu
chr15	41597437	T	A	0.00217		.	FALSE	AluSz6	SINE,Alu
chr5	159492107	A	T	0.00332	TTC1	+	FALSE
chr1	36067760	T	C	0.00021	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	206982257	T	C	0.00023		.	FALSE	AluSg7	SINE,Alu
chr7	22981942	G	A	0.00041	FAM126A	-	FALSE
chr4	3213832	G	A	0.00012	HTT	+	FALSE
chr2	86365817	A	G	0.00046	PTCD3	+	FALSE
chr6	116600810	G	A	0.00028	DSE,TSPYL1	+,-	FALSE
chr1	25894460	T	A	0.00520	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr8	133837579	G	A	0.00019	PHF20L1	+	FALSE	A-rich	SINE,Alu
chr1	94335332	G	T	0.00973	DNTTIP2	-	FALSE
chr1	113213009	A	T	0.00556	CAPZA1	+	FALSE
chr1	16932931	C	A	0.00169	NBPF1	-	FALSE	L1MC2	SINE,Alu
chrX	77083845	T	C	0.00102	MAGT1	-	TRUE	AluSz	SINE,Alu
chr6	7250960	G	A	0.00889	RREB1	+	FALSE
chr4	129924977	C	A	0.00760	SCLT1	-	FALSE
chr2	102508655	G	T	0.00817	MAP4K4	+	FALSE
chr1	168218494	A	G	0.00317		.	FALSE	AluSz	SINE,Alu
chr19	14203874	A	C	0.00870	PRKACA	-	FALSE	(A)n	SINE,Alu
chr1	10044366	A	G	0.00531	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr1	20977748	T	G	0.00474	PINK1,PINK1-AS	+,-	FALSE
chr1	16203171	C	T	3.13656E-06	SPEN	+	FALSE
chr1	59249682	G	A	0.00074	JUN	-	FALSE
chr2	37331627	T	C	0.00044		.	FALSE	AluJb	SINE,Alu
chr15	65442602	T	C	8.94083E-05	CLPX	-	TRUE	AluSg4	SINE,Alu
chr2	201774774	T	C	0.00017		.	FALSE	AluJr4	SINE,Alu
chr1	204521576	A	G	0.00021	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	26774224	A	G	0.00295	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr1	11084103	T	A	0.00118	TARDBP	+	FALSE
chr6	114182251	C	T	0.00021	MARCKS	+	FALSE
chr9	125887702	C	T	0.00019	STRBP	-	FALSE
chr1	24999463	G	T	0.00012	SRRM1	+	FALSE	(T)n	SINE,Alu
chr4	170643772	C	T	0.00926	CLCN3	+	FALSE
chr1	16890130	A	C	0.00054	NBPF1	-	FALSE
chr5	68850922	G	C	0.00323	OCLN	+	FALSE	AluSx4	SINE,Alu
chr5	118174735	T	C	0.00139	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	32373858	A	T	0.00100	PTP4A2	-	FALSE
chr1	32373837	G	T	0.00068	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr15	33064474	G	C	0.00653	FMN1	-	FALSE
chr4	39549797	T	C	0.00196	UGDH-AS1,SMIM14	+,-	FALSE	AluSp	SINE,Alu
chr8	17087341	C	A	0.00197	CNOT7	-	FALSE
chr1	9910357	A	T	0.00056	CTNNBIP1	-	FALSE
chr1	10518756	T	C	0.00323		.	FALSE	AluSx1	SINE,Alu
chr1	183515428	G	A	0.00232	SMG7	+	FALSE
chr1	53289686	A	G	0.00265	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	54692674	A	G	0.00864	SSBP3	-	FALSE
chr1	150199123	G	T	0.00625	ANP32E	-	FALSE
chr4	57326917	A	G	5.41162E-06	PAICS	+	TRUE	AluSx1	SINE,Alu
chr15	83826216	C	T	0.00278	HDGFRP3	-	FALSE	(CTT)n	SINE,Alu
chr5	150827303	T	G	0.00718	SLC36A1	+	FALSE
chr1	19542433	T	C	0.00076	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	1593857	T	C	0.00217	CDK11B,SLC35E2B	-	FALSE
chr6	150047423	T	C	0.00688	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	204525548	A	G	0.00501	MDM4	+	TRUE	AluSz	SINE,Alu
