RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr5	70952934	C	T	0.00315	MCCC2	+	FALSE	MIR	SINE,Alu
chr9	19373160	A	G	0.00404	DENND4C	+	FALSE	MADE1	SINE,Alu
chr1	236702210	A	G	0.00153	LGALS8	+	FALSE
chr7	143003526	A	T	0.00050	CASP2	+	FALSE	AluY	SINE,Alu
chr16	56510334	T	C	0.00494	OGFOD1	+	FALSE
chr1	9163328	T	C	0.00150		.	FALSE	AluSp	SINE,Alu
chr3	196659892	T	G	0.00620	SENP5	+	FALSE	AluSz	SINE,Alu
chr1	143189076	G	A	0.00048	LOC102723769	-	FALSE
chr3	99517483	C	T	0.00070	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr1	19984346	A	G	0.00071	MINOS1-NBL1,NBL1	+	FALSE
chr5	37290336	T	C	0.00036		.	FALSE	AluSz	SINE,Alu
chr12	133298121	A	G	0.00026	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	134370	T	C	0.00327		.	FALSE	AluSg	SINE,Alu
chr19	9672919	T	C	0.00097		.	FALSE	AluSx3	SINE,Alu
chr4	17845943	C	G	0.00000	NCAPG,LCORL	+,-	FALSE
chr2	72403405	A	C	0.00227	EXOC6B	-	FALSE	GA-rich	SINE,Alu
chr2	85772408	G	A	0.00278	GGCX	-	FALSE
chr1	120695197	G	A	2.17750E-05		.	FALSE
chr6	109785909	T	C	0.00556	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr1	1234095	C	A	0.00039	ACAP3	-	FALSE
chr1	19953124	G	A	0.00106	MINOS1,MINOS1-NBL1	+	FALSE
chr1	100489835	A	G	0.00043	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr3	113604709	T	C	0.00012	GRAMD1C	+	FALSE
chr2	37331560	T	C	0.00040		.	FALSE	AluJb	SINE,Alu
chr14	50792966	A	T	0.00852		.	FALSE	AluSx	SINE,Alu
chr6	44417142	A	G	0.00144	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	204526648	A	G	0.00302	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	32661615	A	T	0.00033	TXLNA	+	FALSE
chr4	165998958	T	C	0.00021	TMEM192	-	TRUE	Alu	SINE,Alu
chr1	179042580	A	G	0.00995	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	9160982	T	C	0.00350		.	FALSE	AluJb	SINE,Alu
chr1	1593060	T	C	5.25946E-05	CDK11B,SLC35E2B	-	FALSE
chr2	30748507	C	T	0.00103	LCLAT1	+	FALSE
chr1	43272842	A	T	5.86577E-06	SVBP	-	FALSE
chr2	128064446	G	T	0.00066	MAP3K2	-	FALSE	(GT)n	SINE,Alu
chr1	19665566	A	C	0.00028	CAPZB	-	FALSE
chr1	89518173	T	A	0.00465	GBP1	-	FALSE
chr6	71298816	A	T	0.00287		.	FALSE
chr2	207943813	G	T	0.00619	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr1	27426756	A	G	0.00384	SLC9A1	-	FALSE
chr1	32373563	G	A	0.00089	PTP4A2	-	FALSE
chr12	125514122	A	G	1.22592E-05		.	FALSE	(TA)n	SINE,Alu
chr3	195963395	A	G	0.00028		.	FALSE
chr16	1411036	A	G	0.00766	GNPTG	+	TRUE	AluSz	SINE,Alu
chr1	75171751	T	C	0.00100	CRYZ	-	FALSE
chr9	19373161	A	G	0.00647	DENND4C	+	TRUE	MADE1	SINE,Alu
chr1	41972561	T	C	0.00606	HIVEP3	-	FALSE	(T)n	SINE,Alu
