RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	36534024	A	G	0.00635		.	FALSE	FLAM_A	SINE,Alu
chr5	122165503	A	T	0.00170	SNX2	+	FALSE	(AC)n	SINE,Alu
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr1	19234174	A	G	0.00046	IFFO2	-	FALSE
chr1	209605643	A	C	0.00590	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chr16	71681515	A	G	0.00308	PHLPP2	-	FALSE
chr1	109818162	T	C	0.00316	CELSR2	+	FALSE
chr5	9546451	G	A	0.00030	SNHG18	+	FALSE
chr1	145283733	A	G	0.00458	NBPF20,NOTCH2NL	+	FALSE
chr11	6703160	A	T	0.00111	MRPL17	-	FALSE
chr1	214557685	C	A	0.00205	PTPN14	-	FALSE
chr9	140729536	C	A	0.00699	EHMT1	+	FALSE
chr1	31344952	C	T	0.00842	SDC3	-	FALSE
chr1	21671943	T	G	0.00471	ECE1	-	FALSE	(GCTCCCG)n	SINE,Alu
chr8	143352206	T	C	0.00500	TSNARE1	-	FALSE
chr1	16891340	T	A	0.00724	NBPF1	-	FALSE
chr1	160990875	T	C	9.42851E-06	F11R	-	FALSE
chr1	53711735	G	C	0.00884	LRP8	-	FALSE
chr10	102308801	G	C	0.00127	HIF1AN	+	FALSE	(GT)n	SINE,Alu
chr17	55761035	G	A	0.00125	MSI2	+	FALSE
chr3	194124624	C	T	0.00502	ATP13A3	-	FALSE
chr2	206981835	T	C	0.00047		.	FALSE	AluJb	SINE,Alu
chr8	30536583	T	C	0.00031	GSR	-	TRUE	AluSp	SINE,Alu
chr5	37290413	T	C	0.00467		.	FALSE	AluSz	SINE,Alu
chr2	183643905	A	T	0.00113	DNAJC10	+	FALSE
chr1	211918115	C	T	7.42155E-06	LPGAT1	-	FALSE	MER63D	SINE,Alu
chr1	19543456	T	C	0.00760	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	197611125	A	G	0.00948		.	FALSE	AluSx1	SINE,Alu
chr3	183861243	A	G	0.00049	EIF2B5	+	FALSE
chr1	201845899	G	T	1.72907E-05	IPO9	+	FALSE
chr17	49042206	T	C	0.00030	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	54565296	A	G	0.00623	TCEANC2	+	TRUE	AluSx1	SINE,Alu
chr15	41591451	A	G	1.78515E-09	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	143189486	A	G	0.00122	LOC102723769	-	FALSE
chr1	119427687	G	C	0.00823	TBX15	-	FALSE
chr2	171634349	T	A	0.00104	ERICH2	+	FALSE
chr1	156518379	G	A	0.00498	IQGAP3	-	FALSE
chr5	40832555	A	T	5.95918E-06	RPL37	-	FALSE
chr1	28825331	A	G	0.00024	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	16574382	A	C	0.00704	FBXO42	-	FALSE
chrX	77084017	T	C	0.00179	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	33149256	A	G	0.00286	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr12	125511960	A	G	6.81205E-06	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	146643580	G	A	0.00113	PRKAB2	-	FALSE
chr12	69237056	A	G	0.00372	MDM2	+	TRUE
chr1	46076533	A	G	0.00832	NASP	+	TRUE	AluSx	SINE,Alu
chr1	16912029	C	G	0.00268	NBPF1	-	FALSE
chr1	91990450	A	T	0.00614	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr1	36068370	T	C	0.00846	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	12677525	G	A	0.00122	DHRS3	-	FALSE	(A)n	SINE,Alu
chr1	24293612	G	A	0.00366		.	FALSE
chr1	155838369	G	C	0.00346	SYT11	+	FALSE
chr16	88789699	A	C	0.00936	PIEZO1	-	FALSE
chr1	160967754	T	C	0.00563	F11R	-	TRUE	(T)n	SINE,Alu
chr2	29135468	C	G	0.00262	WDR43	+	FALSE
chr2	28639641	C	G	0.00431		.	FALSE
chr8	94744813	C	T	5.22032E-05	RBM12B	-	FALSE
chr19	9672943	T	C	1.63385E-06		.	FALSE	AluSx3	SINE,Alu
chr7	29962666	T	A	0.00077	SCRN1	-	FALSE
