RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	113672634	A	G	0.00967		.	FALSE	AluJb	SINE,Alu
chr9	17835	A	G	0.00012	WASH1	-	FALSE
chr8	27632073	T	G	0.00013	ESCO2	+	FALSE
chr8	30643549	G	C	0.00257	PPP2CB	-	FALSE
chr6	42855256	A	G	0.00572	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	243289448	G	A	0.00036	CEP170	-	FALSE
chr15	41590932	A	G	0.00055	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	10520532	T	C	0.00142		.	FALSE	AluSx1	SINE,Alu
chr7	17384354	A	G	0.00282	AHR	+	TRUE	AluSx	SINE,Alu
chr1	327441	A	G	1.08612E-09		.	FALSE
chr3	48787052	T	C	0.00226	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr5	31554098	G	T	2.66454E-15	C5orf22	+	FALSE
chr1	154321623	G	A	0.00782	ATP8B2	+	FALSE
chr19	59095469	A	G	5.44182E-05	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr4	41673604	T	C	0.00580	LIMCH1	+	FALSE
chr1	6283558	A	T	0.00624	ICMT	-	FALSE
chr1	17393261	T	C	3.60266E-05	PADI2	-	FALSE
chr1	52375677	T	C	0.00542	RAB3B	-	FALSE	MIRb	SINE,Alu
chr4	7761567	C	G	1.89283E-11	AFAP1,AFAP1-AS1	+,-	FALSE
chr3	48485381	T	C	0.00103	TMA7	+	FALSE
chr1	28835847	A	G	5.60567E-05	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	225683184	G	T	0.00741	ENAH	-	FALSE
chr1	789050	G	A	0.00449	LINC01128	+	FALSE
chr4	120378207	A	G	8.04303E-06	LOC645513	+	FALSE
chr4	153545691	T	C	0.00671		.	FALSE	AluJb	SINE,Alu
chr2	207027628	A	G	0.00022	EEF1B2	+	FALSE
chr1	16889620	T	C	0.00884	NBPF1	-	FALSE
chr1	168220427	A	G	0.00670		.	FALSE	AluSz6	SINE,Alu
chr9	132575836	A	C	0.00546	TOR1A	-	FALSE
chr5	31553951	C	T	0.00240	C5orf22	+	FALSE
chrX	77083538	T	C	0.00055	MAGT1	-	TRUE	AluSz6	SINE,Alu
chrX	2824979	T	C	0.00049	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	94335332	G	T	0.00973	DNTTIP2	-	FALSE
chr2	99812876	A	G	0.00394	MRPL30	+	TRUE	AluJb	SINE,Alu
chr3	56703746	A	C	0.00027	FAM208A	-	FALSE
chr1	247319705	T	G	6.58458E-05	ZNF124	-	FALSE
chr11	67796144	A	T	0.00581	ALDH3B1	+	FALSE	AluSx	SINE,Alu
chr1	53679878	T	C	0.00348	C1orf123	-	FALSE
chr1	46827871	G	A	0.00014	NSUN4	+	FALSE
chr19	21474857	T	C	0.00131	ZNF708	-	TRUE	AluSc	SINE,Alu
chr5	43575020	T	C	8.37337E-06	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr5	40832548	A	T	0.00048	RPL37	-	FALSE
chr4	17803616	T	C	1.55934E-06	DCAF16	-	TRUE	AluY	SINE,Alu
chr20	25428587	A	G	0.00137	GINS1	+	TRUE	AluJb	SINE,Alu
chr12	131356731	T	C	2.96756E-07	RAN	+	FALSE	(GGCCGG)n	SINE,Alu
chr2	113513825	T	C	2.13681E-05	CKAP2L	-	FALSE
chr1	160990906	G	A	0.00270	F11R	-	FALSE
chr7	91630349	T	A	0.00111	AKAP9	+	FALSE
chr1	1419700	A	G	0.00464	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	220232143	T	C	7.81076E-05	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	16932429	C	G	0.00106	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr4	110635486	A	G	0.00021	PLA2G12A	-	FALSE
chr3	45722396	A	G	0.00231	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	19665310	C	T	0.00618	CAPZB	-	FALSE	(TTTCT)n	SINE,Alu
