RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	114940228	C	T	0.00127	TRIM33	-	FALSE	(T)n	SINE,Alu
chr10	119038371	C	T	0.00058	SLC18A2	+	FALSE	(ATTTGGCA)n	SINE,Alu
chr3	69026314	G	A	0.00881	EOGT	-	FALSE	AluSz6	SINE,Alu
chr2	217366919	A	G	0.00615		.	FALSE	AluSz6	SINE,Alu
chr1	21795388	A	G	0.00790	NBPF3	+	FALSE
chr5	32124827	G	T	0.00047	GOLPH3	-	FALSE
chr2	65496075	C	T	0.00972	ACTR2	+	FALSE
chr1	10519888	T	C	0.00986		.	FALSE	AluJr	SINE,Alu
chr3	122293773	A	T	0.00852	DTX3L	+	FALSE
chr1	100549600	G	T	0.00181	SASS6	-	FALSE
chr4	103718454	T	A	0.00446	LOC102723704,UBE2D3	+,-	FALSE
chr12	98943149	A	G	0.00019	TMPO	+	TRUE	AluSz	SINE,Alu
chr5	139931627	C	T	0.00073	SRA1	-	FALSE
chr1	117644949	C	G	0.00440	TTF2	+	FALSE
chr3	14986137	T	C	1.37684E-08	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	94343023	A	G	0.00363	DNTTIP2	-	FALSE
chr4	39551031	T	C	0.00068	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	54355105	A	G	0.00325	YIPF1	-	FALSE	MIRb	SINE,Alu
chr18	19445881	T	A	0.00224	MIB1	+	FALSE
chr3	100043289	C	T	0.00049	TBC1D23	+	FALSE
chr1	16909208	C	G	0.00482	NBPF1	-	FALSE
chr1	10517314	T	C	0.00073		.	FALSE	AluJr	SINE,Alu
chr1	28825337	A	G	0.00191	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	25894471	G	A	0.00778	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	109475569	A	G	0.00046	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr3	45721922	A	G	0.00181	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	27182750	G	C	0.00141		.	FALSE
chr1	45975266	A	G	0.00345	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	180247483	T	C	0.00167		.	FALSE
chr1	33148251	A	G	0.00389	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	179042580	A	G	0.00995	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr2	64119873	A	T	0.00492	VPS54	-	FALSE
chr5	139931633	C	A	0.00014	SRA1	-	FALSE
chr1	206566948	G	A	0.00228	SRGAP2	+	FALSE
chr1	65720330	A	C	0.00211		.	FALSE
chr1	168218543	A	G	0.00547		.	FALSE	AluSz	SINE,Alu
chr1	40923019	G	A	0.00019	ZFP69B	+	FALSE
chr1	32833541	T	C	0.00903	BSDC1	-	TRUE
chr6	42047404	A	G	0.00182	TAF8	+	TRUE	AluSz6	SINE,Alu
chr1	22400707	C	G	0.00158	CDC42	+	FALSE	AluSc8	SINE,Alu
chr1	143399333	T	A	0.00339		.	FALSE	L1MC4	SINE,Alu
chr19	42376711	A	G	5.78075E-06		.	FALSE	AluSp	SINE,Alu
chr2	48602186	A	G	0.00870	FOXN2	+	FALSE
chr1	21102502	C	A	0.00021	HP1BP3	-	FALSE
chr9	124094999	G	T	0.00764	GSN	+	FALSE	(TG)n	SINE,Alu
chr5	43575009	T	C	0.00498	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	28865502	G	A	0.00073	RCC1	+	FALSE
chr2	74090062	T	G	0.00248	STAMBP	+	FALSE
chr1	19543353	T	C	0.00377	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	48787633	T	C	0.00287	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr1	33149256	A	G	0.00010	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	33149486	A	G	0.00874	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr5	151041869	T	A	0.00305	SPARC	-	FALSE
