RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr5	44818826	G	A	0.00595		.	FALSE
chr2	70504926	A	G	0.00671	PCYOX1	+	FALSE	MER5A	SINE,Alu
chr1	120695049	G	A	0.00129		.	FALSE
chr9	111781030	C	T	0.00413	TMEM245	-	FALSE	AluJb	SINE,Alu
chr8	42883403	A	G	0.00204	HOOK3	+	TRUE	AluJb	SINE,Alu
chr1	24288530	A	T	0.00031	PNRC2	+	FALSE
chr1	20976023	T	C	6.30669E-06	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr5	175802154	C	T	0.00883		.	FALSE	(CATC)n	SINE,Alu
chr1	6282383	T	C	0.00371	ICMT	-	TRUE	AluSz	SINE,Alu
chr16	10623571	T	C	0.00329	EMP2	-	TRUE	AluSp	SINE,Alu
chr15	78841543	T	A	0.00438	PSMA4	+	FALSE
chr1	6259433	G	A	0.00522	RPL22	-	FALSE	G-rich	SINE,Alu
chr16	15023271	G	A	0.00403		.	FALSE
chr3	176739158	C	A	0.00612	TBL1XR1	-	FALSE
chr22	36677546	T	G	0.00197	MYH9	-	FALSE
chr1	35658260	C	G	0.00477	SFPQ	-	FALSE
chr9	137330713	T	G	0.00021	RXRA	+	FALSE
chr1	10520487	T	C	0.00638		.	FALSE	AluSx1	SINE,Alu
chr1	10516656	C	T	0.00808		.	FALSE
chr4	189020293	G	A	0.00361	TRIML2	-	FALSE
chr3	125248855	C	A	0.00071	OSBPL11	-	FALSE
chr1	20238573	T	C	0.00204	OTUD3	+	FALSE
chr6	143382534	C	T	0.00252	AIG1	+	FALSE
chr17	28575454	A	C	0.00470	BLMH	-	FALSE
chr1	144521099	A	G	0.00682	NBPF20	+	FALSE
chr1	120695202	C	A	0.00033		.	FALSE
chr1	223945582	G	T	0.00304	CAPN2	+	FALSE	AluSx	SINE,Alu
chr1	2336210	C	T	0.00206	RER1	+	FALSE
chr2	37327677	T	C	0.00019		.	FALSE
chr1	36068210	T	C	0.00812	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	113511341	A	G	0.00283		.	FALSE	AluY	SINE,Alu
chr14	50792961	G	A	0.00547		.	FALSE	AluSx	SINE,Alu
chr1	9161218	T	C	0.00581		.	FALSE	AluSx	SINE,Alu
chr2	38522141	G	T	0.00109	ATL2	-	FALSE
chr1	25717365	C	G	0.00229	RHCE	-	FALSE
chr5	85916592	G	A	0.00018		.	FALSE
chr19	7116159	G	T	0.00368	INSR	-	FALSE
chr2	129024408	G	A	0.00502	HS6ST1	-	FALSE
chr1	144902696	A	T	0.00997	NBPF20,PDE4DIP	+,-	FALSE
chr1	113212984	C	T	7.79033E-05	CAPZA1	+	FALSE	(T)n	SINE,Alu
chr1	33068221	A	G	0.00448	ZBTB8A	+	TRUE	AluY	SINE,Alu
chr19	9673005	T	C	0.00017		.	FALSE	AluSx3	SINE,Alu
chr1	159887904	A	T	8.82173E-05	TAGLN2	-	FALSE
chr6	74134008	T	C	0.00337		.	FALSE	AluY	SINE,Alu
chr1	206635244	T	A	0.00188	SRGAP2	+	FALSE
chr13	20246634	T	G	0.00071	MPHOSPH8	+	FALSE
chr1	40214148	A	G	0.00426	PPIE	+	TRUE	AluSq2	SINE,Alu
chr1	167758262	C	T	0.00663	MPZL1	+	FALSE
chr19	39433139	T	G	0.00235	FBXO17	-	FALSE	AluJb	SINE,Alu
chr1	10517300	T	C	0.00113		.	FALSE	AluJr	SINE,Alu
chr1	120839681	C	A	0.00125	FAM72B	+	FALSE
chr4	5710647	A	G	5.78692E-06	EVC2	-	FALSE
chr1	93827990	C	A	0.00517	DR1	+	FALSE
chr1	160965379	T	C	0.00477	F11R	-	TRUE	AluSc	SINE,Alu
chr5	79276281	A	G	0.00026	MTX3	-	FALSE
chr3	50296330	G	A	0.00645	GNAI2	+	FALSE
chr1	93308168	T	A	0.00314	FAM69A	-	FALSE
chr4	67846	C	A	0.00573	ZNF718,ZNF595	+	FALSE	AluYk3	SINE,Alu
chr8	48889705	A	G	0.00339	MCM4	+	TRUE	AluSx3	SINE,Alu
