RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	16945027	T	C	2.31134E-07	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr17	48828384	G	T	0.00283	LUC7L3	+	FALSE
chr6	3021352	T	C	0.00082	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr1	113672569	A	G	0.00674		.	FALSE	AluJb	SINE,Alu
chr1	16889414	T	C	0.00012	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr15	42861705	A	G	0.00518	HAUS2	+	TRUE	AluJb	SINE,Alu
chr1	10043416	G	A	0.00052	NMNAT1	+	FALSE	AluSx3	SINE,Alu
chr1	11347150	C	A	0.00016	UBIAD1	+	FALSE
chr1	67874696	T	C	0.00839	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	1662754	T	C	0.00107	SLC35E2	-	TRUE	AluY	SINE,Alu
chr1	68940885	G	A	0.00500	DEPDC1	-	FALSE	MIR	SINE,Alu
chr1	11979807	C	A	0.00574	KIAA2013	-	FALSE
chr2	37518045	G	C	0.00342	PRKD3	-	FALSE
chr3	100467676	A	T	0.00288	TFG	+	FALSE
chr5	37290413	T	C	0.00467		.	FALSE	AluSz	SINE,Alu
chr3	196077460	G	T	0.00416		.	FALSE
chr1	32661594	C	T	0.00725	TXLNA	+	FALSE	(T)n	SINE,Alu
chr3	156258319	T	C	0.00237	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	28825466	A	G	0.00701	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	142688511	T	C	0.00089		.	FALSE
chr6	138734422	C	T	0.00447	HEBP2	+	FALSE
chr1	94343023	A	G	0.00363	DNTTIP2	-	FALSE
chr2	58316814	A	G	0.00257	VRK2	+	FALSE
chr1	179044181	A	G	1.64117E-06	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	1650832	A	G	0.00263	CDK11B,CDK11A	-	FALSE
chr1	19566382	A	G	0.00513	LOC101927895,EMC1	+,-	FALSE
chr1	10520532	T	C	0.00011		.	FALSE	AluSx1	SINE,Alu
chr1	16768088	G	A	0.00063	NECAP2	+	FALSE
chr1	183155546	G	A	0.00103	LAMC2	+	FALSE
chr3	98517013	T	C	1.12976E-12	DCBLD2	-	FALSE
chr9	131812176	C	T	0.00220	MIGA2	+	FALSE
chr22	39415796	A	T	0.00084		.	FALSE	MER49	SINE,Alu
chr1	214524633	T	A	0.00017	PTPN14	-	FALSE	Alu	SINE,Alu
chr12	56510698	C	G	0.00944	RPL41	+	FALSE
chr1	47844403	C	A	0.00511	CMPK1	+	FALSE
chr17	26672364	C	G	0.00645	TNFAIP1	+	FALSE
chr11	69480680	T	C	0.00252	ORAOV1	-	FALSE	AluSx1	SINE,Alu
chr1	156713558	G	A	8.10199E-06	HDGF	-	FALSE
chr1	16889642	T	C	6.70250E-05	NBPF1	-	TRUE
chr4	42088291	C	A	0.00000	SLC30A9	+	FALSE
chr1	3371371	C	G	0.00367	ARHGEF16	+	FALSE
chr9	125887702	C	T	0.00019	STRBP	-	FALSE
chr3	57199227	A	C	0.00638	IL17RD	-	FALSE
chr1	17298138	A	T	0.00465	CROCC	+	FALSE
chr2	176789478	T	C	0.00219	LNPK	-	TRUE	MSTB1	SINE,Alu
chr1	1431295	T	C	3.55878E-05	ATAD3B	+	FALSE
chr1	11783009	A	G	7.55078E-05		.	FALSE	AluSx	SINE,Alu
chr17	57279323	A	G	0.00159	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	38326704	T	C	0.00328	INPP5B	-	TRUE	AluJr	SINE,Alu
chr3	57613144	T	C	0.00959	DENND6A,PDE12	+,-	FALSE	AluSz	SINE,Alu
chr1	36068227	T	C	0.00398	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	6282400	T	C	0.00809	ICMT	-	TRUE	AluSz	SINE,Alu
chr4	1193026	A	G	0.00471	SPON2,LOC100130872	-	FALSE	AluSp	SINE,Alu
chr5	43574976	T	C	0.00613	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	145689271	A	G	0.00250	NBPF20,NBPF10	+	FALSE
chr14	64951277	T	C	0.00077	ZBTB25	-	TRUE	AluSp	SINE,Alu
chr12	54745612	A	G	0.00070	COPZ1	+	FALSE
chr2	10586904	C	T	0.00041	ODC1,SNORA80B	-	FALSE
chr2	68402152	T	C	0.00794	PNO1	+	FALSE
chr16	48387238	A	G	0.00013	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr1	207247476	T	G	0.00576	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr2	105963597	C	T	0.00898	C2orf49	+	FALSE