chr1	228880466	G	A	0.00216	RHOU	+	FALSE
chr10	75008965	T	C	0.00017	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr16	74698531	T	C	0.00702	RFWD3	-	TRUE	AluSx3	SINE,Alu
chr1	45975345	A	G	0.00357	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr6	150045926	T	C	0.00053	NUP43	-	TRUE	AluSq	SINE,Alu
chr1	144053567	C	T	0.00353		.	FALSE
chr1	242251696	C	T	0.00335	PLD5	-	FALSE
chr1	24999635	A	G	0.00602	SRRM1	+	FALSE
chr2	99812988	A	G	0.00793	MRPL30	+	TRUE	AluJb	SINE,Alu
chr2	34080819	A	C	0.00815	LINC01317	+	FALSE	MSTD	SINE,Alu
chr3	57612180	T	C	0.00018	DENND6A,PDE12	+,-	FALSE	AluSp	SINE,Alu
chr10	79800443	A	G	0.00971	RPS24	+	FALSE
chr2	61277384	A	G	0.00339	PEX13	+	TRUE	AluSx	SINE,Alu
chr2	133104541	A	G	0.00109		.	FALSE
chr1	19543457	T	C	0.00718	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	6283296	T	C	0.00106	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	9328213	A	G	5.00055E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	203277245	G	A	0.00115	BTG2	+	FALSE
chr1	120165040	T	C	0.00107	ZNF697	-	FALSE
chr1	24935337	A	G	0.00773	NCMAP	+	TRUE	AluJb	SINE,Alu
chr10	121588038	A	C	0.00100	INPP5F	+	FALSE
chr1	156692054	A	T	0.00471	ISG20L2	-	FALSE	AluY	SINE,Alu
chr1	6282237	T	C	0.00372	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	22983702	A	T	7.71363E-07	FAM126A	-	FALSE
chr16	10626630	T	C	0.00051	EMP2	-	FALSE	(T)n	SINE,Alu
chr3	49142142	G	T	6.70614E-05	QARS	-	FALSE
chr17	76117147	G	A	0.00606	TMC6	-	FALSE
chr1	247350690	G	C	0.00364		.	FALSE	L1MA7	SINE,Alu
chr4	39551008	T	C	0.00106	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr21	34730077	A	G	0.00019	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	27107950	G	A	0.00249	ARID1A	+	FALSE
chr1	36068052	G	T	1.69686E-12	PSMB2	-	FALSE	L1ME4b	SINE,Alu
chr3	195963500	C	T	0.00014		.	FALSE
chr1	78445292	A	G	7.48186E-07	DNAJB4	+	FALSE
chr3	156258319	T	C	0.00909	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	156495520	T	A	0.00048	IQGAP3	-	FALSE
chr2	128952699	A	G	0.00497	UGGT1	+	TRUE	AluSp	SINE,Alu
chr1	160967833	T	C	0.00717	F11R	-	TRUE	AluSp	SINE,Alu
chr1	28825370	A	G	0.00617	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	146215138	A	G	0.00038	NBPF20,NBPF10,NBPF25P	+	FALSE
chr19	13883548	A	G	0.00566	MRI1	+	TRUE	AluYk3	SINE,Alu
chr1	16912014	A	C	0.00029	NBPF1	-	FALSE
chr17	45195951	T	C	0.00011	CDC27	-	TRUE	MADE1	SINE,Alu
chr1	214529740	T	C	0.00356	PTPN14	-	TRUE
chr6	26095642	A	G	0.00332		.	FALSE	AluY	SINE,Alu
chr12	123253741	A	G	0.00134	DENR	+	TRUE	(AT)n	SINE,Alu
chr1	156084582	T	C	0.00195	LMNA	+	FALSE
chr17	4840811	A	G	0.00554	SLC25A11	-	FALSE
chr1	40539201	A	G	0.00028	PPT1	-	FALSE
chr4	165998692	T	C	0.00568	TMEM192	-	TRUE	AluSg	SINE,Alu
chr12	53435277	G	T	2.75857E-05	EIF4B	+	FALSE
chr3	179116220	T	C	0.00343	GNB4	-	TRUE	AluSz6	SINE,Alu