chr22	18571343	A	G	0.00501	PEX26	+	TRUE	AluSz	SINE,Alu
chr16	75479891	T	C	9.48885E-06	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	109475427	T	C	0.00185	GPSM2,CLCC1	+,-	FALSE
chr1	32833539	T	C	1.95166E-05	BSDC1	-	TRUE
chr1	6282426	T	C	0.00513	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	38158705	G	A	0.00168	CDCA8	+	FALSE
chr19	7084578	A	G	0.00346	ZNF557	+	TRUE	AluJb	SINE,Alu
chr3	107765392	G	A	0.00038	CD47	-	FALSE
chr1	110951224	A	G	0.00352	LAMTOR5-AS1	+	TRUE	AluJr	SINE,Alu
chr14	92629726	T	A	0.00787	CPSF2	+	FALSE
chr1	10519982	T	C	0.00572		.	FALSE	AluJr	SINE,Alu
chr1	149816373	G	A	0.00364		.	FALSE	(A)n	SINE,Alu
chr1	158067061	G	T	0.00093	KIRREL	+	FALSE
chr5	138618619	A	G	0.00513	SNHG4,MATR3	+	TRUE	AluSx	SINE,Alu
chr1	145322843	C	T	0.00271	NBPF20,NBPF10	+	FALSE
chr3	179116220	T	C	0.00233	GNB4	-	TRUE	AluSz6	SINE,Alu
chr4	57326262	A	G	2.33397E-05	PAICS	+	TRUE	AluJr	SINE,Alu
chr7	96318078	A	T	0.00790		.	FALSE
chr1	32385070	T	A	0.00593	PTP4A2	-	FALSE
chr1	93308173	T	G	0.00380	FAM69A	-	FALSE
chr6	97592894	A	C	0.00654	MMS22L	-	FALSE
chr1	1683565	G	A	7.19943E-05	NADK	-	FALSE
chr1	234744480	G	A	0.00409	IRF2BP2	-	FALSE
chr1	36068276	T	C	0.00339	PSMB2	-	TRUE	AluSc	SINE,Alu
chr10	75009781	T	C	9.15447E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr2	223807817	A	C	0.00991	ACSL3	+	FALSE	(A)n	SINE,Alu
chr1	109818161	C	T	0.00382	CELSR2	+	FALSE
chr1	900505	G	C	0.00388	KLHL17	+	FALSE
chr1	76229120	T	C	0.00309	ACADM	+	FALSE
chr6	79647408	T	G	0.00561	PHIP	-	FALSE
chr5	125961532	A	G	0.00039	PHAX	+	TRUE	AluSz6	SINE,Alu
chr5	43527402	T	C	0.00539	PAIP1	-	FALSE
chr1	155695998	A	G	0.00574	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	213069114	C	A	0.00681	FLVCR1	+	FALSE
chr1	1337737	G	C	2.51903E-05	MRPL20	-	FALSE
chr1	31732601	A	T	0.00175	SNRNP40	-	FALSE
chr1	94351062	T	A	0.00189	GCLM	-	FALSE
chr21	37789499	A	G	0.00889		.	FALSE	AluJb	SINE,Alu
chr1	10520692	T	C	0.00973	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	16112795	A	G	0.00106	FBLIM1	+	FALSE
chr2	191799592	A	G	0.00021	GLS	+	TRUE
chr10	75009592	T	C	1.74317E-07	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr5	17276088	C	A	0.00171	BASP1	+	FALSE	(TC)n	SINE,Alu
chr2	37328087	T	C	0.00313		.	FALSE
chr1	54231849	C	T	0.00812	NDC1	-	FALSE
chr1	2520435	G	C	0.00041	FAM213B	+	FALSE
chr15	91044377	T	C	0.00440	IQGAP1	+	FALSE
chr17	38512480	C	T	0.00725	RARA	+	FALSE
chr10	70742774	A	T	0.00504	DDX21	+	FALSE
chr1	36924851	T	C	0.00493	MRPS15	-	TRUE	AluJb	SINE,Alu
chr4	128756579	A	G	0.00501		.	FALSE	AluSx	SINE,Alu
chr2	37478348	T	A	0.00392	PRKD3	-	FALSE
chr10	82192266	A	G	0.00391	FAM213A	+	TRUE	AluSx1	SINE,Alu
chr1	109240643	A	C	0.00608	PRPF38B	+	FALSE
chr3	14986110	T	C	0.00632	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr7	64435677	G	A	0.00366	ZNF117	-	FALSE
chr1	27202812	T	C	0.00356		.	FALSE	AluSq2	SINE,Alu
