RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	120539711	G	T	0.00627	NOTCH2	-	FALSE
chr3	45722491	A	G	0.00734	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr4	101946459	C	T	0.00245	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr1	93307477	A	G	6.92611E-06	FAM69A,RPL5	+,-	FALSE
chr1	10517306	T	C	0.00102		.	FALSE	AluJr	SINE,Alu
chr1	25894472	C	G	0.00594	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr3	122283287	T	C	8.96368E-06	DTX3L,PARP9	+,-	FALSE
chr4	39551975	T	C	5.31269E-07	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr8	48890114	A	G	2.61683E-11	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	26755229	A	G	0.00318	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr1	10520117	T	C	0.00078		.	FALSE	AluSx	SINE,Alu
chr1	11722688	G	A	0.00076	FBXO44	+	FALSE
chr1	1337734	C	T	3.46713E-05	MRPL20	-	FALSE
chr1	53289940	A	G	0.00694	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr15	41591021	A	G	0.00427	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr17	65335445	T	C	0.00084	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	182569318	G	T	0.00101	RGS16	-	FALSE
chr3	88104159	A	C	0.00279	CGGBP1	-	FALSE
chr2	206982296	T	C	0.00720		.	FALSE	AluSg7	SINE,Alu
chr7	137612915	G	A	0.00057	CREB3L2	-	FALSE
chr9	128729385	C	A	0.00170	PBX3	+	FALSE
chr1	52816622	T	C	6.23198E-05	CC2D1B	-	TRUE	AluSx1	SINE,Alu
chr6	34254585	G	T	0.00519		.	FALSE	AluSq2	SINE,Alu
chr1	154440548	G	T	0.00123	IL6R	+	FALSE	(TTGTT)n	SINE,Alu
chr1	3731965	G	A	0.00209	CEP104	-	FALSE
chr4	189020293	G	A	0.00361	TRIML2	-	FALSE
chr1	112266787	G	T	0.00642	FAM212B	-	FALSE
chr1	28835847	A	G	0.00553	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr2	128620435	C	A	0.00602	AMMECR1L	-	FALSE
chr1	95362514	G	T	0.00658	CNN3	-	FALSE
chr7	144060286	A	G	0.00674	ARHGEF5	+	FALSE
chr1	46159809	T	A	0.00761	TMEM69	+	FALSE
chr10	114209912	A	G	0.00060	VTI1A	+	TRUE	AluSx3	SINE,Alu
chr10	124815149	C	G	0.00993	ACADSB	+	FALSE	THE1A-int	SINE,Alu
chr1	40537943	A	C	0.00115	CAP1	+	FALSE	(A)n	SINE,Alu
chr8	30536015	T	C	0.00286	GSR	-	TRUE	AluJr	SINE,Alu
chr2	55516938	A	T	0.00265	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	6582558	T	C	0.00030	NOL9	-	TRUE	AluSx1	SINE,Alu
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr4	57326960	A	G	2.00220E-09	PAICS	+	TRUE	AluSx1	SINE,Alu
chr12	27574433	A	G	0.00473	ARNTL2,ARNTL2-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	46032311	A	G	0.00043	AKR1A1	+	FALSE
chr5	52389817	T	A	0.00868	ITGA2	+	FALSE
chr1	24296849	T	C	0.00125		.	FALSE
chr1	145284138	G	A	0.00382	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr2	224844864	A	G	7.12020E-05	SERPINE2	-	FALSE	L2b	SINE,Alu
chr1	220323448	C	T	0.00985	RAB3GAP2	-	FALSE
chr12	93192784	C	T	0.00423	EEA1	-	FALSE
chr16	46614656	T	A	0.00565	SHCBP1	-	FALSE
chr2	72968438	G	T	0.00147	EXOC6B	-	FALSE
chr1	24785393	C	T	0.00837	NIPAL3	+	FALSE
chr1	1656557	T	C	0.00061	SLC35E2	-	TRUE	AluSz	SINE,Alu
chr1	28825465	A	G	0.00756	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	11901592	T	C	0.00076	CLCN6,NPPA-AS1	+	FALSE
chr1	16890071	G	A	0.00246	NBPF1	-	FALSE
