RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	111489899	C	A	0.00041	LRIF1	-	FALSE
chr5	177577138	T	C	0.00163	NHP2	-	FALSE
chr4	17628548	A	G	0.00991		.	FALSE	AluSz	SINE,Alu
chr1	16935130	C	T	0.00288	NBPF1	-	FALSE
chr1	10519912	T	C	5.10285E-06		.	FALSE	AluJr	SINE,Alu
chr2	206982257	T	C	0.00023		.	FALSE	AluSg7	SINE,Alu
chr6	31321883	G	A	0.00000		.	FALSE
chr1	158424898	G	A	0.00153		.	FALSE
chr1	24086807	T	C	0.00352	TCEB3	+	FALSE	(T)n	SINE,Alu
chr1	28607959	C	A	0.00215	SESN2	+	FALSE
chr3	40503557	T	C	0.00746	RPL14	+	FALSE
chr4	10099340	T	C	0.00000	WDR1	-	FALSE
chr19	3467756	C	T	0.00485	NFIC	+	FALSE	(TA)n	SINE,Alu
chr1	67874731	T	C	0.00565	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	15993603	G	A	0.00103		.	FALSE	AluSx4	SINE,Alu
chr1	86118417	T	G	0.00653	ZNHIT6	-	FALSE
chr1	25894460	T	A	0.00520	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr2	38971640	A	C	0.00050	SRSF7	-	FALSE
chr1	36068294	T	C	0.00321	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	99813015	A	G	0.00235	MRPL30	+	TRUE	AluJb	SINE,Alu
chr3	11596302	T	C	0.00110	ATG7	+	FALSE
chr1	28661736	A	G	0.00048	MED18	+	TRUE	AluSg	SINE,Alu
chr1	46075664	A	G	0.00267	NASP	+	TRUE	AluSx4	SINE,Alu
chr17	16344882	T	G	0.00060	LRRC75A-AS1	+	FALSE	AluJb	SINE,Alu
chr1	148004307	T	C	0.00935	NBPF8	-	FALSE
chr1	19953130	T	A	0.00595	MINOS1,MINOS1-NBL1	+	FALSE
chr11	118661811	T	G	0.00582	DDX6	-	FALSE
chr12	51325237	A	G	5.73531E-05	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr3	49396588	T	C	0.00239	RHOA	-	FALSE
chr5	53841241	T	A	0.00372	SNX18	+	FALSE
chr1	109465171	T	A	0.00989	GPSM2	+	FALSE
chr1	45976268	G	A	0.00168	MMACHC	+	FALSE
chr7	2294401	A	G	0.00035	SNX8	-	FALSE
chr2	38971641	T	A	0.00071	SRSF7	-	FALSE
chr1	53290057	A	G	0.00142	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr5	139931626	T	G	0.00490	SRA1	-	FALSE
chr2	206987108	T	C	0.00015		.	FALSE	AluSx	SINE,Alu
chr6	53363500	G	T	0.00684	GCLC	-	FALSE
chr6	26095642	A	G	0.00332		.	FALSE	AluY	SINE,Alu
chr1	10517567	T	C	0.00578		.	FALSE	AluSx1	SINE,Alu
chr12	133298069	A	G	6.69127E-09	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	27874481	C	A	0.00046	AHDC1	-	FALSE
chr11	124954212	C	A	0.00827	SLC37A2	+	FALSE
chr2	206983087	T	C	0.00364		.	FALSE	AluJb	SINE,Alu
chr6	52868087	T	C	0.00594	ICK	-	TRUE	MER135	SINE,Alu
chr2	37331855	C	T	0.00965		.	FALSE	L1MC4	SINE,Alu
chr1	193054575	C	G	0.00029	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr1	28826085	A	G	0.00281	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr12	54634306	T	C	0.00616	CBX5	-	TRUE	AluJr	SINE,Alu
chr1	227845283	C	A	0.00809	ZNF678	+	FALSE
chr2	86249906	T	C	0.00352	LOC90784	-	TRUE	AluJr	SINE,Alu
chr2	33046027	G	C	0.00397	TTC27	+	FALSE
chr1	33148635	A	G	5.38540E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr3	196558949	A	G	6.63189E-10	PAK2	+	FALSE
chr17	421931	T	C	0.00260	VPS53	-	TRUE	AluSx	SINE,Alu