chr1	10517300	T	C	0.00011		.	FALSE	AluJr	SINE,Alu
chr1	26765033	A	G	0.00324	DHDDS	+	TRUE	AluJr	SINE,Alu
chr1	145689271	A	G	0.00250	NBPF20,NBPF10	+	FALSE
chr1	33148706	A	G	0.00038	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	1571802	G	A	0.00067	CDK11B	-	FALSE
chr1	16895634	T	G	0.00472	NBPF1	-	FALSE
chr1	165631670	T	G	0.00197	ALDH9A1	-	FALSE
chr1	16893822	C	T	0.00808	NBPF1	-	FALSE
chr1	6162583	G	A	0.00281	CHD5	-	FALSE
chr17	42876398	T	C	0.00697	GJC1	-	FALSE	AluSz6	SINE,Alu
chr3	99517483	C	T	0.00070	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr1	16933135	G	T	0.00937	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	65298625	G	A	0.00761	RAVER2	+	FALSE	X12_DNA	SINE,Alu
chr1	10520099	T	C	5.82547E-06		.	FALSE	AluSx	SINE,Alu
chr5	43377330	T	C	0.00039	CCL28	-	TRUE	AluSz	SINE,Alu
chr1	16889639	T	C	0.00745	NBPF1	-	TRUE
chr1	10517276	T	C	0.00779		.	FALSE	AluJr	SINE,Alu
chr1	10042987	A	G	8.46336E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr3	179117663	G	C	6.59793E-05	GNB4	-	FALSE
chr10	102308803	G	C	0.00324	HIF1AN	+	FALSE	(GT)n	SINE,Alu
chr21	34730010	A	G	0.00518	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr17	79674375	C	T	0.00129	MRPL12	+	FALSE
chr2	32535568	A	G	0.00016		.	FALSE	MER8	SINE,Alu
chr1	201846617	A	C	0.00380	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	6354955	G	A	0.00090	ACOT7	-	FALSE
chr1	32373854	A	T	0.00096	PTP4A2	-	FALSE
chr9	34088016	G	A	0.00226	DCAF12	-	FALSE
chr3	99515750	A	G	2.61553E-11	MIR548G	-	FALSE
chr2	28636644	A	G	0.00269	FOSL2	+	FALSE
chr1	87200770	C	T	0.00623	SH3GLB1	+	FALSE
chr1	220231276	T	C	0.00545	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr14	23795204	G	T	0.00938	BCL2L2-PABPN1,PABPN1	+	FALSE
chr1	118066459	A	G	0.00496	MAN1A2	+	FALSE
chr1	109818162	T	C	0.00253	CELSR2	+	FALSE
chr1	67874859	T	C	1.49998E-05	SERBP1	-	TRUE	AluSx	SINE,Alu
chr9	19376250	A	T	0.00706		.	FALSE
chr7	44918804	T	C	0.00015	PURB	-	TRUE	AluSg	SINE,Alu
chr3	39452945	T	A	0.00462	RPSA	+	FALSE	MER5B	SINE,Alu
chr1	41088377	C	T	2.57179E-08	RIMS3	-	FALSE
chr1	3546128	A	G	0.00213	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr9	100777784	T	A	0.00080	ANP32B	+	FALSE
chr7	86816663	A	G	0.00103	DMTF1	+	TRUE	AluJr	SINE,Alu
chr1	142688506	T	C	0.00337		.	FALSE
chr1	10517689	T	C	0.00504		.	FALSE	AluSx1	SINE,Alu
chr1	201846635	A	T	0.00293	IPO9	+	FALSE	(CA)n	SINE,Alu
chr3	58306686	A	G	0.00970		.	FALSE	AluSz	SINE,Alu
chr3	45722381	A	G	0.00996	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	23636030	A	T	0.00067	HNRNPR	-	FALSE
chr1	144595935	G	A	0.00837	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	10517290	T	C	0.00437		.	FALSE	AluJr	SINE,Alu
chr7	66421684	T	G	0.00042	TMEM248	+	FALSE	AluJr	SINE,Alu
chr5	137842895	A	T	0.00038	ETF1	-	FALSE
chr8	71550832	T	C	0.00725	LACTB2-AS1,LACTB2	+,-	FALSE