chr6	3022544	T	C	7.02821E-06	HTATSF1P2	-	TRUE	AluJr	SINE,Alu
chr1	97144750	T	C	0.00262		.	FALSE
chr1	33277080	C	T	8.00797E-06	YARS	-	FALSE	LTR6A	SINE,Alu
chr1	222907790	C	T	0.00253	BROX	+	FALSE
chr1	33149373	A	G	0.00264	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr12	7045885	A	C	0.00473	ATN1	+	FALSE	(CAG)n	SINE,Alu
chr3	194998813	A	G	0.00572	ACAP2	-	FALSE	AluSx1	SINE,Alu
chr1	15015	G	C	0.00809	WASH7P	-	FALSE
chr2	191745653	T	G	0.00030	GLS	+	FALSE
chr2	37330435	T	C	0.00401		.	FALSE	AluSq2	SINE,Alu
chr3	49131374	G	C	0.00905	QRICH1	-	FALSE	(CCG)n	SINE,Alu
chr1	46093409	A	C	0.00383	GPBP1L1	-	FALSE	A-rich	SINE,Alu
chr3	48787042	T	C	1.97898E-05	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr13	24823699	G	A	0.00472	SPATA13	+	FALSE
chr2	1637531	A	G	0.00664	PXDN	-	FALSE
chr4	155457049	T	A	0.00434	PLRG1	-	FALSE	L2d2	SINE,Alu
chr1	6282215	T	C	0.00187	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	21941587	G	C	5.72060E-05	CDCA7L	-	FALSE
chr20	36147563	T	C	0.00313	BLCAP	-	TRUE
chr1	1595540	T	C	0.00830	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr5	41919747	C	T	0.00814	C5orf51	+	FALSE	L2c	SINE,Alu
chr1	201438096	G	T	1.87636E-05	PHLDA3	-	FALSE
chr1	22419434	T	G	0.00649	CDC42	+	FALSE
chr12	32532499	A	T	0.00119		.	FALSE
chr3	113528892	A	T	8.78648E-05	ATP6V1A	+	FALSE	AluSp	SINE,Alu
chr3	23959425	C	G	0.00000	RPL15	+	FALSE
chr1	42644770	C	T	1.21495E-06	FOXJ3	-	FALSE
chr1	145688665	T	A	0.00015	NBPF20,NBPF10,RNF115	+	FALSE
chr21	40567667	A	G	0.00658	BRWD1	-	FALSE
chr5	139680027	A	G	0.00155	PFDN1	-	FALSE
chr10	16554733	G	T	0.00706	PTER	+	FALSE
chr9	132266644	A	G	0.00081	LINC00963	+	TRUE	AluSx	SINE,Alu
chr1	12024235	C	T	0.00395	PLOD1	+	FALSE
chr1	226573364	A	G	0.00128	PARP1	-	FALSE
chr1	24989266	A	T	0.00392	SRRM1	+	FALSE
chr2	176791181	T	C	0.00063	LNPK	-	TRUE	MSTD	SINE,Alu
chr6	74133914	T	C	0.00014		.	FALSE	AluY	SINE,Alu
chr5	44826677	G	T	0.00941		.	FALSE	(T)n	SINE,Alu
chr1	59121768	G	C	0.00196	MYSM1	-	FALSE
chr3	49397323	T	C	0.00000	RHOA	-	TRUE
chr10	13320111	G	T	0.00571	PHYH	-	FALSE
chr2	27315252	G	A	0.00377	KHK	+	FALSE
chr1	19543309	T	C	0.00769	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr12	9098987	T	A	0.00180	M6PR	-	FALSE
chr12	120899168	A	G	6.24570E-05	GATC	+	TRUE	AluJr	SINE,Alu
chr1	109476780	C	T	0.00990	GPSM2,CLCC1	+,-	FALSE
chr17	38788606	G	T	1.11022E-15	SMARCE1	-	FALSE
chr7	98258736	G	A	0.00348	NPTX2	+	FALSE
chr4	71683841	T	C	8.62096E-05	GRSF1	-	TRUE	AluSz	SINE,Alu
chr1	6282334	T	C	0.00408	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	16889864	C	A	0.00094	NBPF1	-	FALSE
chr11	119533724	C	G	0.00232	NECTIN1	-	FALSE
chr1	100654765	T	C	0.00254	DBT	-	TRUE	AluSz	SINE,Alu
chr1	36068231	T	C	0.00022	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	232574807	C	G	0.00134	PTMA	+	FALSE
chr2	37075013	T	A	0.00754	STRN	-	FALSE