chr10	99504630	G	T	0.00544	ZFYVE27	+	FALSE
chr1	183187603	C	T	0.00357	LAMC2	+	FALSE
chr1	214524566	T	C	0.00040	PTPN14	-	TRUE	AluSg	SINE,Alu
chr6	47594192	C	T	0.00591	CD2AP	+	FALSE
chr1	149576483	G	A	0.00323	LINC00623,LINC00869,LOC103091866	+	FALSE
chr1	40219280	T	C	8.82951E-05	PPIE	+	FALSE
chr2	176791181	T	C	0.00063	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	9644562	A	G	0.00337		.	FALSE	AluSx	SINE,Alu
chrX	102613351	A	G	0.00969	TCEAL9	+	FALSE	L1ME4a	SINE,Alu
chr17	65335459	T	C	5.16289E-08	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	145512014	A	G	0.00144	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	14986104	T	C	0.00992	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	42644770	C	T	1.21495E-06	FOXJ3	-	FALSE
chr1	93297607	C	T	0.00016	RPL5	+	FALSE
chr1	158065762	C	T	0.00310	KIRREL	+	FALSE
chr1	25687621	A	T	0.00256	TMEM50A	+	FALSE
chr9	137534059	C	A	0.00626	COL5A1	+	FALSE
chr2	160084473	A	C	0.00101	TANC1	+	FALSE
chr2	72968440	T	A	0.00138	EXOC6B	-	FALSE
chr7	56131098	T	A	0.00950	CCT6A	+	FALSE	L1M5	SINE,Alu
chr1	1431165	C	T	0.00392	ATAD3B	+	FALSE
chr1	16933628	A	G	0.00430	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr17	79476999	G	T	6.09622E-06	ACTG1	-	FALSE
chr19	48753070	T	C	0.00214	CARD8	-	TRUE
chr8	143413136	C	T	0.00267	TSNARE1	-	FALSE
chr1	16529004	A	C	3.00007E-07	ARHGEF19	-	FALSE
chr1	87213188	C	A	0.00236	SH3GLB1	+	FALSE
chr1	36067925	T	C	0.00397	PSMB2	-	TRUE	AluSz	SINE,Alu
chr12	133298025	A	G	6.18330E-06	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	11298093	C	T	1.54321E-14	MTOR	-	FALSE
chr2	61369944	T	C	0.00024	LOC339803	-	TRUE	AluSx	SINE,Alu
chr1	95712458	C	A	0.00135	RWDD3	+	FALSE
chr1	114940209	G	T	0.00177	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	120164252	G	A	0.00139	ZNF697	-	FALSE
chr1	16842064	A	C	0.00081		.	FALSE	MER41E	SINE,Alu
chr5	290174	C	T	0.00083	PDCD6	+	FALSE
chr1	117618067	C	T	0.00118	TTF2	+	FALSE
chr1	16893822	C	T	0.00808	NBPF1	-	FALSE
chr9	133778117	C	T	0.00739	FIBCD1	-	FALSE
chr1	158067061	G	T	0.00093	KIRREL	+	FALSE
chr1	8921471	C	T	6.67995E-05	ENO1	-	FALSE
chr1	19595137	C	T	0.00085	AKR7L	-	FALSE
chr10	79800443	A	G	0.00971	RPS24	+	FALSE
chr1	52817432	T	C	0.00518	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	27107651	A	T	0.00200	ARID1A	+	FALSE	(A)n	SINE,Alu
chr10	101992810	T	C	0.00149	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr8	98736864	T	A	0.00086	MTDH	+	FALSE
chr1	1595077	T	C	0.00031	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	9331101	A	G	5.45177E-05	H6PD	+	FALSE	AluSx	SINE,Alu
chr1	36067760	T	C	0.00032	PSMB2	-	TRUE	AluSz	SINE,Alu
chr15	60678712	G	A	0.00801	ANXA2	-	FALSE
chr1	76252687	T	C	0.00021	RABGGTB	+	FALSE
chr1	36067752	T	C	1.27861E-08	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	126156660	C	G	0.00182	ZXDC	-	FALSE
chr17	5336210	T	C	0.00868	RPAIN,C1QBP	+,-	FALSE
chr1	53290057	A	G	0.00142	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr1	17199303	G	A	0.00062	LOC440570	+	FALSE
chr1	26898378	C	A	0.00148	RPS6KA1	+	FALSE
chr1	19542679	T	C	0.00738	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr3	12625747	G	A	0.00067	RAF1	-	FALSE