chr1	32661594	C	T	0.00528	TXLNA	+	FALSE	(T)n	SINE,Alu
chr12	133298428	A	G	7.41792E-11	PGAM5	+	TRUE	AluSp	SINE,Alu
chr5	125961426	A	G	0.00434	PHAX	+	TRUE	AluSz6	SINE,Alu
chr14	50792837	A	G	0.00550	ATP5S	+	TRUE	AluSx	SINE,Alu
chr4	84525974	T	C	0.00255	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr5	93018903	T	A	5.97109E-08	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr4	89181477	T	C	7.00483E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	25663918	G	A	0.00951	RSRP1	-	FALSE
chr5	102345546	A	C	0.00463	PAM	+	FALSE
chr1	183187603	C	T	0.00357	LAMC2	+	FALSE
chr1	9163096	T	C	0.00185		.	FALSE	FRAM	SINE,Alu
chr1	200375848	C	T	0.00586	ZNF281	-	FALSE	(T)n	SINE,Alu
chr7	33060946	A	G	0.00542	NT5C3A	-	FALSE
chr1	67874849	T	C	0.00266	SERBP1	-	TRUE	AluSx	SINE,Alu
chr6	74133990	T	C	0.00201		.	FALSE	AluY	SINE,Alu
chr5	134236206	A	G	0.00065	TXNDC15	+	TRUE	AluSq	SINE,Alu
chr1	116235186	A	G	0.00054	VANGL1	+	FALSE
chr1	28661656	A	G	0.00106	MED18	+	TRUE	AluSg	SINE,Alu
chr1	16912138	A	G	0.00197	NBPF1	-	FALSE
chr1	53291395	A	G	0.00017	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr4	39780672	C	A	0.00743	UBE2K	+	FALSE
chr1	28261658	T	G	0.00280	SMPDL3B	+	FALSE
chr6	13788297	T	C	0.00979	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	28865502	G	A	0.00531	RCC1	+	FALSE
chr1	16929148	G	A	0.00037	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr1	205320515	A	G	0.00022	KLHDC8A	-	FALSE
chr6	42856905	A	G	4.80826E-12	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	120539691	G	T	0.00350	NOTCH2	-	FALSE
chr1	28261664	T	A	7.89583E-05	SMPDL3B	+	FALSE
chr4	170643973	C	T	0.00232	CLCN3	+	FALSE
chr1	26143725	A	T	0.00291	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	40537924	G	A	0.00404	CAP1	+	FALSE	(A)n	SINE,Alu
chr2	183643905	A	T	0.00113	DNAJC10	+	FALSE
chr1	15993013	G	A	1.61862E-10		.	FALSE
chr20	25427856	A	G	0.00094	GINS1	+	FALSE	AluSz	SINE,Alu
chr17	65334753	T	C	4.53868E-08	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	67874252	C	A	0.00558	SERBP1	-	FALSE
chr16	75479467	T	C	0.00160	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	19543247	T	C	4.83051E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	15094061	G	A	0.00188	MRPS25	-	FALSE
chr14	23300642	C	A	0.00266	MRPL52	+	FALSE	MIRb	SINE,Alu
chr15	49454018	C	T	0.00053	GALK2	+	FALSE	AluSx1	SINE,Alu
chr1	94351062	T	A	0.00676	GCLM	-	FALSE
chr7	937828	G	A	0.00605	ADAP1	-	FALSE
chr1	1419823	A	G	0.00816	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	109239334	A	T	0.00035	PRPF38B	+	FALSE
chr1	185014720	A	G	0.00989	RNF2	+	FALSE
chr1	222802926	C	T	0.00035	MIA3	+	FALSE
chr1	3545186	T	G	0.00314	TPRG1L	+	FALSE
chr1	70728523	A	G	0.00051	ANKRD13C	-	FALSE
chr1	9160989	T	C	0.00092		.	FALSE	AluJb	SINE,Alu
chr2	37429627	A	G	7.56792E-05	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr6	43582895	A	G	0.00983	POLH	+	TRUE	AluSx1	SINE,Alu