chr1	148251875	T	C	0.00436	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	205112911	T	C	0.00161	DSTYK	-	FALSE
chr1	109855150	A	C	0.00251	SORT1	-	FALSE	A-rich	SINE,Alu
chr19	10795968	C	T	0.00700	ILF3	+	FALSE
chr1	27874481	C	A	0.00046	AHDC1	-	FALSE
chr1	10518921	C	T	0.00398		.	FALSE	AluSx3	SINE,Alu
chr12	98942695	A	G	0.00204	TMPO	+	TRUE	AluSc	SINE,Alu
chr6	134492482	A	C	0.00108	SGK1	-	FALSE
chr2	1168781	C	A	0.00650	SNTG2	+	FALSE
chr1	109746728	A	G	0.00171	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr1	46075791	A	G	0.00120	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	36067784	T	C	1.68158E-09	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	11084103	T	A	0.00162	TARDBP	+	FALSE
chr6	29910557	T	A	0.00196		.	FALSE
chr16	29454297	T	C	0.00104	SMG1P6,BOLA2-SMG1P6	-	TRUE	Tigger4a	SINE,Alu
chr1	20945264	A	C	0.00605	CDA	+	FALSE
chr1	38002251	G	C	0.00624	SNIP1	-	FALSE
chr1	6614230	G	A	0.00509	NOL9	-	FALSE
chr1	28906337	A	G	0.00810	SNHG12,SNORA61	-	FALSE
chr2	32539582	A	G	0.00419		.	FALSE	AluSp	SINE,Alu
chr1	111489899	C	A	0.00041	LRIF1	-	FALSE
chr15	31619607	G	A	0.00887	KLF13	+	FALSE
chr1	212277584	G	C	0.00997	DTL	+	FALSE
chr15	85184841	T	C	0.00016	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr8	30536152	T	C	0.00015	GSR	-	TRUE	AluJr	SINE,Alu
chr16	719933	T	C	0.00067	RHOT2	+	FALSE
chr2	37328034	T	C	1.98403E-05		.	FALSE
chr3	15483019	G	T	0.00751	EAF1	+	FALSE
chr1	145511991	A	G	0.00044	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr17	42876730	T	C	0.00024	GJC1	-	TRUE	AluSz6	SINE,Alu
chr5	175816759	T	A	0.00018		.	FALSE
chr10	51612914	T	C	0.00063	TIMM23B,TIMM23	+,-	FALSE
chr1	26143725	A	T	0.00116	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	38423205	A	G	0.00923	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	10368093	C	A	0.00131	KIF1B	+	FALSE
chr1	144931392	G	A	0.00286	NBPF20,PDE4DIP	+,-	FALSE
chr3	42610515	G	A	0.00099	SEC22C	-	FALSE
chr1	118066459	A	G	0.00788	MAN1A2	+	FALSE
chr16	69151495	T	A	0.00304	HAS3	+	FALSE	(T)n	SINE,Alu
chr1	38158211	C	T	0.00113	CDCA8	+	FALSE
chr3	86993604	G	T	0.00195	VGLL3	-	FALSE	AluJo	SINE,Alu
chr5	77655330	T	C	0.00050	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr17	73885939	T	C	0.00612	TRIM65	-	TRUE	AluJr	SINE,Alu
chr1	197475873	G	A	0.00844	DENND1B	-	FALSE
chr2	101622888	T	A	7.56266E-05	RPL31	+	FALSE
chr3	48787757	T	C	0.00605	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr16	31469030	T	C	0.00065		.	FALSE	AluSz	SINE,Alu
chr1	179042719	A	G	2.68049E-06	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	28825418	A	G	0.00525	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	46032311	A	G	0.00043	AKR1A1	+	FALSE
chr1	42884086	G	T	0.00040	RIMKLA	+	FALSE
chr9	127711532	T	C	0.00018	SCAI	-	TRUE	AluSp	SINE,Alu
chr3	195411239	A	C	5.03065E-05	SDHAP2	+	FALSE
chr4	99801986	C	A	0.00687	EIF4E	-	FALSE
chr1	109605648	A	G	0.00033		.	FALSE	AluY	SINE,Alu
chr1	16933625	A	G	0.00536	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr10	101992793	T	C	0.00407	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr16	58054477	T	C	0.00180	USB1	+	FALSE