chr2	85548854	T	C	0.00097	TGOLN2	-	FALSE
chr1	53712569	C	A	0.00061	LRP8	-	FALSE	(CA)n	SINE,Alu
chr1	10520067	T	C	2.08449E-05		.	FALSE	AluSx	SINE,Alu
chr2	55516939	G	T	0.00628	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	179042701	A	G	0.00132	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr5	133738270	T	C	0.00067	CDKN2AIPNL	-	TRUE	FRAM	SINE,Alu
chr1	10517688	T	C	0.00179		.	FALSE	AluSx1	SINE,Alu
chr6	33377511	T	C	5.31992E-06		.	FALSE	(TG)n	SINE,Alu
chr1	144930596	C	A	0.00578	NBPF20,PDE4DIP	+,-	FALSE
chr15	42860107	A	G	0.00194	HAUS2	+	TRUE	AluSg	SINE,Alu
chr1	36068231	T	C	0.00582	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	9160866	C	A	0.00907		.	FALSE
chr1	207942472	A	G	0.00273	CD46	+	TRUE	AluSg4	SINE,Alu
chr1	145116147	T	A	0.00031	NBPF20,SEC22B	+	FALSE
chr1	160967856	T	C	0.00116	F11R	-	TRUE	AluSp	SINE,Alu
chr1	87328400	C	T	0.00755	SEP15	-	FALSE
chrX	77084042	T	C	0.00703	MAGT1	-	TRUE	AluSz	SINE,Alu
chr4	57326291	A	G	0.00549	PAICS	+	TRUE	AluJr	SINE,Alu
chr2	202152108	A	G	0.00018	CASP8	+	FALSE	AluJb	SINE,Alu
chr1	198867678	G	T	0.00545	MIR181A1HG	-	FALSE
chr6	13790931	T	C	0.00122	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr17	40176809	A	T	0.00860	NKIRAS2	+	FALSE	AluSz	SINE,Alu
chr5	122165501	A	T	0.00051	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	53290298	A	G	0.00258	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr1	36032229	A	C	0.00806	NCDN	+	FALSE
chr10	121588038	A	C	0.00100	INPP5F	+	FALSE
chr1	53292607	T	A	2.07283E-05	ZYG11B	+	FALSE
chr1	900720	A	T	0.00065	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr12	48539888	C	A	0.00088	PFKM	+	FALSE
chr2	55255314	A	C	0.00638	RTN4	-	FALSE
chr1	145513098	A	G	0.00067	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	100119819	C	T	0.00850	TOMM70	-	FALSE
chr16	10623577	T	C	0.00408	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	35817025	T	A	0.00987	ZMYM4	+	FALSE
chr17	49042394	T	C	0.00015	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	25169634	A	G	0.00531	CLIC4	+	FALSE
chr1	52306075	T	C	8.71211E-05	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr3	156258230	T	C	0.00011	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	1344749	A	G	3.37361E-05		.	FALSE	AluSx1	SINE,Alu
chr1	77556766	T	A	0.00576	PIGK	-	FALSE
chr1	214813487	A	G	0.00027	CENPF	+	FALSE
chr3	14986104	T	C	0.00992	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr2	96850885	T	C	0.00699	STARD7	-	FALSE
chr1	1309885	A	G	0.00010	AURKAIP1	-	FALSE
chr4	120982045	T	C	0.00293	MAD2L1	-	FALSE
chr6	13788387	T	C	0.00240	MCUR1	-	TRUE	AluSx	SINE,Alu
chr3	195963398	A	G	0.00271		.	FALSE
chr1	144606963	G	T	0.00080	NBPF20	+	FALSE
chr1	26143725	A	T	0.00818	SEPN1	+	FALSE	AluSx	SINE,Alu