chr1	26611197	C	T	0.00814	UBXN11	-	FALSE
chr2	114352179	G	A	1.68965E-05	WASH2P	+	FALSE
chr1	19585519	A	G	6.02134E-06	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr17	57279171	A	G	0.00063	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	21780000	G	T	0.00153	NBPF3	+	FALSE	ERVL-E-int	SINE,Alu
chr1	173834149	A	C	0.00265	GAS5	-	FALSE	AluSz	SINE,Alu
chr2	37328034	T	C	1.98403E-05		.	FALSE
chr1	95362953	T	C	0.00072	CNN3	-	FALSE
chr1	201846675	C	T	0.00146	IPO9	+	FALSE
chr22	39259541	A	G	0.00134	CBX6	-	FALSE
chr1	114306369	A	T	0.00834	RSBN1	-	FALSE
chr5	130540368	A	C	0.00420	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr1	9642828	T	A	0.00148	SLC25A33	+	FALSE
chr1	1653093	A	G	0.00642	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr1	212254067	G	A	0.00714	DTL	+	FALSE
chr1	225974614	A	G	0.00209	SRP9	+	TRUE	AluJr	SINE,Alu
chr1	15818081	T	C	9.65448E-05	CASP9	-	TRUE	AluJb	SINE,Alu
chr1	11847902	C	A	0.00364	C1orf167,MTHFR	+,-	FALSE
chr1	6283439	T	C	0.00786	ICMT	-	TRUE	AluSx3	SINE,Alu
chr5	174955746	G	C	0.00768	SFXN1	+	FALSE
chr11	16771525	T	C	0.00014	C11orf58	+	FALSE
chr6	114181220	A	G	0.00265	MARCKS	+	FALSE
chr1	19670860	A	G	0.00419	CAPZB	-	FALSE
chr3	183861243	A	G	0.00049	EIF2B5	+	FALSE
chr1	1252513	T	C	0.00670	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	150937960	G	C	0.00014	CERS2	-	FALSE	G-rich	SINE,Alu
chr1	3697550	C	A	0.00078	LRRC47	-	FALSE	AluSc	SINE,Alu
chr15	59954723	T	A	0.00043	BNIP2	-	FALSE
chr2	37330614	T	C	0.00410		.	FALSE	AluSq2	SINE,Alu
chr12	54526562	A	T	0.00119	LOC400043	+	FALSE	L2a	SINE,Alu
chr1	92862337	A	G	0.00595		.	FALSE	AluSp	SINE,Alu
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr4	128758152	A	G	0.00198		.	FALSE	AluSx	SINE,Alu
chr1	20976843	G	C	0.00202	PINK1,PINK1-AS	+,-	FALSE
chr1	87379498	T	G	0.00784	SEP15	-	FALSE
chr1	45244432	T	A	0.00154		.	FALSE
chr6	150046603	T	C	0.00763	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	33961147	T	G	0.00236	ZSCAN20	+	FALSE
chr1	10093457	C	T	0.00777	UBE4B	+	FALSE
chr1	118066459	A	G	0.00360	MAN1A2	+	FALSE
chr1	16890176	A	C	0.00753	NBPF1	-	FALSE
chr5	76371820	A	G	0.00162		.	FALSE
chr2	61764920	C	A	0.00662	XPO1	-	FALSE
chr2	170497653	T	G	0.00587		.	FALSE
chr1	38002068	C	T	0.00962	SNIP1	-	FALSE
chr1	6683581	A	C	0.00504	PHF13	+	FALSE
chr3	5257981	T	A	3.55991E-06	EDEM1	+	FALSE	(ATTTT)n	SINE,Alu
chr1	89649369	T	C	0.00333	GBP4	-	TRUE	AluJb	SINE,Alu
chr1	46164678	T	C	0.00773	IPP	-	TRUE	AluJb	SINE,Alu
chr2	72968440	T	A	0.00138	EXOC6B	-	FALSE
chr1	16060892	C	T	0.00946	PLEKHM2	+	FALSE
chr1	32508478	C	T	0.00509	KHDRBS1	+	FALSE
chr1	24289896	T	G	0.00051	PNRC2	+	FALSE
chrX	77084038	T	C	0.00265	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	36068370	T	C	3.60077E-09	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	130537666	A	G	9.26326E-06	LYRM7	+	TRUE	AluJb	SINE,Alu
chr1	11084103	T	A	0.00162	TARDBP	+	FALSE
chr1	158065762	C	T	0.00310	KIRREL	+	FALSE
