Dataset Overview
RBP
EIF4G2
Knock-Method
shRNA
RBP Family
MIF4G
Biosample Name
HepG2
Tissue Type
Liver
Biosample Type
Cell line
# of Control
2
# of Treat
2
Species
Human
Data Source
ENCODE
Profile ID
ENCSR152MON
Platform
HiSeq
Pubmed ID
32252787
EIF4G2 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of EIF4G2
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A1BG
15.89
20.22
0.67185
1.43074E-05
0.00012
A1CF
30.66
22.97
0.20689
0.03536
0.08685
A2M
2149.68
2961.59
0.66605
1.75108E-10
4.13217E-09
A4GALT
0.85
0.26
-1.19733
0.00367
0.01387
AAAS
25.65
21.29
-0.24675
0.03463
0.08548
AADAC
0.57
1.23
1.13097
0.00112
0.00511
AADAT
4.81
3.13
-0.53106
0.00124
0.00560
AAED1
6.5
3.75
-0.60030
8.26087E-05
0.00055
AAGAB
8.9
4.37
-0.98824
8.86372E-11
2.20960E-09
AAK1
2.42
1.74
-0.53433
0.00714
0.02402
Showing 1 to 10 of 5,786 entries
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Function Analysis of Target Genes of EIF4G2
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACAD11
132297798_132297900_132297676_132297725_132298335_132298402
0.00231
-0.143
DataSet_01_134
View details
ACLY
40052872_40052902_40049285_40049427_40054001_40054092
0.00542
-0.11
DataSet_01_134
View details
ADARB1
46604388_46604508_46603276_46603425_46604837_46605006
0.00408
-0.217
DataSet_01_134
View details
AFP
74320952_74321007_74319549_74319614_74321347_74321458
0.00000
-0.016
DataSet_01_134
View details
AFP
74310709_74310839_74309063_74309161_74315051_74315184
0.00019
-0.019
DataSet_01_134
View details
AHSG
186336079_186336177_186334975_186335139_186336324_186336426
0.00000
0.015
DataSet_01_134
View details
AHSG
186337645_186337729_186336324_186336426_186338374_186339089
0.00149
-0.011
DataSet_01_134
View details
ALB
74272345_74272478_74270017_74270123_74275071_74275204
0.00087
0.117
DataSet_01_134
View details
ALB
74270832_74271056_74270024_74270123_74272345_74272478
0.00210
-0.008
DataSet_01_134
View details
ANKRD10
111546455_111546549_111545044_111545610_111558379_111558471
0.00334
-0.088
DataSet_01_134
View details
Showing 1 to 10 of 287 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACADVL
7126451_7126556_7126962_7127049_7126078_7126184
0.00380
0.089
DataSet_01_134
View details
ACSS2
33513907_33514084_33514679_33514754_33513500_33513569
0.00764
0.138
DataSet_01_134
View details
ADAM9
38928816_38928922_38933665_38933794_38913095_38913291
0.00015
-0.183
DataSet_01_134
View details
AFG3L2
12367274_12367381_12370847_12370925_12366963_12367116
0.00971
0.201
DataSet_01_134
View details
AFMID
76187050_76187141_76198575_76198684_76183397_76183514
0.00125
-0.093
DataSet_01_134
View details
AFP
74306318_74306530_74309067_74309161_74303842_74304023
0.00002
-0.008
DataSet_01_134
View details
AFP
74306337_74306530_74309067_74309161_74303842_74304023
0.00348
-0.124
DataSet_01_134
View details
AHSG
186334975_186335139_186336394_186336426_186334192_186334316
0.00000
0.025
DataSet_01_134
View details
AHSG
186336079_186336280_186336285_186336426_186334975_186335139
0.00000
0.026
DataSet_01_134
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AHSG
186336079_186336280_186336300_186336426_186334975_186335139
0.00000
0.021
DataSet_01_134
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Showing 1 to 10 of 191 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
AL136419.6
24682614_24683357_24683199_24683357_24680885_24681035
0.00598
-0.1
DataSet_01_134
View details
AL163636.6
21152745_21152917_21152745_21152855_21167513_21168735
0.00048
-0.028
DataSet_01_134
View details
ALB
74279136_74279307_74279136_74279299_74280751_74280884
0.00353
-0.006
DataSet_01_134
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ATAT1
30594662_30595051_30594662_30594769_30595236_30595297
0.00813
0.082
DataSet_01_134
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B4GALT2
44451188_44451420_44451188_44451293_44455969_44456151
0.00645
-0.035
DataSet_01_134
