RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr5	79923912	T	C	0.00037	DHFR	-	TRUE	AluSp	SINE,Alu
chr15	90820083	A	G	4.07036E-06		.	FALSE	AluY	SINE,Alu
chr1	9328106	A	G	0.00394	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	6308456	G	A	0.00169	GPR153	-	FALSE
chr1	6283264	T	C	0.00479	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	52817504	T	C	0.00934	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	24286327	G	A	0.00053	PNRC2	+	FALSE
chr2	55516936	A	T	0.00011	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	16112795	A	G	0.00106	FBLIM1	+	FALSE
chr20	10036845	A	G	0.00110	SNAP25-AS1,ANKEF1	+,-	FALSE
chr12	121769840	T	C	0.00499	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr1	204521724	A	G	0.00851	MDM4	+	TRUE	AluSg	SINE,Alu
chr8	17089564	T	C	0.00165	CNOT7	-	FALSE
chr1	16905837	G	A	0.00029	NBPF1	-	FALSE
chr5	37289051	T	C	0.00014		.	FALSE	AluSp	SINE,Alu
chr14	50361170	C	T	0.00096	ARF6	+	FALSE	(T)n	SINE,Alu
chr1	144931392	G	A	0.00683	NBPF20,PDE4DIP	+,-	FALSE
chr1	19984104	A	C	0.00402	MINOS1-NBL1,NBL1	+	FALSE
chr1	235383188	A	G	0.00531	ARID4B	-	FALSE
chr7	74169234	G	T	8.95897E-05	GTF2I	+	FALSE
chr6	31321883	G	A	0.00000		.	FALSE
chr3	192515510	G	T	0.00559	MB21D2	-	FALSE
chr2	178129412	G	T	0.00071	NFE2L2	-	FALSE	(CGG)n	SINE,Alu
chr1	142449	G	A	0.00073		.	FALSE	MIRb	SINE,Alu
chr2	86249961	T	C	0.00292	LOC90784	-	TRUE	AluJr	SINE,Alu
chr17	49042216	T	C	0.00746	SPAG9	-	TRUE	AluJb	SINE,Alu
chr19	53914819	A	G	5.13713E-06	ZNF765	+	TRUE	AluSp	SINE,Alu
chr5	125961810	A	G	3.92353E-06	PHAX	+	TRUE	FLAM_C	SINE,Alu
chr10	75008847	T	C	0.00349	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr3	33038221	C	T	0.00379	GLB1	-	FALSE
chr12	98943011	A	G	1.18352E-07	TMPO	+	TRUE	AluSz	SINE,Alu
chr3	155660961	A	G	6.62819E-05		.	FALSE	AluSz	SINE,Alu
chr1	229730452	G	A	0.00236	TAF5L	-	FALSE
chr2	37330368	T	C	0.00069		.	FALSE	AluSq2	SINE,Alu
chr1	6582761	T	C	0.00052	NOL9	-	FALSE	AluSg	SINE,Alu
chr1	93828523	T	A	0.00155		.	FALSE
chr3	10168785	T	C	0.00198	BRK1	+	FALSE
chr1	19542310	T	C	0.00581	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr6	24719404	C	A	0.00024		.	FALSE
chr1	3753136	A	T	0.00088	CEP104	-	FALSE
chr3	196078364	G	A	0.00290		.	FALSE	GA-rich	SINE,Alu
chr4	113198883	G	T	0.00905	TIFA	-	FALSE
chr12	98942690	A	G	3.03569E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr2	98272734	A	G	0.00996	ACTR1B	-	FALSE
chr1	15818090	T	C	0.00089	CASP9	-	TRUE	AluJb	SINE,Alu
chr2	38522643	G	T	0.00285	ATL2	-	FALSE
chr1	19586437	A	G	0.00056	MRTO4	+	TRUE	AluSz	SINE,Alu
chrX	2824343	T	C	0.00108	ARSD	-	TRUE	AluJb	SINE,Alu
chr1	33071096	A	G	0.00692	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	1595540	T	C	0.00048	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	53365235	G	C	0.00029	ECHDC2	-	FALSE
chr14	69704553	G	T	7.62587E-05	EXD2	+	FALSE
chr19	44418680	G	C	0.00066	ZNF45	-	FALSE
chr1	10518688	T	C	4.38215E-07		.	FALSE	AluSx1	SINE,Alu
chr6	42857542	T	A	0.00029	RPL7L1	+	FALSE	MIRc	SINE,Alu
chr1	16945027	T	C	0.00819	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr6	118029818	T	G	0.00119	NUS1	+	FALSE
chr2	11728089	C	T	0.00352	GREB1	+	FALSE	AluSz	SINE,Alu
chr7	24731065	C	T	0.00414	MPP6	+	FALSE	(TGTATG)n	SINE,Alu
chr1	10519932	T	C	0.00012		.	FALSE	AluJr	SINE,Alu