chr4	120982045	T	C	0.00293	MAD2L1	-	FALSE
chrX	2824933	T	C	0.00066	ARSD	-	TRUE	AluSx1	SINE,Alu
chr3	88191439	A	C	0.00657	CGGBP1,ZNF654	+,-	FALSE
chr1	46164678	T	C	0.00773	IPP	-	TRUE	AluJb	SINE,Alu
chr1	204525744	A	G	0.00010	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	32373563	G	A	0.00089	PTP4A2	-	FALSE
chr1	206579936	A	G	0.00974	SRGAP2	+	FALSE
chr1	16929327	C	T	5.08143E-05	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	16889866	G	A	0.00051	NBPF1	-	FALSE
chr3	121382204	C	T	0.00309	GOLGB1	-	FALSE
chr1	36068370	T	C	0.00067	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	17998	C	T	0.00995	WASH7P	-	FALSE
chr1	17320251	G	A	0.00367	ATP13A2	-	FALSE
chr5	96498783	G	A	0.00056	RIOK2	-	FALSE
chr1	173457017	C	T	0.00036	PRDX6	+	FALSE
chr8	61534428	A	G	0.00274	RAB2A	+	FALSE
chr3	179117241	T	C	0.00133	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	36068166	T	C	0.00686	PSMB2	-	TRUE	AluSc	SINE,Alu
chr4	119555142	A	G	4.95460E-05	LOC729218	+	FALSE
chrM	9756	G	A	0.00315		.	FALSE
chr1	160966299	T	C	0.00033	F11R	-	TRUE	AluSg	SINE,Alu
chr19	44418680	G	C	0.00066	ZNF45	-	FALSE
chr6	107113955	A	G	0.00265	QRSL1	+	TRUE	AluSg	SINE,Alu
chr1	214529302	C	T	0.00331	PTPN14	-	FALSE	AluJb	SINE,Alu
chr4	2940164	T	C	0.00381	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	100489992	A	G	0.00297	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr11	65179819	T	C	0.00038	FRMD8	+	FALSE
chr1	6314743	C	T	6.72719E-05	GPR153	-	FALSE
chr6	160113872	A	G	0.00863	SOD2	-	FALSE
chr2	37330587	T	C	0.00112		.	FALSE	AluSq2	SINE,Alu
chr5	156905300	A	C	0.00870	ADAM19	-	FALSE	MER92B	SINE,Alu
chr6	3022725	T	C	0.00081	HTATSF1P2	-	TRUE	AluSz	SINE,Alu
chr1	10517300	T	C	0.00113		.	FALSE	AluJr	SINE,Alu
chr1	1718810	G	A	5.85228E-05	GNB1	-	FALSE
chr5	149829071	T	C	0.00360	RPS14	-	FALSE
chr1	44088547	C	A	0.00927	PTPRF	+	FALSE	A-rich	SINE,Alu
chr12	98942696	A	G	3.06836E-07	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	19655758	T	A	0.00044	PQLC2	+	FALSE	AluSz	SINE,Alu
chr1	10521254	T	C	0.00041	DFFA	-	TRUE	AluY	SINE,Alu
chr1	9160989	T	C	0.00041		.	FALSE	AluJb	SINE,Alu
chr3	194361676	C	T	0.00378	LSG1	-	FALSE	MSTA	SINE,Alu
chr19	1863170	G	A	0.00204	KLF16	-	FALSE
chr2	191556844	T	C	0.00024	NAB1	+	FALSE
chr1	206580084	C	G	0.00104	SRGAP2	+	FALSE
chr1	203713133	G	A	0.00984	ATP2B4	+	FALSE
chr1	28835934	A	G	0.00566	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	1252513	T	C	0.00223	CPSF3L	-	TRUE	AluSp	SINE,Alu
chrX	84532996	T	G	0.00801	POF1B	-	FALSE
chr1	10520702	T	C	0.00438	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	148004307	T	C	0.00935	NBPF8	-	FALSE
chr1	11979807	C	A	0.00574	KIAA2013	-	FALSE
chr17	57281058	A	G	0.00061	PRR11	+	TRUE	AluSz	SINE,Alu
chr15	59954723	T	A	0.00043	BNIP2	-	FALSE
chr5	40832551	A	T	0.00394	RPL37	-	FALSE
chr6	132780768	G	A	0.00668	STX7	-	FALSE
chr1	31732603	A	C	0.00148	SNRNP40	-	FALSE
chr1	23636274	G	T	0.00032	HNRNPR	-	FALSE
chr1	28785729	G	A	0.00181	PHACTR4	+	FALSE
chr1	220231982	T	C	0.00328	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	35648712	G	A	0.00298	SFPQ	-	FALSE