chr9	133579734	A	G	0.00129	EXOSC2	+	TRUE	AluSx3	SINE,Alu
chr1	1337736	C	G	0.00012	MRPL20	-	FALSE
chr15	42860120	A	G	0.00045	HAUS2	+	TRUE	AluSg	SINE,Alu
chr2	231683849	A	G	0.00786	CAB39	+	FALSE
chr1	16892277	G	T	0.00164	NBPF1	-	FALSE
chr1	10519936	T	C	0.00029		.	FALSE	AluJr	SINE,Alu
chr1	154128838	G	T	0.00062	TPM3	-	FALSE
chr3	45721934	A	G	0.00011	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	79356400	C	T	0.00714	ADGRL4	-	FALSE
chr11	119533724	C	G	0.00232	NECTIN1	-	FALSE
chr11	769393	T	C	0.00186	PDDC1	-	TRUE	AluSq2	SINE,Alu
chr3	142776250	A	C	0.00926	U2SURP	+	FALSE
chr2	37331107	T	C	0.00020		.	FALSE	AluSx1	SINE,Alu
chr3	107773064	T	C	0.00421	CD47	-	TRUE	FLAM_A	SINE,Alu
chr1	78142985	T	C	0.00012	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr2	191829133	G	A	0.00097	GLS	+	FALSE
chr9	132575836	A	C	0.00546	TOR1A	-	FALSE
chr1	1345051	A	G	0.00816		.	FALSE	AluSg	SINE,Alu
chr1	22854928	A	G	0.00258	ZBTB40	+	FALSE	A-rich	SINE,Alu
chr1	39305021	G	T	0.00027	RRAGC	-	FALSE
chr1	10520715	T	C	0.00119	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	220231946	T	C	0.00439	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr2	72968438	G	T	0.00147	EXOC6B	-	FALSE
chr1	19934893	C	A	0.00171	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr3	49395695	A	C	0.00159	GPX1	-	FALSE
chr1	155838369	G	C	0.00346	SYT11	+	FALSE
chr1	3545194	C	G	0.00176	TPRG1L	+	FALSE
chr1	10518688	T	C	0.00341		.	FALSE	AluSx1	SINE,Alu
chr1	28825337	A	G	0.00191	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr5	134062606	T	G	0.00193	SEC24A	+	FALSE
chr5	98109389	T	C	0.00234	RGMB	+	FALSE
chrX	77083846	T	C	0.00668	MAGT1	-	TRUE	AluSz	SINE,Alu
chr3	194998813	A	G	0.00572	ACAP2	-	FALSE	AluSx1	SINE,Alu
chr5	43377330	T	C	0.00039	CCL28	-	TRUE	AluSz	SINE,Alu
chr1	32508397	T	C	0.00166	KHDRBS1	+	FALSE
chr19	4423353	G	A	0.00057	CHAF1A	+	FALSE	GA-rich	SINE,Alu
chr15	74210428	G	A	0.00784	LOXL1-AS1	-	FALSE	L2a	SINE,Alu
chr1	27332852	C	T	0.00829	FAM46B	-	FALSE
chr3	10192652	A	G	0.00155	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	16932809	C	T	0.00887	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	32508534	A	G	0.00666	KHDRBS1	+	FALSE
chr1	45975673	A	G	0.00827	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	184762627	T	C	0.00519	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	210004199	C	G	0.00531	DIEXF	+	FALSE
chr16	75479468	T	C	0.00250	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	3730332	T	C	9.76659E-06	CEP104	-	TRUE	AluSx3	SINE,Alu
chr2	24225006	A	G	0.00078		.	FALSE	AluSx	SINE,Alu
chr1	1594940	T	C	0.00115	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	145283980	C	T	0.00113	NBPF20,NOTCH2NL	+	FALSE
chr7	30634661	C	G	3.93145E-07	GARS	+	FALSE
chr9	80886829	C	A	6.48097E-06		.	FALSE	(TTTCTTTT)n	SINE,Alu
chr4	190864378	T	G	0.00247	FRG1	+	FALSE	GA-rich	SINE,Alu
