RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	194999609	G	T	0.00796	ACAP2	-	FALSE
chr1	53292607	T	A	2.07283E-05	ZYG11B	+	FALSE
chr1	152187945	C	T	9.69718E-05	HRNR	-	FALSE	(GCCAGA)n	SINE,Alu
chr1	179310439	C	T	0.00907	SOAT1	+	FALSE
chr1	23419855	T	C	0.00555	LUZP1	-	FALSE
chr13	73651653	G	T	0.00532	KLF5	+	FALSE
chr5	58267557	C	T	0.00420	PDE4D	-	FALSE
chr1	19543459	T	C	0.00074	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	182809019	G	A	0.00274	DHX9	+	FALSE
chr1	230974329	A	G	0.00355	C1orf198	-	FALSE
chr3	183476685	G	A	0.00032	YEATS2	+	FALSE
chr1	1595074	T	C	0.00296	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	9328255	A	G	0.00729	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	247319489	G	A	0.00729	ZNF124	-	FALSE
chr5	53840199	G	T	0.00857	SNX18	+	FALSE
chr13	100638107	A	T	0.00841	ZIC2	+	FALSE
chr4	38946758	G	A	0.00294	FAM114A1	+	FALSE
chr4	17629937	G	A	0.00795		.	FALSE	MER90	SINE,Alu
chr3	50150360	A	G	0.00827	RBM5	+	TRUE	AluSx	SINE,Alu
chr17	66264542	A	T	0.00110	ARSG,SLC16A6	+,-	FALSE
chr17	45761108	G	T	0.00127		.	FALSE
chr1	19543457	T	C	0.00143	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	15899312	G	T	0.00776	AGMAT	-	FALSE
chr15	38645589	A	C	0.00445	SPRED1	+	FALSE
chr1	28573293	G	A	0.00059		.	FALSE
chr3	52448770	A	G	0.00498	PHF7	+	TRUE	AluJb	SINE,Alu
chr1	53679610	G	A	0.00084	CPT2	+	FALSE	AluSz	SINE,Alu
chr5	6491892	G	A	0.00707	UBE2QL1	+	FALSE
chr14	75202963	A	G	2.20276E-06	FCF1	+	TRUE	AluSx	SINE,Alu
chr1	1573181	C	A	0.00038	CDK11B	-	FALSE
chr1	142688506	T	C	4.54862E-05		.	FALSE
chr1	120695554	G	A	0.00492		.	FALSE
chr1	11159823	T	C	0.00186	EXOSC10,LOC105376736	+,-	FALSE
chr1	55316322	A	G	0.00172	DHCR24	-	FALSE
chr5	125961611	A	G	0.00113	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	16890320	T	C	0.00045	NBPF1	-	FALSE
chr6	150045755	T	C	0.00041	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	148003752	T	C	0.00015	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	153914500	G	A	3.11507E-05	DENND4B	-	FALSE
chr8	30536544	T	C	0.00122	GSR	-	TRUE	AluSp	SINE,Alu
chr1	59120961	G	A	9.55369E-05	MYSM1	-	FALSE
chr1	19199221	C	T	0.00676	ALDH4A1	-	FALSE
chr4	177252238	A	G	9.63526E-05	SPCS3	+	TRUE
chr11	65065251	A	G	0.00580	POLA2	+	TRUE	AluY	SINE,Alu
chr1	47716042	A	T	0.00574	STIL	-	FALSE
chr2	136542427	T	A	0.00075	UBXN4	+	FALSE	L1ME4b	SINE,Alu
chr1	1662547	T	C	0.00556	SLC35E2	-	TRUE	AluY	SINE,Alu
chr16	10625101	T	C	0.00804	EMP2	-	TRUE	AluSx3	SINE,Alu
chr14	23795222	T	G	0.00162	BCL2L2-PABPN1,PABPN1	+	FALSE
chr1	6651728	C	T	0.00118	KLHL21	-	FALSE
chr3	56654248	T	G	3.99921E-06	CCDC66,FAM208A	+,-	FALSE
chr12	133635613	T	C	0.00024		.	FALSE
chr1	19585554	A	G	0.00117	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr1	10520669	T	C	0.00963	DFFA	-	FALSE	AluSc8	SINE,Alu
chr1	214524556	T	C	0.00730	PTPN14	-	TRUE	AluSg	SINE,Alu
chr8	100890423	C	A	0.00113	COX6C	-	FALSE
chr2	37331221	T	C	1.68149E-05		.	FALSE	AluSx1	SINE,Alu
chr14	95555551	C	T	0.00404	DICER1	-	FALSE
chr2	74090062	T	G	0.00248	STAMBP	+	FALSE