chr2	208619377	A	G	0.00769	CCNYL1	+	TRUE	FAM	SINE,Alu
chr1	10521254	T	C	0.00041	DFFA	-	TRUE	AluY	SINE,Alu
chr1	227845283	C	A	0.00809	ZNF678	+	FALSE
chr7	20178434	T	C	0.00178	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr2	176790393	C	T	0.00282	LNPK	-	FALSE	AluSp	SINE,Alu
chr1	85742157	G	C	0.00514	BCL10,LOC646626	+,-	FALSE
chr1	67874697	T	C	0.00010	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	36386884	C	T	0.00375	AGO1	+	FALSE
chr1	10520819	T	C	0.00034	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	27992824	G	A	0.00025	IFI6	-	FALSE
chr20	42933642	T	C	0.00275	FITM2	-	TRUE	AluJo	SINE,Alu
chr22	33257373	G	A	0.00581	SYN3,TIMP3	+,-	FALSE
chr12	123640853	C	G	0.00667		.	FALSE
chr1	100316589	A	G	0.00147	AGL	+	FALSE
chr4	57326236	A	G	0.00699	PAICS	+	TRUE	AluJr	SINE,Alu
chr7	6048973	C	A	8.39369E-05	AIMP2	+	FALSE
chr1	120694990	C	A	0.00325		.	FALSE	A-rich	SINE,Alu
chr4	84525986	G	T	0.00081	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr1	67874697	T	C	0.00190	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr5	145838680	A	G	0.00395	TCERG1	+	FALSE	(GCCCAG)n	SINE,Alu
chr1	182993025	C	T	0.00490	LAMC1	+	FALSE
chr1	16892256	T	C	0.00468	NBPF1	-	FALSE
chr1	87379493	G	A	0.00353	SEP15	-	FALSE
chr1	16929100	C	T	0.00348	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr4	17488244	G	A	0.00030	QDPR	-	FALSE
chr2	3622912	G	T	0.00000	RPS7	+	FALSE
chr6	32147696	G	A	6.22517E-06		.	FALSE
chr4	41956413	C	T	0.00543	TMEM33	+	FALSE
chr7	100958270	T	C	0.00087	LOC101927746,IFT22	+,-	FALSE
chr2	10198113	C	A	0.00893	CYS1	-	FALSE
chr17	43002237	C	A	0.00141	KIF18B	-	FALSE
chr1	15909744	C	T	0.00100	AGMAT	-	FALSE
chr3	184766301	T	C	0.00648	VPS8	+	FALSE
chr3	39438321	A	T	6.25124E-06	SLC25A38	+	FALSE
chr1	145509569	A	G	0.00405	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	45244414	T	A	0.00456		.	FALSE
chr1	100548780	A	T	0.00791	MFSD14A	+	FALSE
chr3	193854148	T	A	0.00106	HES1	+	FALSE
chr11	19184951	G	A	0.00066	ZDHHC13	+	FALSE
chr5	81571877	C	T	0.00250	RPS23	-	FALSE
chr1	11783889	A	G	0.00746		.	FALSE	AluSq	SINE,Alu
chr1	1447756	G	C	0.00354	ATAD3A	+	FALSE
chr12	125511960	A	G	6.81205E-06	THRIL	-	FALSE	AluSx1	SINE,Alu
chr3	40503562	G	A	0.00017	RPL14	+	FALSE
chr12	44182706	A	G	0.00788	IRAK4	+	FALSE	MSTB-int	SINE,Alu
chr1	10517623	T	C	0.00348		.	FALSE	AluSx1	SINE,Alu
chr1	20978024	C	A	0.00175	PINK1-AS	-	FALSE
chr5	125961611	A	G	0.00113	PHAX	+	TRUE	AluSz6	SINE,Alu
chr3	39138082	C	T	8.26379E-05	WDR48	+	FALSE
chr1	28835937	A	G	0.00061	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	36068325	T	C	0.00065	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	154554951	A	G	0.00554	ADAR	-	FALSE
chr4	153898316	A	G	0.00312	FHDC1	+	TRUE	AluJo	SINE,Alu
chr1	1650807	T	C	0.00096	CDK11B,CDK11A	-	FALSE
chr1	148556087	G	C	0.00106		.	FALSE
chr19	19793876	A	G	0.00080	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr1	16933638	G	A	4.07227E-05	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr4	128958127	A	G	0.00556	ABHD18	+	TRUE	AluSx3	SINE,Alu
chr1	1361641	C	T	0.00928	TMEM88B	+	FALSE
chr19	3465142	T	C	0.00100	NFIC	+	FALSE
chr2	217366674	A	G	0.00219		.	FALSE	AluSz	SINE,Alu
chr5	174956218	A	G	0.00953	SFXN1	+	TRUE	AluSp	SINE,Alu
chr1	109816293	G	C	0.00759	CELSR2	+	FALSE
chr2	112252626	A	C	0.00048	MIR4435-2HG	-	FALSE
chr8	42876058	A	G	0.00029	HOOK3	+	TRUE	AluSq2	SINE,Alu
chr1	114940211	G	T	8.00129E-05	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	16909129	T	C	0.00131	NBPF1	-	FALSE
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr21	40195059	A	G	0.00817	ETS2	+	FALSE
chr1	179876988	C	G	0.00045	TOR1AIP1	+	FALSE
chr1	36067749	T	C	0.00735	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	128601426	T	C	0.00034		.	FALSE	AluJr	SINE,Alu
chr1	55060362	G	A	0.00246	ACOT11	+	FALSE
chr1	26796922	G	C	0.00401	DHDDS	+	FALSE	FLAM_C	SINE,Alu
chr5	132440285	C	G	0.00322	HSPA4	+	FALSE
chr1	145284136	G	A	0.00072	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr2	11323106	G	T	0.00860	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr3	44692564	C	G	0.00182	ZNF35	+	FALSE
chr3	127790249	A	G	0.00057	RUVBL1,SEC61A1	+,-	FALSE
chr1	161930908	G	A	0.00664	ATF6	+	FALSE
chr1	27992825	G	A	0.00012	IFI6	-	FALSE
chr2	37327590	T	C	0.00364		.	FALSE
chr9	127711532	T	C	0.00018	SCAI	-	TRUE	AluSp	SINE,Alu
chr3	160219095	G	A	0.00620	KPNA4	-	FALSE	A-rich	SINE,Alu
chr2	158636910	G	A	0.00160	ACVR1	-	FALSE
chr2	217366191	T	A	0.00306		.	FALSE
chr1	6582161	T	C	0.00697	NOL9	-	TRUE	AluSq4	SINE,Alu
chr1	118066459	A	G	0.00729	MAN1A2	+	FALSE
chr1	40537924	G	A	0.00404	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	23381596	T	C	0.00762	KDM1A	+	FALSE
chr1	9161199	T	C	0.00468		.	FALSE	AluSx	SINE,Alu
chr1	168218660	A	G	0.00296		.	FALSE	AluSz	SINE,Alu
chr1	144931727	G	A	0.00037	NBPF20,PDE4DIP	+,-	FALSE
chr5	179720333	A	G	0.00308		.	FALSE
chr1	24861704	G	A	0.00345	RCAN3	+	FALSE
chr2	172412829	T	A	0.00477	CYBRD1	+	FALSE
chr6	11185161	C	T	0.00297	NEDD9	-	FALSE
chr1	75175886	T	C	0.00880	CRYZ	-	FALSE
chr1	53289852	A	G	0.00894	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr2	201253956	A	G	1.78964E-05	SPATS2L	+	FALSE
chr2	101622889	T	A	0.00022	RPL31	+	FALSE
chr3	75779573	A	G	0.00530	ZNF717	-	FALSE
chr1	46269493	G	C	0.00233	MAST2	+	FALSE
chr1	33148251	A	G	0.00389	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr12	990912	A	C	0.00244	WNK1	+	FALSE
chr3	196670082	A	T	0.00261	NCBP2-AS2	+	FALSE
chr1	6704635	A	G	0.00978	DNAJC11	-	FALSE
chr1	182569318	G	T	0.00101	RGS16	-	FALSE
chr1	23409538	G	A	0.00464	KDM1A	+	FALSE
chr13	38936619	G	T	0.00212	UFM1	+	FALSE
chr1	46828653	T	A	0.00920	NSUN4	+	FALSE
chr4	40631476	C	A	5.49937E-05	RBM47	-	FALSE
chr17	18111804	T	G	0.00487	ALKBH5	+	FALSE	(TTTTGTT)n	SINE,Alu
chr1	16918502	A	G	0.00437	NBPF1	-	FALSE
chr2	86272758	G	A	0.00023	POLR1A	-	FALSE
chr3	39137794	T	C	0.00240	WDR48	+	FALSE
chr1	118503786	A	G	0.00135	SPAG17	-	FALSE	AluSx3	SINE,Alu
chr1	67874859	T	C	0.00209	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	94335333	G	T	0.00510	DNTTIP2	-	FALSE
chr21	34730108	A	G	0.00680	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr22	50745987	C	G	0.00683	PLXNB2	-	FALSE
chr1	16929327	C	T	0.00304	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	28564195	T	C	0.00113	ATPIF1	+	FALSE
chr4	25236017	T	C	2.76644E-09	PI4K2B	+	FALSE
chr1	1152631	C	A	0.00517	SDF4	-	FALSE
chr2	202030111	A	G	0.00983	CFLAR	+	TRUE	AluSx1	SINE,Alu
chr1	22200473	C	T	0.00039	HSPG2	-	FALSE
chr1	205737659	C	T	0.00024	RAB29	-	FALSE	AluSq2	SINE,Alu
chr7	21941589	T	A	0.00535	CDCA7L	-	FALSE
chr1	62579758	G	A	0.00250	PATJ	+	FALSE
chr1	226333558	A	C	0.00722	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr14	31916784	T	C	2.67040E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	168213597	A	G	0.00481		.	FALSE	AluSx1	SINE,Alu
chr12	123346999	T	A	0.00838	HIP1R	+	FALSE
chr8	33356827	T	A	0.00122	MAK16,TTI2	+,-	FALSE
chr20	25428547	A	G	7.92315E-05	GINS1	+	TRUE	AluJb	SINE,Alu
chr3	53259329	G	C	0.00036	TKT	-	FALSE
chr3	44790879	T	C	0.00453	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	142804438	G	T	0.00618		.	FALSE
chr1	8412652	A	C	0.00929	RERE	-	FALSE
chr1	220310158	A	C	0.00159	IARS2	+	FALSE
chr1	24296869	G	T	0.00973		.	FALSE	AluSg	SINE,Alu
chr2	85547772	G	C	0.00871	TGOLN2	-	FALSE
chr5	14769103	G	A	0.00104	ANKH	-	FALSE
chr1	197053373	G	A	0.00124	ASPM	-	FALSE
chr15	82336939	G	A	2.47536E-05	MEX3B	-	FALSE
chr1	156044213	G	T	7.72130E-05	MEX3A	-	FALSE	(T)n	SINE,Alu
chr2	202029999	T	G	0.00350	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chr3	196729939	C	T	0.00862	MELTF,MFI2-AS1	+,-	FALSE	G-rich	SINE,Alu
chr1	33148716	T	C	0.00835	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	89271574	T	C	3.83690E-05	PKN2	+	FALSE
chr8	144940368	C	T	0.00020	EPPK1	-	FALSE
chr1	68168152	C	T	0.00258	GNG12	-	FALSE
chr1	145284132	G	A	0.00338	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr3	195411991	C	A	0.00058	SDHAP2	+	FALSE
chr3	183529603	G	A	0.00219	YEATS2	+	FALSE
chr3	10285030	G	A	0.00384	IRAK2	+	FALSE
chr1	20826781	C	T	0.00296	MUL1	-	FALSE
chr3	124950421	T	A	0.00713	ZNF148	-	FALSE
chr12	62928633	G	A	0.00307	MON2	+	FALSE
chr4	57326875	A	G	0.00797	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	45244411	C	A	0.00149	RPS8	+	FALSE
chr1	27992800	C	A	0.00011	IFI6	-	FALSE	FAM	SINE,Alu
chr11	68523016	T	C	0.00016	CPT1A	-	TRUE	AluY	SINE,Alu
chr1	16932931	C	A	0.00191	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr3	10005159	A	T	0.00939	EMC3	-	FALSE	(AT)n	SINE,Alu
chr1	151955393	T	C	7.77942E-05	S100A10	-	FALSE
chr8	27661035	T	A	0.00314	ESCO2	+	FALSE	A-rich	SINE,Alu
chr5	151041883	G	A	0.00343	SPARC	-	FALSE
chr5	31553951	C	T	0.00240	C5orf22	+	FALSE
chr4	177252326	A	G	0.00554	SPCS3	+	TRUE
chr12	125511952	A	G	0.00138	THRIL	-	FALSE	AluSx1	SINE,Alu
chr19	9672318	T	C	2.91158E-05		.	FALSE	AluJr	SINE,Alu
chr1	36923643	G	C	0.00409	MRPS15	-	FALSE
chr1	87328397	A	T	0.00252	SEP15	-	FALSE
chr1	28661657	A	G	0.00011	MED18	+	TRUE	AluSg	SINE,Alu
chr4	57326315	A	G	0.00281	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	1593857	T	C	0.00217	CDK11B,SLC35E2B	-	FALSE
chr1	109746825	A	G	0.00281	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr1	61922437	G	T	0.00359	NFIA	+	FALSE
chr1	157092835	G	A	0.00595		.	FALSE
chr1	19232017	T	G	0.00723	IFFO2	-	FALSE
chr15	33064148	T	C	1.59288E-05	FMN1	-	FALSE
chr2	128603088	T	C	0.00141		.	FALSE	AluSp	SINE,Alu
chr1	16945409	T	A	0.00105	CROCCP2	-	FALSE
chr4	169910101	C	T	0.00026	CBR4	-	FALSE
chr3	191115082	G	C	0.00980	CCDC50	+	FALSE
chr3	15113681	T	C	0.00048	RBSN	-	TRUE	AluSz6	SINE,Alu
chr6	31506635	T	G	6.78064E-05		.	FALSE
chr4	39550612	T	C	0.00023	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr1	10221287	A	G	0.00961	UBE4B	+	FALSE
chr7	38765149	C	T	0.00785	VPS41	-	FALSE
chr7	128829066	A	G	0.00816	SMO	+	FALSE
chr1	23885230	C	G	0.00075	ID3	-	FALSE
chr4	7764148	G	A	2.22190E-11	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	145512078	A	G	0.00907	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	1477244	T	C	0.00365	SSU72	-	FALSE
chr6	42856007	A	G	0.00212	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	59122910	G	A	0.00251	MYSM1	-	FALSE
chr1	118068558	G	A	0.00644		.	FALSE
chr1	203709034	A	G	0.00049	ATP2B4	+	FALSE
chr16	48386442	A	G	0.00964	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr5	77655330	T	C	0.00050	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr17	37006214	T	C	0.00706		.	FALSE	AluSx	SINE,Alu
chr2	24223291	A	G	0.00512	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	66100450	G	A	0.00528	LEPR	+	FALSE
chr1	113001409	C	T	2.24539E-06	CTTNBP2NL	+	FALSE	AluJr	SINE,Alu
chr1	16889624	T	C	3.50465E-05	NBPF1	-	TRUE
chr10	101992783	T	C	0.00313	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr1	145281408	C	T	9.69497E-05	NBPF20,NOTCH2NL	+	FALSE
chr2	232325426	A	T	0.00547	NCL	-	FALSE	(TCA)n	SINE,Alu
chr19	18476206	A	G	0.00156	PGPEP1	+	TRUE	AluJb	SINE,Alu
chr1	155039464	C	T	2.82294E-06	EFNA4	+	FALSE
chr14	74179051	T	C	0.00982	PNMA1	-	FALSE	Charlie15b	SINE,Alu
chr1	46774783	A	G	0.00163	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr7	96318078	A	T	0.00790		.	FALSE
chr3	16357494	G	A	2.87472E-06	RFTN1	-	FALSE
chr8	30535980	T	C	0.00038	GSR	-	TRUE	AluJr	SINE,Alu
chr2	223807622	G	T	0.00875	ACSL3	+	FALSE
chr2	37328075	T	C	2.30710E-05		.	FALSE
chr1	7827697	G	C	0.00760	CAMTA1	+	FALSE
chr1	209605640	A	C	0.00581	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chr1	203821865	C	T	0.00222	ZC3H11A	+	FALSE
chr1	145512937	A	G	1.47906E-06	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	52520867	T	A	0.00206	TXNDC12	-	FALSE
chr4	178256913	C	G	4.41796E-05	NEIL3	+	FALSE
chr11	76733943	A	G	0.00925	ACER3	+	FALSE	A-rich	SINE,Alu
chr1	87811249	T	A	0.00653	LMO4	+	FALSE
chr1	26308882	A	G	3.99595E-05	PAFAH2	-	FALSE
chr4	17804847	T	C	0.00306	DCAF16	-	TRUE	AluSx	SINE,Alu
chr11	118661811	T	G	0.00582	DDX6	-	FALSE
chr2	11323078	C	T	0.00539	ROCK2	-	FALSE
chr1	9162456	T	C	0.00043		.	FALSE	AluSx	SINE,Alu
chr1	21795388	A	G	0.00790	NBPF3	+	FALSE
chr8	124027562	C	T	0.00674	DERL1	-	FALSE
chrX	77083538	T	C	0.00055	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	75671215	C	T	0.00019	SLC44A5	-	FALSE
chr5	6748659	T	C	0.00032	PAPD7	+	FALSE
chr1	87213174	T	G	0.00081	SH3GLB1	+	FALSE
chr2	20648961	T	C	0.00304	RHOB	+	FALSE
chr1	154440548	G	T	0.00123	IL6R	+	FALSE	(TTGTT)n	SINE,Alu
chr1	156262653	A	C	0.00128	GLMP	-	FALSE
chr12	49075983	C	G	0.00321	KANSL2	-	FALSE
chr1	150241230	G	T	7.51943E-05	APH1A	-	FALSE
chr1	32661594	C	T	0.00528	TXLNA	+	FALSE	(T)n	SINE,Alu
chr1	10519946	T	C	0.00033		.	FALSE	AluJr	SINE,Alu
chr1	87572817	C	T	0.00514	HS2ST1	+	FALSE
chr8	146280802	C	T	0.00492	C8orf33	+	FALSE	LTR13	SINE,Alu
chr15	65442483	T	C	0.00523	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	990773	C	T	0.00705	AGRN	+	FALSE
chr12	9098987	T	A	0.00180	M6PR	-	FALSE
chr5	40830050	T	C	0.00042		.	FALSE	AluSp	SINE,Alu
chr1	145500918	T	C	0.00127	NBPF20,NBPF10,LIX1L	+	FALSE
chr2	173462230	G	T	0.00100	PDK1	+	FALSE	MIRc	SINE,Alu
chr1	32799512	A	T	0.00929	MARCKSL1	-	FALSE
chr7	33060946	A	G	0.00542	NT5C3A	-	FALSE
chr1	179042550	A	G	0.00831	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr2	85776765	T	C	0.00426	GGCX	-	TRUE	AluSz6	SINE,Alu
chr2	233446265	T	C	0.00177	EIF4E2	+	FALSE
chr2	3192912	G	A	0.00168	TSSC1	-	FALSE
chr3	184766301	T	C	0.00025	VPS8	+	FALSE
chr1	10518831	T	C	0.00410		.	FALSE	AluSx1	SINE,Alu
chr16	23582262	T	G	0.00101	UBFD1	+	FALSE
chr15	90819472	A	G	0.00068		.	FALSE	AluSx	SINE,Alu
chr7	99649179	A	G	0.00360	ZSCAN21	+	TRUE	AluY	SINE,Alu
chr3	172115465	T	A	0.00170	FNDC3B	+	FALSE
chr3	39453160	G	A	0.00000	RPSA	+	FALSE
chr15	89739348	A	G	0.00035	ABHD2	+	FALSE	MER5A	SINE,Alu
chr1	220231487	T	C	0.00013	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	10519951	T	C	0.00672		.	FALSE	AluJr	SINE,Alu
chr1	16892135	G	A	0.00508	NBPF1	-	FALSE
chrX	77083548	T	C	0.00205	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	36067821	T	C	1.12344E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	167389822	C	T	0.00935	POU2F1	+	FALSE
chr2	55462751	T	A	0.00613	RPS27A	+	FALSE
chr2	129024313	A	G	0.00612	HS6ST1	-	FALSE
chr1	11847902	C	A	0.00364	C1orf167,MTHFR	+,-	FALSE
chr3	44791062	T	C	0.00014	KIAA1143	-	FALSE
chr1	144053664	A	C	0.00050		.	FALSE
chr1	19542456	T	C	0.00323	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	28661692	A	G	2.56757E-06	MED18	+	TRUE	AluSg	SINE,Alu
chr1	19984104	A	C	0.00638	MINOS1-NBL1,NBL1	+	FALSE
chr1	15993013	G	A	1.16652E-10		.	FALSE
chr1	54871709	T	C	0.00110	SSBP3	-	FALSE
chr6	31378510	G	A	0.00104		.	FALSE
chr6	24719404	C	A	0.00024		.	FALSE
chr7	5568366	A	G	0.00400	ACTB	-	FALSE
chr1	186370281	C	G	0.00387	C1orf27,OCLM	+	FALSE
chr1	6283332	T	C	0.00387	ICMT	-	TRUE	AluSx3	SINE,Alu
chr5	6668842	C	T	4.46208E-05	SRD5A1	+	FALSE
chr1	36068281	T	C	0.00026	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	220037666	A	G	0.00796	CNPPD1	-	FALSE
chr1	205056844	T	A	0.00225	RBBP5	-	FALSE
chr1	21904374	A	C	0.00198	ALPL	+	FALSE
chr1	35647099	A	G	0.00092	SFPQ	-	FALSE
chr3	42599091	G	A	0.00196	SEC22C	-	FALSE
chr1	40923019	G	A	0.00019	ZFP69B	+	FALSE
chr1	92195511	C	T	0.00681	TGFBR3	-	FALSE
chr12	51324122	A	G	0.00226	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr11	63394020	A	T	0.00175	ATL3	-	FALSE
chr1	26188238	G	A	0.00148	PAQR7	-	FALSE	AluSp	SINE,Alu
chr14	74431191	A	G	0.00670	ENTPD5	-	FALSE
chr16	48387215	A	G	0.00864	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr12	49745431	A	G	0.00033	DNAJC22	+	TRUE	AluSx3	SINE,Alu
chr6	160113872	A	G	0.00863	SOD2	-	FALSE
chr1	10093371	C	T	0.00264	UBE4B	+	FALSE
chr1	162354203	A	G	0.00956	C1orf226	+	FALSE
chr2	1637648	T	C	9.03854E-11	PXDN	-	FALSE
chr3	10302056	A	G	0.00018	TATDN2	+	FALSE
chr3	75474643	T	C	0.00850	FAM86DP	-	TRUE	AluJo	SINE,Alu
chr2	32535568	A	G	0.00192		.	FALSE	MER8	SINE,Alu
chr1	9664845	C	T	1.14015E-08	TMEM201	+	FALSE
chr19	583145	G	A	0.00227	BSG	+	FALSE
chr1	45976261	T	A	0.00018	MMACHC	+	FALSE
chr5	53840199	G	T	0.00857	SNX18	+	FALSE
chr6	158613390	T	C	0.00416	GTF2H5	+	FALSE
chr17	65334885	T	C	2.77388E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr3	150261002	C	T	0.00044	SERP1	-	FALSE
chr1	28825337	A	G	0.00191	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr2	32534897	A	G	0.00680		.	FALSE	AluSx1	SINE,Alu
chr2	37331019	T	C	0.00597		.	FALSE	AluSx1	SINE,Alu
chr9	130268407	C	G	0.00902	FAM129B	-	FALSE	(CTCA)n	SINE,Alu
chr9	132268259	A	G	0.00032	LINC00963	+	TRUE	AluJb	SINE,Alu
chr1	19586360	T	C	0.00023	MRTO4	+	FALSE
chr4	128756704	A	G	0.00271		.	FALSE	AluSx	SINE,Alu
chr1	24798089	G	A	0.00815	NIPAL3	+	FALSE
chr2	73460314	C	T	0.00333	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr1	24862649	A	G	0.00074	RCAN3	+	FALSE
chr1	201846675	C	T	0.00146	IPO9	+	FALSE
chr1	20238572	A	T	0.00950	OTUD3	+	FALSE
chr1	142449	G	A	0.00073		.	FALSE	MIRb	SINE,Alu
chr1	39470977	C	A	0.00347	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr1	247353355	G	A	0.00628		.	FALSE
chr16	74655596	T	G	0.00028	RFWD3	-	FALSE	AluSx	SINE,Alu
chr1	28826085	A	G	0.00212	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	6282324	T	C	0.00013	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	47844500	T	G	0.00169	CMPK1	+	FALSE
chr2	171699153	C	G	0.00247	GAD1	+	FALSE
chr2	187544230	T	A	0.00930	ITGAV	+	FALSE
chr1	143399383	T	A	0.00198		.	FALSE	L1MC4	SINE,Alu
chr16	10623571	T	C	0.00329	EMP2	-	TRUE	AluSp	SINE,Alu
chr19	19791650	A	G	1.64958E-05	ZNF101	+	TRUE	AluSc	SINE,Alu
chr15	39880358	C	T	0.00028	THBS1	+	FALSE
chr19	33882222	G	A	0.00236	PEPD	-	FALSE
chr5	21883662	T	G	0.00108	CDH12	-	FALSE
chr5	138705183	T	A	9.01084E-05	PAIP2,SLC23A1	+,-	FALSE
chr1	10367424	G	A	0.00286	KIF1B	+	FALSE	AluSx	SINE,Alu
chr1	114940216	T	G	0.00674	TRIM33	-	FALSE	(T)n	SINE,Alu
chr3	32496328	C	A	0.00013	CMTM7	+	FALSE
chr10	17362784	A	G	0.00261	ST8SIA6	-	FALSE
chr1	10318652	C	G	0.00047	KIF1B	+	FALSE
chr1	149819554	T	C	0.00137		.	FALSE	MLT1C2	SINE,Alu

RBP	CELF1
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR695XOD
Platform	HiSeq
Pubmed ID	32252787

CELF1 - Target Gene Network