chr1	154323598	T	A	0.00198	ATP8B2	+	FALSE	(TA)n	SINE,Alu
chr2	86850798	A	G	0.00267	RNF103-CHMP3,RNF103	-	FALSE
chr1	28826118	A	G	0.00175	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	26449341	A	G	0.00622	PDIK1L	+	FALSE
chr1	29631909	A	G	0.00029	PTPRU	+	FALSE
chr1	26755175	G	C	0.00211	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	949608	G	A	0.00235	ISG15	+	FALSE
chr9	132268359	A	G	0.00436	LINC00963	+	TRUE	AluJb	SINE,Alu
chr14	19686329	G	A	0.00117	DUXAP10	+	FALSE
chr1	94335333	G	T	0.00510	DNTTIP2	-	FALSE
chr2	11323079	T	A	0.00586	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr1	36787880	C	T	0.00023	EVA1B	-	FALSE
chr1	19953130	T	A	0.00595	MINOS1,MINOS1-NBL1	+	FALSE
chr12	72096335	A	G	1.07858E-05	TMEM19	+	FALSE	AluSz6	SINE,Alu
chr16	81064494	A	G	8.13539E-06	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	173860808	A	G	0.00042		.	FALSE	FLAM_A	SINE,Alu
chr3	72426071	T	A	0.00169	RYBP	-	FALSE	(T)n	SINE,Alu
chr6	30593890	A	G	0.00584		.	FALSE
chr9	137332311	T	G	0.00036	RXRA	+	FALSE
chr1	1549354	G	A	0.00132		.	FALSE	HAL1	SINE,Alu
chr2	202152108	A	G	0.00018	CASP8	+	FALSE	AluJb	SINE,Alu
chr1	16939857	C	T	0.00542	NBPF1	-	FALSE
chr2	3609064	G	A	0.00194	RNASEH1-AS1	+	FALSE	MER33	SINE,Alu
chr1	36068294	T	C	0.00321	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	108714298	T	C	0.00967	PJA2	-	FALSE
chr2	204301757	C	T	0.00999	RAPH1	-	FALSE
chr1	110023610	G	A	0.00636	SYPL2	+	FALSE
chr2	217366534	A	G	0.00700		.	FALSE	AluSz	SINE,Alu
chr6	109784327	T	C	2.38076E-05	MICAL1,ZBTB24	-	TRUE	AluSg	SINE,Alu
chr16	89630630	C	T	0.00296	RPL13	+	FALSE
chr1	114515717	G	A	0.00018	HIPK1	+	FALSE
chr12	60173406	C	T	0.00708	SLC16A7	+	FALSE
chr6	138413269	A	G	0.00743	PERP	-	FALSE
chr4	95588274	G	A	0.00095	PDLIM5	+	FALSE
chr2	65496144	A	G	0.00883	ACTR2	+	FALSE
chr9	19376249	G	T	5.55883E-05		.	FALSE
chr2	112252626	A	C	0.00048	MIR4435-2HG	-	FALSE
chr1	145369709	A	G	0.00073	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	115259768	T	C	0.00156	CSDE1	-	FALSE
chr1	9326888	T	C	0.00887	H6PD	+	FALSE	AluSx1	SINE,Alu
chr1	36529575	A	G	2.40551E-05		.	FALSE	AluJr	SINE,Alu
chr5	138705183	T	A	9.01084E-05	PAIP2,SLC23A1	+,-	FALSE
chr1	148252049	A	C	0.00666	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	16889127	A	G	0.00213	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr5	140594466	G	A	0.00209	PCDHB13	+	FALSE
chr1	44685732	T	C	8.08877E-10	DMAP1	+	FALSE
chr1	193054576	T	C	0.00068	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr3	48556339	G	A	6.87729E-06	PFKFB4	-	FALSE
chr1	10521130	T	C	0.00807	DFFA	-	TRUE	AluY	SINE,Alu
chr1	36068281	T	C	0.00201	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	155695960	A	G	1.11424E-05	DAP3	+	TRUE	AluSp	SINE,Alu
chr12	57923211	A	C	0.00071	MBD6	+	FALSE	(C)n	SINE,Alu
chr19	18477761	A	G	0.00461	PGPEP1	+	TRUE	AluJb	SINE,Alu
chr1	10518688	T	C	0.00154		.	FALSE	AluSx1	SINE,Alu
chr8	97506373	C	G	0.00579	SDC2	+	FALSE	(CCCCGAG)n	SINE,Alu
chr7	128607384	G	A	0.00925	TNPO3	-	FALSE
chr10	70742774	A	T	0.00504	DDX21	+	FALSE