chr1	10520180	T	C	0.00267		.	FALSE	AluSx	SINE,Alu
chr3	42592902	T	C	5.80731E-05	SEC22C	-	FALSE	AluJr	SINE,Alu
chr1	148595665	A	G	0.00062	NBPF15	+	TRUE	L1MC4	SINE,Alu
chr1	155106227	A	T	0.00137	EFNA1	+	FALSE
chr1	10517613	T	C	0.00375		.	FALSE	AluSx1	SINE,Alu
chr5	125962528	A	G	0.00924	PHAX	+	TRUE	AluSz	SINE,Alu
chr2	99812446	A	G	0.00461	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	171561203	T	G	0.00075	PRRC2C	+	FALSE
chr1	38155699	T	G	0.00734	C1orf109	-	FALSE	AluSx1	SINE,Alu
chr1	76229185	T	A	0.00280	ACADM	+	FALSE
chr1	32373563	G	A	0.00089	PTP4A2	-	FALSE
chr1	1662754	T	C	0.00107	SLC35E2	-	TRUE	AluY	SINE,Alu
chr1	47074462	A	G	0.00011	MOB3C	-	FALSE
chr2	675831	G	T	0.00731	TMEM18	-	FALSE
chr4	186081538	T	A	0.00077	CFAP97	-	FALSE
chr1	93599279	G	A	0.00849	MTF2	+	FALSE
chr2	174828621	A	C	0.00315	SP3	-	FALSE
chr1	19246181	A	G	1.12993E-05	IFFO2	-	FALSE
chr4	17804785	T	C	0.00273	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	1597356	G	C	0.00995	CDK11B,SLC35E2B	-	FALSE
chr1	62628606	A	G	0.00164	PATJ	+	TRUE	AluSg4	SINE,Alu
chrM	9988	T	C	0.00011		.	FALSE
chr16	88785189	T	C	0.00636	PIEZO1	-	TRUE	AluJr	SINE,Alu
chr1	114940211	G	T	0.00925	TRIM33	-	FALSE	(T)n	SINE,Alu
chr5	118175182	T	C	0.00205	DTWD2	-	TRUE	AluJr	SINE,Alu
chr1	21070971	G	A	0.00944	HP1BP3	-	FALSE
chr1	36068276	T	C	0.00339	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	79922263	T	G	0.00913	DHFR	-	FALSE	HAL1	SINE,Alu
chr6	24780892	A	C	0.00246	GMNN	+	FALSE
chr2	70452141	C	A	0.00191	TIA1	-	FALSE
chr1	33765752	G	A	0.00963	ZNF362	+	FALSE
chr3	48784500	T	A	0.00264	PRKAR2A	-	FALSE	(T)n	SINE,Alu
chr1	145688973	A	G	7.17653E-05	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr4	187628394	G	A	0.00000	FAT1	-	FALSE
chr1	116238056	G	A	0.00014	VANGL1	+	FALSE
chr1	880052	C	T	0.00231	NOC2L	-	FALSE
chr4	38945834	T	C	0.00287	FAM114A1	+	FALSE	AluSc	SINE,Alu
chr2	44114074	G	A	0.00246	LRPPRC	-	FALSE	AluSz6	SINE,Alu
chr2	98388811	C	G	0.00123	TMEM131	-	FALSE
chr1	32661615	A	T	0.00225	TXLNA	+	FALSE
chr1	110276861	T	C	0.00180	GSTM3	-	FALSE	LTR77	SINE,Alu
chr9	37503490	A	G	0.00612	POLR1E	+	TRUE	AluJb	SINE,Alu
chr9	136335345	G	A	0.00490	CACFD1	+	FALSE	(TG)n	SINE,Alu
chr3	194124421	A	G	0.00024	ATP13A3	-	FALSE
chr1	10517623	T	C	8.06723E-05		.	FALSE	AluSx1	SINE,Alu
chr19	7116734	A	T	0.00981	INSR	-	FALSE	(A)n	SINE,Alu
chr1	89887603	C	T	0.00308	GBP1P1	+	FALSE
chr1	10518756	T	C	0.00323		.	FALSE	AluSx1	SINE,Alu
chr1	26450101	A	G	0.00764	PDIK1L	+	FALSE
chr1	109780743	C	A	0.00643	SARS	+	FALSE
chr6	42855967	A	G	0.00151	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr19	65146	G	A	0.00761	WASH5P	-	FALSE
chr1	10517688	T	C	0.00020		.	FALSE	AluSx1	SINE,Alu
chr1	117531179	G	A	0.00116	PTGFRN	+	FALSE
chr3	52288956	A	T	0.00042	WDR82	-	FALSE
chr3	15483830	A	G	3.44106E-05	EAF1	+	FALSE
chr17	57279281	A	G	0.00918	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	87328403	A	T	0.00946	SEP15	-	FALSE
chr3	42643425	G	A	0.00482	NKTR	+	FALSE	L2a	SINE,Alu