chr1	16929327	C	T	0.00304	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	45244419	T	A	0.00027		.	FALSE
chr1	93298756	T	C	0.00264	FAM69A,RPL5	+,-	FALSE	MER5C	SINE,Alu
chr1	156565049	A	C	0.00169	GPATCH4	-	FALSE
chr3	141667690	T	C	0.00018	TFDP2	-	TRUE	AluY	SINE,Alu
chr2	217366192	T	A	0.00067		.	FALSE
chr2	46852033	A	G	0.00543	CRIPT	+	FALSE
chr6	151678865	T	G	0.00016	AKAP12	+	FALSE	(T)n	SINE,Alu
chr1	205737682	A	G	0.00320	RAB29	-	FALSE	AluSq2	SINE,Alu
chr3	169808354	G	A	0.00015	PHC3	-	FALSE
chr1	9163400	T	C	0.00726		.	FALSE	AluSp	SINE,Alu
chr1	26608021	T	A	0.00069		.	FALSE
chr1	235492546	T	G	0.00786	GGPS1	+	FALSE
chr19	9673113	T	C	0.00330		.	FALSE	AluSx3	SINE,Alu
chr1	15909744	C	T	0.00225	AGMAT	-	FALSE
chr4	38945834	T	C	0.00287	FAM114A1	+	FALSE	AluSc	SINE,Alu
chr1	204520442	A	G	7.81381E-05	MDM4	+	TRUE	AluJb	SINE,Alu
chr11	33694645	T	C	2.61039E-05	KIAA1549L	+	FALSE
chr2	85775237	T	C	6.42894E-05	GGCX	-	TRUE	AluSx4	SINE,Alu
chr1	1594977	T	C	0.00344	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr6	160211652	C	G	0.00719	MRPL18	+	FALSE
chr2	197000455	T	C	0.00426	STK17B	-	FALSE	AluSz	SINE,Alu
chr4	17802819	T	C	0.00409	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	145688973	A	G	0.00283	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	47767914	G	A	0.00636	STIL	-	FALSE
chr6	42856118	A	G	0.00743	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr15	51294995	G	A	0.00268	AP4E1	+	FALSE
chr1	197073932	T	C	0.00032	ASPM	-	FALSE
chr15	41573612	C	A	0.00355	CHP1	+	FALSE
chr3	32496328	C	A	0.00013	CMTM7	+	FALSE
chrX	2825114	T	C	0.00738	ARSD	-	TRUE	AluSx1	SINE,Alu
chr3	197682724	T	A	0.00556	IQCG	-	FALSE
chr1	204526660	A	G	0.00478	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	19542455	T	C	0.00048	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr10	51026705	C	G	0.00456	PARG	-	FALSE
chr1	36068276	T	C	2.73596E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr19	59095449	A	G	6.25071E-06	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr7	44841646	A	C	0.00316	PPIA	+	FALSE	AluJr	SINE,Alu
chr10	71647223	A	C	0.00114	COL13A1	+	FALSE
chr1	87200770	C	T	0.00623	SH3GLB1	+	FALSE
chr1	6282383	T	C	0.00371	ICMT	-	TRUE	AluSz	SINE,Alu
chr12	133298428	A	G	7.41792E-11	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	145499276	C	T	0.00581	NBPF20,NBPF10,LIX1L	+	FALSE
chr2	202030311	T	A	0.00732	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr5	76371820	A	G	0.00162		.	FALSE
chr6	13788342	T	C	0.00048	MCUR1	-	TRUE	AluSx	SINE,Alu
chr3	101369192	C	T	0.00761	ZBTB11	-	FALSE
chr1	144598726	A	C	0.00325	NBPF20	+	FALSE
chr1	145273345	T	C	0.00640	NBPF20,NOTCH2NL	+	FALSE
chr1	27107948	G	A	0.00177	ARID1A	+	FALSE
chr6	138412313	A	G	0.00092	PERP	-	FALSE
chr7	29963082	G	A	0.00118	SCRN1	-	FALSE
