RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	246829742	T	C	0.00037	CNST	+	FALSE	(TGTG)n	SINE,Alu
chr6	157405930	G	A	0.00077	ARID1B	+	FALSE
chr1	182569318	G	T	0.00829	RGS16	-	FALSE
chr5	130536842	A	G	0.00016	LYRM7	+	TRUE	AluSx4	SINE,Alu
chr18	47919174	A	G	0.00820	SKA1	+	TRUE	AluYk4	SINE,Alu
chr2	36776056	T	A	0.00030	CRIM1	+	FALSE
chr5	68850922	G	C	0.00323	OCLN	+	FALSE	AluSx4	SINE,Alu
chr1	59120961	G	A	0.00383	MYSM1	-	FALSE
chr2	161130521	G	A	0.00454	RBMS1	-	FALSE
chr1	145689611	C	A	0.00104	NBPF20,NBPF10	+	FALSE	AluSg	SINE,Alu
chr8	56985609	G	T	0.00134	RPS20	-	FALSE
chr1	205686523	G	T	2.43057E-05	NUCKS1	-	FALSE
chr2	61150192	C	A	0.00436	REL	+	FALSE	AluSz6	SINE,Alu
chr1	169101273	T	G	0.00522	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr19	42375627	A	G	0.00058		.	FALSE	AluSx	SINE,Alu
chr2	206987228	T	C	0.00052		.	FALSE	AluSx	SINE,Alu
chr1	149576483	G	A	0.00323	LINC00623,LINC00869,LOC103091866	+	FALSE
chr17	263417	C	T	0.00675	LOC105371430,C17orf97	+,-	FALSE
chr5	49692633	T	G	0.00808	EMB	-	FALSE
chr7	100031497	T	G	0.00119	MEPCE	+	FALSE
chr1	100658578	G	A	0.00030	DBT	-	FALSE
chr1	201846675	C	T	0.00145	IPO9	+	FALSE
chr6	42856954	A	G	0.00037	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr14	23795219	C	T	0.00201	BCL2L2-PABPN1,PABPN1	+	FALSE
chr1	1684346	G	C	0.00504	NADK	-	FALSE
chr2	201253956	A	G	1.78964E-05	SPATS2L	+	FALSE
chr1	4834606	T	C	0.00647	AJAP1	+	FALSE
chr17	42880190	T	C	0.00284	GJC1	-	TRUE	AluJb	SINE,Alu
chr3	44791512	T	C	1.32337E-05	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr2	178406767	A	T	0.00416	AGPS	+	FALSE
chr1	28904397	C	G	0.00125	TRNAU1AP	+	FALSE
chr7	44917406	T	C	0.00021	PURB	-	TRUE	AluSz	SINE,Alu
chrM	2619	A	T	0.00012	RNR2	+	FALSE	LSU-rRNA_Hsa	SINE,Alu
chr1	145116027	T	C	1.71852E-07	NBPF20,SEC22B	+	FALSE
chr10	121437034	G	C	0.00120	BAG3	+	FALSE
chr1	19586501	A	G	0.00055	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	89447720	G	A	0.00521	KYAT3,RBMXL1	-	FALSE
chr1	100361925	G	A	0.00181	AGL	+	FALSE
chr3	10192704	A	G	0.00402	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	143638993	C	G	0.00016	KYNU	+	FALSE
chr1	87213190	A	C	0.00054	SH3GLB1	+	FALSE
chr15	63363386	G	T	0.00116	TPM1	+	FALSE
chr1	145281656	A	T	0.00839	NBPF20,NOTCH2NL	+	FALSE
chr1	27634734	G	A	0.00978	WDTC1	+	FALSE
chr1	116609833	G	A	0.00773	SLC22A15	+	FALSE
chr1	10519048	T	C	0.00089		.	FALSE	AluSx3	SINE,Alu
chr12	124146094	A	G	2.86040E-06	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr1	53712727	C	T	0.00313	LRP8	-	FALSE
chr3	15296358	A	T	4.17447E-06	SH3BP5,SH3BP5-AS1	+,-	FALSE
chr2	201253956	A	G	0.00071	SPATS2L	+	FALSE
chr2	37328075	T	C	0.00335		.	FALSE