chr1	8045340	C	A	0.00242	PARK7	+	FALSE
chr1	20978302	A	T	0.00038	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr3	148863151	A	G	0.00062	HPS3	+	FALSE
chr1	31344952	C	T	0.00544	SDC3	-	FALSE
chr3	196662641	T	C	0.00059	NCBP2	-	FALSE
chr17	37005835	T	C	2.39380E-05		.	FALSE	AluSg	SINE,Alu
chr10	98281496	T	C	0.00509	TM9SF3	-	FALSE
chr1	179042580	A	G	0.00995	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr4	39528976	C	T	8.52335E-05	UGDH	-	FALSE
chr1	15909850	C	G	0.00660	AGMAT	-	FALSE
chr2	202032184	A	G	0.00954	CFLAR	+	FALSE	AluJo	SINE,Alu
chr6	26368938	C	T	0.00121	BTN3A2	+	FALSE
chr2	179969921	A	T	0.00203	SESTD1	-	FALSE
chr1	67451522	A	T	0.00949	MIER1	+	FALSE
chr1	114443606	A	G	0.00014	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	33071043	A	G	4.49838E-05	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	89887603	C	T	0.00308	GBP1P1	+	FALSE
chr1	3545192	C	G	0.00332	TPRG1L	+	FALSE
chr4	120978603	G	C	0.00042		.	FALSE
chr1	3546128	A	G	0.00213	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	109605645	T	G	0.00478		.	FALSE	AluY	SINE,Alu
chr1	245006499	C	G	0.00171	COX20	+	FALSE
chr2	128620435	C	A	0.00602	AMMECR1L	-	FALSE
chr2	206987636	T	C	0.00093		.	FALSE	AluJb	SINE,Alu
chr2	55516908	A	G	0.00016	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr7	22983890	T	C	0.00097	FAM126A	-	FALSE
chr1	40145850	G	C	0.00035	HPCAL4	-	FALSE
chr1	145500925	T	A	0.00997	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	10517635	T	C	7.30839E-07		.	FALSE	AluSx1	SINE,Alu
chr4	17802956	T	C	0.00249	DCAF16	-	TRUE	AluSz	SINE,Alu
chr3	63996230	A	T	0.00309	PSMD6-AS2,PSMD6	+,-	FALSE
chr1	39988084	G	A	0.00060	BMP8A,PPIEL	+,-	FALSE
chr1	24999463	G	T	0.00012	SRRM1	+	FALSE	(T)n	SINE,Alu
chr1	163309219	A	T	0.00023	NUF2	+	FALSE
chr1	28566320	T	C	0.00309		.	FALSE	AluSx1	SINE,Alu
chr19	9673005	T	C	0.00017		.	FALSE	AluSx3	SINE,Alu
chr1	16890428	T	A	0.00233	NBPF1	-	FALSE
chr1	6282324	T	C	0.00186	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	93804952	G	A	0.00421	CCDC18-AS1	-	FALSE
chr1	10044272	A	G	0.00737	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr2	188330198	C	A	0.00091	TFPI	-	FALSE	AluJb	SINE,Alu
chr1	10519947	T	C	0.00534		.	FALSE	AluJr	SINE,Alu
chr15	33064465	C	G	0.00735	FMN1	-	FALSE
chr16	75479331	T	C	0.00725	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr4	152583924	A	T	0.00284	FAM160A1	+	FALSE
chr1	33149486	A	G	0.00874	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr16	71765443	C	T	0.00223	AP1G1	-	FALSE
chr7	2768626	C	T	0.00228	AMZ1,GNA12	+,-	FALSE
chr3	156259308	T	C	0.00013	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	87200773	T	C	0.00098	SH3GLB1	+	FALSE
chr8	97506373	C	G	0.00579	SDC2	+	FALSE	(CCCCGAG)n	SINE,Alu
chr1	16932428	C	G	0.00197	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr7	35737649	G	A	0.00566	LOC101930085	+	FALSE	AluSz	SINE,Alu
chr1	3730332	T	C	6.29937E-05	CEP104	-	TRUE	AluSx3	SINE,Alu
chr16	70284570	A	C	0.00028	EXOSC6	-	FALSE	AluSx	SINE,Alu
chr2	217123958	T	C	0.00012	MARCH4	-	FALSE