chr1	150704413	T	C	0.00236	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	206566048	G	C	0.00125	SRGAP2	+	FALSE
chr1	21810586	C	T	0.00540	NBPF3	+	FALSE
chr1	37945905	A	T	0.00038	ZC3H12A	+	FALSE
chr17	49042216	T	C	0.00746	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	46076462	A	G	1.23194E-07	NASP	+	TRUE	AluSx	SINE,Alu
chr1	144595886	G	A	0.00242	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	28865500	T	A	0.00509	RCC1	+	FALSE
chr1	46076543	A	G	0.00156	NASP	+	TRUE	AluSx	SINE,Alu
chr1	65898269	C	T	0.00399	LEPR,LEPROT	+	FALSE	MIRc	SINE,Alu
chr3	99517483	C	T	0.00070	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr17	61502458	T	A	0.00317	TANC2	+	FALSE
chr6	42856917	A	G	0.00148	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	67874697	T	C	0.00642	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr2	86979093	G	A	0.00591	RMND5A	+	FALSE
chr2	217498311	T	C	0.00977	IGFBP2	+	FALSE	(CCG)n	SINE,Alu
chr1	144599819	C	T	0.00682	NBPF20	+	FALSE
chr1	89447882	A	G	0.00103	KYAT3,RBMXL1	-	FALSE
chr1	10521172	T	C	0.00244	DFFA	-	TRUE	AluY	SINE,Alu
chr4	1305799	C	T	0.00271	MAEA	+	FALSE
chr12	6840209	G	A	0.00820	COPS7A	+	FALSE
chr21	34729969	A	G	0.00077	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr8	146200325	T	C	0.00599	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr2	183817957	T	A	0.00031	NCKAP1	-	FALSE
chr11	9466935	T	G	0.00439	IPO7	+	FALSE
chr1	168220489	A	G	0.00525		.	FALSE	AluSz6	SINE,Alu
chr1	28864731	A	G	0.00477	RCC1	+	FALSE
chr14	103941379	C	A	0.00705	MARK3	+	FALSE
chr6	37142192	C	T	0.00850	PIM1	+	FALSE
chr3	101369192	C	T	0.00761	ZBTB11	-	FALSE
chr2	61764098	A	C	0.00112	XPO1	-	FALSE
chr1	46521559	A	T	0.00177	PIK3R3	-	FALSE
chr1	1325721	C	T	0.00471	CCNL2	-	FALSE
chr1	11810674	G	A	0.00279	AGTRAP	+	FALSE
chr1	145689537	A	G	0.00341	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr3	15113656	T	C	1.73787E-06	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	46159823	T	A	0.00461	TMEM69	+	FALSE
chr6	24780892	A	C	0.00246	GMNN	+	FALSE
chr2	219523584	C	T	0.00299	ZNF142	-	FALSE
chr12	133298428	A	G	7.41792E-11	PGAM5	+	TRUE	AluSp	SINE,Alu
chr2	69689663	T	C	0.00091	AAK1	-	TRUE	AluSg	SINE,Alu
chr1	19542269	T	C	0.00744	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	145513114	A	G	0.00033	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr8	128752643	G	A	4.26326E-14	MYC	+	FALSE	GA-rich	SINE,Alu
chr1	226923264	G	A	0.00046	ITPKB	-	FALSE
chr20	54963816	T	C	0.00750	AURKA	-	TRUE	AluSq10	SINE,Alu
chr1	19543456	T	C	0.00386	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr4	165998694	T	C	0.00041	TMEM192	-	TRUE	AluSg	SINE,Alu
chr1	10520683	T	C	0.00124	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	53289892	A	G	0.00505	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr7	17384334	A	G	0.00013	AHR	+	TRUE	AluSx	SINE,Alu
chr1	26143727	A	T	0.00917	SEPN1	+	FALSE	AluSx	SINE,Alu
chr2	64687777	G	T	7.38315E-07	LGALSL	+	FALSE