chr1	10042937	A	G	2.41028E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	38971642	G	C	0.00013	SRSF7	-	FALSE
chr1	38174583	A	C	0.00644	CDCA8	+	FALSE
chr3	127341226	A	G	0.00049	MCM2	+	FALSE
chrX	135300092	T	C	0.00075	MAP7D3	-	TRUE	AluSz	SINE,Alu
chr3	48784500	T	A	0.00264	PRKAR2A	-	FALSE	(T)n	SINE,Alu
chr3	15114493	T	C	2.42944E-10	RBSN	-	TRUE	AluY	SINE,Alu
chr1	110040310	A	G	2.45230E-05	CYB561D1	+	FALSE
chr1	1662754	T	C	0.00107	SLC35E2	-	TRUE	AluY	SINE,Alu
chr5	40832552	G	T	1.14652E-07	RPL37	-	FALSE
chr3	48556339	G	A	6.87729E-06	PFKFB4	-	FALSE
chr1	148023067	C	T	0.00772	NBPF8	-	FALSE
chr5	114951140	T	G	0.00761	TMED7-TICAM2,LOC101927100,TMED7	+,-	FALSE
chr6	33269307	T	C	0.00645		.	FALSE	AluSx	SINE,Alu
chr1	53291395	A	G	0.00017	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr2	176792535	T	G	0.00211	LNPK	-	FALSE
chr1	179829595	T	C	0.00188	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	27202812	T	C	0.00356		.	FALSE	AluSq2	SINE,Alu
chr6	42855182	A	G	0.00583	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	67874689	T	C	0.00112	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	121134245	C	T	0.00174	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr1	15989141	C	G	0.00364		.	FALSE
chr1	205684067	T	C	0.00499	NUCKS1	-	FALSE
chr2	128620436	C	T	0.00342	AMMECR1L	-	FALSE
chr7	20177519	T	C	0.00885	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr1	145281613	C	A	0.00979	NBPF20,NOTCH2NL	+	FALSE
chr2	37331555	T	C	0.00132		.	FALSE	AluJb	SINE,Alu
chr1	114306374	G	A	0.00124	RSBN1	-	FALSE
chr1	150937959	A	G	3.24660E-05	CERS2	-	FALSE	G-rich	SINE,Alu
chr1	70718271	G	A	0.00273		.	FALSE
chr1	47844403	C	A	0.00511	CMPK1	+	FALSE
chr1	9162394	T	C	0.00072		.	FALSE	AluSx	SINE,Alu
chr1	45975669	A	G	0.00695	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr17	25640011	A	G	0.00228	WSB1	+	TRUE	AluSx	SINE,Alu
chr5	125962176	A	G	0.00020	PHAX	+	TRUE	AluSc	SINE,Alu
chr5	118811533	G	A	0.00781	HSD17B4	+	FALSE
chr1	16892275	C	T	0.00087	NBPF1	-	FALSE
chr4	39551018	T	C	0.00224	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr3	75475670	A	C	0.00506	FAM86DP	-	FALSE
chr3	148748197	T	A	0.00026	HLTF	-	FALSE
chr1	3730400	T	C	0.00894	CEP104	-	TRUE	AluSx3	SINE,Alu
chr2	37329238	T	C	0.00249		.	FALSE	AluJr4	SINE,Alu
chr1	45976722	G	T	0.00292	MMACHC,PRDX1	+,-	FALSE
chr1	143398850	G	T	0.00639		.	FALSE
chr8	8750467	A	G	0.00131	MFHAS1	-	FALSE
chr11	68523337	T	C	0.00016	CPT1A	-	TRUE	AluSq	SINE,Alu
chr3	124732406	C	A	0.00975	HEG1	-	FALSE
chr1	19543353	T	C	0.00101	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	228881190	T	G	0.00043	RHOU	+	FALSE
chr1	222906426	T	C	0.00322	BROX	+	FALSE	AluSx	SINE,Alu
chr4	2940265	T	C	0.00413	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr3	141667690	T	C	0.00018	TFDP2	-	TRUE	AluY	SINE,Alu
chr6	150047430	T	C	0.00568	NUP43	-	TRUE	AluSc	SINE,Alu
chr3	17201882	C	T	0.00282	TBC1D5	-	FALSE
chr2	206987109	T	C	0.00280		.	FALSE	AluSx	SINE,Alu
chr1	16946266	G	C	0.00750	CROCCP2	-	FALSE	MIRb	SINE,Alu
chr1	24933701	A	G	0.00372	NCMAP	+	TRUE	AluJr	SINE,Alu
chr7	128142395	A	C	0.00300	METTL2B	+	FALSE
chr4	77997064	A	G	0.00283	CCNI	-	FALSE	(A)n	SINE,Alu
chr2	120980896	T	G	0.00132	TMEM185B	-	FALSE
chr1	234561498	T	C	0.00092	TARBP1	-	FALSE
chr5	180663940	A	G	0.00331	RACK1	-	FALSE