chr3	137787192	T	C	0.00764	DZIP1L	-	FALSE
chr16	10623525	T	C	8.96209E-06	EMP2	-	TRUE	AluSp	SINE,Alu
chr2	162268108	G	A	0.00091	PSMD14	+	FALSE
chr1	94703005	C	G	0.00180	ARHGAP29	-	FALSE
chr1	59142713	T	C	0.00078	MYSM1	-	FALSE
chr7	102277600	T	C	0.00240	POLR2J2,UPK3BL	-	TRUE	AluSc	SINE,Alu
chr2	46524711	C	T	0.00513	EPAS1	+	FALSE
chr2	202038524	A	G	0.00382		.	FALSE	AluSx1	SINE,Alu
chr1	10518052	T	C	0.00179		.	FALSE	AluJr	SINE,Alu
chr1	119683390	G	A	0.00283	LOC101929147	+	FALSE
chr10	15120275	T	C	0.00017	ACBD7	-	TRUE	L1PA7	SINE,Alu
chr16	19513719	T	A	0.00730	GDE1	-	FALSE	AluJr	SINE,Alu
chr2	272203	C	T	0.00064	ACP1	+	FALSE
chr3	51738256	A	G	0.00312	TEX264	+	FALSE
chr1	75196073	C	T	0.00159	CRYZ	-	FALSE
chr1	95362952	T	C	0.00155	CNN3	-	FALSE
chr5	151041877	C	A	1.29615E-05	SPARC	-	FALSE
chr1	3806074	G	A	0.00354	C1orf174	-	FALSE	AluSp	SINE,Alu
chr1	24798499	T	C	0.00028	NIPAL3	+	FALSE	(T)n	SINE,Alu
chr16	48386425	A	G	0.00152	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr15	40712737	T	C	0.00525	IVD	+	FALSE
chr1	10240685	C	T	0.00422	UBE4B	+	FALSE
chr17	79004271	T	C	0.00200	BAIAP2-AS1	-	FALSE	AluSq2	SINE,Alu
chr1	169768080	C	A	0.00980	C1orf112	+	FALSE
chr4	99801986	C	A	0.00687	EIF4E	-	FALSE
chr1	67518534	C	T	0.00682	SLC35D1	-	FALSE
chr1	10518756	T	C	0.00937		.	FALSE	AluSx1	SINE,Alu
chr19	56090351	C	T	1.52943E-09	ZNF579	-	FALSE
chr1	109855150	A	C	0.00062	SORT1	-	FALSE	A-rich	SINE,Alu
chr5	174955746	G	C	0.00768	SFXN1	+	FALSE
chr9	85861561	C	T	0.00287	FRMD3	-	FALSE	(TC)n	SINE,Alu
chr1	205112911	T	C	0.00161	DSTYK	-	FALSE
chr1	52378211	T	C	0.00195	RAB3B	-	TRUE	FLAM_C	SINE,Alu
chr19	13883927	A	G	0.00143	MRI1	+	TRUE	AluSz	SINE,Alu
chr16	10623631	T	C	1.36144E-05	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	26158906	C	A	0.00362	MTFR1L,AUNIP	+,-	FALSE
chr2	37331119	T	C	0.00122		.	FALSE	AluSx1	SINE,Alu
chr1	38423182	G	C	0.00664	SF3A3	-	FALSE	AluJo	SINE,Alu
chr7	6501828	C	A	0.00110	KDELR2	-	FALSE
chr1	19543353	T	C	0.00091	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr16	10623543	T	C	0.00025	EMP2	-	TRUE	AluSp	SINE,Alu
chr3	45721990	A	G	0.00779	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	46165437	T	C	0.00090	IPP	-	TRUE	FRAM	SINE,Alu
chr5	175934037	C	A	0.00182	FAF2	+	FALSE	A-rich	SINE,Alu
chr3	44839350	A	C	0.00837	KIF15	+	FALSE
chr1	100203693	G	A	0.00142	FRRS1	-	FALSE
chr7	129472356	C	T	0.00279	UBE2H	-	FALSE
chr1	57002773	A	G	0.00162	PLPP3	-	FALSE
chr5	7885959	A	G	0.00628	MTRR	+	FALSE
chr1	33149496	A	G	0.00308	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr12	98943187	A	G	2.29648E-09	TMPO	+	TRUE	AluSz	SINE,Alu
chr3	53265766	C	T	0.00088	TKT	-	FALSE
chr5	204215	A	G	0.00872		.	FALSE	MER68	SINE,Alu
chr1	27205044	T	C	0.00312		.	FALSE	AluSx	SINE,Alu
chr1	9161137	T	C	0.00087		.	FALSE	AluSx	SINE,Alu
chr1	16841972	G	A	1.76809E-05		.	FALSE	MER41E	SINE,Alu
chr11	73387540	G	A	0.00438	RAB6A	-	FALSE
chr12	60173406	C	T	0.00708	SLC16A7	+	FALSE
chr1	10519947	T	C	0.00328		.	FALSE	AluJr	SINE,Alu
chr4	129796173	G	T	1.40481E-05	JADE1	+	FALSE
chr3	42591956	G	A	0.00503	SEC22C	-	FALSE
chr12	125511311	A	G	0.00299	THRIL	-	FALSE	AluSx1	SINE,Alu