chr3	195694448	C	T	0.00025	SDHAP1	-	FALSE
chr15	83659319	A	T	0.00130	FAM103A1,C15orf40	+,-	FALSE
chr17	5288081	C	T	0.00518	RABEP1	+	FALSE
chr1	36067784	T	C	2.18848E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr19	17414126	C	T	0.00029	ABHD8	-	FALSE
chr3	141012493	C	A	0.00249	PXYLP1	+	FALSE	MER58A	SINE,Alu
chr3	93846831	G	A	0.00547		.	FALSE	AluSq2	SINE,Alu
chr1	190234133	A	C	5.13910E-06	BRINP3	-	FALSE
chr5	125961667	A	G	1.34346E-05	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	16932429	C	G	0.00076	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	9163393	T	C	0.00327		.	FALSE	AluSp	SINE,Alu
chr7	44618353	T	C	0.00168	TMED4	-	TRUE	AluSq2	SINE,Alu
chr16	10625102	T	C	0.00129	EMP2	-	TRUE	AluSx3	SINE,Alu
chr9	136209400	A	G	0.00328	MED22	-	FALSE
chr1	10520296	T	C	0.00299		.	FALSE	AluSx	SINE,Alu
chr1	23636452	A	G	0.00294	HNRNPR	-	FALSE
chr4	39551008	T	C	0.00017	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr4	17802919	T	C	0.00857	DCAF16	-	TRUE	AluSz	SINE,Alu
chr4	248996	A	G	0.00123	ZNF876P	+	TRUE	AluYk3	SINE,Alu
chr1	242012149	C	T	0.00334	EXO1	+	FALSE
chr1	53291344	A	G	0.00088	ZYG11B	+	FALSE	(A)n	SINE,Alu
chr15	44751338	G	A	0.00374	CTDSPL2	+	FALSE
chr5	37290435	T	C	8.22232E-07		.	FALSE	AluSz	SINE,Alu
chr5	68505909	A	G	0.00178	CENPH	+	TRUE	AluSx3	SINE,Alu
chr2	55516937	G	T	0.00250	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr17	53239140	C	T	0.00954	STXBP4	+	FALSE	MIR	SINE,Alu
chr1	46164493	T	C	0.00977	IPP	-	TRUE	AluJb	SINE,Alu
chr1	27992799	T	A	0.00014	IFI6	-	FALSE	FAM	SINE,Alu
chr1	85785548	C	T	0.00220	DDAH1	-	FALSE
chr1	145116027	T	C	1.71852E-07	NBPF20,SEC22B	+	FALSE
chr1	32479707	G	A	0.00000	KHDRBS1	+	FALSE
chr16	15794023	A	G	4.91052E-06	NDE1	+	TRUE	AluSz6	SINE,Alu
chr14	53109810	T	C	0.00463	ERO1A	-	TRUE	MER53	SINE,Alu
chrX	3526658	A	T	0.00152	PRKX	-	FALSE	(AC)n	SINE,Alu
chr1	145689492	A	G	0.00075	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr14	74526952	T	C	0.00019	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr1	27634734	G	A	0.00978	WDTC1	+	FALSE
chr1	160967938	T	C	0.00270	F11R	-	TRUE	AluSp	SINE,Alu
chr3	179117128	T	C	0.00276	GNB4	-	TRUE	AluSz	SINE,Alu
chr8	144357975	C	T	0.00444	GLI4	+	FALSE
chr1	156499969	T	C	8.53229E-06	IQGAP3	-	FALSE
chr17	10578246	A	G	0.00093		.	FALSE
chr11	94863483	C	T	0.00501	ENDOD1	+	FALSE
chr3	112720122	T	A	0.00679	GTPBP8	+	FALSE
chr14	75202512	A	G	0.00053	FCF1	+	TRUE	AluSc	SINE,Alu
chr4	153701130	C	T	2.11271E-05	ARFIP1	+	FALSE
chr1	1345002	A	G	0.00141		.	FALSE	AluSg	SINE,Alu
chr4	66439707	T	C	0.00148	EPHA5	-	FALSE
chr1	115259543	C	T	0.00492	CSDE1	-	FALSE
chr14	75203097	A	G	1.28940E-05	FCF1	+	TRUE	AluSx	SINE,Alu
chr1	148556087	G	C	0.00106		.	FALSE
chr1	21810575	T	C	0.00827	NBPF3	+	FALSE
chr12	123253851	A	G	0.00470	DENR	+	FALSE	(AT)n	SINE,Alu
chr2	241825926	T	C	7.75373E-05	C2orf54	-	FALSE
chr6	42856954	A	G	0.00037	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr5	21883662	T	G	0.00108	CDH12	-	FALSE
chr3	148748198	G	A	3.62985E-05	HLTF	-	FALSE
chr1	28662199	A	G	7.40709E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr3	156259299	T	C	0.00097	SSR3	-	TRUE	AluSq2	SINE,Alu