chr1	16929100	C	T	0.00348	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr1	11783001	A	G	0.00012		.	FALSE	AluSx	SINE,Alu
chr1	10521238	T	C	0.00795	DFFA	-	TRUE	AluY	SINE,Alu
chr2	10908893	A	G	0.00087	ATP6V1C2	+	FALSE
chr1	201350983	C	T	0.00768	LAD1	-	FALSE
chr16	75479331	T	C	0.00725	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr2	45640374	C	A	0.00578	SRBD1	-	FALSE
chr1	33149486	A	G	0.00528	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	179326418	A	G	0.00626	SOAT1	+	TRUE	AluSg	SINE,Alu
chr1	86049392	C	A	0.00322	CYR61	+	FALSE
chr16	28620957	T	C	0.00753	SULT1A1	-	TRUE	AluJr	SINE,Alu
chr4	55147769	C	T	0.00079	PDGFRA	+	FALSE
chr3	10192694	A	G	0.00277	VHL	+	TRUE	AluSx1	SINE,Alu
chr8	141530799	G	A	0.00525		.	FALSE
chr6	42855967	A	G	0.00151	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	111721354	G	T	0.00616	CEPT1	+	FALSE
chr3	119543179	C	A	0.00992	GSK3B	-	FALSE	(CA)n	SINE,Alu
chr1	70904800	G	T	0.00020	CTH	+	FALSE
chr2	204082516	G	A	0.00094	NBEAL1	+	FALSE
chr1	16200163	A	G	0.00078	SPEN	+	FALSE
chr1	1255402	C	G	0.00333	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr3	16357494	G	A	2.87472E-06	RFTN1	-	FALSE
chr5	43298557	C	T	0.00643	HMGCS1	-	FALSE
chr7	129472355	G	C	0.00246	UBE2H	-	FALSE
chr14	53109810	T	C	0.00463	ERO1A	-	TRUE	MER53	SINE,Alu
chr7	99055940	T	C	0.00289	ATP5J2-PTCD1,ATP5J2	-	FALSE
chr1	6583701	T	C	0.00029	NOL9	-	FALSE
chr1	144595935	G	A	0.00636	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	155695960	A	G	1.11424E-05	DAP3	+	TRUE	AluSp	SINE,Alu
chr4	95173779	T	C	0.00771	SMARCAD1	+	FALSE
chr1	149783886	C	T	0.00526	HIST2H2BF	-	FALSE
chr1	247319706	A	T	2.37466E-05	ZNF124	-	FALSE
chr17	42879245	T	C	0.00834	GJC1	-	TRUE	AluSx1	SINE,Alu
chr1	87211940	A	C	0.00164	SH3GLB1	+	FALSE
chr6	134492481	A	C	0.00340	SGK1	-	FALSE
chr1	10043504	A	G	0.00213	NMNAT1	+	FALSE	AluSx3	SINE,Alu
chr5	73932315	T	C	0.00420	ENC1	-	FALSE
chr1	52306075	T	C	0.00135	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr2	201842323	T	C	0.00591	FAM126B	-	TRUE	AluJb	SINE,Alu
chr7	102089261	A	G	0.00028	ORAI2	+	TRUE	AluSq2	SINE,Alu
chr5	139931631	G	C	0.00138	SRA1	-	FALSE
chr4	434456	C	T	0.00553	ABCA11P,ZNF721	-	FALSE	AluSp	SINE,Alu
chr6	42856924	A	G	2.08684E-05	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr10	121437034	G	C	0.00120	BAG3	+	FALSE
chr1	16889624	T	C	0.00614	NBPF1	-	TRUE
chr1	9328242	A	G	0.00116	H6PD	+	TRUE	AluJr	SINE,Alu
chr5	40832548	A	T	0.00048	RPL37	-	FALSE
chr1	19201928	C	T	0.00149	ALDH4A1	-	FALSE
chr6	8014786	T	C	0.00086	BLOC1S5-TXNDC5,BLOC1S5,EEF1E1-BLOC1S5	-	TRUE	AluSz	SINE,Alu
chr3	50686350	T	G	2.12445E-05	MAPKAPK3	+	FALSE
chr1	900720	A	T	0.00065	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	35319580	T	A	0.00988	SMIM12	-	FALSE	AluSg	SINE,Alu
chr2	39210398	A	T	0.00180	SOS1	-	FALSE
chr3	5026730	T	C	0.00488	BHLHE40	+	FALSE
chr1	9740894	C	T	0.00097	PIK3CD,PIK3CD-AS2	+,-	FALSE	MLT1F1	SINE,Alu
chr5	172396725	T	A	0.00014	RPL26L1	+	FALSE
chr1	3729182	T	C	0.00300	CEP104	-	TRUE	AluSx3	SINE,Alu
chr14	53242746	T	C	0.00051	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr14	24661017	G	T	0.00771	TM9SF1	-	FALSE
chr2	86252214	T	C	0.00930	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	1252468	T	C	0.00182	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	78342729	A	G	0.00175	MIGA1	+	TRUE	FRAM	SINE,Alu