chr5	31553968	T	C	0.00555	C5orf22	+	FALSE
chr1	20945264	A	C	0.00605	CDA	+	FALSE
chr5	52389815	A	G	0.00486	ITGA2	+	TRUE
chr1	97543764	C	T	0.00840	DPYD	-	FALSE
chr1	19934930	T	C	0.00026	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	52882970	A	G	0.00533	PRPF38A	+	FALSE
chr1	32799530	C	A	8.96009E-06	MARCKSL1	-	FALSE
chr20	25428588	A	G	0.00068	GINS1	+	TRUE	AluJb	SINE,Alu
chrX	77084042	T	C	0.00703	MAGT1	-	TRUE	AluSz	SINE,Alu
chr7	2473753	C	T	0.00806	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr19	14203874	A	C	0.00870	PRKACA	-	FALSE	(A)n	SINE,Alu
chr2	11426734	T	C	4.76290E-06	ROCK2	-	FALSE
chr8	56985607	C	T	0.00085	RPS20	-	FALSE
chr1	1344998	A	G	5.29904E-05		.	FALSE	AluSg	SINE,Alu
chr1	9163442	T	C	0.00235		.	FALSE	AluSp	SINE,Alu
chr15	38643574	T	C	0.00455	SPRED1	+	FALSE
chr1	22854702	C	T	5.42952E-11	ZBTB40	+	FALSE
chr1	16929279	G	A	0.00138	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr3	15114493	T	C	2.42944E-10	RBSN	-	TRUE	AluY	SINE,Alu
chr22	18572728	A	G	0.00050	PEX26	+	TRUE	AluYf1	SINE,Alu
chr16	2821989	C	T	0.00709	TCEB2	-	FALSE
chr2	42577806	T	A	0.00276	COX7A2L	-	FALSE
chr1	36068369	T	C	0.00511	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	174086933	C	A	0.00457	ZAK,MLK7-AS1	+,-	FALSE	AluJo	SINE,Alu
chr1	10519975	T	C	5.61936E-05		.	FALSE	AluJr	SINE,Alu
chr3	15780233	C	T	1.83528E-06	ANKRD28	-	FALSE	MER11B	SINE,Alu
chr1	19543356	T	C	0.00110	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	52520866	C	T	0.00108	TXNDC12	-	FALSE
chr4	2940085	T	C	8.20099E-05	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	157044418	G	C	0.00707		.	FALSE
chr4	120979178	T	C	0.00433		.	FALSE	AluSg4	SINE,Alu
chr1	16892275	C	T	0.00087	NBPF1	-	FALSE
chr2	71411977	T	A	0.00468	PAIP2B	-	FALSE
chr2	3592602	T	C	0.00232	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr2	27995238	G	A	0.00345	MRPL33	+	FALSE
chr4	89179595	T	C	0.00752	PPM1K	-	TRUE	AluSc	SINE,Alu
chr3	50150360	A	G	0.00827	RBM5	+	TRUE	AluSx	SINE,Alu
chr1	93616202	T	C	0.00194	TMED5	-	FALSE
chr1	149913513	T	C	0.00495	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr17	4929863	A	G	0.00597	KIF1C	+	TRUE	AluJb	SINE,Alu
chr8	23290112	T	C	0.00121	ENTPD4	-	TRUE	AluY	SINE,Alu
chr1	70718276	G	T	0.00836		.	FALSE
chr2	46612338	T	G	0.00018	EPAS1	+	FALSE
chr1	200375837	T	G	0.00490	ZNF281	-	FALSE	(T)n	SINE,Alu
chr5	135513089	T	A	7.47633E-06	SMAD5	+	FALSE
chr1	186332550	A	T	0.00328	TPR	-	FALSE
chr1	154454628	T	C	0.00099	SHE	-	TRUE	AluSq2	SINE,Alu
chr6	31112484	C	T	0.00538		.	FALSE
chr1	36068231	T	C	0.00935	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	204301752	G	C	0.00029	RAPH1	-	FALSE
chr1	206579936	A	G	0.00974	SRGAP2	+	FALSE
chr1	36068237	T	C	0.00867	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	6748659	T	C	0.00032	PAPD7	+	FALSE
chr1	53289940	A	G	0.00245	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	19586501	A	G	0.00119	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	38975953	T	A	0.00432	SRSF7	-	FALSE