chr2	37330487	T	C	0.00242		.	FALSE	AluSq2	SINE,Alu
chr2	176042866	A	T	0.00596	ATP5G3	-	FALSE
chr2	74332837	G	T	4.72839E-05	TET3	+	FALSE
chr2	85548076	A	T	0.00682	TGOLN2	-	FALSE
chr1	65694080	C	T	0.00442	AK4	+	FALSE	(TCCC)n	SINE,Alu
chr1	569981	C	A	4.36771E-05		.	FALSE
chr2	109301897	T	C	0.00306	LIMS1	+	FALSE
chr16	15023271	G	A	0.00403		.	FALSE
chr1	16890130	A	C	0.00594	NBPF1	-	FALSE
chr7	20178460	T	C	6.50978E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr6	42857031	A	G	0.00022	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	203426264	C	T	0.00948	BMPR2	+	FALSE
chr4	6925237	C	G	0.00870	TBC1D14	+	FALSE
chr2	224622242	T	C	0.00873	AP1S3	-	TRUE	AluSx1	SINE,Alu
chr1	36067925	T	C	0.00397	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	145513031	A	G	0.00713	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	113243096	G	T	0.00114	MOV10	+	FALSE
chr3	14986098	T	C	0.00000	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	179044206	A	G	0.00015	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	231468953	G	A	0.00085	EXOC8	-	FALSE
chr1	24296871	G	C	0.00733		.	FALSE	AluSg	SINE,Alu
chr2	55459824	C	T	0.00763	RPS27A	+	FALSE
chr3	44791547	T	C	0.00184	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr6	13790964	T	C	5.10728E-05	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr1	21808159	G	A	0.00011	NBPF3	+	FALSE
chr1	10367424	G	A	0.00286	KIF1B	+	FALSE	AluSx	SINE,Alu
chr1	53291434	A	G	0.00124	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	16889642	T	C	0.00017	NBPF1	-	TRUE
chr3	48787052	T	C	0.00866	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr7	64023437	A	G	0.00073	ZNF680	-	FALSE
chr7	152342999	T	C	0.00313		.	FALSE	FRAM	SINE,Alu
chr2	55452458	G	T	0.00113	CLHC1	-	FALSE
chr1	28661665	A	G	0.00808	MED18	+	TRUE	AluSg	SINE,Alu
chr1	10518734	T	C	0.00143		.	FALSE	AluSx1	SINE,Alu
chr1	110173775	G	T	0.00038	AMPD2	+	FALSE
chr5	140482871	T	G	0.00650	PCDHB3	+	FALSE
chr1	46269545	G	A	0.00378	MAST2	+	FALSE
chr1	36067858	G	A	0.00293	PSMB2	-	FALSE	AluSz	SINE,Alu
chr8	128944712	A	C	0.00033	PVT1	+	FALSE
chr1	33148691	A	G	0.00547	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr2	31557839	G	T	0.00014	XDH	-	FALSE	AluJr	SINE,Alu
chr2	198368113	T	A	1.78788E-05	HSPE1,HSPE1-MOB4	+	FALSE
chr6	31626580	G	A	0.00291		.	FALSE
chr2	188385337	C	T	0.00210	TFPI	-	FALSE	L1MC3	SINE,Alu
chr1	16901668	T	C	0.00177	NBPF1	-	FALSE
chr8	144332082	T	C	7.73207E-05	ZFP41	+	FALSE
chr1	16932931	C	A	0.00169	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr5	118174735	T	C	0.00046	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	148003752	T	C	3.77288E-10	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr8	11700737	T	C	0.00126	CTSB	-	TRUE	AluSg	SINE,Alu
chr14	75202722	A	G	0.00022	FCF1	+	TRUE	AluSc	SINE,Alu
chr7	24731065	C	T	0.00414	MPP6	+	FALSE	(TGTATG)n	SINE,Alu
chr2	37328008	T	C	1.98312E-07		.	FALSE
chr9	131457814	G	A	0.00021	SET	+	FALSE
chr1	145512081	A	G	0.00579	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	168218573	A	G	0.00202		.	FALSE	AluSz	SINE,Alu