chr1	16929279	G	A	0.00138	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr6	42855967	A	G	0.00151	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr2	61154325	T	C	0.00706	REL	+	FALSE	L2b	SINE,Alu
chr17	5288078	A	G	0.00081	RABEP1	+	FALSE
chr17	57279171	A	G	0.00063	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	93617404	T	G	0.00265	TMED5	-	FALSE
chr1	32373437	G	A	1.22125E-14	PTP4A2	-	FALSE
chr1	161932324	A	G	0.00056	ATF6	+	FALSE
chr10	65382718	G	A	0.00984	REEP3	+	FALSE	AluSc	SINE,Alu
chr7	17384334	A	G	0.00013	AHR	+	TRUE	AluSx	SINE,Alu
chr1	94342564	C	A	0.00098	DNTTIP2	-	FALSE
chr1	11783776	C	A	0.00039		.	FALSE	AluSq	SINE,Alu
chr12	56510698	C	G	0.00019	RPL41	+	FALSE
chr6	36894337	G	A	0.00607	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr1	1252662	T	C	0.00235	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr12	98942904	A	G	0.00259	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	35817023	G	C	0.00547	ZMYM4	+	FALSE
chr2	206987108	T	C	0.00015		.	FALSE	AluSx	SINE,Alu
chr1	179044181	A	G	0.00660	FAM20B	+	TRUE	AluSx	SINE,Alu
chr6	26095642	A	G	0.00332		.	FALSE	AluY	SINE,Alu
chr1	100488177	C	T	0.00080	SLC35A3	+	FALSE
chr5	149363214	A	G	6.58903E-07	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr2	217366626	A	G	0.00057		.	FALSE	AluSz	SINE,Alu
chr4	95173779	T	C	0.00771	SMARCAD1	+	FALSE
chr1	65696034	G	C	0.00803	AK4	+	FALSE
chr1	6283332	T	C	6.58989E-06	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	150446673	A	G	2.11627E-07	RPRD2	+	FALSE
chr1	16861804	G	A	0.00903	LOC100132147	-	FALSE	tRNA-Glu-GAA	SINE,Alu
chr1	10517276	T	C	0.00252		.	FALSE	AluJr	SINE,Alu
chr1	161931628	G	C	0.00476	ATF6	+	FALSE
chr1	116234083	T	A	0.00477	VANGL1	+	FALSE
chr1	201975173	G	T	0.00053	RNPEP	+	FALSE
chr2	208619377	A	G	0.00769	CCNYL1	+	TRUE	FAM	SINE,Alu
chr1	33071096	A	G	0.00238	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr3	185826740	T	G	0.00041	ETV5	-	FALSE
chr10	13320110	T	C	0.00193	PHYH	-	FALSE
chr1	46126142	G	C	0.00171	GPBP1L1	-	FALSE
chr1	38280618	G	T	0.00020	MTF1	-	FALSE	(T)n	SINE,Alu
chr1	39951484	C	A	0.00592	MACF1	+	FALSE
chr3	189712010	G	A	1.42873E-07	P3H2	-	FALSE
chr1	149577127	G	C	0.00709	LINC00623,LINC00869,LOC103091866	+	FALSE
chr3	15115270	G	T	0.00177	RBSN	-	FALSE
chr1	180855948	G	A	0.00218	XPR1	+	FALSE
chr12	1086062	G	T	0.00847	RAD52	-	FALSE	L2	SINE,Alu
chr1	16269737	C	T	0.00816	ZBTB17	-	FALSE
chr4	57326875	A	G	1.03861E-05	PAICS	+	TRUE	AluSx1	SINE,Alu
chr3	56654248	T	G	3.99921E-06	CCDC66,FAM208A	+,-	FALSE
chr1	158067059	A	C	0.00655	KIRREL	+	FALSE
chr2	70506338	C	T	0.00026	PCYOX1	+	FALSE
chr15	90820068	A	G	0.00194		.	FALSE	AluY	SINE,Alu
chr1	6640640	T	G	0.00982	ZBTB48	+	FALSE
chr1	10520725	T	C	0.00795	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	183596136	A	G	0.00123	ARPC5	-	FALSE
chr12	125267857	T	C	0.00702	SCARB1	-	TRUE	FRAM	SINE,Alu
chr3	10193475	A	G	0.00295	VHL	+	TRUE	AluJr	SINE,Alu
chr1	101443431	C	T	0.00013	SLC30A7	+	FALSE	AluSq2	SINE,Alu
chr10	119038371	C	T	0.00058	SLC18A2	+	FALSE	(ATTTGGCA)n	SINE,Alu
chr1	109818158	C	T	4.51493E-05	CELSR2	+	FALSE
chr7	6501830	G	A	0.00217	KDELR2	-	FALSE
chr1	169101307	C	T	0.00405	ATP1B1	+	FALSE
chr10	120920588	T	C	0.00304	SFXN4	-	FALSE
chr3	120128940	A	G	0.00434	FSTL1	-	FALSE
chr1	10517653	T	C	0.00776		.	FALSE	AluSx1	SINE,Alu
chr1	1597403	C	T	0.00015	CDK11B,SLC35E2B	-	FALSE