chr17	60522250	A	G	0.00267	METTL2A	+	FALSE
chr2	85773494	T	C	0.00099	GGCX	-	TRUE	AluY	SINE,Alu
chr1	138266	C	T	0.00802	LOC729737	-	FALSE
chr1	179326588	A	G	0.00563	SOAT1	+	TRUE	AluSg	SINE,Alu
chr4	84525986	G	T	0.00081	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr8	92075904	T	C	0.00242	OTUD6B-AS1	-	FALSE	LTR67B	SINE,Alu
chr3	122293773	A	T	0.00852	DTX3L	+	FALSE
chr1	13942885	C	A	0.00038	PDPN	+	FALSE
chr1	93804952	G	A	0.00421	CCDC18-AS1	-	FALSE
chr1	1255402	C	G	0.00785	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr3	141164940	C	A	0.00194	ZBTB38	+	FALSE
chr2	223807974	A	T	0.00593	ACSL3	+	FALSE
chr2	234749258	T	C	0.00710	HJURP	-	FALSE
chr1	10519932	T	C	0.00012		.	FALSE	AluJr	SINE,Alu
chr17	73885248	T	C	0.00017	TRIM65	-	TRUE	AluSg	SINE,Alu
chr1	28825337	A	G	0.00099	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	9331101	A	G	0.00026	H6PD	+	FALSE	AluSx	SINE,Alu
chr2	128951941	A	G	0.00624	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	28833494	G	A	0.00901	SNHG3,RCC1	+	FALSE
chr1	32641383	C	A	0.00112	KPNA6	+	FALSE	AluSx3	SINE,Alu
chr1	77556766	T	A	0.00576	PIGK	-	FALSE
chr1	6283448	T	C	0.00827	ICMT	-	TRUE	AluSx3	SINE,Alu
chr4	185549875	A	T	0.00616	CASP3	-	FALSE
chr1	45976722	G	T	0.00292	MMACHC,PRDX1	+,-	FALSE
chr11	65404868	T	G	0.00022	PCNX3	+	FALSE
chr12	124146073	A	G	0.00085	GTF2H3	+	FALSE	AluSx4	SINE,Alu
chr1	1594498	C	T	0.00024	CDK11B,SLC35E2B	-	FALSE
chr2	32535692	A	G	0.00236		.	FALSE	AluJb	SINE,Alu
chr1	67451522	A	T	0.00949	MIER1	+	FALSE
chr1	53289892	A	G	0.00505	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	210025751	G	A	4.42687E-05	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr1	118472402	T	G	0.00342	WDR3	+	FALSE
chr1	207942535	A	G	0.00102	CD46	+	TRUE	AluSg4	SINE,Alu
chr2	37331929	T	C	0.00518		.	FALSE	L1MC4	SINE,Alu
chr3	183209065	T	C	0.00576	KLHL6	-	TRUE	AluSq	SINE,Alu
chr1	158066172	C	T	0.00616	KIRREL	+	FALSE
chr1	3806074	G	A	0.00809	C1orf174	-	FALSE	AluSp	SINE,Alu
chr2	99812289	A	G	0.00282	MRPL30	+	TRUE	AluSx	SINE,Alu
chr9	70483778	A	T	0.00026	CBWD5	-	FALSE
chr4	57326291	A	G	0.00549	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	17345245	C	T	0.00812	SDHB	-	FALSE
chr1	78029905	T	A	0.00256	ZZZ3	-	FALSE
chr1	53712570	A	C	0.00277	LRP8	-	FALSE	(CA)n	SINE,Alu
chr1	10519912	T	C	5.10285E-06		.	FALSE	AluJr	SINE,Alu
chr1	10517672	T	C	0.00070		.	FALSE	AluSx1	SINE,Alu
chr8	30536078	T	C	0.00509	GSR	-	FALSE	AluJr	SINE,Alu
chr16	88891240	C	A	0.00826	GALNS	-	FALSE
chr6	11577085	C	T	1.34362E-05	TMEM170B	+	FALSE
chr1	101443701	A	G	0.00749	SLC30A7	+	FALSE
chr2	20449605	C	T	0.00871	PUM2	-	FALSE
chrX	2825114	T	C	0.00738	ARSD	-	TRUE	AluSx1	SINE,Alu