chr2	37331119	T	C	0.00758		.	FALSE	AluSx1	SINE,Alu
chr17	4928416	A	G	0.00941	KIF1C	+	TRUE	AluSz	SINE,Alu
chr1	10520725	T	C	0.00234	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	32687472	G	A	0.00877	TMEM234,EIF3I	+,-	FALSE
chr1	205687351	T	C	2.02150E-05	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr6	17951005	G	C	0.00381	KIF13A	-	FALSE
chr1	1650801	T	C	0.00761	CDK11B,CDK11A	-	FALSE
chr1	204096630	T	C	0.00471	SOX13	+	FALSE
chr1	10517623	T	C	0.00145		.	FALSE	AluSx1	SINE,Alu
chr9	131457039	C	T	0.00148	SET	+	FALSE
chr16	10625050	T	C	1.54421E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	46828700	A	G	0.00012	NSUN4	+	FALSE
chr1	190234133	A	C	5.13910E-06	BRINP3	-	FALSE
chr1	15394286	C	G	0.00260	KAZN	+	FALSE
chr17	5288081	C	T	0.00518	RABEP1	+	FALSE
chr9	131872857	C	G	0.00151	CRAT	-	FALSE
chr1	1498747	T	C	0.00847	SSU72	-	TRUE	AluSg7	SINE,Alu
chr10	104417856	T	A	0.00616	TRIM8	+	FALSE	(AAT)n	SINE,Alu
chr3	49571462	G	T	0.00032	DAG1	+	FALSE
chr1	210004332	G	A	0.00813	DIEXF	+	FALSE
chr1	19586519	A	G	0.00015	MRTO4	+	TRUE	AluSz	SINE,Alu
chr9	132268259	A	G	0.00032	LINC00963	+	TRUE	AluJb	SINE,Alu
chr4	17804785	T	C	0.00273	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	28566461	T	C	1.61071E-05		.	FALSE	AluSx1	SINE,Alu
chr7	6064011	T	A	0.00246	EIF2AK1	-	FALSE
chr1	19542239	T	C	0.00043	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr5	151041874	A	C	0.00060	SPARC	-	FALSE
chr1	22419433	T	G	0.00156	CDC42	+	FALSE
chr4	113152490	G	A	0.00221		.	FALSE
chr4	17629937	G	A	0.00795		.	FALSE	MER90	SINE,Alu
chr1	29644328	C	T	0.00076	PTPRU	+	FALSE
chr19	16661421	T	C	0.00427	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr1	110604747	G	A	0.00101	ALX3	-	FALSE
chr4	57801150	A	T	0.00462	REST	+	FALSE
chr20	35520223	T	C	0.00111	TLDC2	+	FALSE	AluSx3	SINE,Alu
chr1	35647099	A	G	0.00092	SFPQ	-	FALSE
chr1	145284175	G	C	0.00562	NBPF20,NOTCH2NL	+	FALSE
chr1	1593828	G	C	0.00348	CDK11B,SLC35E2B	-	FALSE
chr12	9848629	A	G	0.00027	CLEC2D	+	FALSE
chr14	23300642	C	A	0.00266	MRPL52	+	FALSE	MIRb	SINE,Alu
chr3	10192709	C	T	0.00082	VHL	+	FALSE	AluSx1	SINE,Alu
chr1	9416151	G	A	0.00292	SPSB1	+	FALSE
chr1	54571380	A	G	0.00332	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr2	206988452	A	T	0.00669	NDUFS1	-	FALSE
chr19	17535871	A	C	0.00948	MVB12A	+	FALSE
chr3	52289298	G	T	0.00059	WDR82	-	FALSE
chr1	205581853	C	T	0.00750	ELK4	-	FALSE
chr3	40578997	A	G	0.00094	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	24022914	A	G	0.00347	RPL11	+	FALSE
chr2	61764895	C	A	0.00862	XPO1	-	FALSE	(AC)n	SINE,Alu
chr4	2940485	T	C	0.00676	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr2	202038657	A	G	0.00354		.	FALSE	AluSx1	SINE,Alu
chr2	219523584	C	T	0.00299	ZNF142	-	FALSE
chr2	97884961	G	A	0.00668	ANKRD36	+	FALSE
chr1	6282587	T	C	7.24363E-07	ICMT	-	TRUE
chr5	154194459	C	A	0.00832	LARP1	+	FALSE
chr1	9644847	A	G	0.00672		.	FALSE	AluJr	SINE,Alu
chr1	33148225	A	G	0.00031	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	1662547	T	C	0.00556	SLC35E2	-	TRUE	AluY	SINE,Alu
chr1	19234134	A	G	0.00027	IFFO2	-	FALSE
chr2	37331555	T	C	0.00171		.	FALSE	AluJb	SINE,Alu
