| RBP | GTF2F1 |
| Knock-Method | shRNA |
| RBP Family | Non-canonical_RBP |
| Biosample Name | K562 |
| Tissue Type | Haematopoietic_and_lymphoid_tissue |
| Biosample Type | Cell line |
| # of Control | 2 |
| # of Treat | 2 |
| Species | Human |
| Data Source | ENCODE |
| Profile ID | ENCSR188IPO |
| Platform | HiSeq |
| Pubmed ID | 32252787 |
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| Chrom | Site | Ref_allele | Alt_allele | Pvalue | Genename | Strand | KnownRNAediting | RepeatName | RepeatFamily |
|---|---|---|---|---|---|---|---|---|---|
| chr17 | 57279281 | A | G | 0.00055 | PRR11 | + | TRUE | AluSq2 | SINE,Alu |
| chr1 | 1288481 | C | A | 0.00013 | MXRA8 | - | FALSE | ||
| chr1 | 94930345 | G | A | 0.00223 | ABCD3 | + | FALSE | ||
| chr1 | 178887208 | A | T | 0.00239 | RALGPS2 | + | FALSE | ||
| chr1 | 40219065 | C | T | 0.00232 | PPIE | + | FALSE | ||
| chr1 | 36067870 | T | C | 0.00513 | PSMB2 | - | TRUE | AluSz | SINE,Alu |
| chr1 | 109240642 | A | C | 0.00373 | PRPF38B | + | FALSE | ||
| chr14 | 50792933 | C | T | 0.00156 | ATP5S | + | FALSE | AluSx | SINE,Alu |
| chr1 | 110040310 | A | G | 2.45230E-05 | CYB561D1 | + | FALSE | ||
| chr1 | 95658346 | T | A | 0.00961 | TMEM56-RWDD3,LOC101928118,TMEM56 | +,- | FALSE | ||
| chr2 | 88895123 | T | C | 0.00706 | EIF2AK3 | - | FALSE | ||
| chr1 | 109818162 | T | C | 0.00253 | CELSR2 | + | FALSE | ||
| chr3 | 45722381 | A | G | 0.00996 | LIMD1,LIMD1-AS1 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 145693958 | A | G | 3.55543E-06 | NBPF20,NBPF10 | + | TRUE | AluSz | SINE,Alu |
| chr1 | 156084582 | T | C | 0.00195 | LMNA | + | FALSE | ||
| chr1 | 46828653 | T | A | 0.00920 | NSUN4 | + | FALSE | ||
| chr2 | 100897573 | G | A | 0.00231 | LONRF2 | - | FALSE | ||
| chr5 | 81571876 | A | T | 0.00013 | RPS23 | - | FALSE | ||
| chr1 | 25894468 | C | G | 0.00357 | LDLRAP1 | + | FALSE | MIRb | SINE,Alu |
| chr5 | 81571875 | A | T | 0.00072 | RPS23 | - | FALSE | ||
| chr8 | 145159708 | A | G | 0.00101 | MAF1 | + | FALSE | ||
| chr12 | 98942824 | A | G | 2.17067E-06 | TMPO | + | TRUE | AluSc | SINE,Alu |
| chr15 | 42503334 | C | T | 0.00448 | TMEM87A | - | FALSE | (T)n | SINE,Alu |
| chr2 | 201676441 | G | A | 0.00140 | LOC101927795,BZW1 | +,- | FALSE | ||
| chr12 | 7052982 | T | G | 0.00199 | C12orf57 | + | FALSE | U7 | SINE,Alu |
| chr5 | 68426312 | G | A | 0.00344 | SLC30A5 | + | FALSE | ||
| chr12 | 69160464 | A | G | 0.00041 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 85278156 | C | T | 0.00663 | . | FALSE | AluSz6 | SINE,Alu | |
| chr6 | 126661502 | G | T | 0.00873 | CENPW | + | FALSE | ||
| chr4 | 17629921 | A | G | 0.00454 | . | FALSE | MER90 | SINE,Alu | |
| chr3 | 81698130 | T | C | 2.93981E-08 | GBE1 | - | FALSE | ||
| chr4 | 67846 | C | A | 0.00573 | ZNF718,ZNF595 | + | FALSE | AluYk3 | SINE,Alu |
| chr1 | 193054154 | G | A | 0.00757 | TROVE2 | + | FALSE | ||