chr3	42689777	T	G	0.00696	NKTR,LOC101928323	+,-	FALSE	MLT1E3	SINE,Alu
chr1	10520378	T	C	0.00895		.	FALSE	AluSx1	SINE,Alu
chr1	23636277	A	T	0.00632	HNRNPR	-	FALSE
chr1	16203172	A	G	8.98827E-07	SPEN	+	FALSE
chr7	6442892	C	A	0.00675	RAC1	+	FALSE
chr6	3021448	T	C	0.00126	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr7	64435684	T	G	0.00239	ZNF117	-	FALSE
chr7	129251289	C	T	0.00808		.	FALSE
chr1	33961147	T	G	0.00236	ZSCAN20	+	FALSE
chr4	38946758	G	A	0.00294	FAM114A1	+	FALSE
chr3	196078364	G	A	6.64958E-05		.	FALSE	GA-rich	SINE,Alu
chr14	53242417	T	C	0.00423	GNPNAT1	-	TRUE	AluJo	SINE,Alu
chr1	197128726	G	A	2.50329E-05	ZBTB41	-	FALSE
chr12	125511312	A	G	0.00638	THRIL	-	FALSE	AluSx1	SINE,Alu
chr7	138764145	T	C	0.00399	ZC3HAV1	-	FALSE
chr2	152334389	A	G	0.00308		.	FALSE	AluSq	SINE,Alu
chr3	182661952	C	T	0.00438	DCUN1D1	-	FALSE	A-rich	SINE,Alu
chr1	1597403	C	T	0.00912	CDK11B,SLC35E2B	-	FALSE
chr6	44222158	T	A	0.00856	SLC35B2	-	FALSE
chr1	113243048	C	T	0.00941	MOV10	+	FALSE
chr1	10093749	T	C	0.00521	UBE4B	+	FALSE
chr2	27279013	A	G	6.08626E-07	AGBL5	+	FALSE
chr1	179042697	A	G	0.00092	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	36067821	T	C	8.78017E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	10518591	A	T	0.00169		.	FALSE
chr3	101405563	A	G	0.00511	RPL24	-	FALSE
chr1	10518875	T	C	0.00127		.	FALSE	AluSx1	SINE,Alu
chr2	85772407	T	A	0.00232	GGCX	-	FALSE
chr2	23926233	C	T	0.00907	KLHL29	+	FALSE
chr17	74710572	T	C	0.00594	JMJD6	-	FALSE
chr1	144821900	C	G	6.24876E-05	NBPF20,NBPF9	+	FALSE
chr3	119212012	A	C	0.00976	POGLUT1	+	FALSE
chr1	179829595	T	C	0.00188	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	33149443	A	G	2.90388E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr15	42860120	A	G	0.00045	HAUS2	+	TRUE	AluSg	SINE,Alu
chr1	16958064	A	G	0.00240		.	FALSE
chr1	114940209	G	T	0.00638	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	21810903	A	G	0.00154	NBPF3	+	FALSE	L1MC4	SINE,Alu
chr1	142688597	C	T	0.00605		.	FALSE
chr5	41917695	C	T	0.00019	C5orf51	+	FALSE
chr3	49395691	C	T	0.00037	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr14	90509587	G	T	0.00203	TDP1	+	FALSE
chr4	41673604	T	C	0.00580	LIMCH1	+	FALSE
chr1	204525713	A	G	0.00501	MDM4	+	TRUE	AluSz	SINE,Alu
chr2	9630248	G	T	0.00764	ADAM17	-	FALSE
chr12	133298465	A	G	5.98085E-08	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	31732677	G	A	0.00030	SNRNP40	-	FALSE	A-rich	SINE,Alu
chr1	33149376	A	G	0.00357	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	16889624	T	C	0.00794	NBPF1	-	TRUE
chr6	74493432	A	C	0.00611	CD109	+	FALSE
chr8	48889633	A	G	0.00299	MCM4	+	TRUE	AluSx3	SINE,Alu
chr15	40954864	A	G	0.00636	KNL1	+	TRUE
chr6	3021352	T	C	0.00082	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr1	53288897	A	G	0.00439	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	85824712	C	A	0.00663	RNF181	+	FALSE
