RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	52306066	T	A	0.00154	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr4	1305799	C	T	0.00271	MAEA	+	FALSE
chr1	32953214	A	G	0.00837	ZBTB8B	+	TRUE	AluSz	SINE,Alu
chr6	33172015	T	C	5.04816E-05		.	FALSE
chr1	55317685	G	A	0.00121	DHCR24	-	FALSE	MIRb	SINE,Alu
chr1	144521099	A	G	0.00049	NBPF20	+	FALSE
chr1	112170151	A	G	0.00137	RAP1A	+	FALSE	L1ME4a	SINE,Alu
chr7	158679732	G	A	0.00456	WDR60	+	FALSE
chrX	16782911	A	G	0.00051		.	FALSE	AluJb	SINE,Alu
chr5	68788642	G	C	3.71778E-05	OCLN	+	FALSE
chr1	16932594	T	C	0.00064	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr2	37330540	T	C	0.00854		.	FALSE	AluSq2	SINE,Alu
chrX	2824317	T	C	0.00047	ARSD	-	TRUE	AluJb	SINE,Alu
chr20	35520976	T	C	0.00254	TLDC2,SAMHD1	+,-	FALSE	FLAM_A	SINE,Alu
chr7	4810530	G	A	0.00236	FOXK1	+	FALSE	(GT)n	SINE,Alu
chr3	98620372	G	A	3.94317E-05	DCBLD2	-	FALSE
chr1	19595137	C	T	0.00085	AKR7L	-	FALSE
chr1	47844500	T	G	0.00169	CMPK1	+	FALSE
chr6	52442880	G	T	5.05556E-08	TRAM2-AS1	+	FALSE
chr4	17629926	C	T	0.00319		.	FALSE	MER90	SINE,Alu
chr11	65544342	T	C	3.74920E-05	AP5B1	-	TRUE	AluJb	SINE,Alu
chr4	10076658	T	C	6.66134E-16	WDR1	-	FALSE
chr1	9326888	T	C	0.00887	H6PD	+	FALSE	AluSx1	SINE,Alu
chr1	36068276	T	C	0.00110	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	127341226	A	G	0.00049	MCM2	+	FALSE
chr3	196670092	C	G	0.00393	NCBP2-AS2	+	FALSE
chr2	112252630	A	C	0.00040	MIR4435-2HG	-	FALSE
chr9	91724517	C	T	0.00289	SHC3	-	FALSE
chr1	138266	C	T	0.00802	LOC729737	-	FALSE
chr1	85715978	C	G	0.00815	C1orf52	-	FALSE
chr1	16918734	G	C	0.00600	NBPF1	-	FALSE
chr20	43343908	G	A	9.03009E-05	KCNK15-AS1,WISP2	+,-	FALSE	(GC)n	SINE,Alu
chr2	229890660	A	G	0.00596	PID1	-	FALSE
chr1	25889571	G	A	0.00344	LDLRAP1	+	FALSE
chr2	241825926	T	C	7.75373E-05	C2orf54	-	FALSE
chr1	40214333	A	G	0.00112	PPIE	+	TRUE	AluSq2	SINE,Alu
chr1	26774224	A	G	0.00295	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr15	90764219	G	A	0.00193	SEMA4B	+	FALSE
chr9	124095000	T	G	0.00764	GSN	+	FALSE	(TG)n	SINE,Alu
chr1	110950295	C	A	0.00359	LAMTOR5	-	FALSE
chr3	10192747	A	G	0.00065	VHL	+	TRUE	AluSx1	SINE,Alu
chr3	10192633	A	G	8.20807E-06	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	214529234	T	C	0.00062	PTPN14	-	TRUE
chr1	10240685	C	T	0.00422	UBE4B	+	FALSE
chr1	32697110	A	T	5.19592E-06	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	149783886	C	T	0.00526	HIST2H2BF	-	FALSE
chr1	93298756	T	C	0.00264	FAM69A,RPL5	+,-	FALSE	MER5C	SINE,Alu
chr5	256514	G	C	0.00198	SDHA	+	FALSE
chr16	719933	T	C	0.00067	RHOT2	+	FALSE
chr14	57879959	G	A	0.00144		.	FALSE
chr2	3592638	T	C	0.00164	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr1	205738302	G	A	0.00661	RAB29	-	FALSE
chr2	220370192	C	T	0.00055	GMPPA	+	FALSE
chr7	20178420	T	C	0.00053	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr14	19685015	C	G	0.00069	DUXAP10	+	FALSE
chr6	43582750	A	G	0.00844	POLH	+	TRUE	AluSx1	SINE,Alu
chr1	21904374	A	C	0.00198	ALPL	+	FALSE
chr1	1650797	A	G	3.70820E-05	CDK11B,CDK11A	-	FALSE
chr1	203767822	T	G	0.00064	ZC3H11A,ZBED6	+	FALSE
chr1	92862337	A	G	0.00595		.	FALSE	AluSp	SINE,Alu
chr3	28390351	A	G	0.00200	AZI2	-	FALSE
chr12	9464350	G	C	0.00209	LOC642846	+	FALSE
chr1	118165973	C	T	3.23914E-05	FAM46C	+	FALSE