chr17	57281021	A	G	9.11421E-05	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	38174185	G	T	0.00020	CDCA8	+	FALSE
chr1	25655853	A	G	0.00147	RSRP1,RHD	+,-	FALSE	AluSz	SINE,Alu
chr2	206983093	T	C	0.00118		.	FALSE	AluJb	SINE,Alu
chr1	179813613	T	C	0.00595	TOR1AIP2	-	FALSE
chr10	13320126	T	A	0.00830	PHYH	-	FALSE
chr1	46076533	A	G	1.88265E-05	NASP	+	TRUE	AluSx	SINE,Alu
chr2	55516911	A	G	0.00719	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	10520487	T	C	0.00638		.	FALSE	AluSx1	SINE,Alu
chr1	1169973	G	A	0.00783	B3GALT6	+	FALSE
chr2	196600548	G	T	0.00036	SLC39A10	+	FALSE
chr2	37331525	T	C	0.00020		.	FALSE	AluJb	SINE,Alu
chr1	10517653	T	C	0.00256		.	FALSE	AluSx1	SINE,Alu
chr1	10517538	T	C	0.00840		.	FALSE	AluSx1	SINE,Alu
chr1	16889414	T	C	0.00679	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	149816373	G	A	0.00364		.	FALSE	(A)n	SINE,Alu
chr1	9161218	T	C	0.00581		.	FALSE	AluSx	SINE,Alu
chr7	156763172	A	G	0.00874	NOM1	+	TRUE	AluSx	SINE,Alu
chr19	19791270	A	G	0.00732	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr2	10586904	C	T	0.00041	ODC1,SNORA80B	-	FALSE
chr4	39551087	T	C	0.00263	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr9	85861561	C	T	0.00287	FRMD3	-	FALSE	(TC)n	SINE,Alu
chr4	73923043	T	C	0.00236	COX18	-	TRUE	AluSz	SINE,Alu
chr1	27202844	T	C	0.00076		.	FALSE	AluSq2	SINE,Alu
chr1	148010952	C	T	0.00393	NBPF8	-	FALSE
chr2	38971644	T	G	0.00021	SRSF7	-	FALSE
chr1	12071680	A	G	5.54475E-07	MFN2	+	FALSE
chr3	10193743	T	C	0.00456	VHL	+	FALSE	AluJr	SINE,Alu
chr5	157184013	A	G	0.00631	LSM11	+	TRUE	AluY	SINE,Alu
chr2	106510201	C	A	0.00638	NCK2	+	FALSE
chr14	67852040	A	G	4.57409E-05	EIF2S1	+	TRUE	AluJb	SINE,Alu
chr12	69237077	A	G	0.00445	MDM2	+	TRUE	(GA)n	SINE,Alu
chr4	42091668	A	G	0.00430		.	FALSE	AluSp	SINE,Alu
chr2	85773689	T	C	0.00104	GGCX	-	TRUE	AluSx1	SINE,Alu
chr3	53263333	G	A	0.00329	TKT	-	FALSE
chr8	17087341	C	A	0.00197	CNOT7	-	FALSE
chr6	74134008	T	C	0.00337		.	FALSE	AluY	SINE,Alu
chr3	124732407	T	G	0.00405	HEG1	-	FALSE
chr5	125961554	A	G	0.00355	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	144594232	C	T	2.29859E-05	NBPF20	+	FALSE
chr19	7084638	A	G	0.00508	ZNF557	+	TRUE	AluJb	SINE,Alu
chr12	123253723	A	G	0.00371	DENR	+	TRUE	(AT)n	SINE,Alu
chr1	181026558	G	A	0.00217	MR1	+	FALSE
chr19	4428790	A	T	0.00000	CHAF1A	+	FALSE
chr1	53288924	A	G	1.39497E-05	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr6	3022544	T	C	0.00440	HTATSF1P2	-	TRUE	AluJr	SINE,Alu
chr12	123640853	C	G	0.00667		.	FALSE
chr17	65334986	T	C	1.42836E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	100549600	G	T	0.00181	SASS6	-	FALSE