chr1	145511958	A	G	0.00038	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	45244411	C	A	0.00234	RPS8	+	FALSE
chr1	53289860	A	G	6.18707E-07	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr2	192555178	C	T	0.00112	LOC105747689	+	FALSE
chr1	78142985	T	C	0.00012	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr4	39551018	T	C	0.00224	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	100615003	G	A	0.00046	TRMT13,LRRC39	+,-	FALSE
chr5	41917697	A	T	0.00051	C5orf51	+	FALSE
chr1	117910682	G	A	0.00013	MAN1A2	+	FALSE
chr4	2940125	T	C	4.75438E-05	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	214524576	T	C	0.00060	PTPN14	-	TRUE	AluSg	SINE,Alu
chr2	233446265	T	C	0.00177	EIF4E2	+	FALSE
chr1	64095111	A	G	0.00201	PGM1	+	FALSE
chr1	153907287	G	C	0.00122	DENND4B	-	FALSE	(CTG)n	SINE,Alu
chr6	36894339	G	A	0.00650	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr3	124488267	G	A	3.46260E-06	ITGB5	-	FALSE
chr1	9160963	T	C	0.00098		.	FALSE	AluJb	SINE,Alu
chr1	33149486	A	G	5.00374E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	28835934	A	G	0.00596	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	19934793	G	A	0.00376	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	36067760	T	C	0.00021	PSMB2	-	TRUE	AluSz	SINE,Alu
chr7	38764395	T	C	0.00139	VPS41	-	TRUE	AluSp	SINE,Alu
chr7	20177613	T	C	0.00913	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr9	80886829	C	A	6.48097E-06		.	FALSE	(TTTCTTTT)n	SINE,Alu
chr2	24227417	A	G	0.00831		.	FALSE	AluSc	SINE,Alu
chr2	55516938	A	T	0.00265	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	145513114	A	G	0.00026	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	155572129	C	T	0.00082	SLC33A1	-	FALSE
chr1	19543457	T	C	0.00718	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	22419434	T	G	0.00649	CDC42	+	FALSE
chr2	106510202	C	T	0.00854	NCK2	+	FALSE
chr5	17276078	C	A	0.00011	BASP1	+	FALSE	(TC)n	SINE,Alu
chr1	9643054	A	G	5.80579E-05		.	FALSE	AluSx	SINE,Alu
chr1	77556766	T	A	0.00576	PIGK	-	FALSE
chr1	35649749	C	A	0.00597	SFPQ	-	FALSE
chr1	168220529	A	G	0.00161		.	FALSE	AluSz6	SINE,Alu
chr1	24864008	A	G	0.00601		.	FALSE
chr4	89181478	T	C	0.00656	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	20977748	T	G	0.00474	PINK1,PINK1-AS	+,-	FALSE
chr1	10502831	A	G	0.00193	APITD1,APITD1-CORT	+	FALSE
chr4	1388115	C	G	0.00682	CRIPAK	+	FALSE	L1MB4	SINE,Alu
chr3	182632684	G	A	0.00116	ATP11B	+	FALSE
chr7	75145495	G	A	5.48132E-07	PMS2P3	-	FALSE
chr1	145281543	C	T	0.00031	NBPF20,NOTCH2NL	+	FALSE
chr7	937828	G	A	0.00605	ADAP1	-	FALSE
chr1	56961756	A	G	0.00682	PLPP3	-	FALSE
chr1	53288862	A	G	0.00799	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	44463185	T	G	0.00427	SLC6A9	-	FALSE