chr1	1571802	G	A	0.00067	CDK11B	-	FALSE
chr1	36770073	A	T	4.33965E-05	THRAP3	+	FALSE
chr8	41399823	A	G	0.00172	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr5	112312528	T	C	0.00827	DCP2	+	FALSE
chr15	89739348	A	G	0.00035	ABHD2	+	FALSE	MER5A	SINE,Alu
chr10	98278593	A	T	0.00792	TM9SF3	-	FALSE
chr1	109818161	C	T	0.00864	CELSR2	+	FALSE
chr1	21806710	T	G	0.00194	NBPF3	+	FALSE
chr1	8412989	A	G	0.00225	RERE	-	FALSE
chr12	10311410	A	G	0.00909	OLR1	-	FALSE
chr5	118174855	T	C	1.06010E-07	DTWD2	-	TRUE	AluY	SINE,Alu
chr9	125609939	A	T	0.00693		.	FALSE
chr3	140695493	C	A	0.00559	SLC25A36	+	FALSE
chr1	8045340	C	A	0.00059	PARK7	+	FALSE
chr1	156495521	C	A	0.00097	IQGAP3	-	FALSE
chr1	19585772	G	A	2.66054E-05	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr2	37331038	T	C	0.00261		.	FALSE	AluSx1	SINE,Alu
chr1	8045340	C	A	0.00242	PARK7	+	FALSE
chr10	75008731	T	C	8.90942E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	204521580	A	G	0.00469	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	204526727	A	G	0.00033	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	23408939	T	A	1.04314E-06	KDM1A	+	FALSE
chr7	128143289	A	G	0.00082		.	FALSE	AluSc8	SINE,Alu
chr1	54231849	C	T	0.00812	NDC1	-	FALSE
chr3	10285030	G	A	0.00384	IRAK2	+	FALSE
chr1	17345245	C	T	0.00812	SDHB	-	FALSE
chr1	89447720	G	A	0.00029	KYAT3,RBMXL1	-	FALSE
chr2	170403030	T	C	0.00294	FASTKD1	-	FALSE
chr10	63829539	C	T	0.00918	ARID5B	+	FALSE
chr19	9673005	T	C	0.00017		.	FALSE	AluSx3	SINE,Alu
chr1	225683161	T	G	0.00168	ENAH	-	FALSE	(T)n	SINE,Alu
chr4	128756632	A	G	0.00072		.	FALSE	AluSx	SINE,Alu
chr1	220231276	T	C	0.00545	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	244572643	C	A	0.00681	ADSS	-	FALSE
chr1	144481235	A	G	1.18230E-05	NBPF20	+	FALSE
chr1	46032311	A	G	0.00340	AKR1A1	+	FALSE
chr1	1231173	C	T	1.33148E-07	ACAP3	-	FALSE
chr1	144930940	T	C	0.00181	NBPF20,PDE4DIP	+,-	FALSE
chr4	39460539	G	A	0.00323	RPL9	-	FALSE
chr1	59124223	G	A	0.00256	MYSM1	-	FALSE	MIR3	SINE,Alu
chr14	103372469	A	C	0.00683	TRAF3	+	FALSE	(AC)n	SINE,Alu
chr1	171561203	T	G	0.00075	PRRC2C	+	FALSE
chr14	68144079	G	T	0.00974	RDH11	-	FALSE
chr3	14986111	T	C	0.00000	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr7	91742142	C	A	0.00478	CYP51A1	-	FALSE	AluSx3	SINE,Alu
chr1	143189473	C	A	0.00572	LOC102723769	-	FALSE
chr2	37328034	T	C	0.00046		.	FALSE
chr1	110276861	T	C	0.00180	GSTM3	-	FALSE	LTR77	SINE,Alu
chr12	44181367	G	A	0.00608	IRAK4	+	FALSE	MLT1E1A	SINE,Alu
chr1	3753136	A	T	0.00088	CEP104	-	FALSE
chr1	204526795	A	G	0.00199	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	220231484	T	C	0.00954	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	160967856	T	C	0.00100	F11R	-	TRUE	AluSp	SINE,Alu
chr1	180013235	T	G	0.00319	CEP350	+	FALSE
chr1	39470995	A	C	0.00036	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr2	242615532	C	A	0.00603	DTYMK	-	FALSE