chr1	10519148	T	C	0.00214		.	FALSE	AluSx3	SINE,Alu
chr4	10076860	G	A	1.69987E-09	WDR1	-	FALSE
chr2	32532849	A	G	0.00909		.	FALSE	AluSx1	SINE,Alu
chr2	192699639	A	G	0.00017	SDPR	-	FALSE
chr1	172547465	A	G	0.00725	SUCO	+	FALSE
chr12	125514122	A	G	1.22592E-05		.	FALSE	(TA)n	SINE,Alu
chr4	39552022	T	C	0.00015	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr3	181430146	C	A	0.00256	SOX2-OT,SOX2	+	FALSE
chr1	16933628	A	G	0.00430	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr5	125880589	T	C	0.00122	ALDH7A1	-	FALSE
chr3	57882601	C	T	0.00987	SLMAP	+	FALSE
chr1	145689537	A	G	0.00341	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	179042544	A	G	0.00722	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	23636031	T	A	0.00965	HNRNPR	-	FALSE
chr19	3121451	C	T	0.00567	GNA11	+	FALSE
chr2	113287424	T	A	0.00616	TTL	+	FALSE
chr3	122283292	C	G	0.00047	DTX3L,PARP9	+,-	FALSE
chr7	65618870	A	G	0.00097	CRCP	+	TRUE	AluSx3	SINE,Alu
chr1	20238574	C	T	6.32696E-05	OTUD3	+	FALSE
chr1	210006603	C	T	0.00829	DIEXF	+	FALSE
chr8	128944725	G	C	0.00491	PVT1	+	FALSE
chr2	239355561	A	G	0.00343	ASB1	+	FALSE
chr2	70452142	T	G	0.00191	TIA1	-	FALSE
chr11	118471800	T	A	0.00875	ARCN1	+	FALSE	AluSx3	SINE,Alu
chr2	171850174	T	G	3.41223E-05	TLK1	-	FALSE
chr13	45911310	A	T	0.00685	TPT1	-	FALSE
chr5	147793406	A	G	0.00323	FBXO38	+	FALSE
chr1	16932181	C	T	0.00641	NBPF1	-	FALSE
chr1	36067817	T	C	0.00339	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	1650807	T	C	0.00104	CDK11B,CDK11A	-	FALSE
chr1	11084103	T	A	0.00968	TARDBP	+	FALSE
chr1	10517653	T	C	0.00776		.	FALSE	AluSx1	SINE,Alu
chr16	89630630	C	T	0.00296	RPL13	+	FALSE
chr1	179042550	A	G	0.00831	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	204524866	A	G	0.00369	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	204524546	A	G	0.00054	MDM4	+	TRUE	AluY	SINE,Alu
chr1	1252443	T	C	0.00392	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	10518720	T	C	0.00530		.	FALSE	AluSx1	SINE,Alu
chr1	184663537	A	C	0.00256	EDEM3	-	FALSE
chr5	137842895	A	T	0.00038	ETF1	-	FALSE
chr1	148561089	T	C	0.00975	NBPF15	+	FALSE
chr1	211921702	T	C	0.00014	LPGAT1	-	FALSE
chr1	9329289	C	T	0.00303	H6PD	+	FALSE
chr5	180236449	G	C	0.00011	MGAT1	-	FALSE
chr1	46032974	T	C	0.00196	AKR1A1	+	FALSE
chr1	82453022	A	G	0.00532	ADGRL2	+	FALSE
chr6	42048297	A	G	0.00307	TAF8	+	TRUE	AluSq2	SINE,Alu
chr2	201774341	T	C	0.00010		.	FALSE	AluSz	SINE,Alu
chr6	74134673	T	C	0.00340		.	FALSE	AluSz	SINE,Alu
chr2	85772408	G	A	0.00278	GGCX	-	FALSE
chr1	113248365	A	G	0.00252	RHOC	-	FALSE
chr1	220232144	T	C	1.06602E-07	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	100549715	T	A	0.00765	SASS6	-	FALSE
chr17	65334885	T	C	2.77388E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr2	36704035	C	A	0.00012	CRIM1	+	FALSE
chr16	81422951	T	C	0.00074		.	FALSE
chr2	86272758	G	A	0.00023	POLR1A	-	FALSE
chr1	46077268	A	G	0.00311	NASP	+	TRUE	AluSc8	SINE,Alu
chr7	117832138	G	A	0.00885	LSM8	+	FALSE
chr2	61369774	T	C	0.00267	LOC339803	-	TRUE	AluSx	SINE,Alu
chr6	42856118	A	G	0.00743	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	11783889	A	G	0.00746		.	FALSE	AluSq	SINE,Alu
chr8	27592828	G	A	0.00133	CCDC25	-	FALSE
chr4	7762675	C	T	3.92312E-07	AFAP1,AFAP1-AS1	+,-	FALSE