| chr2 | 38975954 | A | C | 0.00381 | SRSF7 | - | FALSE | ||
| chr2 | 233446266 | C | T | 0.00177 | EIF4E2 | + | FALSE | ||
| chr1 | 53289940 | A | G | 0.00245 | ZYG11B | + | TRUE | FRAM | SINE,Alu |
| chr2 | 217366197 | T | A | 0.00018 | . | FALSE | |||
| chr1 | 11979809 | A | C | 0.00836 | KIAA2013 | - | FALSE | ||
| chr1 | 33148216 | A | G | 0.00824 | SYNC,RBBP4 | +,- | FALSE | AluSg | SINE,Alu |
| chr3 | 125248854 | A | C | 0.00014 | OSBPL11 | - | FALSE | ||
| chr1 | 203713133 | G | A | 0.00984 | ATP2B4 | + | FALSE | ||
| chr1 | 46075709 | A | G | 0.00431 | NASP | + | TRUE | AluSx4 | SINE,Alu |
| chr11 | 31452750 | A | G | 0.00326 | DNAJC24 | + | TRUE | AluSx1 | SINE,Alu |
| chr2 | 25042625 | C | G | 0.00766 | CENPO,ADCY3 | +,- | FALSE | ||
| chr1 | 16893721 | A | C | 0.00179 | NBPF1 | - | FALSE | ||
| chr1 | 3731655 | G | T | 0.00985 | CEP104 | - | FALSE | ||
| chr2 | 86947783 | C | T | 0.00515 | RNF103-CHMP3,RMND5A | +,- | FALSE | ||
| chr17 | 61502458 | T | A | 0.00317 | TANC2 | + | FALSE | ||
| chr12 | 125512444 | A | G | 4.63106E-05 | . | FALSE | AluY | SINE,Alu | |
| chr1 | 52375424 | T | C | 0.00109 | RAB3B | - | FALSE | ||
| chr7 | 19736460 | A | G | 6.53378E-05 | TWISTNB | - | FALSE | MER33 | SINE,Alu |
| chr2 | 37331025 | T | C | 0.00055 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 53291425 | A | G | 0.00517 | ZYG11B | + | TRUE | AluJr | SINE,Alu |
| chr3 | 12624321 | A | G | 2.86985E-06 | MKRN2 | + | FALSE | ||
| chr3 | 169807548 | T | C | 0.00665 | PHC3 | - | TRUE | AluSx1 | SINE,Alu |
| chr1 | 28864435 | A | G | 0.00088 | RCC1 | + | FALSE | ||
| chr1 | 225683184 | G | T | 0.00741 | ENAH | - | FALSE | ||
| chr6 | 25600772 | A | G | 0.00269 | CARMIL1 | + | FALSE | ||
| chr6 | 90344221 | T | C | 0.00809 | LYRM2 | - | TRUE | AluJo | SINE,Alu |
| chr1 | 144932151 | G | T | 0.00643 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr1 | 211923085 | T | G | 0.00674 | LPGAT1 | - | FALSE | ||
| chr1 | 6283260 | T | C | 0.00054 | ICMT | - | TRUE | AluSx3 | SINE,Alu |
| chr4 | 165998019 | T | C | 0.00849 | TMEM192 | - | TRUE | AluSx | SINE,Alu |
| chr2 | 9630231 | C | T | 0.00895 | ADAM17 | - | FALSE | ||
| chr1 | 117644949 | C | G | 0.00440 | TTF2 | + | FALSE | ||
| chr2 | 232325426 | A | T | 0.00547 | NCL | - | FALSE | (TCA)n | SINE,Alu |
| chr4 | 52888499 | G | A | 8.91315E-05 | SGCB | - | FALSE | ||
| chr2 | 217366570 | A | G | 0.00332 | . | FALSE | AluSz | SINE,Alu | |
| chr1 | 15818081 | T | C | 9.65448E-05 | CASP9 | - | TRUE | AluJb | SINE,Alu |
| chr4 | 7764017 | T | C | 0.00028 | AFAP1,AFAP1-AS1 | +,- | FALSE | ||
| chr12 | 32532505 | G | A | 0.00385 | . | FALSE | |||
| chr10 | 95163809 | G | T | 0.00453 | MYOF | - | FALSE | ||
| chr1 | 28835847 | A | G | 4.14471E-06 | SNHG3,RCC1 | + | TRUE | AluSx4 | SINE,Alu |
| chr1 | 16577908 | G | C | 0.00686 | FBXO42 | - | FALSE | ||