chr10	114209888	A	G	0.00386	VTI1A	+	TRUE	AluSx3	SINE,Alu
chr2	207146631	C	A	9.52905E-05	ZDBF2	+	FALSE
chr3	10192720	A	G	0.00110	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	109475543	A	G	0.00325	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr3	47036756	C	G	0.00091	NBEAL2	+	FALSE
chr3	10193358	A	G	0.00765	VHL	+	TRUE	L1ME4a	SINE,Alu
chr18	6986227	G	A	3.73397E-05	LAMA1	-	FALSE
chr2	61705067	A	T	0.00084		.	FALSE
chr3	17201871	T	C	0.00626	TBC1D5	-	FALSE
chr6	42981525	G	C	0.00041	MEA1	-	FALSE
chr1	16907328	G	T	0.00973	NBPF1	-	FALSE
chr1	35319119	A	T	0.00111	SMIM12	-	FALSE	L1ME4c	SINE,Alu
chr1	10521103	T	C	0.00788	DFFA	-	TRUE	AluY	SINE,Alu
chrX	23721424	G	C	0.00651		.	FALSE
chr1	213071445	G	A	0.00233	FLVCR1	+	FALSE	MIR3	SINE,Alu
chr1	2326812	A	G	0.00709	RER1	+	FALSE
chr12	27848053	A	T	0.00090	PPFIBP1	+	FALSE
chr1	23833607	A	T	0.00890	E2F2	-	FALSE
chr12	56532056	G	C	0.00743	ESYT1	+	FALSE
chr2	73460316	G	T	0.00368	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr12	69237507	A	G	0.00889	MDM2	+	TRUE
chr6	3022544	T	C	0.00440	HTATSF1P2	-	TRUE	AluJr	SINE,Alu
chr5	151041876	G	T	5.29152E-05	SPARC	-	FALSE
chr2	32535797	A	G	0.00910		.	FALSE	AluJb	SINE,Alu
chr1	1721936	G	A	0.00731	GNB1	-	FALSE
chr2	37331546	T	C	0.00936		.	FALSE	AluJb	SINE,Alu
chr11	68523055	T	C	0.00524	CPT1A	-	TRUE	AluY	SINE,Alu
chr20	35521048	A	T	0.00727	TLDC2,SAMHD1	+,-	FALSE
chr8	11701343	T	C	0.00280	CTSB	-	TRUE	AluSx1	SINE,Alu
chr1	569874	C	T	0.00072		.	FALSE
chr1	144596446	A	G	0.00124	NBPF20	+	TRUE	AluJb	SINE,Alu
chr1	95660018	T	A	0.00052	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr2	101587455	C	T	0.00178	NPAS2	+	FALSE
chr4	152020782	C	T	0.00989	RPS3A	+	FALSE
chr1	220231330	T	C	0.00427	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	8413839	A	G	0.00776	RERE	-	FALSE
chr1	210004332	G	A	0.00813	DIEXF	+	FALSE
chr1	109475427	T	C	0.00185	GPSM2,CLCC1	+,-	FALSE
chr1	154317153	C	T	0.00567	ATP8B2	+	FALSE
chr1	10520258	T	C	0.00152		.	FALSE	AluSx	SINE,Alu
chr1	154557171	G	A	0.00329	ADAR	-	FALSE	A-rich	SINE,Alu
chr19	42375564	A	G	0.00117		.	FALSE	AluSx	SINE,Alu
chr1	171486912	G	A	0.00866	PRRC2C	+	FALSE
chr1	165631670	T	G	0.00197	ALDH9A1	-	FALSE
chr2	37429627	A	G	0.00330	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr21	47676711	G	A	0.00316	MCM3AP	-	FALSE
chr1	10042937	A	G	2.41028E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	894378	T	A	0.00068	NOC2L	-	FALSE
chr4	39552066	T	C	0.00370	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr2	206987096	T	C	0.00795		.	FALSE	AluSx	SINE,Alu
chr3	10005392	T	C	8.76084E-06	EMC3	-	FALSE	AluSg7	SINE,Alu
chr18	61565062	C	G	0.00207	SERPINB2	+	FALSE
chr4	3242100	G	A	0.00916	HTT	+	FALSE
chr1	46075604	A	G	0.00155	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	170403030	T	C	0.00294	FASTKD1	-	FALSE
chr16	24807247	G	A	0.00417	TNRC6A	+	FALSE
chr1	59120961	G	A	9.55369E-05	MYSM1	-	FALSE
chr1	160965379	T	C	0.00010	F11R	-	TRUE	AluSc	SINE,Alu
chr1	231557138	C	G	0.00394	EGLN1	-	FALSE
chr1	92977228	T	C	0.00206	EVI5	-	TRUE	AluJr	SINE,Alu
chr4	128757345	A	G	0.00040		.	FALSE	AluY	SINE,Alu
chr1	36068237	T	C	0.00812	PSMB2	-	TRUE	AluSc	SINE,Alu
chr7	156763332	A	G	0.00090	NOM1	+	TRUE	AluSx	SINE,Alu
chr11	9771768	A	G	0.00891	SWAP70	+	TRUE	AluSx1	SINE,Alu