chr1	17287301	A	G	0.00104	CROCC	+	FALSE
chr3	33481400	G	C	1.12603E-05	UBP1	-	FALSE
chr1	200521412	G	A	0.00292	KIF14	-	FALSE
chr1	10519951	T	C	0.00378		.	FALSE	AluJr	SINE,Alu
chr1	148004422	T	A	0.00017	NBPF8	-	FALSE
chr1	10521172	T	C	1.01590E-06	DFFA	-	TRUE	AluY	SINE,Alu
chr1	185069561	A	G	0.00675	RNF2	+	FALSE
chr2	24227357	A	G	0.00295		.	FALSE	AluSc	SINE,Alu
chr1	3548832	G	C	0.00464	WRAP73	-	FALSE
chr17	61502460	T	A	0.00161	TANC2	+	FALSE
chr1	109239335	G	T	0.00011	PRPF38B	+	FALSE
chr14	50361170	C	T	0.00096	ARF6	+	FALSE	(T)n	SINE,Alu
chr14	50792933	C	T	0.00156	ATP5S	+	FALSE	AluSx	SINE,Alu
chr1	35650022	C	A	0.00762	SFPQ	-	FALSE
chr2	97494866	C	T	0.00069	CNNM3	+	FALSE
chr1	94335332	G	T	0.00973	DNTTIP2	-	FALSE
chr5	175811091	G	A	0.00592	NOP16	-	FALSE
chr1	220231338	T	C	0.00762	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	120455441	A	G	0.00872	NOTCH2	-	FALSE
chr1	222906392	C	T	0.00804	BROX	+	FALSE	AluSx	SINE,Alu
chr4	57801150	A	T	0.00462	REST	+	FALSE
chr1	11979814	G	A	0.00697	KIAA2013	-	FALSE
chr1	117117182	C	T	0.00270	IGSF3	-	FALSE
chr1	16918734	G	C	0.00600	NBPF1	-	FALSE
chr1	44463185	T	G	0.00469	SLC6A9	-	FALSE
chr2	206981487	T	C	0.00281		.	FALSE	AluSg	SINE,Alu
chr1	117645998	A	G	0.00057		.	FALSE
chr2	220422583	G	A	0.00089	OBSL1	-	FALSE
chr8	30536606	T	C	0.00017	GSR	-	TRUE	AluSp	SINE,Alu
chr1	145689717	A	G	0.00696	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	46075715	A	G	0.00401	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	10520178	T	C	2.78615E-06		.	FALSE	AluSx	SINE,Alu
chr1	100654773	T	C	0.00810	DBT	-	TRUE	AluSz	SINE,Alu
chr2	200792052	G	A	0.00378	C2orf69	+	FALSE
chr1	9644562	A	G	0.00337		.	FALSE	AluSx	SINE,Alu
chr2	99812817	A	G	0.00201	MRPL30	+	TRUE	AluJb	SINE,Alu
chr2	38975954	A	C	0.00381	SRSF7	-	FALSE
chr1	16933631	G	A	0.00927	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	145509570	A	G	0.00037	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr18	24127008	T	G	0.00800	KCTD1	-	FALSE	(TGG)n	SINE,Alu
chr5	32124827	G	T	0.00047	GOLPH3	-	FALSE
chr1	17733531	G	A	0.00223	RCC2	-	FALSE
chr1	47746678	G	C	0.00328	STIL	-	FALSE
chr2	206986233	T	C	0.00109		.	FALSE	AluSz	SINE,Alu
chr1	11783041	A	G	0.00036		.	FALSE	AluSx	SINE,Alu
chr1	193054575	C	G	0.00029	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr1	150937963	A	G	0.00658	CERS2	-	FALSE	G-rich	SINE,Alu
chr1	226333556	C	A	0.00250	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr1	93617404	T	G	0.00265	TMED5	-	FALSE
chr10	13320110	T	C	0.00193	PHYH	-	FALSE
chr1	8045343	C	A	0.00162		.	FALSE
chr5	140720886	A	G	0.00980	PCDHGA1,PCDHGA2	+	FALSE
chr3	195963399	G	A	0.00341		.	FALSE
chr1	28150601	A	T	0.00382	STX12	+	FALSE
chr8	17796338	G	T	4.50000E-10	PCM1	+	FALSE
chr2	32539582	A	G	0.00419		.	FALSE	AluSp	SINE,Alu
chr5	149823795	A	T	0.00722	RPS14	-	FALSE
chr1	210025751	G	A	0.00067	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr1	27879797	C	A	0.00246	AHDC1	-	FALSE	MIRb	SINE,Alu
chr3	33185036	G	A	0.00573	CRTAP	+	FALSE	L2a	SINE,Alu
chr1	27182751	C	A	0.00122		.	FALSE