chr2	76672504	A	G	2.97414E-06		.	FALSE	7SK	SINE,Alu
chr1	226172221	T	C	0.00030	SDE2	-	FALSE	L1MEf	SINE,Alu
chr1	28218100	T	C	0.00080	RPA2	-	FALSE
chr4	188925184	G	A	0.00032	ZFP42	+	FALSE
chr1	36068210	T	C	0.00025	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	48787674	T	C	0.00240	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr1	87200773	T	C	0.00098	SH3GLB1	+	FALSE
chr5	175934037	C	A	0.00182	FAF2	+	FALSE	A-rich	SINE,Alu
chr2	37075013	T	A	0.00754	STRN	-	FALSE
chr1	179044110	A	G	0.00176	FAM20B	+	TRUE	AluSx	SINE,Alu
chr20	54943385	C	A	0.00844	FAM210B	+	FALSE
chr3	196079280	T	C	0.00614		.	FALSE	AluSx	SINE,Alu
chr4	39551031	T	C	0.00068	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr19	9672979	T	C	0.00028		.	FALSE	AluSx3	SINE,Alu
chr1	76227022	A	G	0.00035	ACADM	+	FALSE
chr4	17803009	T	C	0.00062	DCAF16	-	TRUE	AluSz	SINE,Alu
chr2	62095566	C	T	0.00471	CCT4	-	FALSE
chr14	65400786	T	G	0.00077	CHURC1-FNTB,CHURC1	+	FALSE	AluSx	SINE,Alu
chr21	34728068	A	G	0.00188	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr1	10520487	T	C	0.00638		.	FALSE	AluSx1	SINE,Alu
chr4	103731698	T	C	0.00029	UBE2D3	-	TRUE	AluYk2	SINE,Alu
chr1	44438961	A	G	0.00013	DPH2	+	FALSE	MER3	SINE,Alu
chr6	28873868	T	C	0.00041		.	FALSE	AluJo	SINE,Alu
chr1	3730332	T	C	0.00025	CEP104	-	TRUE	AluSx3	SINE,Alu
chr5	74063154	C	G	0.00255	GFM2,NSA2	+,-	FALSE
chr1	327538	A	G	0.00010		.	FALSE
chr1	38327700	T	C	0.00509	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	28823671	T	C	0.00073	PHACTR4	+	FALSE
chr1	9163400	T	C	0.00726		.	FALSE	AluSp	SINE,Alu
chr3	10192709	C	T	0.00082	VHL	+	FALSE	AluSx1	SINE,Alu
chr3	183547227	T	C	7.80232E-05	PARL	-	FALSE
chr1	16892256	T	C	0.00468	NBPF1	-	FALSE
chr1	148594563	G	T	0.00169	NBPF15	+	FALSE
chr4	39551008	T	C	0.00017	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	28826130	A	G	0.00207	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	70316299	C	A	0.00650	PCBP1	+	FALSE
chr1	114306563	T	A	0.00191	RSBN1	-	FALSE
chr10	89004545	T	C	0.00192	NUTM2A-AS1	-	FALSE	MSTA	SINE,Alu
chr1	110136683	A	C	0.00183	GNAI3	+	FALSE
chr1	1662547	T	C	0.00556	SLC35E2	-	TRUE	AluY	SINE,Alu
chr17	65334867	T	C	1.03096E-06	PSMD12	-	TRUE	AluSq	SINE,Alu
chr6	42856131	A	G	0.00062	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr12	69237020	A	G	0.00150	MDM2	+	TRUE
chr1	46075171	A	C	0.00280	NASP	+	FALSE	A-rich	SINE,Alu
chr6	74303543	T	C	0.00031	SLC17A5	-	TRUE	AluJr	SINE,Alu
chr1	200521297	C	T	0.00133	KIF14	-	FALSE	(T)n	SINE,Alu
chr1	153720690	G	A	0.00786	INTS3	+	FALSE
chr1	16889620	T	C	0.00884	NBPF1	-	FALSE
chr3	10193511	A	G	0.00116	VHL	+	TRUE	AluJr	SINE,Alu
chr8	56985609	G	T	0.00134	RPS20	-	FALSE
chr1	17298140	C	G	0.00584	CROCC	+	FALSE
chr6	31656514	C	T	0.00325		.	FALSE
chr17	74561213	A	G	0.00241	SNHG16	+	FALSE
chr7	128143606	A	G	4.95106E-06		.	FALSE	AluJr4	SINE,Alu
chr1	45975584	T	C	0.00327	MMACHC	+	FALSE	AluSx4	SINE,Alu
chr1	155161704	G	C	0.00034	MUC1	-	FALSE
chr17	7124772	G	A	0.00175	ACADVL	+	FALSE
chr2	85772408	G	A	0.00278	GGCX	-	FALSE
chr1	39990456	G	A	0.00749	BMP8A,PPIEL	+,-	FALSE	L2b	SINE,Alu
chr1	21810903	A	G	0.00498	NBPF3	+	FALSE	L1MC4	SINE,Alu
chr10	51026705	C	G	0.00456	PARG	-	FALSE
chr1	7980667	T	C	0.00584	TNFRSF9	-	TRUE	AluJb	SINE,Alu