chrX	24095285	A	G	0.00135	EIF2S3	+	TRUE	AluSx	SINE,Alu
chr5	125880589	T	C	0.00122	ALDH7A1	-	FALSE
chr2	91806132	T	A	0.00460		.	FALSE	MLT1H1	SINE,Alu
chr4	109542624	G	A	0.00048	RPL34	+	FALSE	MIRb	SINE,Alu
chr2	216908679	C	T	0.00988	PECR	-	FALSE
chr15	91044378	C	T	0.00453	IQGAP1	+	FALSE
chr19	33882222	G	A	0.00236	PEPD	-	FALSE
chr5	180682611	C	A	9.20591E-05	CTC-338M12.4	+	FALSE
chr5	139680027	A	G	0.00155	PFDN1	-	FALSE
chr4	139091459	T	C	9.74854E-05	SLC7A11-AS1,SLC7A11	+,-	FALSE	(TA)n	SINE,Alu
chr10	114209912	A	G	0.00060	VTI1A	+	TRUE	AluSx3	SINE,Alu
chr2	37330476	T	C	2.74271E-05		.	FALSE	AluSq2	SINE,Alu
chr1	155853061	A	G	0.00146	SYT11	+	TRUE	AluJb	SINE,Alu
chr1	145513017	A	G	3.59549E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	203839215	T	A	0.00692	SNRPE	+	FALSE
chr2	42577806	T	A	0.00276	COX7A2L	-	FALSE
chr2	128603114	T	C	0.00143		.	FALSE	AluSp	SINE,Alu
chr1	165877720	A	T	9.21169E-05	UCK2	+	FALSE
chr2	198368112	G	A	0.00127	HSPE1,HSPE1-MOB4	+	FALSE
chr17	41144251	T	G	0.00014	RUNDC1	+	FALSE
chr1	25775374	C	T	0.00710	TMEM57	+	FALSE
chr6	44417142	A	G	0.00144	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	46077218	A	G	0.00543	NASP	+	TRUE	AluSc8	SINE,Alu
chr2	85776621	T	C	0.00194	GGCX	-	TRUE	AluSz6	SINE,Alu
chr1	7980667	T	C	0.00584	TNFRSF9	-	TRUE	AluJb	SINE,Alu
chr1	10519200	T	C	0.00059		.	FALSE	AluSx3	SINE,Alu
chr3	150262004	A	T	0.00167	SERP1	-	FALSE
chr4	165998654	T	C	0.00564	TMEM192	-	TRUE	AluSg	SINE,Alu
chr8	27661035	T	A	0.00314	ESCO2	+	FALSE	A-rich	SINE,Alu
chr1	21100753	T	C	0.00624	HP1BP3	-	TRUE	AluJr	SINE,Alu
chr1	65899366	A	C	0.00593	LEPR,LEPROT	+	FALSE
chr1	204525548	A	G	0.00027	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	160966299	T	C	0.00033	F11R	-	TRUE	AluSg	SINE,Alu
chr19	58420152	C	A	0.00322	ZNF417	-	FALSE
chr1	179042692	A	G	0.00707	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	53291420	A	G	0.00011	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	20519965	G	T	0.00011	UBXN10	+	FALSE
chr1	36068325	T	C	0.00638	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	9630248	G	T	0.00764	ADAM17	-	FALSE
chr14	20940606	G	A	0.00710	PNP	+	FALSE
chr8	103841636	T	C	2.19081E-06	AZIN1	-	TRUE
chr7	920724	A	G	0.00328	GET4	+	TRUE	AluSx1	SINE,Alu
chr3	196557356	T	A	0.00032	PAK2	+	FALSE
chr1	26582091	G	A	0.00172	CEP85	+	FALSE
chr3	15114486	T	C	3.99101E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr10	54069186	C	T	0.00089	PRKG1-AS1	-	FALSE
chr1	67874697	T	C	0.00163	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	28662053	G	A	0.00158	MED18	+	FALSE	AluSq2	SINE,Alu
chr1	67874697	T	C	0.00642	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr17	26672364	C	G	0.00645	TNFAIP1	+	FALSE
chr14	67852067	A	G	2.77652E-05	EIF2S1	+	TRUE	AluJb	SINE,Alu
chr1	33149363	A	G	0.00368	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	160967856	T	C	0.00116	F11R	-	TRUE	AluSp	SINE,Alu
chr5	159492103	T	G	0.00332	TTC1	+	FALSE
chr1	44088556	C	A	0.00260	PTPRF	+	FALSE	A-rich	SINE,Alu
chr18	19445881	T	A	0.00224	MIB1	+	FALSE
chr1	28662212	A	G	0.00098	MED18	+	TRUE	AluSq2	SINE,Alu
chr3	48787674	T	C	0.00240	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr19	65146	G	A	0.00761	WASH5P	-	FALSE
chr1	241796950	C	A	1.24743E-05	OPN3,CHML	-	FALSE