chr17	909317	G	A	0.00766	ABR	-	FALSE
chr3	5258236	G	C	3.37681E-06	EDEM1	+	FALSE
chr2	37327666	T	C	0.00231		.	FALSE
chr1	16889004	C	T	0.00977	NBPF1	-	FALSE
chr1	6283264	T	C	0.00521	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	10580506	A	T	0.00294	ODC1	-	FALSE
chr1	145511958	A	G	0.00038	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	67874859	T	C	0.00027	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	67874849	T	C	0.00169	SERBP1	-	TRUE	AluSx	SINE,Alu
chr12	125511942	A	G	0.00596	THRIL	-	FALSE	AluSx1	SINE,Alu
chr3	9519219	C	T	0.00146	SETD5	+	FALSE
chr17	7760704	A	G	0.00297	NAA38	-	FALSE
chr17	41144251	T	G	0.00014	RUNDC1	+	FALSE
chr18	60998527	C	G	0.00078	KDSR	-	FALSE	(AGAGAGAC)n	SINE,Alu
chr6	150045852	T	C	0.00204	NUP43	-	TRUE	AluSq	SINE,Alu
chrX	77083116	T	C	0.00658	MAGT1	-	TRUE	AluSg	SINE,Alu
chr2	99812876	A	G	0.00394	MRPL30	+	TRUE	AluJb	SINE,Alu
chr15	90819423	A	G	3.09408E-05		.	FALSE	AluSx	SINE,Alu
chr20	45839074	A	T	0.00019	ZMYND8	-	FALSE	(T)n	SINE,Alu
chr1	16912099	G	C	0.00450	NBPF1	-	FALSE
chr17	57279258	A	G	0.00114	PRR11	+	TRUE	AluSq2	SINE,Alu
chr2	206980072	G	A	1.35396E-05		.	FALSE	MLT1A1	SINE,Alu
chr9	19373161	A	G	0.00647	DENND4C	+	TRUE	MADE1	SINE,Alu
chr2	11966317	T	C	0.00011	LPIN1	+	FALSE
chr1	6694226	C	T	0.00742	THAP3	+	FALSE
chr1	19543249	T	C	1.15194E-07	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	92862888	A	G	0.00029		.	FALSE	AluJr	SINE,Alu
chr1	165370475	G	C	0.00256	RXRG	-	FALSE
chr7	20177525	T	C	0.00052	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr1	24022910	G	A	0.00702	RPL11	+	FALSE
chr15	31231255	A	G	0.00027	FAN1,MTMR10	+,-	FALSE
chrX	77083846	T	C	0.00668	MAGT1	-	TRUE	AluSz	SINE,Alu
chr6	31324078	G	T	0.00480		.	FALSE
chr1	27216740	G	A	0.00801	GPN2	-	FALSE
chr1	67874689	T	C	7.42611E-10	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr15	41590943	A	G	0.00561	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	10520099	T	C	5.82547E-06		.	FALSE	AluSx	SINE,Alu
chr1	19428086	G	T	0.00449	UBR4	-	FALSE
chr1	10042987	A	G	0.00261	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	38280010	C	T	0.00990	MTF1	-	FALSE
chrX	123046598	A	G	0.00371	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	155403831	A	G	0.00676	ASH1L,POU5F1P4	+,-	FALSE
chr5	150647744	A	G	0.00036	GM2A	+	TRUE	AluSc	SINE,Alu
chr15	39880822	A	G	0.00281	THBS1	+	FALSE
chr1	1650787	T	C	0.00071	CDK11B,CDK11A	-	FALSE
chr2	3502625	T	C	0.00800	ADI1	-	FALSE
chr3	196556843	G	A	4.00732E-06	PAK2	+	FALSE
chr1	33066859	A	G	0.00403	ZBTB8A	+	TRUE	AluSq4	SINE,Alu
chr5	73932315	T	C	0.00420	ENC1	-	FALSE
chr1	12628188	T	C	6.05765E-06	DHRS3	-	FALSE
chr1	10517508	T	C	0.00034		.	FALSE	AluSx1	SINE,Alu
chr3	40577810	A	G	0.00896	ZNF621	+	TRUE	AluSz	SINE,Alu
chr3	10192633	A	G	8.20807E-06	VHL	+	TRUE	AluSx1	SINE,Alu
chr3	179115635	T	C	0.00453	GNB4	-	TRUE	AluSg7	SINE,Alu
chr10	75008845	T	C	4.48613E-05	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	183187603	C	T	0.00357	LAMC2	+	FALSE
chr1	55316322	A	G	0.00266	DHCR24	-	FALSE
chr1	54571491	A	G	0.00538	TCEANC2	+	TRUE	AluSc	SINE,Alu