chr16	81064560	A	G	0.00014	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	65897981	G	A	0.00071	LEPR,LEPROT	+	FALSE
chr6	13790931	T	C	0.00948	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr5	53840199	G	T	0.00857	SNX18	+	FALSE
chr1	6283264	T	C	0.00073	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	74334790	A	G	0.00870	TET3	+	FALSE
chr1	11150682	C	T	3.65592E-05	EXOSC10	-	FALSE
chr2	85772406	G	A	0.00278	GGCX	-	FALSE
chr2	3627302	A	T	0.00021	RPS7	+	FALSE
chr3	48784500	T	A	0.00264	PRKAR2A	-	FALSE	(T)n	SINE,Alu
chr3	124948047	C	G	0.00670	ZNF148	-	FALSE
chr1	145513094	A	G	0.00633	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	67896025	G	A	5.77574E-06	SERBP1	-	FALSE
chr2	128601464	T	C	0.00161		.	FALSE	AluJr	SINE,Alu
chr3	10192753	A	G	0.00069	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	100491475	A	G	0.00508	SLC35A3	+	FALSE
chr1	161088583	T	G	0.00822	NIT1	+	FALSE
chrX	3523058	A	C	0.00019	PRKX	-	FALSE	(AC)n	SINE,Alu
chr5	90074268	G	A	0.00240	ADGRV1	+	FALSE
chr16	2821024	C	T	0.00406	SRRM2	+	FALSE
chr1	145513112	A	G	0.00080	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	172410967	G	A	1.85684E-05	C1orf105,PIGC	+,-	FALSE
chr2	181737842	C	T	0.00350	SCHLAP1	+	FALSE
chr2	55462751	T	A	0.00613	RPS27A	+	FALSE
chr3	14986098	T	C	0.00996	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	10043053	A	G	0.00042	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	36068231	T	C	9.19439E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	204524846	A	G	0.00940	MDM4	+	TRUE	AluSx	SINE,Alu
chr2	174090630	C	A	0.00025	ZAK,MLK7-AS1	+,-	FALSE
chr2	208619320	A	G	0.00339	CCNYL1	+	FALSE	EutTc1-N1	SINE,Alu
chr4	169299528	T	C	0.00745	DDX60L	-	FALSE
chr3	17201871	T	C	0.00626	TBC1D5	-	FALSE
chr8	124027562	C	T	0.00674	DERL1	-	FALSE
chr1	182568729	C	G	0.00012	RGS16	-	FALSE
chr1	33148691	A	G	2.12433E-06	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	246829616	T	C	0.00139	CNST	+	FALSE
chr1	10518052	T	C	0.00179		.	FALSE	AluJr	SINE,Alu
chr2	37330611	T	C	0.00249		.	FALSE	AluSq2	SINE,Alu
chr1	45244411	C	A	0.00149	RPS8	+	FALSE
chr1	151092839	A	G	0.00135	GABPB2	+	TRUE	AluSp	SINE,Alu
chr7	20178562	T	C	1.84789E-06	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	38326661	T	C	0.00023	INPP5B	-	TRUE	AluJr	SINE,Alu
chr7	6064010	C	A	0.00304	EIF2AK1	-	FALSE
chr9	132266624	A	G	5.52448E-06	LINC00963	+	TRUE	AluSx	SINE,Alu
chr3	66430374	A	T	0.00275	LRIG1	-	FALSE
chr1	28825418	A	G	0.00961	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	19542401	T	C	0.00052	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr14	53242746	T	C	0.00051	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr5	130540369	C	A	0.00126	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr1	32799438	A	T	0.00485	MARCKSL1	-	FALSE