chr3	126752934	T	C	0.00038	PLXNA1	+	FALSE
chr3	133307642	T	G	0.00523	CDV3	+	FALSE	(TT)n	SINE,Alu
chr2	37328027	T	C	0.00026		.	FALSE
chr1	25570566	C	G	0.00326	RSRP1	-	FALSE	Alu	SINE,Alu
chr16	23582262	T	G	0.00101	UBFD1	+	FALSE
chr12	56510707	G	A	0.00056	RPL41	+	FALSE
chr3	4403394	A	G	0.00388	SUMF1	-	FALSE
chr1	53288862	A	G	0.00503	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	153585584	G	A	0.00011	S100A16	-	FALSE
chr1	6704652	C	T	1.57063E-06	DNAJC11	-	FALSE
chr19	19793709	A	G	0.00700	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr8	30536078	T	C	0.00509	GSR	-	FALSE	AluJr	SINE,Alu
chr11	63394018	C	A	0.00103	ATL3	-	FALSE
chr3	37094679	G	A	7.98870E-06	LRRFIP2	-	FALSE
chr1	110913120	C	T	0.00627	SLC16A4	-	FALSE
chr1	53291425	A	G	0.00507	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	151668295	A	C	0.00576	SNX27	+	FALSE
chr6	74133913	T	C	0.00439		.	FALSE	AluY	SINE,Alu
chr14	74526154	T	C	0.00030	BBOF1,ALDH6A1	+,-	FALSE	AluSp	SINE,Alu
chr1	206516261	C	T	0.00228	SRGAP2	+	FALSE
chr1	234744480	G	A	0.00409	IRF2BP2	-	FALSE
chr19	53914411	A	G	8.16883E-05	ZNF765	+	TRUE	AluSx	SINE,Alu
chr8	11701485	T	C	0.00027	CTSB	-	TRUE	AluSx1	SINE,Alu
chr1	28836048	G	A	0.00035	SNHG3,RCC1	+	FALSE	AluSx4	SINE,Alu
chr4	152020779	G	T	0.00925	RPS3A	+	FALSE
chr1	2121118	C	T	0.00234	FAAP20	-	FALSE
chr19	19745479	C	T	0.00175	GMIP	-	FALSE
chr1	53289547	A	G	0.00646	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	109535117	C	T	0.00211	WDR47	-	FALSE
chr10	102308801	G	C	0.00127	HIF1AN	+	FALSE	(GT)n	SINE,Alu
chr1	6282237	T	C	0.00372	ICMT	-	TRUE	AluSz	SINE,Alu
chr14	75202704	A	G	2.33511E-06	FCF1	+	TRUE	AluSc	SINE,Alu
chr14	24884880	T	G	0.00491	NYNRIN	+	FALSE
chr4	38945834	T	C	0.00287	FAM114A1	+	FALSE	AluSc	SINE,Alu
chr1	160966301	T	C	7.77749E-07	F11R	-	TRUE	AluSg	SINE,Alu
chr1	36068281	T	C	0.00201	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	99812815	A	G	0.00245	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	236208773	C	T	0.00722	NID1	-	FALSE
chr2	17897488	T	C	0.00430	SMC6	-	FALSE
chr1	39794147	A	C	9.03176E-05	MACF1	+	FALSE
chr15	41591457	A	G	1.25234E-05	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr2	191224981	G	T	0.00676	INPP1	+	FALSE
chr3	48787046	T	C	0.00699	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr19	49468569	G	T	0.00266	FTL	+	FALSE
chr1	6282400	T	C	0.00385	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	16927419	G	A	0.00493	NBPF1	-	FALSE
chr1	31346203	A	C	0.00050	SDC3	-	FALSE
chr10	101992810	T	C	0.00456	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr2	217366868	A	G	0.00100		.	FALSE	AluSz6	SINE,Alu
chr1	10519936	T	C	0.00607		.	FALSE	AluJr	SINE,Alu
chr9	21863621	C	A	0.00123	MTAP	+	FALSE	AluY	SINE,Alu
chr5	1574319	T	A	0.00158	SDHAP3	-	FALSE
chr17	49042388	T	C	2.65954E-10	SPAG9	-	TRUE	AluJb	SINE,Alu
chr2	69688754	T	C	0.00319	AAK1	-	TRUE	AluSq2	SINE,Alu
chr2	55516897	A	G	1.06852E-06	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr3	9935263	A	G	1.04104E-09	JAGN1	+	FALSE
chr8	12283473	C	T	0.00582	FAM86B2	-	FALSE
chr19	13054905	T	C	0.00324	CALR	+	FALSE	(T)n	SINE,Alu
chr8	62626962	C	T	0.00823	ASPH	-	FALSE
chr2	69330284	G	A	0.00373	ANTXR1	+	FALSE	MER91A	SINE,Alu
chr19	13883548	A	G	0.00566	MRI1	+	TRUE	AluYk3	SINE,Alu