chr5	118811533	G	A	0.00781	HSD17B4	+	FALSE
chr5	133738270	T	C	5.55380E-10	CDKN2AIPNL	-	TRUE	FRAM	SINE,Alu
chr16	10624996	T	C	0.00059	EMP2	-	TRUE	AluSx3	SINE,Alu
chr7	6501832	A	C	0.00175	KDELR2	-	FALSE
chr5	64964314	T	C	0.00208	SGTB	-	TRUE	AluSc	SINE,Alu
chr14	19685015	C	G	0.00069	DUXAP10	+	FALSE
chr1	26152604	T	C	0.00954	MTFR1L	+	FALSE	AluSz6	SINE,Alu
chr1	120458004	A	T	0.00247	NOTCH2	-	FALSE
chr2	110373938	T	G	0.00413	SOWAHC	+	FALSE	(GAAT)n	SINE,Alu
chr3	10290512	A	G	0.00289	TATDN2	+	FALSE
chr5	133738270	T	C	0.00067	CDKN2AIPNL	-	TRUE	FRAM	SINE,Alu
chr1	33149508	A	G	0.00107	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	28564252	A	G	0.00118	ATPIF1	+	FALSE
chr17	80899281	G	A	0.00053	TBCD	+	FALSE
chr1	145281656	A	T	0.00202	NBPF20,NOTCH2NL	+	FALSE
chr1	6259433	G	A	0.00522	RPL22	-	FALSE	G-rich	SINE,Alu
chr4	169847647	A	T	0.00328	PALLD	+	FALSE
chr1	16889642	T	C	6.70250E-05	NBPF1	-	TRUE
chr1	46077268	A	G	0.00484	NASP	+	TRUE	AluSc8	SINE,Alu
chr6	44417182	A	G	0.00018	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chrX	77083915	T	C	0.00075	MAGT1	-	TRUE	AluSz	SINE,Alu
chr4	39551008	T	C	0.00106	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	26226610	C	T	0.00955	STMN1	-	FALSE
chr2	86850798	A	G	0.00267	RNF103-CHMP3,RNF103	-	FALSE
chr19	57816261	A	G	0.00156		.	FALSE	AluY	SINE,Alu
chr1	46828653	T	A	0.00920	NSUN4	+	FALSE
chr3	193854148	T	A	0.00106	HES1	+	FALSE
chr1	148556784	G	A	0.00543		.	FALSE
chr2	37327685	T	C	6.61966E-05		.	FALSE
chr1	990280	C	T	0.00243	AGRN	+	FALSE
chr8	128944712	A	C	0.00033	PVT1	+	FALSE
chr16	10624926	T	C	0.00029	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	146215138	A	G	0.00038	NBPF20,NBPF10,NBPF25P	+	FALSE
chr1	6282324	T	C	0.00186	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	1650832	A	G	0.00065	CDK11B,CDK11A	-	FALSE
chr1	51822219	G	A	0.00223	EPS15	-	FALSE
chr1	3545194	C	G	0.00176	TPRG1L	+	FALSE
chr1	17320251	G	A	0.00367	ATP13A2	-	FALSE
chr3	120114953	G	A	0.00373	FSTL1	-	FALSE
chr2	128602507	T	C	4.02376E-05		.	FALSE	AluSq2	SINE,Alu
chr16	719933	T	C	0.00067	RHOT2	+	FALSE
chr3	52109841	T	C	7.35943E-05	POC1A	-	FALSE
chr11	68523338	T	C	0.00817	CPT1A	-	TRUE	AluSq	SINE,Alu
chr1	234740975	G	A	0.00106	IRF2BP2	-	FALSE
chr7	75958147	T	A	0.00917	YWHAG	-	FALSE
chr3	18427924	G	T	0.00312	SATB1	-	FALSE
chr7	6501831	T	A	0.00110	KDELR2	-	FALSE
chr3	48894565	T	A	0.00142	SLC25A20	-	FALSE
chr5	34906547	T	C	0.00051	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	47184539	C	T	0.00425	EFCAB14	-	FALSE
chr1	92862879	A	G	3.90108E-09		.	FALSE	AluJr	SINE,Alu
chr1	120163007	G	A	0.00573	ZNF697	-	FALSE
chr1	23636275	G	T	0.00258	HNRNPR	-	FALSE
chr5	149829071	T	C	0.00360	RPS14	-	FALSE
chr19	18477337	A	G	0.00085	PGPEP1	+	TRUE	AluSx1	SINE,Alu
chr1	145689537	A	G	0.00028	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	3395039	G	A	0.00027	ARHGEF16	+	FALSE
chr2	206987136	T	C	0.00189		.	FALSE	AluSx	SINE,Alu
chr1	144932220	G	T	0.00449	NBPF20,PDE4DIP	+,-	FALSE
chr15	42503334	C	T	0.00448	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr7	129472333	C	T	0.00292	UBE2H	-	FALSE	(CA)n	SINE,Alu