chr1	1252687	T	C	0.00459	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	16889423	G	C	6.92544E-07	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr11	68523082	T	C	0.00019	CPT1A	-	TRUE	AluY	SINE,Alu
chr1	1653093	A	G	0.00768	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr8	71550832	T	C	0.00725	LACTB2-AS1,LACTB2	+,-	FALSE
chr2	130795675	C	T	0.00578	FAR2P1	-	FALSE
chr1	28662186	A	G	0.00403	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	36067749	T	C	0.00748	PSMB2	-	TRUE	AluSz	SINE,Alu
chr6	158093827	C	T	0.00201	ZDHHC14	+	FALSE
chr1	214531239	C	T	6.46771E-05	PTPN14	-	FALSE
chr1	116943511	T	C	0.00236	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr2	210885022	C	T	0.00325	RPE	+	FALSE
chr1	160967854	T	C	0.00150	F11R	-	TRUE	AluSp	SINE,Alu
chr6	42856029	A	G	0.00099	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr3	11596302	T	C	0.00110	ATG7	+	FALSE
chr1	16133987	T	C	0.00830	UQCRHL	-	FALSE
chr19	42376710	A	G	1.82395E-05		.	FALSE	AluSp	SINE,Alu
chr1	40229368	A	G	0.00154	BMP8B,PPIE	+,-	FALSE
chr10	47098568	C	T	0.00178	LINC00842	-	FALSE
chr5	75003678	T	C	0.00435	POC5	-	FALSE
chr5	130540368	A	C	0.00420	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr1	226573364	A	G	0.00128	PARP1	-	FALSE
chr1	33149496	A	G	0.00504	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	42266346	A	G	0.00824	TRAK1	+	FALSE
chr9	7798518	G	C	0.00423	TMEM261	-	FALSE
chr3	14986138	T	C	1.80576E-11	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	10520174	T	C	0.00413		.	FALSE	AluSx	SINE,Alu
chr5	139931634	T	G	6.28154E-05	SRA1	-	FALSE
chr1	225706943	C	T	0.00229	ENAH	-	FALSE
chr2	164466038	C	A	0.00021	FIGN	-	FALSE
chr1	214529740	T	C	0.00356	PTPN14	-	TRUE
chr3	195678003	C	G	0.00146		.	FALSE	L4_A_Mam	SINE,Alu
chr3	186502665	C	T	0.00637	EIF4A2	+	FALSE
chr1	158067061	G	T	0.00093	KIRREL	+	FALSE
chr2	128950515	A	G	0.00052	UGGT1	+	TRUE	AluSc	SINE,Alu
chr21	33974094	C	T	0.00880	C21orf59	-	FALSE
chr1	1650797	A	G	3.70820E-05	CDK11B,CDK11A	-	FALSE
chr5	43380822	T	C	0.00462	CCL28	-	TRUE	AluJb	SINE,Alu
chr1	36067821	T	C	1.12344E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	179044169	A	G	0.00039	FAM20B	+	TRUE	AluSx	SINE,Alu
chr3	179042832	A	G	0.00308	ZNF639	+	TRUE	AluSp	SINE,Alu
chr1	53292875	G	T	8.43181E-07	ZYG11B	+	FALSE
chr2	37328013	T	C	0.00401		.	FALSE
chr5	40832553	A	T	0.00121	RPL37	-	FALSE
chr5	130537933	A	G	0.00084	LYRM7	+	TRUE	AluSp	SINE,Alu
chr1	6283305	T	C	0.00129	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	44459935	T	C	0.00953	CCDC24	+	FALSE	AluJb	SINE,Alu
chr6	2833055	G	A	0.00015	SERPINB1	-	FALSE	AluSx	SINE,Alu
chr6	33172015	T	C	5.04816E-05		.	FALSE
chr1	94995491	C	T	0.00036	F3	-	FALSE	AluSx	SINE,Alu
chr6	79647408	T	G	0.00561	PHIP	-	FALSE
chr1	78414308	T	C	0.00024	FUBP1	-	FALSE
chr2	28002603	C	A	0.00010	MRPL33	+	FALSE
chr6	52442880	G	T	5.05556E-08	TRAM2-AS1	+	FALSE
chr1	100489571	G	A	1.40531E-05	SLC35A3	+	FALSE	AluSc	SINE,Alu
chr19	58371837	A	G	0.00329	ZNF587	+	TRUE	AluSz	SINE,Alu
chr1	93826611	C	G	0.00072	DR1	+	FALSE
chr1	31905887	A	C	0.00221	SERINC2	+	FALSE
chr1	11979815	A	C	0.00274	KIAA2013	-	FALSE
chr2	37076594	T	C	0.00198	STRN	-	FALSE
chr2	85772407	T	A	0.00232	GGCX	-	FALSE
chr4	119555188	C	A	0.00205	LOC729218	+	FALSE
chr3	124948049	T	C	0.00709	ZNF148	-	TRUE
chr1	100659985	T	C	0.00600	DBT	-	FALSE	AluSx3	SINE,Alu
chr1	10519112	T	C	0.00333		.	FALSE	AluSx3	SINE,Alu
chr1	205739266	C	T	0.00125	RAB29	-	FALSE