chr3	172115476	A	G	0.00892	FNDC3B	+	FALSE	(A)n	SINE,Alu
chr1	205583610	T	C	0.00501	ELK4	-	FALSE
chr1	246714587	G	A	0.00150	TFB2M	-	FALSE
chr2	176042871	A	T	0.00204	ATP5G3	-	FALSE
chr6	3154871	A	C	7.50591E-06	TUBB2A	-	FALSE
chr3	50686350	T	G	2.12445E-05	MAPKAPK3	+	FALSE
chr7	117825681	A	G	1.90524E-05	LSM8	+	FALSE
chr1	115299508	A	T	0.00070	CSDE1	-	FALSE
chr14	66209686	T	A	7.37485E-06	FUT8	+	FALSE	(TT)n	SINE,Alu
chr1	3545191	C	T	5.51731E-05	TPRG1L	+	FALSE
chr1	53288897	A	G	0.00299	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr12	125512534	A	G	0.00024		.	FALSE
chr5	139931630	A	T	0.00052	SRA1	-	FALSE
chr2	55516937	G	T	0.00250	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr2	37330487	T	C	0.00242		.	FALSE	AluSq2	SINE,Alu
chr1	209605643	A	C	0.00590	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chr1	111489899	C	A	0.00041	LRIF1	-	FALSE
chr10	15120275	T	C	0.00387	ACBD7	-	TRUE	L1PA7	SINE,Alu
chr2	31491075	A	G	0.00061	EHD3	+	FALSE
chr1	211918115	C	T	0.00979	LPGAT1	-	FALSE	MER63D	SINE,Alu
chr17	41133089	C	T	0.00179	RUNDC1	+	FALSE
chr7	65619292	A	G	0.00189	CRCP	+	TRUE	AluSz6	SINE,Alu
chr1	6354955	G	A	0.00282	ACOT7	-	FALSE
chr7	66038472	G	A	0.00964	GS1-124K5.11	-	FALSE
chrX	77084007	T	C	0.00141	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	228880135	C	T	0.00026	RHOU	+	FALSE
chr1	15989141	C	G	0.00364		.	FALSE
chr2	37328097	T	C	0.00091		.	FALSE
chr20	43706946	A	G	0.00434	STK4	+	TRUE	AluSx4	SINE,Alu
chr3	178741082	A	C	0.00145	ZMAT3	-	FALSE
chr2	55459824	C	T	0.00786	RPS27A	+	FALSE
chr10	75008815	T	C	5.77576E-09	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr3	57743246	G	A	0.00221	SLMAP	+	FALSE
chr1	10438014	A	C	0.00046	KIF1B	+	FALSE
chr1	1419678	A	G	0.00558	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	144822066	A	G	0.00020	NBPF20,NBPF9	+	FALSE
chr15	63616881	G	A	0.00026	CA12	-	FALSE
chr5	125962354	A	G	3.71532E-05	PHAX	+	TRUE	AluSc	SINE,Alu
chr3	170893070	G	A	0.00071	TNIK	-	FALSE
chr3	195411991	C	A	0.00058	SDHAP2	+	FALSE
chr1	327538	A	G	0.00010		.	FALSE
chr7	2278515	T	C	0.00937	MRM2	-	TRUE	AluSx1	SINE,Alu
chr4	124237124	A	G	0.00119	SPATA5	+	TRUE	AluJr	SINE,Alu
chr8	100890423	C	A	0.00113	COX6C	-	FALSE
chr5	70503941	C	A	0.00130		.	FALSE
chr1	1593857	T	C	0.00424	CDK11B,SLC35E2B	-	FALSE
chr1	160990878	C	T	9.31086E-06	F11R	-	FALSE
chr4	152020782	C	T	0.00989	RPS3A	+	FALSE
chr16	10623543	T	C	0.00025	EMP2	-	TRUE	AluSp	SINE,Alu
chr13	46700519	C	A	0.00089	LCP1	-	FALSE
chr1	10520099	T	C	6.30717E-05		.	FALSE	AluSx	SINE,Alu
chr19	1981317	T	A	0.00539	CSNK1G2	+	FALSE
chr1	53359187	A	G	0.00813	ZYG11A	+	TRUE	AluSx	SINE,Alu
chr1	46269493	G	C	0.00233	MAST2	+	FALSE
chr1	45975345	A	G	0.00071	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	31837516	G	C	5.10721E-05	ZCCHC17	+	FALSE
chr8	11701297	T	C	0.00288	CTSB	-	TRUE	AluSx1	SINE,Alu