chr1	212273639	C	T	0.00710	DTL	+	FALSE
chr11	76637680	G	A	0.00011	ACER3	+	FALSE
chr1	205686522	G	T	0.00427	NUCKS1	-	FALSE
chrX	23721458	T	A	0.00413		.	FALSE	AluSc8	SINE,Alu
chr11	73387540	G	A	0.00438	RAB6A	-	FALSE
chr1	3545192	C	G	0.00600	TPRG1L	+	FALSE
chr5	140798639	G	C	3.89156E-05	PCDHGA1,PCDHGA2,PCDHGA3,PCDHGB1,PCDHGA4,PCDHGB2,PCDHGA5,PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB4,PCDHGA8,PCDHGB5,PCDHGA9,PCDHGB6,PCDHGA10,PCDHGB7	+	FALSE
chr9	21863621	C	A	0.00123	MTAP	+	FALSE	AluY	SINE,Alu
chr16	80636297	C	G	0.00161	CDYL2	-	FALSE
chr5	43575020	T	C	8.37337E-06	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr2	37330487	T	C	0.00840		.	FALSE	AluSq2	SINE,Alu
chr1	16932809	C	T	0.00887	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr3	172365720	C	T	3.67728E-06	NCEH1	-	FALSE
chr1	54571380	A	G	0.00332	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr1	114443574	A	G	0.00162	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	183218870	G	T	0.00338	NMNAT2	-	FALSE
chr3	16357708	A	G	0.00098	RFTN1	-	FALSE
chr1	16912085	T	C	0.00206	NBPF1	-	FALSE
chr4	128758175	A	G	0.00385		.	FALSE	AluSx	SINE,Alu
chr1	206566195	C	T	0.00052	SRGAP2	+	FALSE
chr1	1419678	A	G	0.00558	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	46828700	A	G	0.00095	NSUN4	+	FALSE
chr4	57801150	A	T	0.00462	REST	+	FALSE
chr15	65442592	T	C	8.95444E-05	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	205687344	C	T	0.00633	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	145688961	A	G	0.00324	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	220231254	T	C	0.00376	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	155695960	A	G	1.11424E-05	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	225974592	T	G	2.09928E-05	SRP9	+	FALSE	AluJr	SINE,Alu
chr2	118589029	T	G	0.00058	DDX18	+	FALSE
chr1	149818508	T	C	7.96693E-05		.	FALSE	MLT1D	SINE,Alu
chr1	10519947	T	C	0.00184		.	FALSE	AluJr	SINE,Alu
chr1	100657416	C	T	0.00228	DBT	-	FALSE	AluJb	SINE,Alu
chr1	228682330	C	G	0.00509	RNF187	+	FALSE
chr7	44918804	T	C	0.00015	PURB	-	TRUE	AluSg	SINE,Alu
chrX	123045103	A	G	0.00996	XIAP	+	TRUE	AluSp	SINE,Alu
chr5	149363392	A	G	0.00531	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr1	36322433	G	A	0.00663	AGO4	+	FALSE
chr2	216903620	T	C	0.00623	PECR	-	TRUE	AluSx3	SINE,Alu
chr1	10043053	A	G	0.00042	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr5	14769103	G	A	0.00104	ANKH	-	FALSE
chr3	138121198	C	T	0.00076	MRAS	+	FALSE
chr16	10625050	T	C	1.54421E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr4	2940358	G	A	2.85215E-10	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	84971969	G	T	0.00626	GNG5	-	FALSE
chr10	88951001	G	A	0.00033	FAM35A	+	FALSE
chr1	29095757	G	T	0.00739	YTHDF2	+	FALSE
chr1	6314743	C	T	6.72719E-05	GPR153	-	FALSE
chr1	114449662	T	C	0.00223	DCLRE1B	+	FALSE
chr7	157129834	C	G	1.26796E-05	DNAJB6	+	FALSE