chr5	125961455	A	G	0.00029	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	36067760	T	C	0.00768	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	68858545	C	G	0.00268	GTF2H2C,GTF2H2C_2	+	FALSE	AluSz	SINE,Alu
chr5	65120054	C	T	0.00625	NLN	+	FALSE
chr1	120162442	T	C	0.00065	ZNF697	-	FALSE
chr1	31344952	C	T	0.00842	SDC3	-	FALSE
chr2	191745653	T	G	0.00799	GLS	+	FALSE
chr1	145293498	G	C	0.00154	NBPF20,NBPF10	+	FALSE
chr1	169293721	G	A	0.00978	NME7	-	FALSE
chr1	16384843	G	C	0.00049	FAM131C	-	FALSE
chr1	46164493	T	C	0.00977	IPP	-	TRUE	AluJb	SINE,Alu
chr6	149912307	A	G	0.00026		.	FALSE	AluSc	SINE,Alu
chr2	25044957	G	A	0.00651	CENPO,ADCY3	+,-	FALSE
chr1	33086758	T	C	0.00818		.	FALSE	AluY	SINE,Alu
chr2	9629305	A	T	0.00079	ADAM17	-	FALSE
chr3	195962244	G	T	0.00083		.	FALSE
chr1	16912138	A	G	0.00197	NBPF1	-	FALSE
chr1	118066459	A	G	1.18472E-05	MAN1A2	+	FALSE
chr2	37329307	T	C	0.00102		.	FALSE	AluJr4	SINE,Alu
chr12	76423035	A	G	0.00025	PHLDA1	-	FALSE
chr7	6501833	A	T	0.00032	KDELR2	-	FALSE
chr2	183817957	T	A	0.00031	NCKAP1	-	FALSE
chr1	214524044	T	C	0.00242	PTPN14	-	TRUE	AluSx	SINE,Alu
chr1	54871709	T	C	0.00110	SSBP3	-	FALSE
chr1	145369589	T	C	0.00046	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	179045672	G	A	0.00411	FAM20B	+	FALSE
chr1	9416151	G	A	0.00292	SPSB1	+	FALSE
chr1	45973928	G	A	0.00093	MMACHC	+	FALSE
chr1	22400702	T	C	0.00883	CDC42	+	FALSE	AluSc8	SINE,Alu
chr2	20450819	T	C	0.00807	PUM2	-	TRUE
chr1	10521200	T	C	3.54723E-07	DFFA	-	TRUE	AluY	SINE,Alu
chr1	51873951	G	A	0.00588	EPS15	-	FALSE
chr1	46159809	T	A	0.00761	TMEM69	+	FALSE
chr1	6283260	T	C	0.00402	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	232319611	A	T	3.84700E-07	NCL	-	FALSE
chr1	16918717	C	T	0.00550	NBPF1	-	FALSE
chr1	46774783	A	G	1.06423E-10	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr8	124262076	G	T	0.00115	ZHX1-C8orf76,ZHX1	-	FALSE
chr12	133298355	A	G	0.00024	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	6582498	T	C	0.00403	NOL9	-	TRUE	AluSx1	SINE,Alu
chr3	100083427	T	A	0.00456	TOMM70	-	FALSE	FAM	SINE,Alu
chr2	207146629	A	G	0.00434	ZDBF2	+	FALSE
chr1	92946618	A	G	0.00062	GFI1	-	FALSE
chr1	17287301	A	G	0.00104	CROCC	+	FALSE
chr1	153533586	T	C	0.00358	S100A2	-	FALSE	Charlie18a	SINE,Alu
chr17	61897188	G	T	0.00465	FTSJ3	-	FALSE
chr19	42376702	A	G	6.18708E-08		.	FALSE	AluSp	SINE,Alu
chr1	11722350	C	A	0.00355	FBXO44	+	FALSE	OldhAT1	SINE,Alu
chr1	173009536	T	A	0.00519		.	FALSE
chr19	16661541	T	C	0.00120	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr1	112258252	A	G	0.00224	RAP1A	+	FALSE
chr2	64327544	G	T	0.00917	PELI1	-	FALSE
chr1	15993714	T	A	0.00066		.	FALSE
chr1	21544447	G	A	0.00115	ECE1	-	FALSE
chr11	75116737	G	A	0.00774	RPS3	+	FALSE
chr2	38522643	G	T	0.00285	ATL2	-	FALSE
chr1	53289688	A	G	0.00731	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr12	98943182	A	G	1.41026E-08	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	144932197	T	A	0.00430	NBPF20,PDE4DIP	+,-	FALSE