| chr2 | 8823941 | G | A | 0.00053 | ID2 | + | FALSE | ||
| chr5 | 40826638 | C | A | 0.00749 | LOC100506548 | - | FALSE | LTR78 | SINE,Alu |
| chr1 | 156675377 | G | C | 0.00935 | CRABP2 | - | FALSE | ||
| chr1 | 10520117 | T | C | 0.00188 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 19670869 | A | G | 0.00568 | CAPZB | - | FALSE | ||
| chr4 | 17803616 | T | C | 0.00046 | DCAF16 | - | TRUE | AluY | SINE,Alu |
| chr9 | 125609940 | T | A | 0.00044 | . | FALSE | |||
| chr1 | 900721 | T | C | 0.00032 | KLHL17 | + | FALSE | (TTTA)n | SINE,Alu |
| chr2 | 227660628 | T | G | 0.00025 | IRS1 | - | FALSE | ||
| chr2 | 37327666 | T | C | 0.00028 | . | FALSE | |||
| chr1 | 144932200 | G | T | 0.00492 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr4 | 144442611 | T | C | 0.00899 | SMARCA5 | + | FALSE | ||
| chr1 | 45975331 | A | G | 0.00081 | MMACHC | + | TRUE | AluSg7 | SINE,Alu |
| chr9 | 136209402 | A | G | 0.00431 | MED22 | - | FALSE | (CAGGG)n | SINE,Alu |
| chr2 | 217366674 | A | G | 0.00219 | . | FALSE | AluSz | SINE,Alu | |
| chr1 | 33148361 | G | C | 0.00428 | SYNC,RBBP4 | +,- | FALSE | AluSg | SINE,Alu |
| chr1 | 145281656 | A | T | 0.00202 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr16 | 66923452 | A | G | 0.00065 | PDP2 | + | TRUE | AluSz | SINE,Alu |
| chr1 | 109818161 | C | T | 0.00382 | CELSR2 | + | FALSE | ||
| chr1 | 36614708 | C | T | 0.00201 | TRAPPC3 | - | FALSE | ||
| chr8 | 27661063 | T | A | 0.00138 | ESCO2 | + | FALSE | (AC)n | SINE,Alu |
| chr1 | 19585493 | A | G | 0.00199 | MRTO4 | + | TRUE | AluSc8 | SINE,Alu |
| chr2 | 206983797 | T | C | 0.00145 | . | FALSE | AluSx | SINE,Alu | |
| chr2 | 67631831 | G | A | 0.00423 | ETAA1 | + | FALSE | ||
| chr2 | 178129412 | G | T | 0.00071 | NFE2L2 | - | FALSE | (CGG)n | SINE,Alu |
| chr1 | 156044213 | G | T | 7.72130E-05 | MEX3A | - | FALSE | (T)n | SINE,Alu |
| chr15 | 41590972 | A | G | 2.40282E-05 | OIP5-AS1 | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 38155699 | T | G | 0.00824 | C1orf109 | - | FALSE | AluSx1 | SINE,Alu |
| chr3 | 122283291 | C | A | 0.00061 | DTX3L,PARP9 | +,- | FALSE | ||
| chr1 | 19542269 | T | C | 0.00744 | LOC101927895,EMC1 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 1549354 | G | A | 0.00383 | . | FALSE | HAL1 | SINE,Alu | |
| chr6 | 42855979 | A | G | 8.12389E-06 | RPL7L1 | + | TRUE | AluSz | SINE,Alu |
| chr2 | 37331116 | T | C | 0.00481 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 148251009 | T | C | 0.00065 | NBPF8,NBPF14,NBPF9 | - | TRUE | ||
| chr16 | 48388382 | A | G | 0.00301 | MIR5095 | + | TRUE | AluSz | SINE,Alu |
| chr7 | 158590740 | A | T | 0.00211 | ESYT2 | - | FALSE | ||
| chr1 | 15736656 | A | G | 0.00958 | EFHD2 | + | FALSE | ||
| chr2 | 206480819 | C | T | 0.00663 | PARD3B | + | FALSE | ||
| chr3 | 68685888 | G | A | 0.00280 | . | FALSE | |||