chr1	44423703	C	T	1.21014E-14	IPO13	+	FALSE
chr9	115447580	T	C	2.95057E-05	INIP	-	TRUE	AluJb	SINE,Alu
chr1	145688664	A	T	0.00087	NBPF20,NBPF10,RNF115	+	FALSE
chr5	180663941	G	T	0.00166	RACK1	-	FALSE
chr1	10042988	A	G	0.00359	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr16	11931208	A	T	0.00316	RSL1D1	-	FALSE
chr1	144828845	A	T	0.00178	NBPF20,NBPF9	+	FALSE
chr10	100177984	C	T	6.55965E-05	HPS1	-	FALSE
chr1	220231254	T	C	0.00974	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr2	232319524	T	A	0.00040	NCL	-	FALSE
chr19	51172526	G	C	0.00276	SHANK1	-	FALSE
chr1	10519951	T	C	0.00672		.	FALSE	AluJr	SINE,Alu
chr2	55255314	A	C	0.00638	RTN4	-	FALSE
chr3	40578933	A	G	0.00947	ZNF621	+	TRUE	AluJr	SINE,Alu
chr14	23795222	T	G	0.00162	BCL2L2-PABPN1,PABPN1	+	FALSE
chr2	128950491	A	G	0.00043	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	54692334	T	C	5.22151E-05	SSBP3	-	FALSE	(T)n	SINE,Alu
chr5	159492103	T	G	0.00332	TTC1	+	FALSE
chr1	21102502	C	A	0.00021	HP1BP3	-	FALSE
chr1	40975260	G	C	0.00902	EXO5	+	FALSE
chr1	179044100	A	G	0.00219	FAM20B	+	TRUE	AluSx	SINE,Alu
chr4	185309401	A	G	0.00782	IRF2	-	FALSE
chr3	195415529	C	T	0.00819	LINC00969,SDHAP2	+	FALSE	L1ME2	SINE,Alu
chr8	38829839	A	G	0.00184	PLEKHA2	+	TRUE	AluJr4	SINE,Alu
chr5	125962568	A	G	0.00015	PHAX	+	TRUE	AluSz	SINE,Alu
chr8	145159712	A	G	0.00402	MAF1	+	FALSE
chr1	27107669	T	A	0.00636	ARID1A	+	FALSE	(A)n	SINE,Alu
chr1	16910172	G	A	0.00958	NBPF1	-	FALSE
chr1	16576295	G	A	0.00139	FBXO42	-	FALSE	A-rich	SINE,Alu
chr1	32385070	T	A	0.00593	PTP4A2	-	FALSE
chr2	112252629	A	C	0.00107	MIR4435-2HG	-	FALSE
chr4	165999189	T	C	0.00614	TMEM192	-	TRUE	FLAM_C	SINE,Alu
chr1	35251229	G	A	0.00516	GJB3	+	FALSE
chr17	42876730	T	C	0.00024	GJC1	-	TRUE	AluSz6	SINE,Alu
chr1	94351065	A	T	0.00142	GCLM	-	FALSE
chr6	29912348	A	G	0.00429		.	FALSE
chr4	57327082	A	G	0.00834	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	109818161	C	T	0.00382	CELSR2	+	FALSE
chr1	44438961	A	G	0.00013	DPH2	+	FALSE	MER3	SINE,Alu
chr1	179077613	T	C	0.00731	ABL2	-	FALSE
chr3	40577755	A	G	0.00044	ZNF621	+	TRUE	AluSz	SINE,Alu
chr1	15991645	T	C	0.00361		.	FALSE	AluSp	SINE,Alu
chr6	34249357	T	A	0.00373		.	FALSE
chr1	51822219	G	A	0.00018	EPS15	-	FALSE
chrM	5265	C	A	0.00026		.	FALSE
chr1	28835847	A	G	0.00042	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr11	94863483	C	T	0.00501	ENDOD1	+	FALSE
chr2	37331038	T	C	4.65669E-05		.	FALSE	AluSx1	SINE,Alu
chr1	36067760	T	C	0.00021	PSMB2	-	TRUE	AluSz	SINE,Alu
chr4	165998078	T	C	0.00407	TMEM192	-	TRUE	AluSx	SINE,Alu
chr1	145369550	A	G	0.00031	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr5	118729619	A	G	0.00586	TNFAIP8	+	FALSE
chr1	8045343	C	A	0.00162		.	FALSE
chr1	28859264	T	G	0.00030	RCC1	+	FALSE
chr1	179044110	A	G	0.00176	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	38275432	G	T	0.00536	MTF1	-	FALSE
chr1	229631734	T	C	0.00611	NUP133	-	FALSE
chr1	143398850	G	T	0.00639		.	FALSE
chr1	28835201	C	T	0.00371	SNHG3,RCC1,SNORA73B	+	FALSE	U17	SINE,Alu
chr10	11912065	C	G	0.00191	PROSER2-AS1,PROSER2	+,-	FALSE
chr1	226172221	T	C	0.00118	SDE2	-	FALSE	L1MEf	SINE,Alu