chrX	123046779	A	G	0.00629	XIAP	+	TRUE	AluSz	SINE,Alu
chr7	29962282	G	C	0.00023	SCRN1	-	FALSE
chr4	2940085	T	C	0.00801	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	118503786	A	G	0.00135	SPAG17	-	FALSE	AluSx3	SINE,Alu
chr17	73940077	T	C	0.00146	ACOX1	-	TRUE	AluJb	SINE,Alu
chr1	567783	T	C	0.00427	MIR6723	-	FALSE
chr1	38326704	T	C	0.00328	INPP5B	-	TRUE	AluJr	SINE,Alu
chr7	75958147	T	A	0.00917	YWHAG	-	FALSE
chr4	17802956	T	C	0.00249	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	24999101	G	T	0.00100	SRRM1	+	FALSE
chr2	85547772	G	C	0.00871	TGOLN2	-	FALSE
chr1	46521559	A	T	0.00177	PIK3R3	-	FALSE
chr1	38158705	G	A	0.00168	CDCA8	+	FALSE
chr10	75009592	T	C	1.74317E-07	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr3	20025679	A	G	0.00292	RAB5A,PP2D1	+,-	FALSE
chr3	179306775	C	T	7.88487E-06	MRPL47	-	FALSE
chr1	47844500	T	G	0.00169	CMPK1	+	FALSE
chr3	28390351	A	G	1.14010E-06	AZI2	-	FALSE
chr19	42376702	A	G	6.18708E-08		.	FALSE	AluSp	SINE,Alu
chr7	102016322	A	G	0.00223	LOC100289561,LOC100630923	+	FALSE
chr5	172396725	T	A	0.00014	RPL26L1	+	FALSE
chr1	53680090	G	A	0.00321	C1orf123	-	FALSE
chr10	89623858	G	C	0.00086	PTEN	+	FALSE	(CGG)n	SINE,Alu
chr3	57549504	A	G	0.00384	PDE12	+	TRUE	AluJb	SINE,Alu
chr1	206566195	C	T	7.54522E-05	SRGAP2	+	FALSE
chr1	52816674	T	C	1.79626E-07	CC2D1B	-	TRUE	AluSx1	SINE,Alu
chr3	113528892	A	T	8.78648E-05	ATP6V1A	+	FALSE	AluSp	SINE,Alu
chr3	37031951	G	A	0.00914	EPM2AIP1	-	FALSE	(A)n	SINE,Alu
chr1	16933629	A	G	0.00310	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	16952377	C	T	0.00056	CROCCP2	-	FALSE
chr1	230416038	G	A	0.00626	GALNT2	+	FALSE
chr2	85776590	T	C	0.00950	GGCX	-	TRUE	AluSz6	SINE,Alu
chr19	19792444	A	G	0.00686	ZNF101	+	TRUE	AluJb	SINE,Alu
chr1	46828700	A	G	0.00273	NSUN4	+	FALSE
chr12	25357680	T	C	0.00861	ETFRF1	+	FALSE
chr7	6695426	G	T	0.00893	ZNF316	+	FALSE
chr8	71550832	T	C	0.00234	LACTB2-AS1,LACTB2	+,-	FALSE
chr2	20097874	T	C	0.00769	TTC32	-	FALSE
chr1	168218671	A	G	0.00974		.	FALSE	AluSz	SINE,Alu
chr1	33071096	A	G	0.00238	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr2	99812988	A	G	0.00474	MRPL30	+	TRUE	AluJb	SINE,Alu
chr7	920724	A	G	0.00328	GET4	+	TRUE	AluSx1	SINE,Alu
chr1	158067060	T	A	0.00778	KIRREL	+	FALSE
chr1	109793319	C	T	0.00027	CELSR2	+	FALSE
chr1	32373437	G	A	3.32434E-12	PTP4A2	-	FALSE
chr8	140475147	C	T	0.00719		.	FALSE
chr1	85785556	A	C	0.00034	DDAH1	-	FALSE
chr19	23542304	T	C	2.38814E-05	ZNF91	-	TRUE	AluY	SINE,Alu
chr1	22352040	G	T	0.00255	LOC101928043,LINC00339	+,-	FALSE
chr1	27733305	A	C	0.00374	WASF2	-	FALSE
chr16	75479377	T	C	0.00639	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	92862804	A	G	0.00043		.	FALSE	AluJr	SINE,Alu
chr3	10142949	C	T	0.00612	FANCD2,FANCD2OS	+,-	FALSE
chr1	51822219	G	A	0.00283	EPS15	-	FALSE
chr1	145509570	A	G	0.00028	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr8	144940794	G	C	0.00038	EPPK1	-	FALSE
chr5	37289087	T	C	4.02459E-05		.	FALSE	AluSp	SINE,Alu

RBP	SLTM
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR234YMW
Platform	HiSeq
Pubmed ID	32252787

SLTM - Target Gene Network