chr7	105162562	G	C	0.00096	PUS7	-	FALSE
chr1	46828460	C	T	0.00101	NSUN4	+	FALSE
chr1	86816600	A	G	0.00830	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr1	19542269	T	C	0.00744	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	26143697	G	C	0.00778	SEPN1	+	FALSE
chr17	28513176	G	A	0.00996	NSRP1	+	FALSE	AluJr	SINE,Alu
chr7	64441627	G	A	0.00478	ZNF117	-	FALSE
chr1	10518688	T	C	0.00154		.	FALSE	AluSx1	SINE,Alu
chr15	85185502	T	C	0.00058	WDR73,SCAND2P	+,-	FALSE	AluSc	SINE,Alu
chr1	19586458	A	G	0.00333	MRTO4	+	TRUE	AluSz	SINE,Alu
chr7	65844562	T	C	0.00695	LINC00174	-	FALSE
chr2	54896391	C	T	0.00162	SPTBN1	+	FALSE
chr1	212587320	T	C	0.00023	TMEM206	-	FALSE
chr1	40539213	A	G	0.00693	PPT1	-	FALSE
chr9	89627063	A	G	0.00614	LOC440173	-	FALSE
chr1	28825337	A	G	0.00838	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr5	44819912	A	G	0.00176		.	FALSE	AluSz	SINE,Alu
chr22	39127060	A	G	0.00647	GTPBP1	+	FALSE
chr5	53841238	G	T	0.00267	SNX18	+	FALSE
chr2	37328013	T	C	1.05952E-05		.	FALSE
chr1	205687354	T	C	0.00012	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr4	120979673	T	C	0.00074		.	FALSE	AluSg	SINE,Alu
chr19	30192475	G	A	0.00575	C19orf12	-	FALSE	MER2	SINE,Alu
chr1	24128467	C	T	0.00086	HMGCL	-	FALSE
chr10	120801785	T	A	0.00665	EIF3A	-	FALSE
chr1	92862826	A	G	0.00100		.	FALSE	AluJr	SINE,Alu
chr12	56510704	G	A	0.00042	RPL41	+	FALSE
chr5	14510067	G	T	0.00130	TRIO	+	FALSE
chr1	166820104	G	A	0.00477	POGK	+	FALSE	MER1B	SINE,Alu
chr1	121133779	C	G	0.00567	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr2	101638888	A	G	0.00127	TBC1D8	-	FALSE
chr2	37328034	T	C	1.98403E-05		.	FALSE
chr1	28662253	A	G	0.00117	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	8930561	T	G	0.00913	ENO1	-	FALSE
chr3	120046117	G	T	0.00443	LRRC58	-	FALSE	AluYi6	SINE,Alu
chr1	204521160	A	G	0.00231	MDM4	+	TRUE	AluSp	SINE,Alu
chr1	115592820	T	C	0.00107	TSPAN2	-	FALSE
chr8	124027562	C	T	0.00674	DERL1	-	FALSE
chr2	20648145	A	C	3.92667E-06	RHOB	+	FALSE
chr2	157440644	G	C	0.00394	GPD2	+	FALSE
chr1	35644504	A	T	0.00242	SFPQ	-	FALSE
chr3	129033736	T	C	0.00309	H1FX	-	FALSE
chr1	120839681	C	A	0.00077	FAM72B	+	FALSE
chr1	27662235	G	T	0.00766	TMEM222	+	FALSE
chr5	159520661	T	C	0.00776	PWWP2A	-	FALSE
chr16	719933	T	C	0.00067	RHOT2	+	FALSE
chr1	52306075	T	C	0.00135	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr2	217001882	T	C	0.00996	XRCC5	+	FALSE
chr1	16893686	G	C	0.00171	NBPF1	-	FALSE
chr19	50412217	C	G	0.00017	IL4I1,NUP62	-	FALSE	(GGT)n	SINE,Alu
chr2	204162036	A	G	0.00369	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr1	10517513	T	C	0.00982		.	FALSE	AluSx1	SINE,Alu

RBP	CCAR2
Knock-Method	shRNA
RBP Family	S1-like
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR237IWZ
Platform	HiSeq
Pubmed ID	32252787

CCAR2 - Target Gene Network