chr2	216225584	G	T	0.00848	FN1	-	FALSE
chr1	51873951	G	A	0.00588	EPS15	-	FALSE
chr3	12940346	G	A	0.00411	IQSEC1	-	FALSE
chr1	67874270	G	A	0.00019	SERBP1	-	FALSE
chr1	173457017	C	T	0.00036	PRDX6	+	FALSE
chr6	3021448	T	C	0.00126	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr4	170037423	G	T	0.00802	SH3RF1	-	FALSE
chr6	42855979	A	G	8.12389E-06	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	15755248	C	T	0.00405	EFHD2	+	FALSE
chr6	33679439	A	C	0.00192	UQCC2	-	FALSE
chr12	15035081	T	C	0.00951	MGP	-	FALSE
chr1	201939479	T	A	0.00645	TIMM17A	+	FALSE
chr1	16932845	T	G	0.00732	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr5	92956173	C	T	0.00646	FAM172A	-	FALSE
chr1	566933	A	G	3.50078E-05		.	FALSE
chr1	179044216	A	G	0.00277	FAM20B	+	TRUE	AluSx	SINE,Alu
chr6	43747964	G	A	0.00542	VEGFA	+	FALSE
chr2	39010088	A	G	0.00192		.	FALSE	AluSp	SINE,Alu
chr1	6683578	T	C	0.00151	PHF13	+	FALSE
chr14	105270478	G	T	0.00252	ZBTB42	+	FALSE
chr1	116609185	G	A	0.00187	SLC22A15	+	FALSE
chr1	25894466	A	C	0.00783	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr3	112299732	A	G	0.00189	SLC35A5	+	FALSE
chr8	11701485	T	C	0.00027	CTSB	-	TRUE	AluSx1	SINE,Alu
chr11	44641025	G	A	0.00850	CD82	+	FALSE
chr1	85785548	C	T	0.00350	DDAH1	-	FALSE
chr1	26161107	A	T	0.00022	AUNIP	-	FALSE	AluSc8	SINE,Alu
chr1	19542310	T	C	2.12437E-06	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	16933642	G	A	0.00679	NBPF1	-	FALSE	GA-rich	SINE,Alu
chrX	3526615	G	T	0.00820	PRKX	-	FALSE
chr1	1469546	G	A	0.00331	ATAD3A	+	FALSE
chr6	29910583	C	T	4.95604E-05		.	FALSE
chr5	135382989	G	C	7.70449E-09	TGFBI	+	FALSE
chr1	6282224	T	C	0.00062	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	155161702	G	C	0.00020	MUC1	-	FALSE
chr1	53289852	A	G	0.00894	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	24999463	G	T	0.00012	SRRM1	+	FALSE	(T)n	SINE,Alu
chr1	179326879	A	G	0.00232	SOAT1	+	TRUE	AluJo	SINE,Alu
chr12	124146073	A	G	0.00085	GTF2H3	+	FALSE	AluSx4	SINE,Alu
chr1	47184569	G	C	0.00509	EFCAB14	-	FALSE
chr1	26152604	T	C	0.00954	MTFR1L	+	FALSE	AluSz6	SINE,Alu
chr16	88709698	C	T	0.00330	CYBA	-	FALSE
chr19	41097276	C	G	0.00188	SHKBP1	+	FALSE
chr1	16890130	A	C	0.00412	NBPF1	-	FALSE
chr15	86290940	A	C	1.28576E-05	AKAP13	+	FALSE
chr1	24989266	A	T	0.00392	SRRM1	+	FALSE
chr2	10933249	C	T	0.00889	PDIA6	-	FALSE
chr1	65298626	T	A	0.00580	RAVER2	+	FALSE	X12_DNA	SINE,Alu
chr19	33882222	G	A	0.00236	PEPD	-	FALSE
chr1	241796949	G	A	0.00053	OPN3,CHML	-	FALSE
chr8	12286546	A	G	0.00400	FAM86B2	-	FALSE
chr1	230975454	A	G	0.00438	C1orf198	-	FALSE
chr1	19585207	G	A	0.00672	MRTO4	+	FALSE
chr16	74656352	T	C	0.00187	RFWD3	-	TRUE	AluJb	SINE,Alu
chr14	20940606	G	A	0.00710	PNP	+	FALSE
chr5	150827303	T	G	0.00718	SLC36A1	+	FALSE
chr4	128758175	A	G	0.00385		.	FALSE	AluSx	SINE,Alu
chr4	128756656	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr5	151041876	G	T	5.29152E-05	SPARC	-	FALSE