chr12	1611798	C	T	0.00338	LINC00942	+	FALSE
chr1	22854702	C	T	5.42952E-11	ZBTB40	+	FALSE
chr1	19543457	T	C	0.00718	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	15114492	T	C	0.00073	RBSN	-	TRUE	AluY	SINE,Alu
chr2	99812988	A	G	0.00700	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	231154935	C	T	0.00093	FAM89A	-	FALSE
chr2	206981874	T	C	0.00060		.	FALSE	AluJb	SINE,Alu
chr4	17629434	A	G	0.00661		.	FALSE	AluSx3	SINE,Alu
chr3	63997896	G	A	0.00301	PSMD6-AS2,PSMD6	+,-	FALSE
chr16	75479467	T	C	0.00160	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr4	152020780	C	T	0.00925	RPS3A	+	FALSE
chr5	135382989	G	C	7.70449E-09	TGFBI	+	FALSE
chr3	40503729	A	G	5.91625E-05	RPL14	+	FALSE
chr7	65618876	A	G	0.00817	CRCP	+	TRUE	AluSx3	SINE,Alu
chr16	23536684	T	C	0.00012	EARS2	-	FALSE
chr1	45976257	C	A	0.00015	MMACHC	+	FALSE
chr5	74324902	C	T	0.00574	GCNT4	-	FALSE
chr3	11596302	T	C	0.00110	ATG7	+	FALSE
chr1	20976078	T	C	0.00344	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr21	34730108	A	G	0.00680	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr2	25013062	T	C	0.00327		.	FALSE
chr1	20977856	T	C	0.00232	PINK1,PINK1-AS	+,-	FALSE
chr1	19542250	T	C	9.94571E-09	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr12	46577921	G	T	0.00306	SLC38A1	-	FALSE
chr1	145689568	A	G	0.00131	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr2	172413267	G	C	0.00938	CYBRD1	+	FALSE
chr1	148561089	T	C	0.00010	NBPF15	+	FALSE
chr1	156005447	C	A	0.00337	UBQLN4	-	FALSE
chr8	145159709	C	A	0.00314	MAF1	+	FALSE
chr6	42856937	A	G	0.00122	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr3	62189465	C	T	2.69664E-05	PTPRG	+	FALSE
chr2	37327669	T	C	0.00566		.	FALSE
chr7	156764350	G	C	0.00415	NOM1	+	FALSE
chr1	45975574	A	G	0.00613	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	65897981	G	A	0.00071	LEPR,LEPROT	+	FALSE
chr5	174956493	T	A	0.00466	SFXN1	+	FALSE
chr2	217366674	A	G	0.00219		.	FALSE	AluSz	SINE,Alu
chr10	95163809	G	T	0.00453	MYOF	-	FALSE
chr7	6064012	T	C	0.00240	EIF2AK1	-	FALSE
chr1	145512950	A	G	0.00996	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr8	25317824	A	T	0.00017	CDCA2	+	FALSE
chr4	39549797	T	C	0.00196	UGDH-AS1,SMIM14	+,-	FALSE	AluSp	SINE,Alu
chr2	238484068	T	C	0.00047	RAB17	-	FALSE
chr1	27992825	G	A	0.00192	IFI6	-	FALSE
chr1	31426815	A	G	0.00797	PUM1	-	FALSE
chr2	99812876	A	G	0.00394	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	180169330	C	T	0.00015	FLJ23867	+	FALSE	MIR	SINE,Alu
chr2	54888359	A	G	3.08576E-05	SPTBN1	+	FALSE
chr1	25775374	C	T	0.00710	TMEM57	+	FALSE
chr1	182568729	C	G	0.00012	RGS16	-	FALSE
chr1	9162348	T	C	0.00359		.	FALSE	AluSx	SINE,Alu
chr5	96372165	G	A	0.00149		.	FALSE
chr1	220231338	T	C	0.00762	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	67874697	T	C	0.00186	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	33149443	A	G	6.55200E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	206987738	T	C	0.00322		.	FALSE	AluJb	SINE,Alu
chr1	16901668	T	C	0.00177	NBPF1	-	FALSE
chr3	44791062	T	C	0.00014	KIAA1143	-	FALSE
chr1	207247477	T	C	2.68116E-05	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr1	15818081	T	C	9.65448E-05	CASP9	-	TRUE	AluJb	SINE,Alu