chr1	19542250	T	C	0.00780	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	70718273	A	T	0.00256		.	FALSE
chr8	144940368	C	T	0.00020	EPPK1	-	FALSE
chr17	48155425	G	A	0.00603	ITGA3	+	FALSE
chr2	232319529	T	A	1.32288E-06	NCL	-	FALSE
chr10	116603648	A	G	0.00267	FAM160B1	+	FALSE
chr2	24225554	A	G	0.00419		.	FALSE	AluSq2	SINE,Alu
chr1	145586403	G	T	0.00075	NBPF20,NBPF10,PIAS3	+	FALSE
chr19	39440966	T	C	0.00011	FBXO17	-	FALSE
chr3	88104159	A	C	0.00279	CGGBP1	-	FALSE
chr1	155851620	A	G	6.99218E-05	SYT11	+	TRUE	AluSq2	SINE,Alu
chr1	10519932	T	C	0.00012		.	FALSE	AluJr	SINE,Alu
chr3	47386059	T	C	9.15846E-06	KLHL18	+	FALSE
chr6	26368938	C	T	0.00121	BTN3A2	+	FALSE
chr12	69158881	A	G	0.00219	SLC35E3	+	TRUE	AluSp	SINE,Alu
chr2	9629954	T	C	0.00308	ADAM17	-	FALSE
chr1	236716959	C	T	0.00727	HEATR1	-	FALSE
chr1	179843781	T	C	0.00888	TOR1AIP2	-	TRUE	AluJb	SINE,Alu
chr3	105294534	A	G	1.10929E-06	ALCAM	+	FALSE
chr1	121133995	G	C	0.00575	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr3	195415493	C	T	0.00126	LINC00969,SDHAP2	+	FALSE	L1ME2	SINE,Alu
chr1	33149333	A	G	0.00980	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr16	88709698	C	T	0.00330	CYBA	-	FALSE
chr7	102090451	A	G	0.00360	ORAI2	+	TRUE	AluSz	SINE,Alu
chr1	53291425	A	G	2.55913E-05	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr10	75009720	T	C	0.00016	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr1	67874689	T	C	0.00338	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	16892275	C	T	0.00087	NBPF1	-	FALSE
chr3	10192704	A	G	0.00402	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	234542410	C	A	0.00832	TARBP1	-	FALSE
chr13	21547673	G	A	0.00974	LATS2	-	FALSE	(TG)n	SINE,Alu
chr1	1252513	T	C	0.00013	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr3	98299365	T	G	0.00133	CPOX	-	FALSE
chr1	36068295	T	C	7.99343E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	8823954	G	A	7.64310E-06	ID2	+	FALSE
chr1	10520669	T	C	0.00963	DFFA	-	FALSE	AluSc8	SINE,Alu
chr1	11846092	G	T	0.00877	C1orf167,MTHFR	+,-	FALSE
chr3	194309210	G	A	0.00317	TMEM44-AS1,TMEM44	+,-	FALSE
chr2	37331627	T	C	0.00044		.	FALSE	AluJb	SINE,Alu
chr1	153909069	G	C	5.11201E-05	DENND4B	-	FALSE
chr2	28636644	A	G	0.00918	FOSL2	+	FALSE
chr1	144829799	G	C	2.98942E-05	NBPF20,NBPF9	+	FALSE	L1MC4	SINE,Alu
chr1	9160975	T	C	0.00858		.	FALSE	AluJb	SINE,Alu
chr1	155058663	G	A	0.00300	EFNA3	+	FALSE
chr1	46159809	T	A	0.00761	TMEM69	+	FALSE
chr1	209602381	G	A	0.00075	MIR205HG	+	FALSE	AluJb	SINE,Alu
chr3	184429718	A	G	0.00914	MAGEF1	-	FALSE
chr5	150647719	T	C	0.00112	GM2A	+	FALSE	AluSc	SINE,Alu
chr1	144912233	C	T	0.00066	NBPF20,PDE4DIP	+,-	FALSE
chr19	39981168	A	G	0.00446	TIMM50	+	TRUE	AluJr	SINE,Alu
chr15	41590982	A	G	0.00327	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	28832533	G	A	0.00761	SNHG3,RCC1	+	FALSE
chr7	100271437	C	A	0.00026	GNB2	+	FALSE
chr1	153907287	G	C	0.00122	DENND4B	-	FALSE	(CTG)n	SINE,Alu
chr8	48890109	A	G	8.88178E-16	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	214524129	T	C	0.00052	PTPN14	-	TRUE	AluSx	SINE,Alu
chr4	57327087	A	G	0.00047	PAICS	+	TRUE	AluSx1	SINE,Alu
chr4	17804852	T	C	0.00056	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	33147722	G	A	1.17176E-11	SYNC,RBBP4	+,-	FALSE
chr1	28939803	C	T	1.99823E-11	TAF12	-	FALSE
chr1	27204865	T	C	0.00042		.	FALSE	AluSx	SINE,Alu