chr11	65267608	A	G	0.00038	MALAT1	+	FALSE
chr1	36690599	A	G	0.00406	THRAP3	+	FALSE
chr5	25415881	T	C	0.00911		.	FALSE
chr1	17733268	T	C	0.00472	RCC2	-	FALSE
chr1	87573963	T	C	0.00787	HS2ST1	+	FALSE
chr1	6582868	T	C	0.00368	NOL9	-	TRUE	AluSg	SINE,Alu
chr1	47142538	G	A	7.23026E-06	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr9	127711532	T	C	0.00018	SCAI	-	TRUE	AluSp	SINE,Alu
chr2	70316226	A	C	0.00426	PCBP1	+	FALSE
chr6	18264355	G	A	0.00872	DEK	-	FALSE
chr1	220871123	A	G	0.00854	C1orf115	+	FALSE
chr1	10520067	T	C	2.08449E-05		.	FALSE	AluSx	SINE,Alu
chr7	22984967	A	G	0.00108	FAM126A	-	FALSE
chr3	10192717	A	G	3.16601E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	11084103	T	A	0.00044	TARDBP	+	FALSE
chr2	198416722	A	T	0.00970	HSPE1-MOB4,MOB4	+	FALSE
chr3	179506482	A	G	0.00017	USP13	+	FALSE	MER33	SINE,Alu
chr1	153782688	G	T	0.00032	GATAD2B	-	FALSE
chr5	137891109	C	G	0.00031	HSPA9	-	FALSE
chr1	93297607	C	T	0.00016	RPL5	+	FALSE
chr7	64023371	T	C	0.00824	ZNF680	-	FALSE
chr1	26755136	A	G	0.00279	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	6582701	T	C	1.54245E-05	NOL9	-	TRUE	AluSg	SINE,Alu
chr1	46165408	T	C	0.00106	IPP	-	TRUE	FRAM	SINE,Alu
chr1	36024788	C	T	2.88658E-15	NCDN	+	FALSE
chr7	20178460	T	C	6.50978E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr7	44918728	T	C	0.00192	PURB	-	TRUE	AluSg	SINE,Alu
chr1	27107650	T	A	3.71504E-05	ARID1A	+	FALSE
chr1	145693958	A	G	3.55543E-06	NBPF20,NBPF10	+	TRUE	AluSz	SINE,Alu
chr12	92537721	A	T	0.00057	BTG1	-	FALSE
chr7	86816663	A	G	0.00103	DMTF1	+	TRUE	AluJr	SINE,Alu
chr3	10320968	T	A	0.00237	TATDN2	+	FALSE
chr1	145512951	A	G	0.00180	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr17	5377119	A	T	0.00043	DERL2	-	FALSE	FLAM_C	SINE,Alu
chr1	19542250	T	C	0.00780	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	3597974	T	C	1.93309E-05	RNASEH1	-	FALSE
chr20	43996145	T	A	0.00611	SYS1-DBNDD2,SYS1	+	FALSE
chr7	102277600	T	C	0.00240	POLR2J2,UPK3BL	-	TRUE	AluSc	SINE,Alu
chr1	91486839	T	C	0.00329	ZNF644	-	FALSE
chr3	196670094	G	C	0.00669	NCBP2-AS2	+	FALSE
chr1	789050	G	A	0.00449	LINC01128	+	FALSE
chr1	36067925	T	C	4.53272E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	45279898	C	T	0.00271		.	FALSE	(TCTT)n	SINE,Alu
chr3	73431830	A	G	0.00157	PDZRN3	-	FALSE
chr1	16932495	A	C	0.00385	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr16	70284570	A	C	0.00028	EXOSC6	-	FALSE	AluSx	SINE,Alu
chr5	56177848	T	A	0.00986	MAP3K1	+	FALSE
chr1	165631670	T	G	0.00197	ALDH9A1	-	FALSE
chr1	27481039	A	G	0.00021	SLC9A1	-	FALSE
chr1	220231347	T	C	2.85871E-07	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	145509493	A	G	0.00264	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr10	60047611	G	A	0.00855	CISD1	+	FALSE	(A)n	SINE,Alu
chr1	95712458	C	A	0.00135	RWDD3	+	FALSE
chr1	32697109	A	G	0.00015	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	155058663	G	A	0.00300	EFNA3	+	FALSE
chr1	28864435	A	G	0.00088	RCC1	+	FALSE