chr1	207942509	A	G	0.00177	CD46	+	TRUE	AluSg4	SINE,Alu
chr5	34189578	T	C	0.00378		.	FALSE
chr19	3540006	T	C	3.25622E-05	C19orf71	+	FALSE	AluJo	SINE,Alu
chr1	204095687	C	A	5.97770E-05	SOX13	+	FALSE
chr2	224844864	A	G	7.12020E-05	SERPINE2	-	FALSE	L2b	SINE,Alu
chr5	203683	G	T	0.00399		.	FALSE	MIRb	SINE,Alu
chr1	26449340	G	A	0.00711	PDIK1L	+	FALSE
chr1	78342729	A	G	0.00175	MIGA1	+	TRUE	FRAM	SINE,Alu
chr1	154989595	T	C	0.00264	ZBTB7B	+	FALSE
chr7	43665371	A	T	0.00430	STK17A,COA1	+,-	FALSE	(AG)n	SINE,Alu
chr2	161130521	G	A	0.00454	RBMS1	-	FALSE
chr16	81744038	T	C	6.34278E-05	CMIP	+	FALSE	(CCGC)n	SINE,Alu
chr1	16889041	C	T	0.00429	NBPF1	-	FALSE
chr1	109475572	A	G	0.00096	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	16932181	C	T	0.00641	NBPF1	-	FALSE
chr2	55516891	G	A	2.12747E-05	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	10517300	T	C	0.00113		.	FALSE	AluJr	SINE,Alu
chr1	205320469	G	A	0.00109	KLHDC8A	-	FALSE
chr1	10520117	T	C	0.00999		.	FALSE	AluSx	SINE,Alu
chr4	57326875	A	G	0.00797	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	10519912	T	C	0.00737		.	FALSE	AluJr	SINE,Alu
chr12	120899702	T	A	0.00967	GATC,SRSF9	+,-	FALSE
chr11	110128567	A	T	0.00634	RDX	-	FALSE
chr1	179312752	C	T	0.00106	SOAT1	+	FALSE
chr7	65992794	T	C	0.00820		.	FALSE	AluJr	SINE,Alu
chr1	28826150	A	G	0.00052	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	15114306	T	C	0.00036	RBSN	-	TRUE	AluY	SINE,Alu
chr3	122447574	A	C	0.00224	PARP14	+	FALSE
chr14	74526945	T	C	2.53258E-07	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr6	42856156	A	G	0.00105	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr3	10004768	G	A	3.85967E-05	EMC3	-	FALSE	Tigger14a	SINE,Alu
chr7	6501833	A	T	0.00937	KDELR2	-	FALSE
chr1	120165038	A	G	0.00926	ZNF697	-	FALSE
chr20	35521049	G	A	0.00711	TLDC2,SAMHD1	+,-	FALSE
chr4	25236017	T	C	2.76644E-09	PI4K2B	+	FALSE
chr2	224622277	T	C	0.00138	AP1S3	-	TRUE	AluSx1	SINE,Alu
chr2	237035915	C	G	0.00348	AGAP1	+	FALSE
chr4	89625427	G	C	0.00025	HERC3	+	FALSE
chr12	120898728	A	G	0.00947	GATC	+	TRUE	AluY	SINE,Alu
chr1	10520099	T	C	0.00152		.	FALSE	AluSx	SINE,Alu
chr2	216903620	T	C	0.00623	PECR	-	TRUE	AluSx3	SINE,Alu
chr1	155851645	A	G	4.46102E-05	SYT11	+	TRUE	AluSq2	SINE,Alu
chr17	57279281	A	G	0.00055	PRR11	+	TRUE	AluSq2	SINE,Alu
chr2	85133793	G	A	0.00577	TMSB10	+	FALSE
chr1	160112340	A	G	0.00374	ATP1A2	+	TRUE	AluSx3	SINE,Alu
chr3	39137789	G	A	0.00579	WDR48	+	FALSE
chr2	206983797	T	C	0.00145		.	FALSE	AluSx	SINE,Alu
chr1	9161203	T	C	3.69156E-05		.	FALSE	AluSx	SINE,Alu
chr1	75190452	C	T	4.33030E-05	CRYZ	-	FALSE
chr4	177252326	A	G	2.59441E-08	SPCS3	+	TRUE
chr1	1419743	A	G	0.00848	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	144014068	T	C	0.00029		.	FALSE
chr2	99813007	A	G	0.00027	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	932005	A	G	0.00110		.	FALSE
chr1	2303094	T	C	0.00113	MORN1	-	TRUE	AluSp	SINE,Alu
chr1	19934879	T	C	0.00454	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr2	61416411	T	G	0.00146	USP34	-	FALSE	AluSc8	SINE,Alu
chr1	16954981	C	A	0.00876	CROCCP2	-	FALSE
chr2	37328082	T	C	0.00243		.	FALSE
chr10	61548852	G	A	0.00693	CCDC6	-	FALSE
chr5	79923360	T	C	0.00727	DHFR	-	TRUE	AluJr	SINE,Alu
chr2	38522138	G	T	8.89010E-06	ATL2	-	FALSE
chr1	36806071	G	A	0.00126	STK40	-	FALSE