chr1	1570921	C	T	0.00411	CDK11B	-	FALSE
chr15	52203664	A	C	0.01000	TMOD3	+	FALSE
chr4	2940434	T	C	1.52137E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr4	2940098	T	C	0.00034	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	3545191	C	T	5.51731E-05	TPRG1L	+	FALSE
chr2	3502625	T	C	0.00800	ADI1	-	FALSE
chr5	37290554	T	C	7.20052E-07		.	FALSE	AluSz	SINE,Alu
chr3	42252924	G	C	0.00079	TRAK1	+	FALSE
chr7	7283569	G	A	0.00032	C1GALT1	+	FALSE	(AT)n	SINE,Alu
chr1	161488401	T	A	0.00622	FCGR2A	+	FALSE
chr6	150047370	T	C	0.00154	NUP43	-	TRUE	AluSc	SINE,Alu
chr2	102484488	A	G	0.00192	MAP4K4	+	FALSE
chr2	31611143	C	T	0.00117	XDH	-	FALSE
chr1	85718132	C	A	0.00738	C1orf52	-	FALSE
chr1	19542679	T	C	0.00575	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr21	44329971	A	G	9.72102E-05		.	FALSE	AluSx3	SINE,Alu
chr2	37331201	T	C	0.00291		.	FALSE	AluSx1	SINE,Alu
chr4	17802819	T	C	0.00747	DCAF16	-	TRUE	AluSz	SINE,Alu
chr2	206987725	T	C	0.00625		.	FALSE	AluJb	SINE,Alu
chr2	86364707	G	T	0.00131	PTCD3	+	FALSE
chr6	74493432	A	C	0.00611	CD109	+	FALSE
chr1	9160989	T	C	0.00495		.	FALSE	AluJb	SINE,Alu
chr2	37327702	T	C	0.00119		.	FALSE
chr10	61548856	T	C	0.00067	CCDC6	-	FALSE
chr1	145512944	A	G	0.00178	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	205111761	A	C	0.00497	DSTYK	-	FALSE
chr1	160966299	T	C	1.46976E-05	F11R	-	TRUE	AluSg	SINE,Alu
chr2	99812311	A	G	0.00016	MRPL30	+	TRUE	AluSx	SINE,Alu
chr4	2841893	A	G	0.00974	SH3BP2	+	TRUE	AluJb	SINE,Alu
chr1	10519936	T	C	0.00354		.	FALSE	AluJr	SINE,Alu
chr1	85785549	T	C	0.00320	DDAH1	-	FALSE
chr8	30536606	T	C	9.30891E-05	GSR	-	TRUE	AluSp	SINE,Alu
chr7	144060286	A	G	0.00674	ARHGEF5	+	FALSE
chr2	68402797	T	A	0.00656	PNO1	+	FALSE
chr2	46414708	G	A	0.00155	PRKCE	+	FALSE
chr1	109801121	C	T	0.00115	CELSR2	+	FALSE
chr1	36752811	C	T	2.19602E-12	THRAP3	+	FALSE
chr15	85190470	G	T	8.70862E-05	WDR73	-	FALSE
chr1	1597403	C	T	0.00033	CDK11B,SLC35E2B	-	FALSE
chr1	31405694	G	A	0.00986	PUM1	-	FALSE
chr1	160966434	T	C	0.00175	F11R	-	TRUE	AluSg	SINE,Alu
chr2	178084651	A	G	1.09207E-09	HNRNPA3	+	FALSE
chr5	149363273	A	G	0.00114	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr1	19543456	T	C	0.00386	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	118167515	C	T	4.87028E-05	FAM46C	+	FALSE
chr1	40219280	T	C	0.00025	PPIE	+	FALSE
chr3	122283289	C	A	0.00072	DTX3L,PARP9	+,-	FALSE
chr1	28661736	A	G	0.00048	MED18	+	TRUE	AluSg	SINE,Alu
chr2	54887287	C	T	7.50624E-05	SPTBN1	+	FALSE
chr8	145159713	G	C	0.00137	MAF1	+	FALSE
chr1	89271574	T	C	3.83690E-05	PKN2	+	FALSE
chr3	5258985	T	C	1.48069E-09	EDEM1	+	FALSE
chr19	46052975	T	C	0.00652	OPA3	-	TRUE	AluSz6	SINE,Alu
chr3	195393406	C	T	0.00690	SDHAP2	+	FALSE
chr3	15112495	T	C	0.00030	RBSN	-	TRUE	AluSq2	SINE,Alu
chr1	33148736	A	G	2.35913E-09	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	39305021	G	T	0.00027	RRAGC	-	FALSE
chr22	22050366	T	C	0.00449	PPIL2	+	FALSE	MER5A	SINE,Alu
chr3	10192826	A	G	0.00037	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	10519048	T	C	0.00637		.	FALSE	AluSx3	SINE,Alu
chr17	5377119	A	T	0.00043	DERL2	-	FALSE	FLAM_C	SINE,Alu
chr1	112266787	G	T	0.00642	FAM212B	-	FALSE
chr3	196670081	C	G	0.00500	NCBP2-AS2	+	FALSE
chr1	16890484	G	C	0.00704	NBPF1	-	FALSE