chr3	107763040	G	A	1.74111E-05	CD47	-	FALSE
chr5	149364145	A	G	0.00383	SLC26A2	+	TRUE	AluSc8	SINE,Alu
chr1	143399198	C	T	0.00146		.	FALSE
chr2	128951904	A	G	0.00444	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	1593857	T	C	0.00424	CDK11B,SLC35E2B	-	FALSE
chr1	19953120	G	A	0.00212	MINOS1,MINOS1-NBL1	+	FALSE
chr1	155214017	C	A	0.00946	GBA	-	FALSE	AluSx3	SINE,Alu
chr19	46053370	T	C	0.00045	OPA3	-	TRUE	AluSx1	SINE,Alu
chr17	49042381	T	C	0.00931	SPAG9	-	TRUE	AluJb	SINE,Alu
chr3	45721827	C	A	0.00142	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr13	110407579	T	G	0.00751	IRS2	-	FALSE	(T)n	SINE,Alu
chr2	25962254	A	T	0.00375	ASXL2	-	FALSE
chr1	235392546	T	C	0.00312	ARID4B	-	FALSE
chr17	49041827	T	C	0.00125	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	10042911	A	G	0.00043	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	69688901	T	C	0.00503	AAK1	-	TRUE	AluSq2	SINE,Alu
chr1	12072783	C	A	0.00914	MFN2	+	FALSE
chr1	10517352	T	C	0.00311		.	FALSE	AluJr	SINE,Alu
chr1	27338911	C	T	0.00455	FAM46B	-	FALSE
chr1	179326278	A	G	0.00379	SOAT1	+	TRUE
chr2	201842323	T	C	0.00390	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	52375424	T	C	0.00109	RAB3B	-	FALSE
chr4	120219638	A	T	0.00970	C4orf3	-	FALSE
chr19	583145	G	A	0.00227	BSG	+	FALSE
chr1	28904397	C	G	0.00125	TRNAU1AP	+	FALSE
chr1	179989742	G	C	9.63603E-05	CEP350	+	FALSE
chr1	53291395	A	G	0.00017	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	159946779	G	A	0.00019	LINC01133	+	FALSE	(GAAA)n	SINE,Alu
chr3	15113893	T	C	0.00042	RBSN	-	TRUE	AluSz6	SINE,Alu
chr10	61548859	A	C	0.00011	CCDC6	-	FALSE
chr17	49041866	T	C	0.00153	SPAG9	-	TRUE	AluSx	SINE,Alu
chr3	23959343	A	T	0.00116	RPL15	+	FALSE
chr12	101295434	A	G	0.00695	ANO4	+	FALSE
chr1	10368092	A	C	0.00945	KIF1B	+	FALSE
chr12	125511242	A	G	0.00015	THRIL	-	FALSE	AluSx1	SINE,Alu
chr6	109784327	T	C	2.38076E-05	MICAL1,ZBTB24	-	TRUE	AluSg	SINE,Alu
chr1	160920966	C	T	0.00980	ITLN2	-	FALSE
chr2	179371305	A	G	0.00696	MIR548N	+	FALSE
chr19	63721	T	G	0.00602	WASH5P	-	FALSE
chr1	89522646	G	C	0.00027	GBP1	-	FALSE
chr1	6283264	T	C	0.00521	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	145284134	G	C	0.00203	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr7	17384440	A	G	0.00373	AHR	+	TRUE	AluSx	SINE,Alu
chr8	30536606	T	C	0.00017	GSR	-	TRUE	AluSp	SINE,Alu
chr5	37290400	T	C	0.00282		.	FALSE	AluSz	SINE,Alu
chr1	16909220	T	C	0.00449	NBPF1	-	FALSE
chr4	38946758	G	A	0.00294	FAM114A1	+	FALSE
chr1	11979815	A	C	0.00072	KIAA2013	-	FALSE
chr3	15113783	T	C	0.00127	RBSN	-	FALSE	AluSz6	SINE,Alu
chr1	36186320	T	C	0.00281		.	FALSE	AluSg	SINE,Alu
chr1	38327542	T	C	0.00068	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr2	239972080	T	A	0.00136	HDAC4	-	FALSE
chr1	31426815	A	G	0.00797	PUM1	-	FALSE
chr2	164466037	A	T	0.00090	FIGN	-	FALSE
chr1	12164538	G	A	8.95385E-07	TNFRSF8	+	FALSE
chr2	204301760	C	T	0.00313	RAPH1	-	FALSE