chr1	45241211	C	T	0.00947		.	FALSE
chr2	189877303	G	T	0.00824	COL3A1	+	FALSE
chr19	33470874	A	G	0.00119	RHPN2	-	FALSE
chr6	26096636	A	G	0.00531		.	FALSE	AluSg	SINE,Alu
chr3	12940377	G	T	0.00878	IQSEC1	-	FALSE
chr1	27662235	G	T	0.00766	TMEM222	+	FALSE
chr1	20978324	T	G	0.00153	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr2	23865260	T	C	0.00262	KLHL29	+	FALSE
chr19	57804362	G	A	0.00191	ZNF460	+	FALSE
chr1	154317153	C	T	0.00483	ATP8B2	+	FALSE
chr5	37290400	T	C	0.00085		.	FALSE	AluSz	SINE,Alu
chr4	57326236	A	G	0.00699	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	11190646	G	A	0.00369	MTOR	-	FALSE
chr6	13790888	T	C	0.00442	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr3	100467676	A	T	0.00067	TFG	+	FALSE
chr5	36687341	T	C	0.00930	SLC1A3	+	FALSE
chr1	145293515	A	G	4.09953E-06	NBPF20,NBPF10	+	FALSE
chr20	57603730	A	T	0.00101		.	FALSE
chr7	4802065	C	T	0.00279	FOXK1	+	FALSE
chr1	10519910	T	C	7.27344E-07		.	FALSE	AluJr	SINE,Alu
chr1	237065326	C	T	0.00376	MTR	+	FALSE
chr2	9629953	C	A	0.00105	ADAM17	-	FALSE
chr2	208620129	A	G	0.00167	CCNYL1	+	TRUE	EutTc1-N1	SINE,Alu
chr7	299850	G	T	1.36182E-06	FAM20C	+	FALSE
chr1	54691921	G	A	0.00032	SSBP3	-	FALSE
chrX	133930368	T	G	0.00126	FAM122B	-	FALSE	G-rich	SINE,Alu
chr3	50327662	G	A	0.00707	IFRD2	-	FALSE
chr16	22297295	A	G	0.00749	EEF2K	+	TRUE	AluJr	SINE,Alu
chr1	101444791	C	T	0.00268	SLC30A7	+	FALSE
chr1	115249239	G	A	1.76451E-06	NRAS	-	FALSE
chr1	6948076	C	T	0.00221	CAMTA1	+	FALSE	L2a	SINE,Alu
chr3	28390351	A	G	1.14010E-06	AZI2	-	FALSE
chr1	10521172	T	C	1.01590E-06	DFFA	-	TRUE	AluY	SINE,Alu
chr17	74710572	T	C	0.00594	JMJD6	-	FALSE
chr2	202031356	C	T	0.00247	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr1	27205359	T	C	3.58613E-05		.	FALSE	AluSc	SINE,Alu
chr1	33139061	T	C	0.00079	RBBP4	+	FALSE	AluSx3	SINE,Alu
chr5	149829071	T	C	0.00360	RPS14	-	FALSE
chr1	114307293	A	G	0.00499	RSBN1	-	FALSE
chr1	16934178	C	T	0.00382	NBPF1	-	FALSE
chr3	148863151	A	G	0.00062	HPS3	+	FALSE
chr1	224380498	A	G	6.58460E-05	DEGS1	+	TRUE	AluSx	SINE,Alu
chr17	263367	A	T	2.02495E-05	LOC105371430,C17orf97	+,-	FALSE
chr1	32742441	G	A	2.50972E-10	LCK	+	FALSE
chr1	33068221	A	G	0.00448	ZBTB8A	+	TRUE	AluY	SINE,Alu
chr1	47142538	G	A	7.23026E-06	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr6	57034840	T	G	0.00581	ZNF451,LOC101927211	+,-	FALSE
chr2	208466270	A	G	0.00713	CREB1,METTL21A	+,-	FALSE
chr1	10519200	T	C	0.00059		.	FALSE	AluSx3	SINE,Alu