| chr17 | 57281034 | A | G | 0.00111 | PRR11 | + | TRUE | AluSz | SINE,Alu |
| chr3 | 127790249 | A | G | 0.00056 | RUVBL1,SEC61A1 | +,- | FALSE | ||
| chr4 | 2931174 | T | C | 0.00211 | ADD1 | + | FALSE | ||
| chr1 | 10517512 | T | C | 0.00646 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 153599390 | T | C | 0.00135 | S100A13 | - | FALSE | ||
| chr3 | 156258283 | T | C | 0.00686 | SSR3 | - | TRUE | AluYk3 | SINE,Alu |
| chr1 | 16946437 | C | T | 0.00257 | CROCCP2 | - | FALSE | ||
| chr1 | 16529016 | C | T | 0.00024 | ARHGEF19 | - | FALSE | ||
| chr1 | 10520819 | T | C | 0.00022 | DFFA | - | TRUE | AluSc8 | SINE,Alu |
| chr4 | 89181451 | T | C | 8.32748E-05 | PPM1K | - | TRUE | AluSx1 | SINE,Alu |
| chr3 | 196557356 | T | A | 0.00032 | PAK2 | + | FALSE | ||
| chr2 | 206987632 | T | C | 0.00671 | . | FALSE | AluJb | SINE,Alu | |
| chr19 | 2426238 | T | G | 0.00129 | TIMM13,TMPRSS9 | +,- | FALSE | ||
| chr2 | 198572083 | T | A | 0.00272 | MARS2 | + | FALSE | ||
| chr1 | 25889571 | G | A | 0.00344 | LDLRAP1 | + | FALSE | ||
| chr2 | 128064446 | G | T | 0.00652 | MAP3K2 | - | FALSE | (GT)n | SINE,Alu |
| chr1 | 3395039 | G | A | 0.00027 | ARHGEF16 | + | FALSE | ||
| chr1 | 38423181 | T | G | 0.00793 | SF3A3 | - | FALSE | AluJo | SINE,Alu |
| chr16 | 10625108 | T | C | 7.88488E-10 | EMP2 | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 214529320 | T | G | 0.00365 | PTPN14 | - | FALSE | AluJb | SINE,Alu |
| chr10 | 13234356 | A | T | 3.19668E-07 | MCM10 | + | FALSE | ||
| chr5 | 1574319 | T | A | 0.00158 | SDHAP3 | - | FALSE | ||
| chr4 | 177252326 | A | G | 0.00554 | SPCS3 | + | TRUE | ||
| chr2 | 11321779 | A | T | 0.00033 | ROCK2 | - | FALSE | AluSx1 | SINE,Alu |
| chr10 | 11912065 | C | G | 0.00191 | PROSER2-AS1,PROSER2 | +,- | FALSE | ||
| chr7 | 43679092 | G | C | 1.19724E-06 | COA1 | - | FALSE | ||
| chr1 | 55317685 | G | A | 0.00121 | DHCR24 | - | FALSE | MIRb | SINE,Alu |
| chr5 | 159492103 | T | G | 0.00332 | TTC1 | + | FALSE | ||
| chr2 | 217366897 | A | G | 0.00440 | . | FALSE | AluSz6 | SINE,Alu | |
| chr1 | 95362514 | G | T | 0.00279 | CNN3 | - | FALSE | ||
| chr1 | 6160958 | A | G | 0.00967 | KCNAB2 | + | FALSE | ||
| chr8 | 62538200 | A | T | 0.00552 | ASPH | - | FALSE | ||
| chr3 | 44485914 | T | C | 0.00920 | ZNF445 | - | FALSE | MIRb | SINE,Alu |
| chr2 | 37330487 | T | C | 0.00242 | . | FALSE | AluSq2 | SINE,Alu | |
| chr12 | 133297956 | A | G | 4.23080E-06 | PGAM5 | + | TRUE | AluJo | SINE,Alu |
| chr1 | 95362949 | A | T | 0.00012 | CNN3 | - | FALSE | (A)n | SINE,Alu |
| chr1 | 41326886 | C | G | 0.00085 | CITED4 | - | FALSE | ||
| chr1 | 201845882 | G | A | 0.00890 | IPO9 | + | FALSE | ||
| chr1 | 109240641 | T | A | 0.00090 | PRPF38B | + | FALSE | ||
| chr1 | 205737659 | C | T | 0.00024 | RAB29 | - | FALSE | AluSq2 | SINE,Alu |
| chr1 | 16893691 | C | A | 0.00764 | NBPF1 | - | FALSE | ||