chr1	32697063	T	C	0.00035	EIF3I	+	FALSE	AluSp	SINE,Alu
chr12	69237057	A	G	0.00259	MDM2	+	TRUE
chr5	121362875	A	G	0.00652	SRFBP1	+	TRUE	FRAM	SINE,Alu
chr1	16889423	G	C	6.70783E-10	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr1	23885230	C	G	0.00075	ID3	-	FALSE
chr2	61277835	A	G	0.00105	PEX13	+	TRUE	AluY	SINE,Alu
chr1	31344628	T	A	0.00085	SDC3	-	FALSE
chr11	63394016	T	C	0.00106	ATL3	-	FALSE
chr8	42883403	A	G	0.00204	HOOK3	+	TRUE	AluJb	SINE,Alu
chr1	36067817	T	C	1.59583E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	33138549	G	A	0.00612	GLB1	-	FALSE
chr1	19542463	T	C	0.00111	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr19	42375540	A	G	0.00012		.	FALSE	AluSx	SINE,Alu
chr1	28825331	A	G	1.84239E-05	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr17	26672364	C	G	0.00645	TNFAIP1	+	FALSE
chr3	122283290	G	C	0.00029	DTX3L,PARP9	+,-	FALSE
chr5	149823794	G	T	0.00204	RPS14	-	FALSE
chr1	36386905	G	T	0.00065	AGO1	+	FALSE
chr4	39549693	T	C	0.00170	UGDH-AS1,SMIM14	+,-	FALSE	AluSp	SINE,Alu
chr1	145323656	A	T	0.00593	NBPF20,NBPF10	+	FALSE
chr14	50792966	A	T	0.00852		.	FALSE	AluSx	SINE,Alu
chr1	46159809	T	A	0.00605	TMEM69	+	FALSE
chr3	12942851	C	G	0.00013	IQSEC1	-	FALSE
chr1	36068295	T	C	0.00058	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	155868177	G	A	7.38851E-05	RIT1	-	FALSE
chr16	15023271	G	A	0.00403		.	FALSE
chr1	36806071	G	A	0.00126	STK40	-	FALSE
chr17	65335477	T	C	2.02482E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	94352553	C	T	0.00136	GCLM	-	FALSE	AluSx1	SINE,Alu
chr2	191556849	A	T	0.00158	NAB1	+	FALSE
chr1	28661656	A	G	0.00026	MED18	+	TRUE	AluSg	SINE,Alu
chr1	19585903	G	A	0.00522	MRTO4	+	FALSE	AluJr	SINE,Alu
chr16	10623639	T	C	0.00392	EMP2	-	TRUE	AluSp	SINE,Alu
chr2	206986945	T	C	0.00414		.	FALSE	AluJr	SINE,Alu
chr12	32532505	G	A	0.00385		.	FALSE
chr2	37331560	T	C	6.28398E-05		.	FALSE	AluJb	SINE,Alu
chr6	109001952	A	G	0.00978	FOXO3	+	FALSE	(A)n	SINE,Alu
chr1	231398555	A	G	0.00401	GNPAT	+	FALSE
chr1	32799439	C	T	0.00239	MARCKSL1	-	FALSE
chr1	114226056	C	A	0.00883	MAGI3	+	FALSE
chr19	37073373	T	C	0.00492	ZNF529,ZNF529-AS1	+,-	FALSE	AluY	SINE,Alu
chr14	53109810	T	C	0.00463	ERO1A	-	TRUE	MER53	SINE,Alu
chr1	93603188	A	G	0.00374	MTF2	+	FALSE
chr1	31405694	G	A	0.00986	PUM1	-	FALSE
chr1	3730400	T	C	0.00894	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	53289547	A	G	0.00352	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr2	70506337	T	C	0.00313	PCYOX1	+	FALSE
chr1	42693597	A	G	0.00106	FOXJ3	-	FALSE
chr7	6501836	A	C	0.00081	KDELR2	-	FALSE
chr2	217366868	A	G	0.00100		.	FALSE	AluSz6	SINE,Alu
chr16	87440117	C	T	1.93168E-06	ZCCHC14	-	FALSE
chr12	106460001	G	A	2.23324E-05	NUAK1	-	FALSE
chr1	19984109	T	G	0.00872	MINOS1-NBL1,NBL1	+	FALSE
chr3	183890868	A	G	5.00274E-08	DVL3	+	FALSE	L2	SINE,Alu
chr8	41399648	A	G	0.00037	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr15	31619607	G	A	0.00887	KLF13	+	FALSE
chr1	19934930	T	C	0.00026	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr8	48890293	A	G	0.00125	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	93298756	T	C	0.00264	FAM69A,RPL5	+,-	FALSE	MER5C	SINE,Alu
chr1	121133995	G	C	0.00575	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	100440553	A	G	9.79324E-05	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	36068052	G	T	1.69686E-12	PSMB2	-	FALSE	L1ME4b	SINE,Alu
chr4	39550978	T	C	0.00023	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr5	125961611	A	G	0.00113	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	16933623	G	A	0.00789	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	101442569	C	A	0.00567	SLC30A7	+	FALSE
chr3	66430372	T	A	0.00300	LRIG1	-	FALSE
chr1	1252687	T	C	0.00459	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	10520487	T	C	0.00638		.	FALSE	AluSx1	SINE,Alu
chr1	53712569	C	A	0.00061	LRP8	-	FALSE	(CA)n	SINE,Alu
chr19	18306990	G	C	0.00090	MPV17L2	+	FALSE
chr1	204526611	A	G	0.00402	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	53288862	A	G	0.00570	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	322711	A	G	0.00149		.	FALSE
chr10	13234356	A	T	3.19668E-07	MCM10	+	FALSE
chr5	34906661	T	C	9.12853E-06	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	161932324	A	G	0.00104	ATF6	+	FALSE
chr1	168220364	A	G	6.18665E-05		.	FALSE	AluSz6	SINE,Alu
chr1	36068237	T	C	0.00867	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	148004548	T	C	0.00220	NBPF8	-	FALSE
chr16	48387238	A	G	0.00013	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr1	179832748	G	C	7.50400E-12	TOR1AIP2	-	FALSE	FLAM_C	SINE,Alu
chr2	37328097	T	C	3.71887E-07		.	FALSE
chr5	122359499	C	A	0.00277	PPIC	-	FALSE	(AC)n	SINE,Alu
chr17	57279257	A	G	0.00077	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	16890630	T	G	0.00147	NBPF1	-	FALSE
chr3	99515750	A	G	0.00216	MIR548G	-	FALSE
chr4	2940438	T	C	0.00151	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	67518534	C	T	0.00682	SLC35D1	-	FALSE
chrX	123046598	A	G	0.00371	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	38326661	T	C	0.00023	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	16932368	T	A	0.00336	NBPF1	-	FALSE	MLT1F-int	SINE,Alu
chr1	2113565	T	G	0.00429	PRKCZ	+	FALSE
chr1	27992824	G	A	0.00503	IFI6	-	FALSE
chr1	9416568	C	T	0.00061	SPSB1	+	FALSE
chr13	46700519	C	A	0.00089	LCP1	-	FALSE
chr17	76117147	G	A	0.00606	TMC6	-	FALSE
chr5	149363219	A	G	0.00866	SLC26A2	+	FALSE	AluJr	SINE,Alu
chr1	33149495	A	G	0.00421	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr14	23795222	T	G	0.00162	BCL2L2-PABPN1,PABPN1	+	FALSE
chr1	19542679	T	C	1.36514E-06	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr1	86118685	G	A	0.00440	ZNHIT6	-	FALSE
chr2	242512138	A	G	7.67847E-06	BOK	+	FALSE
chr15	90627429	T	C	0.00013	IDH2	-	FALSE