chr2	172178680	T	C	9.91686E-05	METTL8	-	TRUE	AluSx3	SINE,Alu
chr3	148748198	G	A	3.62985E-05	HLTF	-	FALSE
chr1	226172221	T	C	0.00118	SDE2	-	FALSE	L1MEf	SINE,Alu
chr2	219146868	T	C	0.00764	PNKD,TMBIM1	+,-	FALSE
chr5	139680027	A	G	0.00155	PFDN1	-	FALSE
chr4	185549875	A	T	0.00616	CASP3	-	FALSE
chr1	112170151	A	G	0.00137	RAP1A	+	FALSE	L1ME4a	SINE,Alu
chr1	1309885	A	G	0.00010	AURKAIP1	-	FALSE
chr1	145512098	A	G	0.00707	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	153782011	C	T	0.00913	GATAD2B	-	FALSE
chr2	1636957	A	T	0.00589	PXDN	-	FALSE
chr1	154128836	A	T	0.00090	TPM3	-	FALSE
chr1	19542250	T	C	0.00859	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr8	146280802	C	T	0.00492	C8orf33	+	FALSE	LTR13	SINE,Alu
chr2	37331038	T	C	0.00261		.	FALSE	AluSx1	SINE,Alu
chr2	203744240	T	C	0.00595		.	FALSE	AluSx	SINE,Alu
chr10	22825288	G	A	0.00051	PIP4K2A	-	FALSE
chr1	78142856	T	C	0.00086	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr5	34906547	T	C	0.00051	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	120165038	A	G	0.00926	ZNF697	-	FALSE
chr1	26308882	A	G	3.99595E-05	PAFAH2	-	FALSE
chr10	75009781	T	C	9.15447E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr3	53268235	A	C	0.00452	TKT	-	FALSE
chr1	6682037	G	A	0.00302	PHF13	+	FALSE
chr1	36535403	A	G	0.00320		.	FALSE	AluSx1	SINE,Alu
chr2	37331750	T	C	0.00067		.	FALSE	AluJb	SINE,Alu
chr12	56632550	G	A	0.00027	ANKRD52	-	FALSE
chr3	195242526	C	T	3.14972E-05	PPP1R2	-	FALSE
chrX	77084017	T	C	0.00179	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	16889414	T	C	0.00012	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr4	248783	A	G	0.00901	ZNF876P	+	FALSE	L1MA3	SINE,Alu
chr7	143003524	G	T	3.66232E-05	CASP2	+	FALSE	AluY	SINE,Alu
chr1	36067838	T	C	0.00348	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	207247477	T	C	2.68116E-05	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr1	153587256	A	T	0.00013	S100A14	-	FALSE
chr2	26399214	G	A	0.00187	GAREM2	+	FALSE
chr1	20826781	C	T	1.74444E-05	MUL1	-	FALSE
chr1	93827764	A	G	0.00053	DR1	+	FALSE
chr1	10517276	T	C	0.00779		.	FALSE	AluJr	SINE,Alu
chr1	113672691	A	G	0.00515		.	FALSE	AluJb	SINE,Alu
chr19	42753649	G	C	0.00723	ERF	-	FALSE
chr2	120022385	C	T	0.00184	STEAP3	+	FALSE
chr4	77082799	G	C	0.00148	SCARB2	-	FALSE
chr19	59095126	G	T	0.00303	CENPBD1P1	+	FALSE
chr15	59952905	A	G	0.00150	BNIP2	-	FALSE
chr2	24224040	A	G	0.00882		.	FALSE	AluSp	SINE,Alu
chr1	162497739	G	C	0.00138	UHMK1	+	FALSE
chr1	67874689	T	C	0.00896	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	45959759	T	C	0.00818	FYCO1	-	FALSE
chr1	245006499	C	G	0.00171	COX20	+	FALSE
chr1	179829401	T	C	0.00118	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr3	184429718	A	G	0.00914	MAGEF1	-	FALSE
chr5	140720886	A	G	0.00980	PCDHGA1,PCDHGA2	+	FALSE

RBP	TROVE2
Knock-Method	shRNA
RBP Family	TROVE
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR060KRD
Platform	HiSeq
Pubmed ID	32252787

TROVE2 - Target Gene Network