chr13	99056476	A	T	0.00535	FARP1	+	FALSE
chr1	120839743	C	T	0.00647	FAM72B	+	FALSE
chr4	113108680	A	G	0.00109	C4orf32	+	FALSE
chr1	10520145	T	C	0.00424		.	FALSE	AluSx	SINE,Alu
chr1	46075661	A	G	0.00071	NASP	+	TRUE	AluSx4	SINE,Alu
chr17	65334766	T	C	4.45484E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	29644328	C	T	0.00076	PTPRU	+	FALSE
chr1	9740895	A	T	0.00136	PIK3CD,PIK3CD-AS2	+,-	FALSE	MLT1F1	SINE,Alu
chr1	179832748	G	C	7.50400E-12	TOR1AIP2	-	FALSE	FLAM_C	SINE,Alu
chr3	189713205	T	C	4.97145E-05	P3H2	-	FALSE
chr3	10192747	A	G	0.00065	VHL	+	TRUE	AluSx1	SINE,Alu
chr9	19376252	A	T	0.00367		.	FALSE
chr1	46076533	A	G	1.88265E-05	NASP	+	TRUE	AluSx	SINE,Alu
chr15	90820068	A	G	0.00194		.	FALSE	AluY	SINE,Alu
chr1	78414310	C	A	0.00067	FUBP1	-	FALSE
chr1	179055020	C	T	0.00738	TOR3A	+	FALSE
chr1	120162442	T	C	0.00065	ZNF697	-	FALSE
chr2	206983267	T	C	0.00854		.	FALSE	AluJb	SINE,Alu
chr12	64842974	C	A	0.00925		.	FALSE	AluSz	SINE,Alu
chr1	10519888	T	C	0.00218		.	FALSE	AluJr	SINE,Alu
chr11	34379275	T	C	0.00994	ABTB2	-	FALSE
chr4	247533	A	G	0.00972	ZNF876P	+	FALSE
chr8	56985608	A	T	0.00077	RPS20	-	FALSE
chr1	53290057	A	G	0.00142	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr9	96438974	C	G	0.00303	PHF2	+	FALSE	(CTCCAC)n	SINE,Alu
chr5	72801321	T	A	0.00280	BTF3	+	FALSE
chr15	39887848	G	A	0.00664	THBS1	+	FALSE
chr1	9161011	T	C	0.00190		.	FALSE	AluJb	SINE,Alu
chr1	10517635	T	C	7.30839E-07		.	FALSE	AluSx1	SINE,Alu
chr3	149459413	C	T	0.00097	COMMD2	-	FALSE
chr5	256514	G	C	0.00198	SDHA	+	FALSE
chr16	81064629	A	G	6.04166E-07	CENPN	+	TRUE	AluSg	SINE,Alu
chr15	45366812	A	G	0.00446	SORD	+	FALSE
chr1	28865502	G	A	0.00073	RCC1	+	FALSE
chr6	42856330	A	G	2.22045E-16	RPL7L1	+	TRUE
chr1	236714384	G	A	2.81217E-05	LGALS8,HEATR1	+,-	FALSE
chr2	128063523	G	C	0.00174	MAP3K2	-	FALSE
chr1	114940227	T	C	0.00852	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	212114662	A	G	0.00858	INTS7	-	FALSE
chr3	158547143	G	A	0.00178	MFSD1	+	FALSE
chr1	145284136	G	A	0.00072	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr1	160965379	T	C	0.00010	F11R	-	TRUE	AluSc	SINE,Alu
chr1	117531179	G	A	0.00116	PTGFRN	+	FALSE
chr1	25893927	A	G	0.00081	LDLRAP1	+	FALSE
chr3	195963399	G	A	0.00341		.	FALSE
chr2	9629954	T	C	0.00308	ADAM17	-	FALSE
chr2	47130527	G	A	0.00462	MCFD2	-	FALSE
chr1	31905886	C	A	0.00335	SERINC2	+	FALSE
chr3	30733403	A	T	0.00840	TGFBR2	+	FALSE	(TA)n	SINE,Alu
chr1	150704633	T	C	1.58455E-05	CTSS	-	TRUE	AluJo	SINE,Alu
chr7	55433880	G	C	0.00115	LANCL2	+	FALSE
chr4	38016395	T	G	0.00537	TBC1D1	+	FALSE
chr17	5288083	T	A	0.00232	RABEP1	+	FALSE
chr1	10517456	T	C	0.00722		.	FALSE	AluSx1	SINE,Alu
chr1	25775374	C	T	0.00710	TMEM57	+	FALSE
chr1	46164493	T	C	0.00330	IPP	-	TRUE	AluJb	SINE,Alu
chr1	40539202	G	A	0.00966	PPT1	-	FALSE
chr1	32661600	C	T	0.00235	TXLNA	+	FALSE	(T)n	SINE,Alu
chr1	138156	G	T	0.00413	LOC729737	-	FALSE