chr1	45975269	A	G	0.00827	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr4	139088295	C	T	0.00537	SLC7A11-AS1,SLC7A11	+,-	FALSE
chr1	10517290	T	C	0.00366		.	FALSE	AluJr	SINE,Alu
chr1	16891365	G	A	0.00475	NBPF1	-	FALSE
chr14	95555551	C	T	0.00404	DICER1	-	FALSE
chr1	100489996	A	G	0.00069	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr17	41144609	G	A	0.00821	RUNDC1	+	FALSE
chr5	114547295	C	A	0.00294	PGGT1B	-	FALSE
chr19	16661483	T	C	0.00824	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr1	145512937	A	G	1.47906E-06	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr12	44182706	A	G	0.00788	IRAK4	+	FALSE	MSTB-int	SINE,Alu
chr1	171486912	G	A	0.00866	PRRC2C	+	FALSE
chr1	74665493	G	A	0.00128	FPGT-TNNI3K,FPGT	+	FALSE
chr1	179327010	A	G	0.00085	SOAT1	+	TRUE
chr1	145694181	A	G	0.00052	NBPF20,NBPF10	+	TRUE	AluSz	SINE,Alu
chr4	248996	A	G	0.00123	ZNF876P	+	TRUE	AluYk3	SINE,Alu
chr1	179044174	A	G	0.00410	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	39305021	G	T	0.00046	RRAGC	-	FALSE
chr4	109551185	G	A	0.00344	RPL34	+	FALSE
chr1	173793106	C	T	0.00772	CENPL	-	FALSE
chr2	27293349	C	T	0.00503	AGBL5,OST4	+,-	FALSE
chr3	45721989	A	G	0.00713	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	114513901	C	T	0.00655	SLC35F5	-	FALSE
chr1	46774783	A	G	0.00163	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr1	201846675	C	T	0.00146	IPO9	+	FALSE
chr1	19953130	T	A	0.00595	MINOS1,MINOS1-NBL1	+	FALSE
chr1	110949720	C	T	0.00666	LAMTOR5	-	FALSE	L1ME4b	SINE,Alu
chr2	74332840	G	C	4.77205E-06	TET3	+	FALSE
chr1	900721	T	C	0.00109	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr2	201749994	T	C	0.00496	PPIL3	-	TRUE	AluSx	SINE,Alu
chr1	3545192	C	G	0.00011	TPRG1L	+	FALSE
chr8	145159712	A	G	0.00402	MAF1	+	FALSE
chr2	37329300	T	C	0.00925		.	FALSE	AluJr4	SINE,Alu
chr1	6684050	G	A	2.21294E-05	PHF13	+	FALSE
chr1	10517952	C	A	0.00341		.	FALSE
chr8	12880246	A	G	0.00012	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr1	204521580	A	G	0.00469	MDM4	+	TRUE	AluSg	SINE,Alu
chr11	119533726	A	G	0.00169	NECTIN1	-	FALSE
chr6	36894339	G	A	0.00650	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr6	31324078	G	T	0.00480		.	FALSE
chr1	19984100	G	C	0.00563	MINOS1-NBL1,NBL1	+	FALSE
chr19	57816261	A	G	0.00156		.	FALSE	AluY	SINE,Alu
chr6	150047370	T	C	0.00154	NUP43	-	TRUE	AluSc	SINE,Alu
chr9	125866691	A	C	0.00177	RABGAP1	+	FALSE
chr6	13788387	T	C	0.00240	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	86049390	A	G	0.00918	CYR61	+	FALSE
chr2	20401856	T	G	0.00263	SDC1	-	FALSE
chr2	129024188	T	G	0.00051	HS6ST1	-	FALSE
chr1	184661773	G	T	0.00082	EDEM3	-	FALSE
chr1	89477559	C	T	0.00044	GBP3	-	FALSE
chr1	87213188	C	A	0.00236	SH3GLB1	+	FALSE