chr1	53711735	G	C	0.00884	LRP8	-	FALSE
chr1	36642420	T	C	0.00162	MAP7D1	+	FALSE
chr3	15114493	T	C	2.42944E-10	RBSN	-	TRUE	AluY	SINE,Alu
chr1	93617546	T	C	0.00026	TMED5	-	FALSE
chr15	41590839	A	G	0.00344	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr12	120898998	A	G	0.00081	GATC	+	TRUE	AluJr	SINE,Alu
chrX	123043142	A	G	0.00045	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	177977067	A	G	0.00030	LOC730102	-	FALSE
chr1	118069696	T	C	0.00922		.	FALSE
chr6	150046734	T	C	0.00248	NUP43	-	FALSE
chr7	5085646	C	T	0.00168	RBAK-RBAKDN,RBAK	+	FALSE
chr9	124095000	T	G	0.00764	GSN	+	FALSE	(TG)n	SINE,Alu
chr7	148700782	G	A	0.00209	PDIA4	-	FALSE
chr1	204525669	A	G	0.00169	MDM4	+	TRUE	AluSz	SINE,Alu
chr3	196082911	T	C	0.00250	UBXN7	-	FALSE
chr17	8378694	A	C	0.00735	MYH10	-	FALSE
chr1	11810674	G	A	0.00279	AGTRAP	+	FALSE
chr6	160113872	A	G	0.00863	SOD2	-	FALSE
chr1	236744712	C	A	0.00054	HEATR1	-	FALSE
chr1	145688973	A	G	8.24717E-05	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	118066459	A	G	0.00729	MAN1A2	+	FALSE
chr5	75469427	G	A	0.00155	SV2C	+	FALSE
chr1	150281011	A	G	0.00016	MRPS21	+	TRUE	AluSz	SINE,Alu
chr1	28661656	A	G	0.00106	MED18	+	TRUE	AluSg	SINE,Alu
chr7	6501829	T	A	0.00124	KDELR2	-	FALSE
chr2	99812988	A	G	0.00700	MRPL30	+	TRUE	AluJb	SINE,Alu
chr2	20401859	A	T	0.00023	SDC1	-	FALSE	(A)n	SINE,Alu
chr1	36067677	T	C	0.00655	PSMB2	-	TRUE	AluSz	SINE,Alu
chr12	56510559	A	G	0.00137	RPL41	+	FALSE
chr1	33148736	A	G	0.00525	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr2	128603119	T	C	0.00340		.	FALSE	AluSp	SINE,Alu
chr9	33466219	A	C	0.00148	NOL6	-	FALSE
chr1	1344749	A	G	3.37361E-05		.	FALSE	AluSx1	SINE,Alu
chr2	202032107	A	G	0.00401	CFLAR	+	TRUE	AluJo	SINE,Alu
chr2	37431604	A	G	0.00876	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr2	203741654	T	C	0.00611		.	FALSE	AluJr	SINE,Alu
chr12	64844149	A	G	0.00456		.	FALSE	AluJr4	SINE,Alu
chr1	93828011	G	T	0.00464	DR1	+	FALSE
chr3	156258230	T	C	0.00011	SSR3	-	TRUE	AluYk3	SINE,Alu
chr2	197001673	T	C	0.00043	STK17B	-	FALSE
chr3	180694878	A	T	0.00431	FXR1	+	FALSE	(T)n	SINE,Alu
chr1	179312752	C	T	0.00106	SOAT1	+	FALSE
chr17	15434181	T	C	0.00011	TVP23C-CDRT4,TVP23C	-	TRUE	AluJb	SINE,Alu
chr1	2434523	T	C	9.26798E-05	PLCH2	+	FALSE
chr11	118915753	T	C	8.93388E-07	HYOU1	-	FALSE
chr14	21928940	T	C	0.00212	RAB2B	-	TRUE	AluSp	SINE,Alu
chr4	24578019	G	A	0.00000	DHX15	-	FALSE
chr5	98128999	G	A	0.00663	RGMB	+	FALSE
chr7	26708303	G	T	0.00095	SKAP2	-	FALSE	AluSx3	SINE,Alu
chr1	100440553	A	G	9.79324E-05	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	6582161	T	C	0.00697	NOL9	-	TRUE	AluSq4	SINE,Alu
chr2	191745647	C	T	2.95764E-05	GLS	+	FALSE
chr1	25890189	A	G	0.00961	LDLRAP1	+	FALSE
chr1	36068237	T	C	0.00812	PSMB2	-	TRUE	AluSc	SINE,Alu
chr8	145159706	C	G	0.00561	MAF1	+	FALSE
chr5	56177850	A	T	0.00856	MAP3K1	+	FALSE	(CAA)n	SINE,Alu
chr3	44791553	T	C	1.10852E-07	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	25894460	T	A	0.00520	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	43916642	T	C	0.00748	SZT2	+	FALSE	MIR3	SINE,Alu
chr1	63881552	C	T	0.00293	ALG6	+	FALSE
chr7	16823610	T	G	0.00765	TSPAN13	+	FALSE
chr1	156499969	T	C	8.53229E-06	IQGAP3	-	FALSE
chr15	33064148	T	C	1.59288E-05	FMN1	-	FALSE