chr1	955597	G	T	3.81431E-06	AGRN	+	FALSE
chr1	230416410	G	T	0.00516	GALNT2	+	FALSE
chr2	272203	C	T	0.00064	ACP1	+	FALSE
chr3	44791553	T	C	0.00298	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	144833405	C	A	0.00345	NBPF20	+	FALSE	L1MEc	SINE,Alu
chr2	64119875	G	A	0.00781	VPS54	-	FALSE
chr1	26608008	T	A	0.00496	SH3BGRL3	+	FALSE
chr1	142690928	C	A	0.00022		.	FALSE
chr7	44917406	T	C	0.00021	PURB	-	TRUE	AluSz	SINE,Alu
chr1	160966299	T	C	1.46976E-05	F11R	-	TRUE	AluSg	SINE,Alu
chr12	56510707	G	A	0.00056	RPL41	+	FALSE
chr1	43916642	T	C	0.00748	SZT2	+	FALSE	MIR3	SINE,Alu
chr8	12884103	T	C	0.00033	KIAA1456	+	FALSE	MIR	SINE,Alu
chr3	185826764	C	T	0.00364	ETV5	-	FALSE
chr1	28661736	A	G	0.00048	MED18	+	TRUE	AluSg	SINE,Alu
chr7	55433884	A	C	0.00723	LANCL2	+	FALSE
chr4	2940164	T	C	0.00381	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	44685732	T	C	8.08877E-10	DMAP1	+	FALSE
chr1	179829200	T	C	0.00497	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	150548887	C	T	0.00014	MCL1	-	FALSE
chr1	36068325	T	C	5.92205E-06	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	11721616	G	A	0.00243	FBXO44	+	FALSE
chr3	179506482	A	G	0.00017	USP13	+	FALSE	MER33	SINE,Alu
chr1	145512081	A	G	0.00579	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	49460407	C	T	0.00080	NICN1	-	FALSE	L2c	SINE,Alu
chr2	114513901	C	T	0.00655	SLC35F5	-	FALSE
chr1	1252349	A	G	0.00798	CPSF3L	-	FALSE	AluJr	SINE,Alu
chr17	49041827	T	C	0.00125	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	148595665	A	G	0.00141	NBPF15	+	TRUE	L1MC4	SINE,Alu
chr2	20818330	T	C	0.00228	HS1BP3	-	TRUE
chr1	184762627	T	C	0.00416	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	10517653	T	C	0.00792		.	FALSE	AluSx1	SINE,Alu
chr1	184762524	T	C	0.00778	FAM129A	-	TRUE	AluSz	SINE,Alu
chr17	56081432	G	A	4.92367E-05	SRSF1	-	FALSE
chr3	172365832	T	G	0.00011	NCEH1	-	FALSE
chr1	16893822	C	T	0.00808	NBPF1	-	FALSE
chr3	38566722	T	C	0.00426	EXOG	+	FALSE	MIRb	SINE,Alu
chr9	136897584	C	A	0.00060	BRD3	-	FALSE	A-rich	SINE,Alu
chr1	156499969	T	C	8.53229E-06	IQGAP3	-	FALSE
chr9	125887702	C	T	0.00019	STRBP	-	FALSE
chr4	39551140	T	C	1.44695E-08	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr6	150046734	T	C	0.00248	NUP43	-	FALSE
chr1	86118417	T	G	0.00653	ZNHIT6	-	FALSE
chr5	34906587	T	C	0.00442	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	10520702	T	C	0.00438	DFFA	-	TRUE	AluSc8	SINE,Alu
chr2	37431604	A	G	0.00876	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	9328094	A	G	0.00107	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	10518821	T	C	0.00277		.	FALSE	AluSx1	SINE,Alu
chr1	120612194	C	G	0.00561	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr3	191116133	C	T	0.00032	CCDC50	+	FALSE
chr1	33148096	A	G	0.00404	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	17733531	G	A	0.00223	RCC2	-	FALSE
chr2	198416727	T	A	0.00378	HSPE1-MOB4,MOB4	+	FALSE
chr1	45975498	A	G	0.00064	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	9160900	T	C	0.00010		.	FALSE	AluJb	SINE,Alu