chr1	179041693	T	C	0.00845	FAM20B	+	FALSE
chr1	19545147	T	G	0.00510	LOC101927895,EMC1	+,-	FALSE
chr5	79923788	T	C	0.00693	DHFR	-	TRUE	AluSp	SINE,Alu
chr2	233446266	C	T	0.00177	EIF4E2	+	FALSE
chr1	183105705	G	A	0.00074	LAMC1	+	FALSE
chr1	6282400	T	C	0.00132	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	67874697	T	C	0.00163	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	193054575	C	G	0.00029	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr17	79838088	T	C	6.81311E-05		.	FALSE	AluSx	SINE,Alu
chr2	38522138	G	T	0.00769	ATL2	-	FALSE
chr1	89447868	G	T	0.00236	KYAT3,RBMXL1	-	FALSE
chr2	37328100	T	C	0.00027		.	FALSE
chr1	145512073	A	G	0.00066	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	16933583	T	C	0.00050	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr3	33187831	C	T	6.36740E-05	CRTAP	+	FALSE
chr9	36216895	T	C	0.00130	GNE	-	TRUE	AluY	SINE,Alu
chr3	14986137	T	C	0.00132	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr12	69237534	A	G	0.00106	MDM2	+	TRUE
chr1	94995653	A	C	0.00035	F3	-	FALSE	AluSx	SINE,Alu
chr1	6683581	A	C	0.00189	PHF13	+	FALSE
chr1	9162223	T	C	0.00586		.	FALSE	AluSx	SINE,Alu
chr13	28240417	C	G	6.17934E-05	POLR1D	+	FALSE
chr3	69154343	C	G	0.00408	ARL6IP5	+	FALSE
chr1	6283260	T	C	0.00402	ICMT	-	TRUE	AluSx3	SINE,Alu
chr5	174956497	C	T	0.00487	SFXN1	+	FALSE
chr1	16912029	C	G	0.00831	NBPF1	-	FALSE
chr6	42856105	A	G	0.00972	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr15	65442483	T	C	0.00523	CLPX	-	TRUE	AluSg4	SINE,Alu
chr3	39137793	C	T	0.00363	WDR48	+	FALSE
chr2	198416735	T	G	0.00257	HSPE1-MOB4,MOB4	+	FALSE
chr1	53291395	A	G	0.00323	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr7	44918728	T	C	0.00192	PURB	-	TRUE	AluSg	SINE,Alu
chr3	10192826	A	G	0.00037	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	62627128	A	G	2.94675E-05	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	148004548	T	C	0.00110	NBPF8	-	FALSE
chr1	10517300	T	C	0.00011		.	FALSE	AluJr	SINE,Alu
chr1	10519912	T	C	0.00613		.	FALSE	AluJr	SINE,Alu
chr3	183476685	G	A	0.00032	YEATS2	+	FALSE
chr1	1245164	C	T	0.00318	PUSL1	+	FALSE
chr20	29631557	A	G	0.00159	FRG1BP	+	FALSE
chr2	37328097	T	C	0.00301		.	FALSE
chr1	150619971	G	A	0.00126	GOLPH3L	-	FALSE	AluJo	SINE,Alu
chr17	65335356	T	C	5.15611E-11	PSMD12	-	TRUE	AluSx	SINE,Alu
chr5	149363273	A	G	0.00114	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr3	196659892	T	G	0.00620	SENP5	+	FALSE	AluSz	SINE,Alu
chr4	6925237	C	G	0.00870	TBC1D14	+	FALSE
chr19	3121451	C	T	0.00567	GNA11	+	FALSE
chr11	6703162	A	T	0.00726	MRPL17	-	FALSE
chr2	227597207	T	C	0.00209	IRS1	-	FALSE	(TA)n	SINE,Alu
chr8	12286546	A	G	0.00400	FAM86B2	-	FALSE
chr1	22200473	C	T	0.00039	HSPG2	-	FALSE
chr12	6601329	C	T	3.97278E-05	MRPL51	-	FALSE
chr1	109535128	G	A	0.00063	WDR47	-	FALSE
chr1	68167217	G	T	0.00036	GNG12	-	FALSE
chr20	35409827	T	C	0.00267	SOGA1	-	TRUE	AluSx	SINE,Alu
chr1	200558363	T	C	1.35174E-05	KIF14	-	FALSE
chr1	38278949	C	A	0.00664	MTF1	-	FALSE	AluSp	SINE,Alu
chr1	45975673	A	G	0.00242	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr7	20178567	T	C	1.15326E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	212277584	G	C	0.00997	DTL	+	FALSE
chr2	113513825	T	C	2.13681E-05	CKAP2L	-	FALSE
chr1	120839681	C	A	0.00077	FAM72B	+	FALSE