chr5	1574319	T	A	0.00158	SDHAP3	-	FALSE
chr1	2335871	G	A	0.00298	RER1	+	FALSE
chr3	20025679	A	G	0.00292	RAB5A,PP2D1	+,-	FALSE
chr4	6644459	C	A	0.00109	MRFAP1	+	FALSE
chr1	38280010	C	T	0.00393	MTF1	-	FALSE
chr1	16890630	T	G	0.00147	NBPF1	-	FALSE
chr12	25360463	A	T	0.00118	KRAS	-	FALSE
chr17	55752444	C	T	0.00000	MSI2	+	FALSE
chr15	42859922	A	G	0.00731	HAUS2	+	TRUE	AluSx1	SINE,Alu
chr1	156565057	T	C	0.00423	GPATCH4	-	FALSE
chr1	117531621	A	G	0.00577	PTGFRN	+	FALSE
chr19	17535871	A	C	0.00948	MVB12A	+	FALSE
chr1	36068166	T	C	0.00686	PSMB2	-	TRUE	AluSc	SINE,Alu
chr6	29910581	C	A	6.62336E-05		.	FALSE
chr1	200375418	C	T	0.00425	ZNF281	-	FALSE
chr2	230629138	C	T	0.00958	TRIP12	-	FALSE
chr16	28296456	T	C	0.00772		.	FALSE	AluJb	SINE,Alu
chr1	109181308	T	A	0.00756	FAM102B	+	FALSE
chr1	46032311	A	G	0.00043	AKR1A1	+	FALSE
chr12	124146067	A	G	1.77884E-06	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr5	53181731	C	T	0.00707	ARL15	-	FALSE
chr1	19411087	C	T	0.00226	UBR4	-	FALSE
chr2	5837878	G	A	7.66453E-07	SOX11	+	FALSE
chr1	201846635	A	T	0.00293	IPO9	+	FALSE	(CA)n	SINE,Alu
chr2	105883650	T	G	0.00086	TGFBRAP1	-	FALSE
chr1	6282400	T	C	0.00601	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	66105198	C	A	0.00456	KCTD7	+	FALSE
chr1	145689533	A	G	0.00618	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	10519973	T	C	0.00586		.	FALSE	AluJr	SINE,Alu
chr16	10623705	T	C	0.00011	EMP2	-	TRUE	AluSp	SINE,Alu
chr17	43364288	A	G	0.00345	MAP3K14	-	FALSE
chr11	19245854	T	C	0.00078	E2F8	-	FALSE
chr4	103809241	A	T	0.00073	CISD2,SLC9B1	+,-	FALSE
chr1	31732892	G	A	0.00408	SNRNP40	-	FALSE
chr1	179829096	T	C	4.38746E-06	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	161931167	A	G	0.00251	ATF6	+	FALSE
chr1	26901090	C	T	0.00056	RPS6KA1	+	FALSE
chr1	118502685	T	A	0.00333	WDR3,SPAG17	+,-	FALSE
chr1	53289860	A	G	0.00119	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr6	150046734	T	C	0.00248	NUP43	-	FALSE
chr5	125961079	A	G	0.00258	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	9162243	T	C	0.00031		.	FALSE	AluSx	SINE,Alu
chr1	16112795	A	G	0.00106	FBLIM1	+	FALSE
chr1	220231484	T	C	0.00046	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	6283306	T	C	0.00609	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	170497653	T	G	0.00587		.	FALSE
chr12	27574433	A	G	0.00473	ARNTL2,ARNTL2-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	28864435	A	G	0.00088	RCC1	+	FALSE
chr3	156259317	T	C	0.00189	SSR3	-	TRUE	AluSq2	SINE,Alu
chr8	26435509	T	C	0.00121	DPYSL2	+	FALSE	(TC)n	SINE,Alu
chr1	225974581	A	G	0.00732	SRP9	+	TRUE	AluJr	SINE,Alu
chr9	117050998	G	A	0.00326	COL27A1	+	FALSE