chr7	300181	G	A	2.39021E-07	FAM20C	+	FALSE
chr5	118811533	G	A	0.00781	HSD17B4	+	FALSE
chr1	6282587	T	C	0.00221	ICMT	-	TRUE
chr1	43629982	C	T	0.00733	EBNA1BP2	-	FALSE
chr7	158679732	G	A	0.00456	WDR60	+	FALSE
chr7	38763068	T	C	0.00361		.	FALSE	AluSx3	SINE,Alu
chr5	112350098	C	T	7.36383E-05	DCP2	+	FALSE
chr1	19542310	T	C	2.12437E-06	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	207219603	T	C	0.00429	YOD1	-	FALSE
chr1	214529320	T	G	0.00365	PTPN14	-	FALSE	AluJb	SINE,Alu
chr1	144813815	A	G	2.28281E-05	NBPF20,NBPF9	+	FALSE
chr1	45976220	A	G	0.00031	MMACHC	+	TRUE
chr1	31905889	A	G	0.00483	SERINC2	+	FALSE
chr2	236957822	G	A	0.00929	AGAP1	+	FALSE
chr6	3225721	C	G	4.80019E-07	TUBB2B	-	FALSE
chr1	1251844	T	C	0.00731	CPSF3L	-	TRUE	AluSq2	SINE,Alu
chr3	150262004	A	T	0.00167	SERP1	-	FALSE
chr4	39551179	T	C	0.00142	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	110564996	C	T	0.00926	AHCYL1	+	FALSE
chr1	179044181	A	G	0.00083	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	36530674	A	G	0.00603		.	FALSE	AluSg	SINE,Alu
chr11	118661811	T	G	0.00582	DDX6	-	FALSE
chr3	39138082	C	T	8.26379E-05	WDR48	+	FALSE
chr5	90074268	G	A	0.00240	ADGRV1	+	FALSE
chr1	13942884	A	C	0.00016	PDPN	+	FALSE
chr1	1534826	C	T	0.00382	FNDC10	-	FALSE
chr5	137891109	C	G	0.00031	HSPA9	-	FALSE
chr2	206986926	T	C	0.00478		.	FALSE	AluJr	SINE,Alu
chr2	217366911	A	G	0.00449		.	FALSE	AluSz6	SINE,Alu
chr17	78294253	A	G	0.00031	RNF213	+	TRUE	AluSp	SINE,Alu
chr3	14186757	C	G	0.00864	XPC	-	FALSE
chr2	37334146	T	C	0.00039	EIF2AK2	-	TRUE	AluSz	SINE,Alu
chr2	26616356	A	G	0.00030	EPT1	+	FALSE
chr1	33322929	T	G	0.00340	S100PBP	+	FALSE	AluSp	SINE,Alu
chr12	54634306	T	C	0.00616	CBX5	-	TRUE	AluJr	SINE,Alu
chr9	132268440	A	G	3.40625E-05	LINC00963	+	TRUE	AluJb	SINE,Alu
chr1	19542631	T	C	0.00176	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	154989595	T	C	0.00264	ZBTB7B	+	FALSE
chr1	27338911	C	T	0.00455	FAM46B	-	FALSE
chr1	53289940	A	G	0.00694	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	16889639	T	C	0.00350	NBPF1	-	TRUE
chr1	28826118	A	G	0.00948	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	9427842	A	G	0.00923	SPSB1	+	FALSE
chr1	26755455	A	G	0.00342	LIN28A	+	TRUE	AluSc	SINE,Alu
chr2	112252628	G	T	7.26456E-05	MIR4435-2HG	-	FALSE
chr3	149679162	T	A	0.00235	RNF13	+	FALSE
chr1	86049302	A	G	0.00114	CYR61	+	FALSE
chr1	25717365	C	G	0.00229	RHCE	-	FALSE
chr6	160526905	C	A	0.00268	IGF2R	+	FALSE
chr14	53243438	T	C	7.89901E-12	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr3	188597556	A	G	0.00309	LPP	+	FALSE
chr1	28218100	T	C	0.00080	RPA2	-	FALSE
chr16	9200168	A	T	0.00908	C16orf72	+	FALSE	AluSx1	SINE,Alu
chr1	205683408	C	T	0.00082	NUCKS1	-	FALSE
chr1	150704633	T	C	1.58455E-05	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	160967833	T	C	0.00717	F11R	-	TRUE	AluSp	SINE,Alu
chr1	16892276	T	C	0.00209	NBPF1	-	FALSE
chr1	145369556	A	G	0.00061	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr2	61369774	T	C	0.00267	LOC339803	-	TRUE	AluSx	SINE,Alu