chr1	46077218	A	G	0.00543	NASP	+	TRUE	AluSc8	SINE,Alu
chr3	5257981	T	A	3.55991E-06	EDEM1	+	FALSE	(ATTTT)n	SINE,Alu
chr1	16889864	C	A	0.00063	NBPF1	-	FALSE
chr1	20977533	G	C	0.00234	PINK1,PINK1-AS	+,-	FALSE
chr1	16889502	T	C	0.00178	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr2	7036682	A	T	0.00335	RSAD2	+	FALSE
chr4	120982045	T	C	0.00293	MAD2L1	-	FALSE
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr5	17276742	G	A	0.00320	BASP1	+	FALSE
chr1	169293721	G	A	0.00978	NME7	-	FALSE
chr17	79838088	T	C	6.81311E-05		.	FALSE	AluSx	SINE,Alu
chr7	152551581	T	A	0.00313	ACTR3B	+	FALSE
chr1	160965379	T	C	0.00477	F11R	-	TRUE	AluSc	SINE,Alu
chr5	179041779	C	T	0.00430	HNRNPH1	-	FALSE
chr2	25042625	C	G	0.00766	CENPO,ADCY3	+,-	FALSE
chr1	146650289	C	T	0.00024	PDIA3P1	+	FALSE
chr1	22419433	T	G	0.00200	CDC42	+	FALSE
chr17	76117147	G	A	0.00606	TMC6	-	FALSE
chr4	1387223	A	G	0.00155	CRIPAK	+	TRUE	AluSx	SINE,Alu
chr1	6283264	T	C	0.00127	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	113511408	A	G	0.00738		.	FALSE	AluY	SINE,Alu
chr1	35644504	A	T	0.00242	SFPQ	-	FALSE
chr1	109239335	G	T	0.00011	PRPF38B	+	FALSE
chr20	25428308	A	G	0.00185	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	16944809	G	C	0.00072	CROCCP2	-	FALSE
chr1	45671434	G	C	0.00819	ZSWIM5	-	FALSE
chr1	17085028	G	A	0.00803	MST1L,LOC102724562	-	FALSE
chr3	10192838	A	G	1.36876E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr17	57281069	A	G	0.00278	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	33148225	A	G	0.00031	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	144606838	A	G	0.00025	NBPF20	+	FALSE
chr7	44053729	T	C	0.00316	POLR2J4	-	FALSE	AluSg	SINE,Alu
chr3	46007825	T	C	4.58354E-06	FYCO1	-	FALSE
chr17	4928967	T	G	0.00921	KIF1C	+	FALSE	AluY	SINE,Alu
chr1	36531781	G	A	0.00288		.	FALSE
chr1	27205871	G	T	0.00931		.	FALSE
chr1	50906945	C	T	0.00178	FAF1	-	FALSE
chr8	145150065	G	C	0.00585	CYC1	+	FALSE
chr1	28826118	A	G	0.00039	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr4	89181451	T	C	8.32748E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr5	125961447	A	G	0.00563	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	46117185	C	T	0.00714	GPBP1L1	-	FALSE
chr5	145493224	A	T	0.00251	LARS	-	FALSE
chr1	10519888	T	C	0.00986		.	FALSE	AluJr	SINE,Alu
chr2	202030111	A	G	0.00983	CFLAR	+	TRUE	AluSx1	SINE,Alu
chr3	10192720	A	G	0.00110	VHL	+	TRUE	AluSx1	SINE,Alu
chr6	42856954	A	G	0.00037	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr5	74669972	C	T	0.00113	COL4A3BP	-	FALSE
chr4	1066073	T	A	0.00387	RNF212	-	FALSE	L1MC1	SINE,Alu
chr17	42113064	A	G	0.00014	LSM12	-	FALSE	(A)n	SINE,Alu
chr17	7482018	C	A	9.29146E-05	SENP3-EIF4A1,EIF4A1	+	FALSE
chr1	173836602	G	A	0.00886	GAS5	-	FALSE	AluSx	SINE,Alu
chr1	6583138	T	C	0.00010	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	19238562	G	A	3.36880E-06	IFFO2	-	FALSE
chr15	90820095	A	G	6.27827E-07		.	FALSE	AluY	SINE,Alu
chr11	125763746	C	G	0.00166	HYLS1,PUS3	+,-	FALSE
chr1	33146255	C	A	0.00182	SYNC,RBBP4	+,-	FALSE
chr1	79125148	G	A	0.00203	IFI44	+	FALSE
chr1	10421878	A	G	7.26627E-05	KIF1B	+	FALSE
chr1	16889620	T	C	0.00884	NBPF1	-	FALSE
chr12	66546100	A	G	0.00849	TMBIM4	-	FALSE
chr22	31744347	A	G	0.00113	LINC01521	+	TRUE	AluSp	SINE,Alu