chr1	209602381	G	A	0.00057	MIR205HG	+	FALSE	AluJb	SINE,Alu
chr1	168218735	A	G	0.00924		.	FALSE	AluSz	SINE,Alu
chr4	103809241	A	T	0.00073	CISD2,SLC9B1	+,-	FALSE
chr1	1344998	A	G	0.00461		.	FALSE	AluSg	SINE,Alu
chr2	201842434	T	C	1.94652E-05	FAM126B	-	TRUE	AluJb	SINE,Alu
chr2	73460316	G	T	0.00368	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr17	73939212	T	C	0.00376	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr2	85548639	A	G	0.00687	TGOLN2	-	FALSE
chr1	33277080	C	T	8.00797E-06	YARS	-	FALSE	LTR6A	SINE,Alu
chr19	56090351	C	T	1.52943E-09	ZNF579	-	FALSE
chr1	3729217	T	C	0.00119	CEP104	-	TRUE	AluSx3	SINE,Alu
chr4	1305799	C	T	0.00730	MAEA	+	FALSE
chr3	112720120	T	G	0.00573	GTPBP8	+	FALSE
chr3	44791062	T	C	0.00014	KIAA1143	-	FALSE
chr2	128952006	A	G	0.00076	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	53288862	A	G	0.00155	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	220231963	T	C	0.00343	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	234740975	G	A	0.00106	IRF2BP2	-	FALSE
chr1	145513114	A	G	6.80046E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	10042988	A	G	0.00095	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	128950217	C	T	0.00255	UGGT1	+	FALSE
chr1	89447868	G	T	0.00236	KYAT3,RBMXL1	-	FALSE
chr15	41597669	A	G	0.00087		.	FALSE	AluSz6	SINE,Alu
chr8	17796338	G	T	4.50000E-10	PCM1	+	FALSE
chr18	19445881	T	A	0.00224	MIB1	+	FALSE
chr12	133298917	A	G	0.00612	PGAM5	+	TRUE	AluSg	SINE,Alu
chr2	208620143	A	G	0.00605	CCNYL1	+	TRUE	EutTc1-N1	SINE,Alu
chr1	179811337	C	A	0.00670	TOR1AIP2	-	FALSE	AluSp	SINE,Alu
chr1	145273345	T	C	0.00133	NBPF20,NOTCH2NL	+	FALSE
chr1	92977228	T	C	0.00206	EVI5	-	TRUE	AluJr	SINE,Alu
chr1	16160968	C	T	0.00524	FLJ37453	-	FALSE	(T)n	SINE,Alu
chr1	33086812	T	C	0.00250		.	FALSE	AluY	SINE,Alu
chr2	37327651	T	C	0.00395		.	FALSE
chr1	175128444	C	A	0.00036	KIAA0040	-	FALSE
chr1	44071221	G	A	0.00105	PTPRF	+	FALSE
chr1	36068231	T	C	0.00582	PSMB2	-	TRUE	AluSc	SINE,Alu
chr4	103809328	G	T	0.00284	CISD2,SLC9B1	+,-	FALSE
chr16	75479910	T	C	0.00026	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	28826223	A	G	0.00990	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr5	34906692	T	C	0.00021	RAD1	-	TRUE	AluJo	SINE,Alu
chr6	150045919	T	C	0.00206	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	145283718	G	A	0.00989	NBPF20,NOTCH2NL	+	FALSE
chr1	154554950	G	T	0.00599	ADAR	-	FALSE
chr3	15115270	G	T	0.00177	RBSN	-	FALSE
chr1	36068325	T	C	0.00638	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	152976703	T	A	0.00126	STAM2	-	FALSE
chr10	102315864	T	A	0.00290		.	FALSE
chr1	19447819	T	C	0.00337	UBR4	-	FALSE
chr3	98518157	A	T	8.60022E-05	DCBLD2	-	FALSE
chr1	85785549	T	C	0.00621	DDAH1	-	FALSE