| chr1 | 10520153 | T | C | 0.00907 | . | FALSE | AluSx | SINE,Alu | |
| chr6 | 160101723 | T | C | 0.00234 | SOD2 | - | TRUE | AluSz | SINE,Alu |
| chr1 | 92975244 | T | A | 0.00220 | EVI5 | - | FALSE | ||
| chr17 | 60522250 | A | G | 0.00267 | METTL2A | + | FALSE | ||
| chr3 | 122293773 | A | T | 0.00852 | DTX3L | + | FALSE | ||
| chr3 | 56763328 | T | C | 0.00546 | ARHGEF3 | - | FALSE | ||
| chr5 | 43380781 | T | C | 0.00739 | CCL28 | - | TRUE | AluJb | SINE,Alu |
| chr5 | 122359498 | A | C | 0.00362 | PPIC | - | FALSE | (AC)n | SINE,Alu |
| chr7 | 6063466 | T | A | 0.00153 | EIF2AK1 | - | FALSE | ||
| chr2 | 178406762 | G | T | 0.00708 | AGPS | + | FALSE | ||
| chr1 | 100654769 | T | C | 0.00318 | DBT | - | TRUE | AluSz | SINE,Alu |
| chr1 | 63881552 | C | T | 0.00293 | ALG6 | + | FALSE | ||
| chr1 | 146215189 | G | C | 0.00226 | NBPF20,NBPF10,NBPF25P | + | FALSE | ||
| chr3 | 185826740 | T | G | 0.00041 | ETV5 | - | FALSE | ||
| chr2 | 206984202 | T | C | 0.00849 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 145281633 | C | A | 0.00022 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr1 | 9163465 | T | C | 0.00342 | . | FALSE | AluSp | SINE,Alu | |
| chr16 | 58195430 | G | C | 0.00325 | CSNK2A2 | - | FALSE | (AC)n | SINE,Alu |
| chr1 | 120612037 | T | G | 0.00044 | NOTCH2 | - | FALSE | (CGC)n | SINE,Alu |
| chr3 | 45126558 | C | T | 0.00000 | CDCP1 | - | FALSE | ||
| chr17 | 65335362 | T | C | 3.02375E-05 | PSMD12 | - | TRUE | AluSx | SINE,Alu |
| chr3 | 195961254 | C | T | 0.00119 | . | FALSE | |||
| chr1 | 160965287 | T | C | 0.00766 | F11R | - | TRUE | AluSc | SINE,Alu |
| chr16 | 10626615 | C | T | 0.00489 | EMP2 | - | FALSE | (T)n | SINE,Alu |
| chr7 | 138730361 | T | C | 0.00316 | ZC3HAV1 | - | FALSE | L2-1_AMi | SINE,Alu |
| chr1 | 24935369 | A | G | 0.00454 | NCMAP | + | TRUE | AluJb | SINE,Alu |
| chr2 | 207942527 | A | T | 0.00107 | KLF7 | - | FALSE | ||
| chr12 | 56510710 | A | C | 0.00050 | RPL41 | + | FALSE | ||
| chr3 | 37031951 | G | A | 0.00154 | EPM2AIP1 | - | FALSE | (A)n | SINE,Alu |
| chr1 | 54692331 | T | C | 0.00549 | SSBP3 | - | FALSE | (T)n | SINE,Alu |
| chr2 | 37327662 | T | C | 0.00058 | . | FALSE | |||
| chr1 | 19543456 | T | C | 0.00386 | LOC101927895,EMC1 | +,- | FALSE | AluJb | SINE,Alu |
| chr12 | 56510697 | G | A | 0.00989 | RPL41 | + | FALSE | ||
| chr1 | 46075604 | A | G | 0.00365 | NASP | + | TRUE | AluSx4 | SINE,Alu |
| chr19 | 39981168 | A | G | 0.00446 | TIMM50 | + | TRUE | AluJr | SINE,Alu |
| chr1 | 9160900 | T | C | 0.00010 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 28661767 | A | G | 0.00144 | MED18 | + | TRUE | AluSg | SINE,Alu |
| chr9 | 115446725 | T | C | 0.00037 | INIP | - | TRUE | AluJr | SINE,Alu |
| chr10 | 47221452 | T | C | 0.00869 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 89649522 | T | C | 0.00358 | GBP4 | - | TRUE | AluJb | SINE,Alu |