chr1	1419775	A	G	0.00090	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr17	1684352	T	C	0.00793	SMYD4	-	TRUE	AluSx1	SINE,Alu
chr1	109419841	C	T	0.00057	GPSM2	+	FALSE
chr2	17965699	C	T	0.00497	GEN1	+	FALSE	L1M4	SINE,Alu
chr1	19447819	T	C	0.00337	UBR4	-	FALSE
chr15	41591039	A	G	0.00214	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	206579936	A	G	0.00974	SRGAP2	+	FALSE
chr1	10367424	G	A	0.00286	KIF1B	+	FALSE	AluSx	SINE,Alu
chr4	10076959	C	G	6.37978E-10	WDR1	-	FALSE
chr4	57327058	A	G	0.00129	PAICS	+	TRUE	AluSx1	SINE,Alu
chr17	12915009	G	A	0.00219	ELAC2	-	FALSE
chr4	76568676	T	A	0.00051	G3BP2	-	FALSE
chr1	19543249	T	C	1.15194E-07	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr6	138412313	A	G	0.00092	PERP	-	FALSE
chr3	126755556	C	T	0.00303	PLXNA1	+	FALSE
chr2	202038524	A	G	0.00382		.	FALSE	AluSx1	SINE,Alu
chr2	239972080	T	A	0.00136	HDAC4	-	FALSE
chr1	213069114	C	A	0.00681	FLVCR1	+	FALSE
chr1	177977067	A	G	0.00030	LOC730102	-	FALSE
chr1	54692358	G	A	0.00195	SSBP3	-	FALSE
chr1	24995941	A	G	0.00382	SRRM1	+	FALSE
chr1	28826118	A	G	0.00341	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	25570565	G	A	0.00244	RSRP1	-	FALSE	Alu	SINE,Alu
chr2	17836722	T	A	0.00816	VSNL1	+	FALSE
chr1	19543247	T	C	5.23836E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	74672323	C	A	0.00616	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr1	89447720	G	A	0.00029	KYAT3,RBMXL1	-	FALSE
chr2	153512503	C	T	0.00082	PRPF40A	-	FALSE
chr7	138265310	A	G	0.00121	TRIM24	+	FALSE
chr1	228880135	C	T	0.00026	RHOU	+	FALSE
chr16	10625406	T	C	1.26372E-11	EMP2	-	TRUE	AluSx	SINE,Alu
chr2	171608711	T	A	0.00492	LOC101926913	-	FALSE
chr1	21101369	T	C	0.00028	HP1BP3	-	TRUE	AluSc	SINE,Alu
chr1	16892913	A	G	0.00441	NBPF1	-	FALSE
chr1	113673737	A	G	0.00798		.	FALSE	AluSx1	SINE,Alu
chr1	15899549	T	C	0.00960	AGMAT	-	TRUE	AluSq2	SINE,Alu
chr1	26755303	A	G	0.00129	LIN28A	+	TRUE	AluSx1	SINE,Alu
chr1	145112414	T	C	0.00079	NBPF20,SEC22B	+	FALSE
chr1	11119950	G	A	4.66412E-05	SRM	-	FALSE
chr1	52381350	T	G	4.39398E-08	RAB3B	-	FALSE
chr3	196659884	G	T	0.00217	SENP5	+	FALSE
chr1	201845881	A	G	0.00422	IPO9	+	FALSE
chr1	225156655	C	T	0.00671	DNAH14	+	FALSE
chr2	37333930	T	C	0.00073	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr1	53289892	A	G	0.00178	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr2	272203	C	T	1.58440E-08	ACP1	+	FALSE
chr4	124237063	A	G	0.00876	SPATA5	+	TRUE	AluJr	SINE,Alu
chr2	201774342	T	C	0.00127		.	FALSE	AluSz	SINE,Alu
chr2	1637531	A	G	0.00664	PXDN	-	FALSE
chr3	41281407	G	T	0.00288	CTNNB1	+	FALSE
chr1	19543352	T	C	0.00098	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	54691906	C	G	0.00465	SSBP3	-	FALSE
chr1	26128521	A	G	0.00251	SEPN1	+	TRUE	AluJb	SINE,Alu
chr1	10042937	A	G	2.41028E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	37331116	T	C	0.00286		.	FALSE	AluSx1	SINE,Alu
chr19	58375195	A	G	0.00080	ZNF587	+	TRUE	AluSx4	SINE,Alu
chr2	99813015	A	G	0.00235	MRPL30	+	TRUE	AluJb	SINE,Alu
chr20	62598815	C	T	0.00711	ZNF512B	-	FALSE