chr3	176739663	A	G	5.46505E-07	TBL1XR1	-	FALSE
chr1	16929100	C	T	0.00249	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr1	10520117	T	C	0.00078		.	FALSE	AluSx	SINE,Alu
chr1	67874731	T	C	0.00565	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr17	45761109	T	G	0.00018		.	FALSE
chr1	10367058	G	A	0.00328	KIF1B	+	FALSE
chr2	208619675	A	G	0.00012	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr3	49315592	T	C	0.00127	USP4	-	FALSE
chr1	174983207	T	G	0.00681	MRPS14	-	FALSE
chr1	148241546	G	A	0.00416	NBPF8	-	FALSE	U1	SINE,Alu
chr3	195694448	C	T	0.00025	SDHAP1	-	FALSE
chr11	63394018	C	A	0.00103	ATL3	-	FALSE
chr1	45244411	C	A	0.00234	RPS8	+	FALSE
chr1	220231276	T	C	0.00545	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr4	186081819	C	T	3.85218E-06	CFAP97	-	FALSE
chr2	64863970	C	T	9.52027E-09	SERTAD2	-	FALSE
chr3	150261002	C	T	0.00044	SERP1	-	FALSE
chr16	48386442	A	G	0.00824	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr5	115166486	T	C	0.00122	ATG12	-	TRUE	AluJr	SINE,Alu
chr5	180663940	A	G	0.00331	RACK1	-	FALSE
chr1	67874731	T	C	0.00125	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	148558170	T	C	0.00235		.	FALSE	AluJb	SINE,Alu
chr1	200521412	G	A	0.00292	KIF14	-	FALSE
chr2	10194192	T	C	0.00715	KLF11	+	FALSE
chr5	34906662	T	C	4.70471E-07	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	144604425	C	T	0.00269	NBPF20	+	FALSE
chr3	125033835	T	G	0.00385	ZNF148	-	FALSE	AluJb	SINE,Alu
chr1	31905887	A	C	0.00221	SERINC2	+	FALSE
chr3	149237753	G	A	2.17555E-05	WWTR1	-	FALSE	AluSq2	SINE,Alu
chr1	19934839	A	G	0.00605	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	115249239	G	A	1.76451E-06	NRAS	-	FALSE
chr3	152882287	C	T	0.00774	RAP2B	+	FALSE
chr2	25962253	A	T	0.00784	ASXL2	-	FALSE
chr1	15993514	C	T	6.34808E-08		.	FALSE	AluSx4	SINE,Alu
chr8	30536151	T	C	5.90006E-09	GSR	-	TRUE	AluJr	SINE,Alu
chr1	79125148	G	A	0.00203	IFI44	+	FALSE
chr1	158067060	T	A	0.00114	KIRREL	+	FALSE
chr1	10521238	T	C	0.00597	DFFA	-	TRUE	AluY	SINE,Alu
chr4	17802819	T	C	0.00316	DCAF16	-	TRUE	AluSz	SINE,Alu
chr2	37431681	A	G	0.00436	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	145512944	A	G	0.00171	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr16	87864349	C	A	0.00981	SLC7A5	-	FALSE
chr19	53914418	A	G	0.00891	ZNF765	+	TRUE	AluSx	SINE,Alu
chr1	53288894	A	G	8.27269E-06	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr6	99848757	C	T	0.00951	PNISR	-	FALSE	(TCTTTT)n	SINE,Alu
chr1	67451522	A	T	0.00883	MIER1	+	FALSE
chr2	71376999	G	A	0.00546	MPHOSPH10	+	FALSE
chr1	145376020	G	A	0.00478	NBPF20,NBPF10	+	FALSE
chr1	15993013	G	A	1.61862E-10		.	FALSE
chr2	120022385	C	T	0.00184	STEAP3	+	FALSE
chr6	43747963	G	C	0.00274	VEGFA	+	FALSE
chr14	74524944	T	C	0.00567	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr1	567191	C	T	0.00428		.	FALSE
chr1	220231946	T	C	0.00705	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr21	44836048	G	A	0.00542	LOC102724428,SIK1	-	FALSE
chr1	36320634	T	C	0.00190	AGO4	+	FALSE
chr3	69026314	G	A	0.00881	EOGT	-	FALSE	AluSz6	SINE,Alu
chr1	33071146	A	G	0.00899	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	33149399	A	G	0.00148	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr5	53842079	C	T	0.00067	SNX18	+	FALSE
chr5	149823786	C	T	0.00327		.	FALSE