| chr1 | 16907328 | G | T | 0.00099 | NBPF1 | - | FALSE | ||
| chr1 | 207250570 | A | G | 0.00486 | PFKFB2 | + | FALSE | ||
| chr1 | 118472401 | C | T | 0.00396 | WDR3 | + | FALSE | ||
| chr1 | 120163248 | G | A | 4.97770E-06 | ZNF697 | - | FALSE | ||
| chr1 | 204521724 | A | G | 0.00851 | MDM4 | + | TRUE | AluSg | SINE,Alu |
| chr7 | 2767939 | T | C | 0.00028 | AMZ1,GNA12 | +,- | FALSE | ||
| chr3 | 183209052 | T | C | 0.00041 | KLHL6 | - | TRUE | AluSq | SINE,Alu |
| chr1 | 36534934 | A | G | 0.00464 | . | FALSE | AluJo | SINE,Alu | |
| chr1 | 36068369 | T | C | 5.31121E-05 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr1 | 33149496 | A | G | 0.00469 | SYNC,RBBP4 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr12 | 51325349 | C | G | 0.00225 | METTL7A | + | FALSE | AluSq2 | SINE,Alu |
| chr1 | 91486838 | G | C | 0.00514 | ZNF644 | - | FALSE | ||
| chr6 | 170887693 | G | C | 0.00045 | PDCD2 | - | FALSE | ||
| chr20 | 35409827 | T | C | 0.00267 | SOGA1 | - | TRUE | AluSx | SINE,Alu |
| chr3 | 14526656 | A | G | 0.00189 | SLC6A6 | + | FALSE | ||
| chr16 | 10625050 | T | C | 1.54421E-05 | EMP2 | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 121133733 | G | A | 0.00455 | SRGAP2-AS1,SRGAP2B,SRGAP2C | +,- | FALSE | L1MB4 | SINE,Alu |
| chr5 | 122359499 | C | A | 0.00277 | PPIC | - | FALSE | (AC)n | SINE,Alu |
| chr3 | 23958355 | C | T | 0.00997 | NKIRAS1,RPL15 | +,- | FALSE | ||
| chr15 | 41593268 | A | G | 0.00084 | . | FALSE | AluSz6 | SINE,Alu | |
| chr15 | 65442546 | T | C | 0.00564 | CLPX | - | TRUE | AluSg4 | SINE,Alu |
| chr1 | 9163400 | T | C | 0.00726 | . | FALSE | AluSp | SINE,Alu | |
| chr2 | 101635538 | C | T | 0.00069 | TBC1D8,RPL31 | +,- | FALSE | Charlie17 | SINE,Alu |
| chr2 | 201842323 | T | C | 0.00254 | FAM126B | - | TRUE | AluJb | SINE,Alu |
| chr7 | 75958149 | A | C | 0.00050 | YWHAG | - | FALSE | ||
| chr4 | 152025795 | T | A | 0.00516 | RPS3A | + | FALSE | ||
| chr3 | 58112440 | A | G | 8.00661E-07 | FLNB | + | FALSE | ||
| chr1 | 244869241 | C | A | 0.00213 | DESI2 | + | FALSE | ||
| chr1 | 44088547 | C | A | 0.00018 | PTPRF | + | FALSE | A-rich | SINE,Alu |
| chr3 | 196556843 | G | A | 4.00732E-06 | PAK2 | + | FALSE | ||
| chr1 | 67874859 | T | C | 0.00214 | SERBP1 | - | TRUE | AluSx | SINE,Alu |
| chr2 | 208619320 | A | G | 0.00339 | CCNYL1 | + | FALSE | EutTc1-N1 | SINE,Alu |
| chr2 | 17965390 | T | C | 0.00713 | GEN1 | + | FALSE | L1M4 | SINE,Alu |
| chr2 | 198255334 | A | T | 0.00551 | . | FALSE | |||
| chr19 | 39669600 | A | G | 0.00619 | PAK4 | + | FALSE | (TG)n | SINE,Alu |
| chr4 | 17628548 | A | G | 0.00991 | . | FALSE | AluSz | SINE,Alu | |
| chr2 | 178406765 | T | A | 0.00325 | AGPS | + | FALSE | ||
| chr1 | 206635247 | C | T | 0.00291 | SRGAP2 | + | FALSE | (AC)n | SINE,Alu |
| chr8 | 30536450 | T | C | 8.74573E-07 | GSR | - | TRUE | AluSp | SINE,Alu |