chr16	10624953	T	C	0.00056	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	142804438	G	T	0.00522		.	FALSE
chr4	95586725	T	A	0.00743	PDLIM5	+	FALSE
chr1	23885230	C	G	0.00075	ID3	-	FALSE
chr10	119766673	T	G	0.00082	RAB11FIP2	-	FALSE
chr5	140240514	A	G	0.00151	PCDHA1,PCDHA2,PCDHA3,PCDHA4,PCDHA5,PCDHA6,PCDHA7,PCDHA8,PCDHA9,PCDHA10	+	FALSE	AluY	SINE,Alu
chr12	56510698	C	G	0.00019	RPL41	+	FALSE
chr1	84373309	T	C	0.00627	TTLL7	-	FALSE
chr3	48787051	T	C	0.00105	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	172411768	T	C	0.00416	C1orf105,PIGC	+,-	FALSE
chr7	100031511	C	T	0.00490	MEPCE	+	FALSE
chr1	160990878	C	T	9.31086E-06	F11R	-	FALSE
chr4	2940164	T	C	0.00381	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr16	75479331	T	C	0.00725	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr19	57818376	A	G	0.00031		.	FALSE	AluJr	SINE,Alu
chr1	6282401	T	C	0.00806	ICMT	-	TRUE	AluSz	SINE,Alu
chr4	83406545	A	G	0.00156	TMEM150C	-	FALSE
chr1	179044206	A	G	0.00458	FAM20B	+	TRUE	AluSx	SINE,Alu
chr3	47953733	C	A	0.00057	MAP4	-	FALSE
chr1	67874689	T	C	3.52759E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	32661615	A	T	0.00225	TXLNA	+	FALSE
chr2	47703548	G	A	5.05442E-05	MSH2	+	FALSE
chr1	153920564	A	G	0.00747	CRTC2	-	FALSE
chr2	197001673	T	C	0.00043	STK17B	-	FALSE
chr12	98942904	A	G	0.00259	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	32953296	A	G	5.26589E-05	ZBTB8B	+	TRUE	AluSz	SINE,Alu
chr17	73940094	T	C	0.00557	ACOX1	-	TRUE	AluJb	SINE,Alu
chr16	10623706	T	C	0.00064	EMP2	-	TRUE	AluSp	SINE,Alu
chr2	37478348	T	A	0.00392	PRKD3	-	FALSE
chr1	33765752	G	A	0.00963	ZNF362	+	FALSE
chr11	34379275	T	C	0.00994	ABTB2	-	FALSE
chr1	25663918	G	A	0.00951	RSRP1	-	FALSE
chr4	187628395	T	A	0.00000	FAT1	-	FALSE
chr1	33148196	A	G	0.00756	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	10521254	T	C	0.00041	DFFA	-	TRUE	AluY	SINE,Alu
chr1	152552285	C	A	0.00400	LCE3D	-	FALSE
chr17	48771486	G	A	0.00081	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr19	42376843	A	G	0.00221		.	FALSE	AluSp	SINE,Alu
chr1	1595034	T	C	2.36116E-07	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	37945905	A	T	0.00038	ZC3H12A	+	FALSE
chr1	16910172	G	A	0.00085	NBPF1	-	FALSE
chr1	235492546	T	G	0.00786	GGPS1	+	FALSE
chr6	13788297	T	C	0.00979	MCUR1	-	TRUE	AluSx	SINE,Alu
chr2	32532809	A	G	0.00255		.	FALSE	AluSx1	SINE,Alu
chr17	43364293	C	G	0.00144	MAP3K14	-	FALSE
chr1	226923264	G	A	0.00046	ITPKB	-	FALSE
chr17	42880190	T	C	0.00284	GJC1	-	TRUE	AluJb	SINE,Alu
chr4	57326875	A	G	0.00456	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	47843356	A	T	0.00556	CMPK1	+	FALSE
chr6	42854664	A	G	5.02680E-07	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	46164493	T	C	0.00977	IPP	-	TRUE	AluJb	SINE,Alu
chr21	33974092	G	C	0.00865	C21orf59	-	FALSE
chr2	239970718	C	A	0.00244	HDAC4	-	FALSE	(AAAAC)n	SINE,Alu
chr1	45976220	A	G	0.00031	MMACHC	+	TRUE

RBP	DDX1
Knock-Method	shRNA
RBP Family	DEAD
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR070LJO
Platform	HiSeq
Pubmed ID	32252787

DDX1 - Target Gene Network