chr7	1199790	G	C	0.00049	ZFAND2A	-	FALSE
chr3	196080528	T	C	0.00700	UBXN7	-	TRUE	AluSx	SINE,Alu
chr9	102744698	G	T	0.00301	ERP44	-	FALSE
chr1	201846626	C	A	0.00429	IPO9	+	FALSE	(CA)n	SINE,Alu
chr4	89181478	T	C	0.00656	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	155695968	A	G	0.00439	DAP3	+	TRUE	AluSp	SINE,Alu
chr12	990912	A	C	0.00244	WNK1	+	FALSE
chr1	28261662	A	G	0.00872	SMPDL3B	+	FALSE
chr1	201846618	C	A	0.00404	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	87573963	T	C	0.00978	HS2ST1	+	FALSE
chr1	79110518	A	G	0.00997	IFI44L	+	FALSE
chr4	2940147	T	C	0.00036	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	19420619	C	G	0.00339	UBR4	-	FALSE
chr15	102516561	T	C	0.00805	WASH3P	+	FALSE
chr1	1595031	T	C	0.00103	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	6694226	C	T	0.00742	THAP3	+	FALSE
chr2	129024313	A	G	0.00612	HS6ST1	-	FALSE
chr1	16909220	T	C	0.00449	NBPF1	-	FALSE
chr19	11256703	T	C	2.95254E-05	SPC24	-	TRUE	AluJr4	SINE,Alu
chr1	36067677	T	C	0.00048	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	28662186	A	G	0.00774	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	16890656	C	T	0.00812	NBPF1	-	FALSE
chr17	19091395	C	T	0.00852		.	FALSE	U3	SINE,Alu
chr12	125511958	A	G	0.00494	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	9328120	A	G	4.35354E-06	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	87328401	A	T	0.00946	SEP15	-	FALSE
chr2	32582399	T	G	0.00147	BIRC6	+	FALSE	(GGC)n	SINE,Alu
chr14	75202544	A	G	3.08187E-07	FCF1	+	TRUE	AluSc	SINE,Alu
chr4	5743512	T	C	0.00210	EVC	+	FALSE
chr12	98942840	A	G	0.00031	TMPO	+	FALSE	AluSc	SINE,Alu
chr5	478174	C	T	0.00392	SLC9A3,LOC100288152	+,-	FALSE
chr1	28826023	A	G	0.00143	PHACTR4	+	FALSE	AluJb	SINE,Alu
chr1	52306075	T	C	0.00135	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	118068558	G	A	0.00644		.	FALSE
chr5	65453894	T	A	0.00211	SREK1	+	FALSE
chr1	67451522	A	T	0.00949	MIER1	+	FALSE
chr18	11852628	C	T	0.00048	GNAL,CHMP1B	+	FALSE
chr14	95555551	C	T	0.00404	DICER1	-	FALSE
chr7	44917316	T	C	0.00564	PURB	-	FALSE	AluSz	SINE,Alu
chr1	16952896	G	A	2.20079E-06	CROCCP2	-	FALSE
chr1	10520672	T	C	0.00584	DFFA	-	TRUE	AluSc8	SINE,Alu
chr7	7918285	G	A	0.00255	UMAD1	+	FALSE
chr2	128603119	T	C	0.00340		.	FALSE	AluSp	SINE,Alu
chr1	180854783	T	C	0.00292	XPR1	+	FALSE
chr4	109551183	T	A	0.00270	RPL34	+	FALSE
chr3	183890868	A	G	5.00274E-08	DVL3	+	FALSE	L2	SINE,Alu
chr1	7833544	T	C	0.00186	VAMP3	+	FALSE
chr1	47142538	G	A	0.00870	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	214524576	T	C	0.00337	PTPN14	-	TRUE	AluSg	SINE,Alu
chr16	10623531	T	C	1.32618E-09	EMP2	-	TRUE	AluSp	SINE,Alu
chr4	89181456	T	C	0.00024	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	145281408	C	T	0.00087	NBPF20,NOTCH2NL	+	FALSE
chr1	15989141	C	G	0.00677		.	FALSE
chr1	207247478	C	T	0.00995	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr2	105964472	C	T	0.00398	C2orf49	+	FALSE	(TTTCTCC)n	SINE,Alu
chr2	232319593	A	C	0.00348	NCL	-	FALSE	A-rich	SINE,Alu
chr2	37331038	T	C	0.00261		.	FALSE	AluSx1	SINE,Alu
chr1	214529740	T	C	0.00375	PTPN14	-	TRUE
chrX	123046741	A	G	0.00169	XIAP	+	TRUE	AluSz	SINE,Alu
chr11	76835290	C	T	0.00011	CAPN5	+	FALSE
chr1	144931330	C	T	0.00066	NBPF20,PDE4DIP	+,-	FALSE
chr1	205719141	C	T	0.00021	NUCKS1	-	FALSE