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C11orf48
62432594_62432663_62432602_62432663_62432320_62432445
0.00644
0.326
DataSet_01_134
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CHPT1
102120071_102120295_102120071_102120182_102122678_102122852
0.00323
-0.085
DataSet_01_134
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CHPT1
102120071_102120275_102120071_102120182_102122678_102122852
0.00912
-0.077
DataSet_01_134
View details
CPNE1
34220084_34220307_34220232_34220307_34219866_34219947
0.00002
-0.122
DataSet_01_134
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CTSA
44521363_44521526_44521363_44521519_44521858_44521950
0.00555
0.023
DataSet_01_134
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Showing 1 to 10 of 42 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACAD11
132297639_132297900_132297639_132297725_132298335_132298490
0.00147
-0.191
DataSet_01_134
View details
ACOT8
44472165_44472411_44472165_44472360_44472901_44473059
0.00270
-0.095
DataSet_01_134
View details
ACTG1
79478928_79479168_79478928_79479141_79479257_79479386
0.00852
-0.018
DataSet_01_134
View details
ACTG1
79478213_79478829_79478213_79478652_79478928_79479168
0.00934
0.008
DataSet_01_134
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APOA2
161192707_161192840_161192707_161192784_161193139_161193215
0.00000
-0.035
DataSet_01_134
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APOA2
161192707_161193056_161192707_161192784_161193139_161193215
0.00000
-0.058
DataSet_01_134
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APOA2
161192707_161192820_161192707_161192784_161193139_161193215
0.00004
-0.111
DataSet_01_134
View details
ARFGAP2
47195309_47195466_47195309_47195391_47196565_47196669
0.00565
-0.071
DataSet_01_134
View details
ASGR1
7081731_7081918_7081731_7081907_7082508_7082883
0.00235
0.015
DataSet_01_134
View details
ATP13A1
19756455_19756622_19756455_19756599_19756682_19756794
0.00399
0.116
DataSet_01_134
View details
Showing 1 to 10 of 60 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACAD11
132297639_132298402_132297639_132297725_132298335_132298402
0.00353
-0.171
DataSet_01_134
View details
ACADVL
7125985_7126556_7125985_7126184_7126451_7126556
0.00000
-0.149
DataSet_01_134
View details
ACADVL
7127131_7127388_7127131_7127194_7127286_7127388
0.00057
0.026
DataSet_01_134
View details
ACTB
5567911_5569031_5567911_5568350_5568791_5569031
0.00000
0.02
DataSet_01_134
View details
ACTB
5568791_5569294_5568791_5569031_5569165_5569294
0.00001
0.031
DataSet_01_134
View details
ACTG1
79477952_79478652_79477952_79478134_79478213_79478652
0.00030
0.011
DataSet_01_134
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AP1G2
24030720_24031624_24030720_24030844_24031170_24031624
0.00748
0.115
DataSet_01_134
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ARHGEF40
21556988_21557704_21556988_21557035_21557172_21557704
0.00534
-0.086
DataSet_01_134
View details
ATF4
39916568_39917676_39916568_39916756_39917358_39917676
0.00393
0.039
DataSet_01_134
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ATP5D
1244313_1244824_1244313_1244439_1244735_1244824
0.00909
-0.132
DataSet_01_134
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Differential Variants in RNA (DVRs)
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
chr1
19542456
T
C
0.00135
LOC101927895,EMC1
+,-
FALSE
AluSz
SINE,Alu
chr1
13942884
A
C
0.00016
PDPN
+
FALSE
chr1
44088117
G
T
0.00731
PTPRF
+
FALSE
(T)n
SINE,Alu
chr1
109818160
T
G
0.00745
CELSR2
+
FALSE
chr1
46076529
A
G
0.00196
NASP
+
TRUE
AluSx
SINE,Alu
chr1
121133998
T
A
0.00171
SRGAP2-AS1,SRGAP2B,SRGAP2C
+,-
FALSE
L1MB4
SINE,Alu
chr1
10521238
T
C
0.00795
DFFA
-
TRUE
AluY
SINE,Alu
chr1
93308168
T
A
0.00314
FAM69A
-
FALSE
chr1
33147942
A
G
0.00423
SYNC,RBBP4
+,-
FALSE
AluSx
SINE,Alu
chr1
67875026
A
T
0.00557
SERBP1
-
FALSE
Showing 1 to 10 of 462 entries
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression