RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	148251079	T	C	0.00880	NBPF8,NBPF14,NBPF9	-	FALSE	L1MC4	SINE,Alu
chr1	36921372	A	T	0.00259	MRPS15	-	FALSE
chr1	33150598	T	C	4.12722E-05	SYNC,RBBP4	+,-	FALSE
chr4	17804847	T	C	0.00512	DCAF16	-	TRUE	AluSx	SINE,Alu
chr2	37331037	T	C	0.00026		.	FALSE	AluSx1	SINE,Alu
chr15	85185502	T	C	0.00058	WDR73,SCAND2P	+,-	FALSE	AluSc	SINE,Alu
chr5	98109389	T	C	0.00234	RGMB	+	FALSE
chr1	44171143	C	A	0.00118	KDM4A-AS1,KDM4A	+,-	FALSE
chr1	10519910	T	C	7.27344E-07		.	FALSE	AluJr	SINE,Alu
chr1	322711	A	G	0.00149		.	FALSE
chr3	52873072	A	C	0.00233	TMEM110-MUSTN1,TMEM110	-	FALSE
chr3	196670082	A	T	0.00261	NCBP2-AS2	+	FALSE
chr1	24861704	G	A	0.00345	RCAN3	+	FALSE
chr8	9639522	A	G	0.00823	TNKS	+	TRUE	MER53	SINE,Alu
chr1	16889864	C	A	6.58858E-05	NBPF1	-	FALSE
chr2	37330540	T	C	0.00854		.	FALSE	AluSq2	SINE,Alu
chr2	174090339	A	C	2.67746E-05	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr3	14183410	T	C	1.62266E-06	TMEM43	+	FALSE
chr17	73886249	T	C	0.00069	TRIM65	-	TRUE	FRAM	SINE,Alu
chr11	65544575	T	C	0.00200	AP5B1	-	TRUE	AluJb	SINE,Alu
chr10	75008731	T	C	8.90942E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr17	65334802	T	C	1.10547E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	39470995	A	C	0.00036	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr12	120898697	A	G	0.00488	GATC	+	TRUE	AluY	SINE,Alu
chr1	46828460	C	T	0.00393	NSUN4	+	FALSE
chr1	204525669	A	G	0.00169	MDM4	+	TRUE	AluSz	SINE,Alu
chr6	31324643	G	C	5.95617E-06		.	FALSE
chr1	10519148	T	C	0.00214		.	FALSE	AluSx3	SINE,Alu
chr2	96915238	T	C	0.00510		.	FALSE	AluJr	SINE,Alu
chr6	42094498	T	C	0.00931	C6orf132	-	TRUE	AluSq2	SINE,Alu
chr1	1594498	C	T	0.00024	CDK11B,SLC35E2B	-	FALSE
chr12	69237042	A	G	0.00413	MDM2	+	TRUE
chr2	74442407	A	G	0.00122	MTHFD2	+	FALSE
chr1	100489835	A	G	0.00043	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr1	38327700	T	C	0.00510	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	6583593	T	C	0.00088	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	2241376	C	T	0.01000	SKI	+	FALSE
chr3	41281407	G	T	0.00288	CTNNB1	+	FALSE
chr1	19934900	G	A	0.00605	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	101444796	C	T	0.00453	SLC30A7	+	FALSE
chr2	24227417	A	G	0.00831		.	FALSE	AluSc	SINE,Alu
chr1	26449882	A	G	0.00783	PDIK1L	+	FALSE
chr19	58374130	C	T	0.00124	ZNF587	+	FALSE
chr7	29961884	C	G	0.00024	SCRN1	-	FALSE
chr1	220323448	C	T	0.00986	RAB3GAP2	-	FALSE
chr2	47398328	G	A	0.00434	CALM2	-	FALSE
chr1	120695554	G	A	0.00492		.	FALSE
chr2	24225006	A	G	0.00141		.	FALSE	AluSx	SINE,Alu
chr1	10519048	T	C	0.00637		.	FALSE	AluSx3	SINE,Alu
chr1	118167515	C	T	3.85037E-05	FAM46C	+	FALSE
chr3	52289709	G	C	4.88711E-11	WDR82	-	FALSE	MIR	SINE,Alu
chr1	145511988	A	G	0.00965	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chrX	123045407	A	G	0.00153	XIAP	+	TRUE	AluJo	SINE,Alu
chr1	92862879	A	G	3.90108E-09		.	FALSE	AluJr	SINE,Alu
chr19	42753034	A	G	0.00883	ERF	-	FALSE
chr5	78532658	C	T	0.00882	JMY	+	FALSE
chr3	39452772	A	G	0.00127	RPSA	+	FALSE
chr1	9162223	T	C	0.00778		.	FALSE	AluSx	SINE,Alu
chr3	49395694	T	C	0.00074	GPX1	-	FALSE
chr5	32124827	G	T	0.00047	GOLPH3	-	FALSE
chr1	145509570	A	G	0.00043	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr7	55266417	T	C	0.00201	EGFR	+	FALSE
chr1	154321623	G	A	0.00782	ATP8B2	+	FALSE
chr4	95588274	G	A	0.00095	PDLIM5	+	FALSE
chr1	16909220	T	C	0.00449	NBPF1	-	FALSE
chr1	33071043	A	G	4.49838E-05	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr5	73932315	T	C	0.00420	ENC1	-	FALSE
chr1	15844615	A	G	0.00792	CASP9	-	FALSE
chr7	128293103	A	C	0.00313	LINC01000	+	FALSE
chr1	1549354	G	A	0.00132		.	FALSE	HAL1	SINE,Alu
chr1	113672640	A	G	0.00629		.	FALSE	AluJb	SINE,Alu
chr1	9328255	A	G	0.00729	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	145511991	A	G	0.00044	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	99812864	A	G	0.00458	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	23636277	A	T	0.00632	HNRNPR	-	FALSE
chr2	70452142	T	G	0.00191	TIA1	-	FALSE
chr1	180082702	G	C	0.00019	CEP350	+	FALSE
chr1	32799512	A	T	0.00929	MARCKSL1	-	FALSE
chr1	205738843	C	T	0.00072	RAB29	-	FALSE	AluSz6	SINE,Alu
chr13	50102992	T	C	0.00956	SETDB2-PHF11,PHF11	+	FALSE	L2a	SINE,Alu
chr1	205738302	G	A	0.00661	RAB29	-	FALSE
chr1	62628606	A	G	0.00164	PATJ	+	TRUE	AluSg4	SINE,Alu
chr3	150262004	A	T	0.00167	SERP1	-	FALSE
chr5	85916592	G	A	0.00018		.	FALSE
chr3	15114398	T	C	0.00758	RBSN	-	TRUE	AluY	SINE,Alu
chr1	142688506	T	C	4.54862E-05		.	FALSE
chr12	56510698	C	G	0.00944	RPL41	+	FALSE
chr1	100658578	G	A	5.62742E-07	DBT	-	FALSE
chr16	1727060	G	A	0.00922	CRAMP1	+	FALSE
chr1	225707042	T	C	4.11654E-05	ENAH	-	FALSE
chr1	92195511	C	T	0.00681	TGFBR3	-	FALSE
chr1	17393260	T	C	0.00094	PADI2	-	FALSE
chr1	25570562	T	A	0.00028	RSRP1	-	FALSE	Alu	SINE,Alu
chr1	31905887	A	C	4.57629E-05	SERINC2	+	FALSE
chr1	144607387	G	C	0.00016	NBPF20	+	FALSE
chr1	26158906	C	A	0.00362	MTFR1L,AUNIP	+,-	FALSE
chr14	50053348	G	A	0.00067		.	FALSE	7SLRNA	SINE,Alu
chr2	176791183	T	C	0.00252	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	67874697	T	C	0.00186	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	24864008	A	G	0.00601		.	FALSE
chr15	65442602	T	C	8.94083E-05	CLPX	-	TRUE	AluSg4	SINE,Alu
chr5	93018883	A	T	0.00181	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr2	217366570	A	G	0.00332		.	FALSE	AluSz	SINE,Alu
chr12	27848051	C	A	0.00245	PPFIBP1	+	FALSE
chr1	167973198	A	G	0.00061	DCAF6	+	FALSE
chr1	32508478	C	T	0.00509	KHDRBS1	+	FALSE
chr2	37478348	T	A	0.00392	PRKD3	-	FALSE
chr6	13788387	T	C	0.00240	MCUR1	-	TRUE	AluSx	SINE,Alu
chr17	4929004	A	G	0.00030	KIF1C	+	TRUE	AluY	SINE,Alu
chr1	1653093	A	G	0.00036	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr4	39551167	T	C	0.00361	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	236716959	C	T	0.00727	HEATR1	-	FALSE
chr1	16945570	A	G	0.00251	CROCCP2	-	FALSE
chr1	204521159	A	G	0.00158	MDM4	+	TRUE	AluSp	SINE,Alu
chr1	148009510	G	A	1.20657E-06	NBPF8	-	FALSE
chr3	133307642	T	G	0.00523	CDV3	+	FALSE	(TT)n	SINE,Alu
chr8	48889705	A	G	0.00339	MCM4	+	TRUE	AluSx3	SINE,Alu
chr1	87213175	A	T	0.00082	SH3GLB1	+	FALSE
chr4	6689813	C	A	0.00141		.	FALSE	L2b	SINE,Alu
chr2	85773595	T	C	0.00774	GGCX	-	TRUE	AluSx1	SINE,Alu
chr2	86249930	T	C	0.00054	LOC90784	-	TRUE	AluJr	SINE,Alu
chr12	96661613	A	G	0.00183	ELK3	+	FALSE
chr1	92862862	A	G	0.00024		.	FALSE	AluJr	SINE,Alu
chr1	27733305	A	C	0.00374	WASF2	-	FALSE
chr1	145512944	A	G	0.00171	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	188597556	A	G	0.00309	LPP	+	FALSE
chr1	168218671	A	G	0.00974		.	FALSE	AluSz	SINE,Alu
chr2	38971639	A	T	0.00019	SRSF7	-	FALSE
chr1	168220363	A	G	0.00488		.	FALSE	AluSz6	SINE,Alu
chr1	33149400	A	G	0.00258	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	45476889	C	G	0.00969	HECTD3	-	FALSE
chr6	159396143	T	C	0.00185		.	FALSE	AluSc	SINE,Alu
chr10	22824828	A	T	0.00225	PIP4K2A	-	FALSE
chr1	116234083	T	A	0.00477	VANGL1	+	FALSE
chr2	228421461	G	C	0.00069	AGFG1	+	FALSE
chr1	10518733	T	C	0.00050		.	FALSE	AluSx1	SINE,Alu
chr1	10520725	T	C	0.00795	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	200375418	C	T	0.00671	ZNF281	-	FALSE
chr3	10192784	A	G	1.73909E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	210004332	G	A	0.00813	DIEXF	+	FALSE
chr1	146033815	G	A	0.00307	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr1	894378	T	A	0.00068	NOC2L	-	FALSE
chr5	49692633	T	G	0.00808	EMB	-	FALSE
chr1	16112795	A	G	1.78234E-05	FBLIM1	+	FALSE
chr9	21331119	C	T	0.00343	KLHL9	-	FALSE	L1M	SINE,Alu
chrX	118673382	T	C	0.00021	CXorf56	-	TRUE	AluSz	SINE,Alu
chr3	142772593	G	A	0.00135	U2SURP	+	FALSE
chr1	31905889	A	G	0.00565	SERINC2	+	FALSE
chr1	145512166	T	A	0.00823	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr5	81571669	C	T	0.00143	RPS23	-	FALSE
chr5	40835311	A	T	0.00632	RPL37	-	FALSE
chr1	1534614	T	C	5.67045E-11	FNDC10	-	FALSE