chr9	128001436	C	T	0.00052	HSPA5	-	FALSE
chr10	15119789	T	C	0.00366	ACBD7	-	TRUE	AluSx1	SINE,Alu
chr3	195415462	G	A	0.00140	LINC00969,SDHAP2	+	FALSE
chr17	42876398	T	C	0.00697	GJC1	-	FALSE	AluSz6	SINE,Alu
chr1	53712570	A	C	0.00277	LRP8	-	FALSE	(CA)n	SINE,Alu
chr1	47844403	C	A	0.00511	CMPK1	+	FALSE
chr7	66007124	T	C	0.00158	GS1-124K5.11	-	TRUE	AluJo	SINE,Alu
chr5	122359502	A	C	0.00707	PPIC	-	FALSE	(AC)n	SINE,Alu
chr7	115898442	G	C	2.36867E-05	TES	+	FALSE	AluSx	SINE,Alu
chr3	45722047	A	G	0.00085	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr3	196556843	G	A	4.00732E-06	PAK2	+	FALSE
chr2	203741654	T	C	0.00611		.	FALSE	AluJr	SINE,Alu
chr1	235492546	T	G	0.00786	GGPS1	+	FALSE
chr1	1573181	C	A	0.00038	CDK11B	-	FALSE
chr5	139931633	C	A	0.00014	SRA1	-	FALSE
chr8	144940798	T	C	0.00255	EPPK1	-	FALSE
chr14	102547384	A	T	0.00403	HSP90AA1	-	FALSE
chr1	182809019	G	A	0.00274	DHX9	+	FALSE
chr3	148748339	G	T	0.00666	HLTF	-	FALSE
chr1	93307479	C	A	0.00019	FAM69A,RPL5	+,-	FALSE
chr2	37331116	T	C	0.00286		.	FALSE	AluSx1	SINE,Alu
chr1	24022437	A	G	0.00342	RPL11	+	FALSE
chr1	25894460	T	A	0.00520	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr2	37331025	T	C	0.00055		.	FALSE	AluSx1	SINE,Alu
chr12	125269475	T	C	0.00184	SCARB1	-	FALSE
chr17	7123232	C	G	0.00250	DLG4,ACADVL	+,-	FALSE
chr1	54637167	T	C	0.00027		.	FALSE
chr1	38174366	G	T	0.00879	CDCA8	+	FALSE
chr1	25644747	T	C	0.00972	RSRP1,RHD	+,-	FALSE	AluSx1	SINE,Alu
chr1	197070442	G	T	0.00468	ASPM	-	FALSE
chr1	109812555	A	C	3.87556E-05	CELSR2	+	FALSE
chr4	119551832	G	A	0.00522	LOC729218	+	FALSE
chr1	145688973	A	G	0.00017	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	180247483	T	C	0.00167		.	FALSE
chr1	569492	T	C	0.00743		.	FALSE
chr21	34731077	A	G	0.00926	IFNAR1	+	TRUE	AluJr	SINE,Alu
chr5	96350710	G	A	0.00302	LNPEP	+	FALSE
chr1	10520725	T	C	0.00234	DFFA	-	TRUE	AluSc8	SINE,Alu
chr7	6501833	A	T	0.00937	KDELR2	-	FALSE
chr1	78414310	C	A	0.00067	FUBP1	-	FALSE
chr8	6615608	C	G	0.00017	AGPAT5	+	FALSE
chr1	25168124	G	C	0.00669	CLIC4	+	FALSE
chr16	66923452	A	G	0.00065	PDP2	+	TRUE	AluSz	SINE,Alu
chr3	195963910	C	T	0.00149		.	FALSE
chr1	36068231	T	C	0.00582	PSMB2	-	TRUE	AluSc	SINE,Alu
chr13	31033317	C	T	0.00254	HMGB1	-	FALSE
chr15	64455123	G	T	1.10189E-06	PPIB	-	FALSE
chr17	49041827	T	C	0.00125	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	148561090	G	A	8.62202E-05	NBPF15	+	FALSE
chr1	45976722	G	T	0.00292	MMACHC,PRDX1	+,-	FALSE
chr2	85772408	G	A	0.00278	GGCX	-	FALSE
chr1	109535116	G	A	0.00013	WDR47	-	FALSE
chr2	26613949	A	G	0.00669	EPT1	+	FALSE
chr1	10520683	T	C	0.00582	DFFA	-	TRUE	AluSc8	SINE,Alu
chr5	170837890	C	A	0.00030		.	FALSE
chr12	121769840	T	C	0.00499	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr3	45722381	A	G	0.00996	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr3	100043289	C	T	0.00049	TBC1D23	+	FALSE
chr2	99772827	A	G	0.00108	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr1	101443431	C	T	0.00013	SLC30A7	+	FALSE	AluSq2	SINE,Alu
chr14	64152514	T	C	1.52259E-06	SGPP1	-	TRUE	(TA)n	SINE,Alu
chr2	37230734	C	T	0.00192	HEATR5B	-	FALSE

RBP	G3BP1
Knock-Method	shRNA
RBP Family	NTF2
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR792CBM
Platform	HiSeq
Pubmed ID	32252787

G3BP1 - Target Gene Network