| chr1 | 27202831 | T | C | 0.00392 | . | FALSE | AluSq2 | SINE,Alu | |
| chr1 | 154321623 | G | A | 0.00782 | ATP8B2 | + | FALSE | ||
| chr1 | 19542401 | T | C | 0.00010 | LOC101927895,EMC1 | +,- | FALSE | AluSz | SINE,Alu |
| chr4 | 39551031 | T | C | 0.00068 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSz | SINE,Alu |
| chr3 | 15483744 | A | G | 0.00083 | EAF1 | + | FALSE | ||
| chr1 | 150704633 | T | C | 1.58455E-05 | CTSS | - | TRUE | AluJo | SINE,Alu |
| chr1 | 27992800 | C | A | 5.71645E-05 | IFI6 | - | FALSE | FAM | SINE,Alu |
| chr1 | 79126336 | C | G | 1.94494E-06 | IFI44 | + | FALSE | ||
| chr5 | 118731273 | A | C | 0.00843 | . | FALSE | |||
| chr1 | 144931101 | G | A | 0.00358 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr6 | 97592900 | C | A | 0.00076 | MMS22L | - | FALSE | ||
| chr1 | 160966434 | T | C | 0.00175 | F11R | - | TRUE | AluSg | SINE,Alu |
| chr9 | 128729384 | G | C | 0.00059 | PBX3 | + | FALSE | ||
| chr1 | 10519975 | T | C | 5.61936E-05 | . | FALSE | AluJr | SINE,Alu | |
| chr1 | 11141187 | C | G | 0.00819 | EXOSC10 | - | FALSE | ||
| chr1 | 74672323 | C | A | 0.00616 | FPGT-TNNI3K,FPGT | + | FALSE | X12_DNA | SINE,Alu |
| chr1 | 53289686 | A | G | 0.00063 | ZYG11B | + | TRUE | AluSz | SINE,Alu |
| chr15 | 40955103 | A | G | 0.00372 | . | FALSE | AluJb | SINE,Alu | |
| chr2 | 10179657 | A | C | 0.00035 | . | FALSE | L1ME4b | SINE,Alu | |
| chr1 | 33148691 | A | G | 0.00207 | SYNC,RBBP4 | +,- | FALSE | AluSc | SINE,Alu |
| chr3 | 112299732 | A | G | 0.00189 | SLC35A5 | + | FALSE | ||
| chr1 | 149818508 | T | C | 7.96693E-05 | . | FALSE | MLT1D | SINE,Alu | |
| chr1 | 2241376 | C | T | 0.01000 | SKI | + | FALSE | ||
| chr16 | 18794286 | C | T | 0.00633 | RPS15A | - | FALSE | ||
| chr1 | 19810693 | G | C | 0.00042 | CAPZB | - | FALSE | ||
| chr1 | 28662186 | A | G | 0.00403 | MED18 | + | TRUE | AluSq2 | SINE,Alu |
| chr1 | 1252723 | T | C | 7.44553E-05 | CPSF3L | - | TRUE | AluSp | SINE,Alu |
| chr7 | 26708303 | G | T | 0.00095 | SKAP2 | - | FALSE | AluSx3 | SINE,Alu |
| chr1 | 154554945 | A | G | 0.00877 | ADAR | - | FALSE | ||
| chr7 | 20177525 | T | C | 0.00052 | MACC1,LOC101927668 | - | TRUE | AluSx | SINE,Alu |
| chr6 | 52860746 | T | G | 0.00011 | . | FALSE | 7SK | SINE,Alu | |
| chr1 | 100654813 | T | C | 0.00352 | DBT | - | TRUE | AluSz | SINE,Alu |
| chr2 | 86252049 | T | C | 0.00271 | POLR1A | - | FALSE | AluSq2 | SINE,Alu |
| chr1 | 16945570 | A | G | 0.00131 | CROCCP2 | - | FALSE | ||
| chr1 | 1419746 | A | G | 0.00016 | ATAD3B | + | TRUE | AluYk2 | SINE,Alu |
| chr1 | 1662764 | T | C | 0.00505 | SLC35E2 | - | TRUE | AluY | SINE,Alu |
| chr4 | 7764148 | G | A | 2.22190E-11 | AFAP1,AFAP1-AS1 | +,- | FALSE | ||
| chr17 | 65334967 | T | C | 0.00045 | PSMD12 | - | TRUE | AluSq | SINE,Alu |
| chr1 | 24796069 | A | C | 0.00403 | NIPAL3 | + | FALSE |