chr2	47562582	G	A	0.00484	LOC101927043	-	FALSE	BC200	SINE,Alu
chr1	206635245	T	C	0.00238	SRGAP2	+	FALSE
chr1	10517691	T	C	0.00558		.	FALSE	AluSx1	SINE,Alu
chr1	28864731	A	G	0.00477	RCC1	+	FALSE
chr1	75196073	C	T	0.00159	CRYZ	-	FALSE
chr12	98942665	A	G	1.31028E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	900725	T	G	0.00110	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	160967833	T	C	6.62581E-12	F11R	-	TRUE	AluSp	SINE,Alu
chr4	42003671	A	G	0.00535	SLC30A9	+	FALSE
chr2	72405098	C	A	0.00646	EXOC6B	-	FALSE
chr2	231683849	A	G	0.00786	CAB39	+	FALSE
chr1	178887208	A	T	0.00239	RALGPS2	+	FALSE
chr5	139931632	C	G	0.00052	SRA1	-	FALSE
chr3	195435168	T	G	0.00111	LINC00969	+	FALSE
chr3	15113655	T	C	6.08503E-07	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	15818081	T	C	9.65448E-05	CASP9	-	TRUE	AluJb	SINE,Alu
chr1	179044100	A	G	0.00219	FAM20B	+	TRUE	AluSx	SINE,Alu
chr2	99812988	A	G	0.00474	MRPL30	+	TRUE	AluJb	SINE,Alu
chr5	74072634	T	A	0.00187	NSA2	+	FALSE
chr1	6683580	C	A	0.00516	PHF13	+	FALSE
chr5	130537666	A	G	9.26326E-06	LYRM7	+	TRUE	AluJb	SINE,Alu
chr1	33148736	A	G	4.97736E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	144828795	C	G	0.00887	NBPF20,NBPF9	+	FALSE
chr1	36068231	T	C	0.00121	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	11785234	A	G	0.00339		.	FALSE	AluJr	SINE,Alu
chr2	11321880	C	T	0.00064	ROCK2	-	FALSE	AluSx1	SINE,Alu
chr19	53914806	A	G	0.00221	ZNF765	+	TRUE	AluSp	SINE,Alu
chr1	204526727	A	G	0.00033	MDM4	+	TRUE	AluSx	SINE,Alu
chr16	747230	C	G	0.00269	FBXL16	-	FALSE
chr16	89630630	C	T	0.00296	RPL13	+	FALSE
chr12	27574427	A	G	7.32829E-06	ARNTL2,ARNTL2-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	220231263	T	C	0.00116	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr17	40466890	G	T	0.00260	STAT3	-	FALSE	AluSc8	SINE,Alu
chr3	183976477	C	T	0.00215	ECE2	+	FALSE
chr7	94297293	G	T	0.00573	PEG10	+	FALSE
chr3	196080528	T	C	0.00700	UBXN7	-	TRUE	AluSx	SINE,Alu
chr4	6718775	G	T	3.33433E-09	BLOC1S4	+	FALSE
chr10	865825	C	T	0.00088	LARP4B	-	FALSE
chr6	42849616	A	G	0.00092	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr12	72096330	A	G	0.00014	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr3	183899832	C	T	1.28780E-06	AP2M1	+	FALSE
chr1	229736656	G	C	0.00793	TAF5L	-	FALSE
chr16	3207363	C	T	0.00104		.	FALSE
chr1	152884246	G	T	0.00536	IVL	+	FALSE
chr1	25688276	A	G	0.00187	TMEM50A	+	FALSE
chr1	160967843	T	C	0.00247	F11R	-	TRUE	AluSp	SINE,Alu
chr1	204525672	A	G	0.00375	MDM4	+	TRUE	AluSz	SINE,Alu
chr3	196662641	T	C	0.00089	NCBP2	-	FALSE
chr16	58054477	T	C	0.00180	USB1	+	FALSE
chr15	85190470	G	T	8.70862E-05	WDR73	-	FALSE
chr1	33149495	A	G	0.00675	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	55619569	C	T	0.00477	USP24	-	FALSE
chr19	21474901	T	C	1.34658E-06	ZNF708	-	TRUE	AluSc	SINE,Alu
chr1	6282259	T	C	0.00072	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	92862804	A	G	0.00043		.	FALSE	AluJr	SINE,Alu
chr3	179042866	A	G	0.00806	ZNF639	+	FALSE	AluSp	SINE,Alu
chr1	33148362	A	T	0.00870	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr3	16301791	G	A	4.37274E-05	DPH3	-	FALSE
chr3	172115465	T	A	0.00170	FNDC3B	+	FALSE
chr3	52237970	C	T	0.00017	ALAS1	+	FALSE
chr1	10521172	T	C	0.00178	DFFA	-	TRUE	AluY	SINE,Alu
chr1	24296874	G	A	0.00627		.	FALSE	AluSg	SINE,Alu
chr1	226171400	T	C	0.00359	SDE2	-	TRUE	BC200	SINE,Alu
chr1	16889864	C	A	0.00020	NBPF1	-	FALSE
chr1	53712215	G	T	0.00458	LRP8	-	FALSE
chr1	36068243	T	C	0.00217	PSMB2	-	TRUE	AluSc	SINE,Alu
chr4	165999188	T	C	0.00751	TMEM192	-	TRUE	FLAM_C	SINE,Alu
chr16	22296860	A	G	0.00041	EEF2K	+	TRUE	AluJo	SINE,Alu
chr1	144813815	A	G	2.28281E-05	NBPF20,NBPF9	+	FALSE
chr1	33068221	A	G	0.00448	ZBTB8A	+	TRUE	AluY	SINE,Alu
chr4	7764017	T	C	0.00028	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	144594170	C	T	0.00636	NBPF20	+	FALSE
chr4	16258050	C	T	0.00617	TAPT1-AS1	+	FALSE
chr3	49394834	G	A	0.00000	GPX1	-	FALSE
chr1	92862682	A	G	0.00381		.	FALSE	AluJr	SINE,Alu
chr2	109301897	T	C	0.00306	LIMS1	+	FALSE
chr1	148023067	C	T	0.00772	NBPF8	-	FALSE
chr4	128756579	A	G	0.00501		.	FALSE	AluSx	SINE,Alu
chr1	174983207	T	G	0.00681	MRPS14	-	FALSE
chr1	2336210	C	T	0.00509	RER1	+	FALSE
chr4	57326917	A	G	5.41162E-06	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	11084345	C	T	0.00558	TARDBP	+	FALSE
chr2	86252222	T	C	0.00468	POLR1A	-	TRUE	AluSq2	SINE,Alu
chrX	16782947	A	G	0.00225		.	FALSE	AluJb	SINE,Alu
chr2	37330612	T	C	0.00136		.	FALSE	AluSq2	SINE,Alu
chr1	145369709	A	G	0.00607	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	145281543	C	T	0.00031	NBPF20,NOTCH2NL	+	FALSE
chr1	53289759	A	G	0.00329	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr5	37290323	T	C	0.00029		.	FALSE	AluSz	SINE,Alu
chr1	94351064	A	T	0.00620	GCLM	-	FALSE
chr3	57743246	G	A	0.00221	SLMAP	+	FALSE
chr1	179852074	T	C	0.00033	TOR1AIP1	+	FALSE
chr1	214524496	T	C	0.00114	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	204524840	A	G	0.00557	MDM4	+	TRUE	AluSx	SINE,Alu
chr7	75958147	T	A	0.00917	YWHAG	-	FALSE
chr17	65335393	T	C	4.59862E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr18	11852612	G	T	0.00410	GNAL,CHMP1B	+	FALSE	(T)n	SINE,Alu
chr1	143399383	T	A	0.00053		.	FALSE	L1MC4	SINE,Alu
chr19	3467751	C	A	0.00182	NFIC	+	FALSE	(TA)n	SINE,Alu
chr1	67874689	T	C	7.42611E-10	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr17	4928967	T	G	0.00921	KIF1C	+	FALSE	AluY	SINE,Alu
chr1	86118417	T	G	0.00211	ZNHIT6	-	FALSE
chr1	167511256	T	C	0.00838	CREG1	-	FALSE
chr18	6986227	G	A	3.73397E-05	LAMA1	-	FALSE
chr1	16919961	C	T	0.00133	NBPF1	-	FALSE
chr2	201735790	G	C	0.00671	PPIL3	-	FALSE
chr6	150046603	T	C	0.00763	NUP43	-	TRUE	AluSq2	SINE,Alu
chr2	47130527	G	A	0.00462	MCFD2	-	FALSE
chr1	184762627	T	C	0.00519	FAM129A	-	TRUE	AluSz	SINE,Alu
chr2	206987738	T	C	0.00859		.	FALSE	AluJb	SINE,Alu
chr5	40832557	G	T	5.89786E-05	RPL37	-	FALSE
chr1	109474776	A	G	0.00149	GPSM2,CLCC1	+,-	FALSE	AluSz	SINE,Alu
chr15	51294995	G	A	0.00268	AP4E1	+	FALSE
chr5	37290397	T	C	0.00305		.	FALSE	AluSz	SINE,Alu
chr1	26143727	A	T	0.00602	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	1273359	T	G	0.00254	DVL1	-	FALSE
chr4	25236017	T	C	2.76644E-09	PI4K2B	+	FALSE
chr3	122293773	A	T	0.00852	DTX3L	+	FALSE
chr17	36936846	C	T	0.00277	PIP4K2B	-	FALSE
chr16	10623571	T	C	0.00329	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	100440563	A	G	0.00732	SLC35A3	+	FALSE	AluJb	SINE,Alu
chr1	109746819	A	G	0.00390	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr1	53288870	A	G	0.00501	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	191745647	C	T	2.95764E-05	GLS	+	FALSE
chr1	35319605	A	C	0.00226	SMIM12	-	FALSE	AluSg	SINE,Alu
chr1	93617403	T	G	0.00053	TMED5	-	FALSE
chr1	230416412	C	G	0.00514	GALNT2	+	FALSE
chr2	85554792	C	A	0.00634	TGOLN2	-	FALSE
chr14	31916944	T	C	1.05468E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	10521237	T	C	0.00348	DFFA	-	TRUE	AluY	SINE,Alu
chr7	137561083	T	C	0.00194	CREB3L2	-	FALSE	(GT)n	SINE,Alu
chr2	206987561	T	C	0.00235		.	FALSE	AluJb	SINE,Alu
chr2	33007710	C	T	0.00743	TTC27	+	FALSE
chr1	146628742	T	G	0.00102	PRKAB2	-	FALSE
chr14	50361170	C	T	0.00096	ARF6	+	FALSE	(T)n	SINE,Alu
chr3	125033835	T	G	0.00385	ZNF148	-	FALSE	AluJb	SINE,Alu
chr3	194362721	G	A	5.25740E-07	LSG1	-	FALSE
chr1	33148716	T	C	0.00835	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr2	1636053	A	G	0.00189	PXDN	-	FALSE
chr6	30593890	A	G	0.00584		.	FALSE
chr3	160213317	T	A	0.00208	KPNA4	-	FALSE
chr1	16945227	G	T	0.00090	CROCCP2	-	FALSE
chr1	27662235	G	T	0.00766	TMEM222	+	FALSE
chr1	78445292	A	G	7.48186E-07	DNAJB4	+	FALSE
chr17	49042394	T	C	0.00015	SPAG9	-	TRUE	AluJb	SINE,Alu
chr12	133333936	C	T	0.00726	ANKLE2	-	FALSE	MER58A	SINE,Alu
chr2	87777087	T	C	0.00737	LINC00152	+	FALSE
chr2	32533218	A	G	0.00106		.	FALSE	AluY	SINE,Alu
chr1	211921422	T	G	0.00686	LPGAT1	-	FALSE
chr2	99812447	A	G	0.00587	MRPL30	+	TRUE	AluSx	SINE,Alu
chr5	81571876	A	T	0.00013	RPS23	-	FALSE
chr8	48890109	A	G	0.00750	MCM4	+	TRUE	AluJb	SINE,Alu
chr16	80636808	C	T	0.00881	CDYL2	-	FALSE
chr1	10521254	T	C	0.00684	DFFA	-	TRUE	AluY	SINE,Alu
chr1	16893691	C	A	0.00566	NBPF1	-	FALSE
chr14	23441536	G	A	0.00793	AJUBA	-	FALSE	GA-rich	SINE,Alu
chr4	39551008	T	C	0.00017	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	327538	A	G	0.00010		.	FALSE
chr1	182569318	G	T	0.00829	RGS16	-	FALSE
chr1	1721936	G	A	0.00731	GNB1	-	FALSE
chr16	75479467	T	C	0.00160	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr2	220422583	G	A	0.00089	OBSL1	-	FALSE
chr1	2336210	C	T	0.00206	RER1	+	FALSE
chr1	93617406	A	T	0.00275	TMED5	-	FALSE
chr3	50686350	T	G	2.12445E-05	MAPKAPK3	+	FALSE
chr6	83921257	G	T	0.00876	ME1	-	FALSE
chr15	72635829	A	C	0.00054	HEXA	-	FALSE
chr1	6282400	T	C	0.00132	ICMT	-	TRUE	AluSz	SINE,Alu
chr17	48771484	C	A	0.00737	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr1	9161550	G	A	0.00196		.	FALSE
chr11	65267608	A	G	0.00038	MALAT1	+	FALSE
chr4	2940085	T	C	0.00801	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	36642420	T	C	0.00358	MAP7D1	+	FALSE
chr8	56985607	C	T	0.00085	RPS20	-	FALSE
chr2	219523584	C	T	0.00299	ZNF142	-	FALSE
chr1	6283264	T	C	0.00521	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	1246979	G	T	0.00168	PUSL1,CPSF3L	+,-	FALSE
chr1	24798498	C	T	0.00131	NIPAL3	+	FALSE
chr1	114940216	T	G	0.00074	TRIM33	-	FALSE	(T)n	SINE,Alu
chr8	48889672	A	G	0.00091	MCM4	+	TRUE	AluSx3	SINE,Alu
chr2	183622547	T	G	0.00346	DNAJC10	+	FALSE
chr3	195415493	C	T	0.00126	LINC00969,SDHAP2	+	FALSE	L1ME2	SINE,Alu
chr5	149363273	A	G	0.00114	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr11	75116737	G	A	0.00774	RPS3	+	FALSE
chr1	182356399	A	G	0.00740	GLUL	-	FALSE
chr1	6683582	C	A	0.00152	PHF13	+	FALSE
chr2	206982358	T	C	0.00080		.	FALSE	AluSg7	SINE,Alu
chr11	67782827	G	A	0.00163	ALDH3B1	+	FALSE
chr1	6582558	T	C	0.00479	NOL9	-	TRUE	AluSx1	SINE,Alu
chr1	46075188	C	A	0.00199	NASP	+	FALSE	A-rich	SINE,Alu
chr2	206981856	T	C	0.00174		.	FALSE	AluJb	SINE,Alu
chr5	70248477	T	A	0.00163	SMN1,SMN2	+	FALSE	L1MC5a	SINE,Alu
chr19	19791273	A	G	0.00121	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr2	204294497	C	T	0.00203	ABI2	+	FALSE
chr1	179852074	T	C	0.00338	TOR1AIP1	+	FALSE
chr1	160965379	T	C	0.00081	F11R	-	TRUE	AluSc	SINE,Alu
chr1	16905837	G	A	0.00029	NBPF1	-	FALSE
chr1	16717888	G	A	0.00979	SZRD1	+	FALSE
chr1	16945780	C	T	0.00034	CROCCP2	-	FALSE

RBP	TIA1
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR694LKY
Platform	HiSeq
Pubmed ID	32252787

TIA1 - Target Gene Network