chr1	75230606	C	T	0.00077	TYW3	+	FALSE
chr3	183476685	G	A	0.00032	YEATS2	+	FALSE
chr3	44791398	T	C	0.00081	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	40430967	G	T	0.00567	MFSD2A	+	FALSE
chr5	96372165	G	A	0.00149		.	FALSE
chr1	109967950	T	A	0.00096	PSMA5	-	FALSE
chr1	97144750	T	C	0.00262		.	FALSE
chr21	44836048	G	A	0.00542	LOC102724428,SIK1	-	FALSE
chr19	59095126	G	T	0.00303	CENPBD1P1	+	FALSE
chr6	42857111	A	G	0.00021	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr2	27293351	C	T	0.00314	AGBL5,OST4	+,-	FALSE
chr9	115447528	T	C	0.00112	INIP	-	TRUE	AluJb	SINE,Alu
chr1	153533813	A	T	0.00451	S100A2	-	FALSE
chr1	16889624	T	C	0.00794	NBPF1	-	TRUE
chr4	1387223	A	G	0.00155	CRIPAK	+	TRUE	AluSx	SINE,Alu
chr1	2434523	T	C	0.00064	PLCH2	+	FALSE
chr1	46076533	A	G	0.00832	NASP	+	TRUE	AluSx	SINE,Alu
chr5	125962176	A	G	0.00020	PHAX	+	TRUE	AluSc	SINE,Alu
chr15	102512797	A	G	0.00080	WASH3P	+	FALSE
chr3	49395695	A	C	0.00159	GPX1	-	FALSE
chr3	78646942	T	G	0.00093	ROBO1	-	FALSE
chr3	10322521	T	C	0.00531	TATDN2	+	FALSE
chr2	28635740	T	C	0.00358	FOSL2	+	FALSE
chr15	40954864	A	G	0.00636	KNL1	+	TRUE
chr1	53684924	A	G	0.00347	C1orf123	-	FALSE	L1MA5A	SINE,Alu
chr1	244572645	T	G	0.00218	ADSS	-	FALSE
chr1	16893763	T	C	0.00159	NBPF1	-	FALSE
chr1	6681836	G	A	5.48259E-05	PHF13	+	FALSE
chr3	49453834	C	T	0.00518	TCTA	+	FALSE
chr3	196670094	G	C	0.00017	NCBP2-AS2	+	FALSE
chr3	141667690	T	C	0.00018	TFDP2	-	TRUE	AluY	SINE,Alu
chr1	1593857	T	C	0.00424	CDK11B,SLC35E2B	-	FALSE
chr2	37330614	T	C	0.00410		.	FALSE	AluSq2	SINE,Alu
chr2	128061053	A	G	0.00184	MAP3K2	-	FALSE
chr1	173009536	T	A	0.00519		.	FALSE
chr1	231557138	C	G	0.00394	EGLN1	-	FALSE
chr1	185014720	A	G	0.00989	RNF2	+	FALSE
chr1	26608017	T	A	3.67009E-06		.	FALSE
chrX	123043142	A	G	0.00045	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	900720	A	T	0.00065	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	160966352	T	C	3.14235E-07	F11R	-	TRUE	AluSg	SINE,Alu
chr2	99812817	A	G	0.00018	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	145282799	G	A	0.00081	NBPF20,NOTCH2NL	+	FALSE
chr1	67874731	T	C	0.00613	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	6282255	T	C	0.00954	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	144521099	A	G	0.00682	NBPF20	+	FALSE
chr14	75202412	A	G	5.03546E-10	FCF1	+	TRUE	AluSc	SINE,Alu
chr2	112252630	A	C	0.00040	MIR4435-2HG	-	FALSE
chr1	201845882	G	A	0.00890	IPO9	+	FALSE
chr20	25427801	A	G	0.00300	GINS1	+	TRUE	AluSz	SINE,Alu

RBP	TBRG4
Knock-Method	shRNA
RBP Family	RAP
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR741YCA
Platform	HiSeq
Pubmed ID	32252787

TBRG4 - Target Gene Network