chr2	99812978	A	G	0.00475	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	161559407	A	G	0.00237	FCGR2C	+	FALSE
chr1	36770605	C	T	0.00041	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	16889985	T	C	0.00778	NBPF1	-	FALSE
chr4	2940347	T	C	1.36349E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	22854928	A	G	0.00258	ZBTB40	+	FALSE	A-rich	SINE,Alu
chr17	65334766	T	C	4.45484E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr6	31236900	G	A	0.00167		.	FALSE
chr1	109856085	G	A	0.00684	SORT1	-	FALSE
chr3	63997896	G	A	0.00301	PSMD6-AS2,PSMD6	+,-	FALSE
chr3	39453610	C	T	0.00025	RPSA	+	FALSE
chr1	36067925	T	C	4.53272E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	77759578	A	G	0.00404	AK5	+	FALSE
chr1	231557138	C	G	0.00394	EGLN1	-	FALSE
chr14	53243438	T	C	7.89901E-12	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr4	77996969	T	G	0.00971	CCNI	-	FALSE
chr2	201774209	T	C	0.00534		.	FALSE	AluSz	SINE,Alu
chr1	10518720	T	C	0.00530		.	FALSE	AluSx1	SINE,Alu
chr1	220231330	T	C	0.00427	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	16889414	T	C	0.00012	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	65147002	C	T	6.62669E-07	CACHD1	+	FALSE
chr10	121437033	T	G	0.00357	BAG3	+	FALSE
chr2	208620129	A	G	0.00061	CCNYL1	+	TRUE	EutTc1-N1	SINE,Alu
chr10	71909957	G	T	0.00853		.	FALSE
chr3	20025677	G	T	0.00116	RAB5A,PP2D1	+,-	FALSE
chr2	85547772	G	C	0.00871	TGOLN2	-	FALSE
chr3	141012493	C	A	0.00249	PXYLP1	+	FALSE	MER58A	SINE,Alu
chr1	246829616	T	C	0.00139	CNST	+	FALSE
chr7	66007124	T	C	0.00158	GS1-124K5.11	-	TRUE	AluJo	SINE,Alu
chr4	6644459	C	A	0.00109	MRFAP1	+	FALSE
chr2	164466037	A	T	0.00090	FIGN	-	FALSE
chr1	40219065	C	T	0.00232	PPIE	+	FALSE
chr15	41591417	A	G	2.88542E-07	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	205056301	A	G	0.00506	RBBP5	-	FALSE
chr1	1169728	G	T	0.00745	B3GALT6	+	FALSE
chr1	6583066	T	C	0.00088	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	6283551	T	C	0.00324	ICMT	-	FALSE
chr1	204521580	A	G	0.00169	MDM4	+	TRUE	AluSg	SINE,Alu
chr5	121400545	A	T	0.00740	LOX	-	FALSE
chr7	17384440	A	G	0.00271	AHR	+	TRUE	AluSx	SINE,Alu
chr1	121133770	A	G	0.00295	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr2	206862015	G	A	0.00026	INO80D	-	FALSE
chr4	17804279	G	A	0.00606	DCAF16	-	FALSE	(A)n	SINE,Alu
chr3	184766301	T	C	0.00025	VPS8	+	FALSE
chr1	38423199	A	T	0.00192	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	16929100	C	T	0.00348	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr1	94351063	A	T	0.00907	GCLM	-	FALSE
chr3	42266349	C	T	0.00942	TRAK1	+	FALSE
chr6	42981526	C	G	0.00129	MEA1	-	FALSE
chr1	47840953	A	G	0.00404	CMPK1	+	FALSE
chr16	15198598	C	T	0.00494	PDXDC1,PKD1P6-NPIPP1,LOC100505915	+,-	FALSE
chr15	42861705	A	G	0.00518	HAUS2	+	TRUE	AluJb	SINE,Alu
chr1	33148691	A	G	0.00547	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	17395521	G	A	0.00788	PADI2	-	FALSE
chr8	92075904	T	C	0.00242	OTUD6B-AS1	-	FALSE	LTR67B	SINE,Alu
chr15	64455123	G	T	1.10189E-06	PPIB	-	FALSE
chr5	125961534	A	G	0.00233	PHAX	+	TRUE	AluSz6	SINE,Alu
chr2	114718893	C	G	0.00631	ACTR3	+	FALSE
chr2	171699153	C	G	0.00247	GAD1	+	FALSE
chr1	9331101	A	G	0.00026	H6PD	+	FALSE	AluSx	SINE,Alu

RBP	CIRBP
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR230ORC
Platform	HiSeq
Pubmed ID	32252787

CIRBP - Target Gene Network