chr1	36067760	T	C	0.00024	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	144594232	C	T	2.29859E-05	NBPF20	+	FALSE
chr1	10519912	T	C	0.00185		.	FALSE	AluJr	SINE,Alu
chr4	39550612	T	C	0.00023	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr10	63954812	A	C	0.00641	RTKN2	-	FALSE
chr1	100150196	A	G	0.00176	PALMD	+	TRUE	AluJr	SINE,Alu
chr5	172461896	T	A	0.00335	ATP6V0E1	+	FALSE
chr1	33149260	A	G	0.00143	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	89525966	T	C	0.00039	GBP1	-	FALSE
chr1	10517276	T	C	0.00779		.	FALSE	AluJr	SINE,Alu
chr16	19715543	T	C	0.00879		.	FALSE	AluSg	SINE,Alu
chr5	10655842	C	T	0.00024	ANKRD33B	+	FALSE
chr1	70728523	A	G	0.00051	ANKRD13C	-	FALSE
chr2	232319610	A	T	0.00029	NCL	-	FALSE
chr2	207943813	G	T	0.00619	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr1	145688664	A	T	0.00013	NBPF20,NBPF10,RNF115	+	FALSE
chr3	52288956	A	T	0.00042	WDR82	-	FALSE
chr1	156675377	G	C	0.00935	CRABP2	-	FALSE
chr4	17804785	T	C	0.00083	DCAF16	-	TRUE	AluSx	SINE,Alu
chr19	33470874	A	G	0.00119	RHPN2	-	FALSE
chr1	206566195	C	T	0.00706	SRGAP2	+	FALSE
chr2	37518045	G	C	0.00342	PRKD3	-	FALSE
chr6	150047423	T	C	0.00688	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	24134721	T	C	0.00113	HMGCL	-	FALSE
chr1	145512951	A	G	0.00180	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	32535568	A	G	0.00192		.	FALSE	MER8	SINE,Alu
chr1	9643028	A	G	0.00017		.	FALSE	AluSx	SINE,Alu
chr1	45975279	T	C	0.00019	MMACHC	+	FALSE	AluSg7	SINE,Alu
chr1	1344893	A	G	7.94078E-08		.	FALSE	AluSg	SINE,Alu
chr1	33149414	A	G	0.00990	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	62628443	A	G	0.00359	PATJ	+	TRUE	AluSg4	SINE,Alu
chr2	219460472	T	C	0.00187	CNOT9	+	FALSE
chr2	37331525	T	C	0.00091		.	FALSE	AluJb	SINE,Alu
chr2	227659846	T	G	0.00653	IRS1	-	FALSE	G-rich	SINE,Alu
chr1	33148635	A	G	5.17667E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr6	42856158	A	G	0.00118	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	36067752	T	C	0.00123	PSMB2	-	TRUE	AluSz	SINE,Alu
chr14	53242859	T	C	9.31997E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr3	88103602	C	A	0.00284	CGGBP1	-	FALSE
chr5	178224547	A	G	0.00064	AACSP1	-	FALSE
chr1	32372360	C	T	0.00697	PTP4A2	-	FALSE	(CA)n	SINE,Alu
chr3	28390351	A	G	1.14010E-06	AZI2	-	FALSE
chr1	28826114	A	G	0.00264	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	46269545	G	A	0.00378	MAST2	+	FALSE
chr4	129795663	T	A	0.00165	JADE1	+	FALSE
chr6	166824702	C	T	0.00587	RPS6KA2	-	FALSE	(T)n	SINE,Alu
chr21	44331206	A	G	0.00167		.	FALSE	AluSz	SINE,Alu
chr1	200375846	G	T	0.00061	ZNF281	-	FALSE	(T)n	SINE,Alu
chr17	41133087	A	G	0.00141	RUNDC1	+	FALSE
chr11	76733943	A	G	0.00925	ACER3	+	FALSE	A-rich	SINE,Alu
chr20	279774	A	C	0.00056	ZCCHC3	+	FALSE	L2b	SINE,Alu
chr1	11979809	A	C	0.00836	KIAA2013	-	FALSE
chr1	1647814	T	C	7.10450E-06	CDK11B,CDK11A	-	FALSE
chr1	6730782	C	T	0.00807	DNAJC11	-	FALSE

RBP	RBM39
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR760EGM
Platform	HiSeq
Pubmed ID	32252787

RBM39 - Target Gene Network