chr1	225707043	T	C	2.18813E-07	ENAH	-	FALSE
chr1	1419690	A	G	0.00464	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr2	86249961	T	C	0.00067	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	10517513	T	C	0.00982		.	FALSE	AluSx1	SINE,Alu
chr1	33149414	A	G	0.00990	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	115248084	C	T	0.00171	NRAS	-	FALSE
chr3	43098969	T	G	0.00596	FAM198A	+	FALSE	L1ME3G	SINE,Alu
chr1	10519951	T	C	0.00499		.	FALSE	AluJr	SINE,Alu
chr1	92865902	A	G	0.00040		.	FALSE	AluJr	SINE,Alu
chr2	109383604	G	A	0.00331	RANBP2	+	FALSE
chr1	28825418	A	G	0.00725	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr3	32207907	T	C	0.00922	GPD1L	+	FALSE
chr7	6501833	A	T	0.00032	KDELR2	-	FALSE
chr1	3546132	G	A	0.00113	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	82453022	A	G	0.00532	ADGRL2	+	FALSE
chr5	38904482	G	A	0.00048	OSMR	+	FALSE
chr8	22995145	T	C	3.53807E-06	TNFRSF10D	-	FALSE
chr1	77759578	A	G	0.00031	AK5	+	FALSE
chr3	100083426	C	T	0.00908	TOMM70	-	FALSE	FAM	SINE,Alu
chr2	174090339	A	C	2.67746E-05	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	38327700	T	C	0.00509	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr8	48890247	A	G	2.58682E-14	MCM4	+	TRUE	AluJb	SINE,Alu
chr3	195243007	A	C	3.91570E-06	PPP1R2	-	FALSE
chr1	1653046	T	A	0.00986	CDK11B,CDK11A	-	FALSE
chr1	164473	T	C	0.00152		.	FALSE	AluSq2	SINE,Alu
chr2	172179003	T	C	0.00192	METTL8	-	TRUE	AluY	SINE,Alu
chr12	27574182	G	C	0.00014	ARNTL2,ARNTL2-AS1	+,-	FALSE
chr1	25894468	C	G	0.00357	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	24862649	A	G	0.00074	RCAN3	+	FALSE
chr1	788840	T	C	0.00299	LINC01128	+	FALSE
chr19	23542193	T	C	0.00099	ZNF91	-	TRUE	AluY	SINE,Alu
chr1	148009510	G	A	1.20657E-06	NBPF8	-	FALSE
chr2	239972080	T	A	0.00136	HDAC4	-	FALSE
chr2	64119875	G	A	0.00781	VPS54	-	FALSE
chrX	123046695	A	G	0.00054	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	241794056	C	A	0.00753	OPN3,CHML	-	FALSE
chr1	150937963	A	G	0.00658	CERS2	-	FALSE	G-rich	SINE,Alu
chr2	240954110	A	G	0.00605	NDUFA10	-	FALSE
chr2	37330391	T	C	0.00134		.	FALSE	AluSq2	SINE,Alu
chr1	10519982	T	C	0.00129		.	FALSE	AluJr	SINE,Alu
chr17	72784932	G	A	0.00444	TMEM104	+	FALSE
chr3	101405564	G	A	0.00354		.	FALSE
chr12	125267857	T	C	0.00702	SCARB1	-	TRUE	FRAM	SINE,Alu
chr1	169824104	G	A	0.00744	SCYL3	-	FALSE
chr1	36068231	T	C	0.00121	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	12877522	A	T	0.00956	RPL32	-	FALSE
chr1	85488830	T	C	0.00137	MCOLN3	-	TRUE	AluJr	SINE,Alu
chr1	1337735	T	G	3.46713E-05	MRPL20	-	FALSE
chr1	175914284	A	G	0.00036	RFWD2	-	FALSE
chr4	119551832	G	A	0.00522	LOC729218	+	FALSE
chr14	64951277	T	C	0.00077	ZBTB25	-	TRUE	AluSp	SINE,Alu
chr1	75171751	T	C	0.00563	CRYZ	-	FALSE
chr1	245017464	T	A	0.00314	HNRNPU,SNORA100	-	FALSE
chr19	50410816	G	T	0.00050	IL4I1,NUP62	-	FALSE	AluSz	SINE,Alu