chr2	227597207	T	C	0.00209	IRS1	-	FALSE	(TA)n	SINE,Alu
chr19	16663345	T	C	0.00304	SLC35E1	-	TRUE	AluSg	SINE,Alu
chr20	43343908	G	A	9.03009E-05	KCNK15-AS1,WISP2	+,-	FALSE	(GC)n	SINE,Alu
chr17	8286136	T	A	0.00706	RPL26	-	FALSE
chr1	6583457	T	C	0.00233	NOL9	-	TRUE	AluSq	SINE,Alu
chr2	128950548	A	G	0.00589	UGGT1	+	TRUE	AluSc	SINE,Alu
chr2	37230734	C	T	0.00025	HEATR5B	-	FALSE
chr1	2522392	G	A	0.00227	FAM213B,MMEL1	+,-	FALSE
chr2	158169499	A	G	0.00119	GALNT5	+	FALSE
chr2	55255313	T	A	0.00675	RTN4	-	FALSE
chr20	43707759	A	G	0.00090	STK4	+	TRUE	AluJb	SINE,Alu
chr1	10520532	T	C	0.00142		.	FALSE	AluSx1	SINE,Alu
chr1	27992800	C	A	5.71645E-05	IFI6	-	FALSE	FAM	SINE,Alu
chr19	11257634	T	C	0.00823	SPC24	-	TRUE	AluSp	SINE,Alu
chr1	151966348	C	T	0.00511	S100A10	-	FALSE
chr3	15113657	T	C	2.06253E-05	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	43996594	T	C	0.00836	PTPRF	+	FALSE	(CGGCTC)n	SINE,Alu
chr3	169807548	T	C	0.00665	PHC3	-	TRUE	AluSx1	SINE,Alu
chr1	20977221	A	T	0.00116	PINK1,PINK1-AS	+,-	FALSE
chr1	45244053	A	G	0.00621	RPS8	+	FALSE
chr3	196080531	T	C	0.00952	UBXN7	-	TRUE	AluSx	SINE,Alu
chr16	68962	C	T	0.00852		.	FALSE
chr3	197611291	A	G	0.00095		.	FALSE	AluSx1	SINE,Alu
chr1	6583592	T	C	0.00939	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	145369480	A	G	7.08400E-07	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr2	37327702	T	C	0.00519		.	FALSE
chr1	114443606	A	G	0.00014	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr2	187544223	T	G	0.00254	ITGAV	+	FALSE
chr2	37330507	T	C	9.86666E-05		.	FALSE	AluSq2	SINE,Alu
chr19	58357211	A	G	0.00041	ZNF587B	+	TRUE	AluSx3	SINE,Alu
chr7	6064012	T	C	0.00240	EIF2AK1	-	FALSE
chr1	20976174	T	C	0.00103	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr6	25600772	A	G	0.00269	CARMIL1	+	FALSE
chr5	149823795	A	T	0.00261	RPS14	-	FALSE
chr18	10691357	G	A	0.00082	PIEZO2	-	FALSE
chr10	115526177	A	G	0.00237	PLEKHS1	+	FALSE
chr10	75008815	T	C	0.00309	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr3	45722055	A	G	0.00835	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr19	29703961	A	C	0.00376	UQCRFS1	-	FALSE
chr1	26608014	C	A	0.00328		.	FALSE
chr1	235492546	T	G	0.00786	GGPS1	+	FALSE
chr3	148748257	C	G	0.00989	HLTF	-	FALSE
chr1	11084104	G	A	0.00116	TARDBP	+	FALSE
chr1	121134169	A	T	0.00660	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr2	232319612	A	T	5.77221E-05	NCL	-	FALSE
chr4	57327082	A	G	0.00834	PAICS	+	TRUE	AluSx1	SINE,Alu
chr6	33268621	T	C	0.00367		.	FALSE	AluY	SINE,Alu
chr1	145511983	A	G	0.00596	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	74442407	A	G	0.00384	MTHFD2	+	FALSE
chr16	89623623	T	C	0.00740	SPG7	+	FALSE
chr15	85190470	G	T	8.70862E-05	WDR73	-	FALSE
chr3	152882287	C	T	0.00774	RAP2B	+	FALSE
chr3	15094061	G	A	0.00188	MRPS25	-	FALSE
chr5	81571876	A	T	0.00013	RPS23	-	FALSE
chrX	77083723	T	C	0.00163	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr2	217366444	A	G	2.40359E-05		.	FALSE
chr2	65496187	G	A	0.00103	ACTR2	+	FALSE
chr1	145511929	A	G	0.00023	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	167168093	C	T	0.00789	SCN9A	-	FALSE

RBP	BOP1
Knock-Method	shRNA
RBP Family	BOP1NT
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR775TMW
Platform	HiSeq
Pubmed ID	32252787

BOP1 - Target Gene Network