chr1	36067925	T	C	4.53272E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	9740895	A	T	0.00136	PIK3CD,PIK3CD-AS2	+,-	FALSE	MLT1F1	SINE,Alu
chr1	7737792	C	G	8.96820E-06	CAMTA1	+	FALSE
chr17	42877749	T	C	0.00287	GJC1	-	TRUE	AluSg	SINE,Alu
chr2	20424655	G	A	0.00193	SDC1	-	FALSE
chr7	75045694	C	T	1.64957E-05	NSUN5P1	+	FALSE
chr5	157184013	A	G	0.00631	LSM11	+	TRUE	AluY	SINE,Alu
chr8	133837579	G	A	0.00019	PHF20L1	+	FALSE	A-rich	SINE,Alu
chr5	40829980	T	C	0.00752		.	FALSE	AluSp	SINE,Alu
chr1	1252723	T	C	7.44553E-05	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr9	132573290	C	T	0.00881	TOR1B	+	FALSE
chr17	49042206	T	C	0.00030	SPAG9	-	TRUE	AluJb	SINE,Alu
chr4	38946824	C	T	0.00250	FAM114A1	+	FALSE
chr1	1653093	A	G	0.00674	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr2	69688897	T	C	0.00888	AAK1	-	TRUE	AluSq2	SINE,Alu
chr6	38140503	C	T	0.00065	BTBD9	-	FALSE
chr4	2517223	A	G	2.74855E-08	RNF4	+	FALSE
chr2	37330368	T	C	0.00069		.	FALSE	AluSq2	SINE,Alu
chr1	889183	C	T	3.20836E-06	NOC2L	-	FALSE
chr4	169910101	C	T	0.00026	CBR4	-	FALSE
chr1	16890130	A	C	0.00753	NBPF1	-	FALSE
chr2	38971642	G	C	0.00013	SRSF7	-	FALSE
chr8	8750467	A	G	0.00131	MFHAS1	-	FALSE
chr1	87379493	G	A	0.00353	SEP15	-	FALSE
chr1	144053664	A	C	0.00050		.	FALSE
chr11	9466935	T	G	0.00439	IPO7	+	FALSE
chr1	93298756	T	C	0.00264	FAM69A,RPL5	+,-	FALSE	MER5C	SINE,Alu
chr1	207942472	A	G	2.11430E-05	CD46	+	TRUE	AluSg4	SINE,Alu
chr1	33148623	A	G	4.79591E-07	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr6	71298639	A	G	0.00339		.	FALSE	AluSp	SINE,Alu
chr1	109479978	G	T	0.00057	CLCC1	-	FALSE
chr1	18808465	T	A	0.00957	KLHDC7A	+	FALSE
chr21	46935076	T	G	0.00164	SLC19A1	-	FALSE
chr4	153898736	A	G	0.00574	FHDC1	+	FALSE	AluJb	SINE,Alu
chr5	41919747	C	T	0.00814	C5orf51	+	FALSE	L2c	SINE,Alu
chr1	168218522	A	G	9.71811E-05		.	FALSE	AluSz	SINE,Alu
chr2	105881486	A	G	0.00042	TGFBRAP1	-	FALSE
chr4	153701130	C	T	2.11271E-05	ARFIP1	+	FALSE
chr1	9162247	T	C	0.00549		.	FALSE	AluSx	SINE,Alu
chr1	38158211	C	T	0.00113	CDCA8	+	FALSE
chr1	10517314	T	C	0.00617		.	FALSE	AluJr	SINE,Alu
chr17	8378932	A	G	0.00372	MYH10	-	FALSE
chr1	10517486	T	C	0.00626		.	FALSE	AluSx1	SINE,Alu
chr5	157185192	A	G	0.00835	LSM11	+	TRUE	AluSq	SINE,Alu
chr1	93297590	C	A	0.00325		.	FALSE
chr6	42856131	A	G	0.00062	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	53289547	A	G	0.00646	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr2	99812864	A	G	0.00458	MRPL30	+	TRUE	AluJb	SINE,Alu
chr2	24225509	A	G	0.00132		.	FALSE	AluSq2	SINE,Alu
chr20	18468339	T	C	0.00062	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr12	125511942	A	G	0.00596	THRIL	-	FALSE	AluSx1	SINE,Alu
chr6	160101723	T	C	0.00234	SOD2	-	TRUE	AluSz	SINE,Alu

RBP	MATR3
Knock-Method	shRNA
RBP Family	RRM_5
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR492UFS
Platform	HiSeq
Pubmed ID	32252787

MATR3 - Target Gene Network