chr1	28825370	A	G	0.00617	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	10221287	A	G	0.00961	UBE4B	+	FALSE
chr5	149829072	G	T	0.00816	RPS14	-	FALSE
chr1	144931330	C	T	0.00295	NBPF20,PDE4DIP	+,-	FALSE
chr1	145689798	A	G	0.00200	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	10368092	A	C	0.00945	KIF1B	+	FALSE
chr5	125961667	A	G	1.34346E-05	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	36068364	T	C	0.00013	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	42591446	A	G	0.00012	SEC22C	-	FALSE
chr1	149818472	T	C	0.00131		.	FALSE	MLT1D	SINE,Alu
chr1	234744480	G	A	0.00409	IRF2BP2	-	FALSE
chr1	10520684	T	C	0.00842	DFFA	-	TRUE	AluSc8	SINE,Alu
chr8	140475147	C	T	0.00719		.	FALSE
chr1	152884246	G	T	0.00536	IVL	+	FALSE
chr1	3546137	A	C	0.00778	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr4	120219638	A	T	0.00970	C4orf3	-	FALSE
chr1	46075709	A	G	0.00431	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	110913120	C	T	0.00627	SLC16A4	-	FALSE
chr1	46033497	T	C	0.00719	AKR1A1	+	FALSE	AluYk3	SINE,Alu
chr1	16913612	G	A	0.00581	NBPF1	-	FALSE
chr8	11701343	T	C	0.00280	CTSB	-	TRUE	AluSx1	SINE,Alu
chr2	86249961	T	C	0.00262	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	220231959	T	C	0.00464	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	155039464	C	T	2.82294E-06	EFNA4	+	FALSE
chr7	148700783	G	A	0.00557	PDIA4	-	FALSE
chr7	100031495	C	T	0.00475	MEPCE	+	FALSE
chr1	19586520	A	G	6.58771E-06	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	37331025	T	C	0.00029		.	FALSE	AluSx1	SINE,Alu
chr1	161932324	A	G	0.00356	ATF6	+	FALSE
chr1	2160988	G	A	0.00137	SKI	+	FALSE
chr1	9328120	A	G	0.00386	H6PD	+	TRUE	AluJr	SINE,Alu
chr16	10626624	T	C	0.00334	EMP2	-	FALSE	(T)n	SINE,Alu
chr12	69237053	A	G	0.00331	MDM2	+	TRUE
chr5	178508569	C	T	0.00571	ZNF354C	+	FALSE
chr1	36067760	T	C	1.59237E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr17	26955330	A	C	0.00291	KIAA0100	-	FALSE
chr2	208619699	A	G	0.00741	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr1	35251229	G	A	0.00516	GJB3	+	FALSE
chr1	54692674	A	G	0.00864	SSBP3	-	FALSE
chr1	1650845	G	A	0.00094	CDK11B,CDK11A	-	FALSE
chr4	2940091	T	C	0.00212	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr12	56215097	A	T	0.00051	DNAJC14	-	FALSE
chr15	91044377	T	C	0.00440	IQGAP1	+	FALSE
chr8	12880299	A	G	1.70760E-05	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr21	33032035	T	A	1.90109E-05	SOD1	+	FALSE
chr1	179811337	C	A	0.00670	TOR1AIP2	-	FALSE	AluSp	SINE,Alu
chr1	43391826	G	T	0.00202	SLC2A1	-	FALSE
chr1	155829140	C	G	0.00889	GON4L	-	FALSE
chr3	40577745	A	G	0.00044	ZNF621	+	TRUE	AluSz	SINE,Alu
chr10	24873171	G	T	0.00329	ARHGAP21	-	FALSE
chr19	10602447	C	T	0.00878	KEAP1	-	FALSE
chr2	197004439	A	G	0.00034	STK17B	-	FALSE

RBP	WDR43
Knock-Method	shRNA
RBP Family	Utp12
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR341PZW
Platform	HiSeq
Pubmed ID	32252787

WDR43 - Target Gene Network