chr19	11945632	A	G	2.87422E-05	ZNF440	+	TRUE	AluSp	SINE,Alu
chr5	93018903	T	A	5.97109E-08	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr19	53914418	A	G	0.00891	ZNF765	+	TRUE	AluSx	SINE,Alu
chr1	145442111	C	A	0.00090	NBPF20,NBPF10,TXNIP	+	FALSE
chr5	149829068	C	T	0.00038	RPS14	-	FALSE
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr2	136542427	T	A	0.00075	UBXN4	+	FALSE	L1ME4b	SINE,Alu
chr1	179042905	A	G	0.00034	FAM20B	+	TRUE
chr2	152334055	A	G	0.00064		.	FALSE	AluY	SINE,Alu
chr3	57542173	C	T	0.00020	PDE12	+	FALSE
chr1	214529742	T	C	6.22071E-05	PTPN14	-	TRUE
chr1	19542401	T	C	0.00071	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	33149508	A	G	0.00871	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	61277775	A	G	0.00640	PEX13	+	TRUE	AluY	SINE,Alu
chr1	46075604	A	G	0.00155	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	99812289	A	G	0.00282	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	169101273	T	G	0.00522	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr1	15736752	G	A	0.00170	EFHD2	+	FALSE
chr17	8286136	T	A	0.00706	RPL26	-	FALSE
chr1	160967857	T	C	0.00032	F11R	-	TRUE	AluSp	SINE,Alu
chr1	227922767	G	T	0.00202	SNAP47,JMJD4	+,-	FALSE
chr3	49315576	T	C	0.00191	USP4	-	FALSE
chr1	32697085	T	C	0.00366	EIF3I	+	FALSE	AluSp	SINE,Alu
chr16	75479910	T	C	0.00026	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	179044110	A	G	0.00931	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	10520378	T	C	0.00145		.	FALSE	AluSx1	SINE,Alu
chr1	19238556	G	A	6.03260E-07	IFFO2	-	FALSE
chr1	236716959	C	T	0.00727	HEATR1	-	FALSE
chr1	16958047	C	T	2.98219E-05		.	FALSE
chr6	42856029	A	G	0.00099	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	19543353	T	C	0.00081	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr4	17803673	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr12	120898553	A	G	0.00233	GATC	+	TRUE	AluY	SINE,Alu
chr1	160967899	T	C	0.00011	F11R	-	TRUE	AluSp	SINE,Alu
chr1	3729587	A	G	0.00580	CEP104	-	FALSE	(AT)n	SINE,Alu
chr7	102119322	T	C	0.00834	POLR2J	-	FALSE
chr1	89649369	T	C	0.00333	GBP4	-	TRUE	AluJb	SINE,Alu
chr1	16954981	C	A	0.00876	CROCCP2	-	FALSE
chr1	220231455	T	C	0.00274	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	67874697	T	C	0.00186	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	154323598	T	A	0.00198	ATP8B2	+	FALSE	(TA)n	SINE,Alu
chr1	93804952	G	A	0.00421	CCDC18-AS1	-	FALSE
chr4	120979187	T	C	0.00046		.	FALSE	AluSg4	SINE,Alu
chr1	97543764	C	T	0.00840	DPYD	-	FALSE
chr1	23240263	G	A	5.22984E-05	EPHB2	+	FALSE
chr1	52306075	T	C	8.71211E-05	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr2	61276750	A	G	0.00231	PEX13	+	TRUE	AluSp	SINE,Alu
chr1	10516656	C	T	0.00808		.	FALSE
chr3	72424929	A	G	0.00988	RYBP	-	FALSE
chr1	144931727	G	A	0.00521	NBPF20,PDE4DIP	+,-	FALSE
chr4	53463566	C	T	5.12751E-05	USP46	-	FALSE
chr2	3504687	A	G	0.00755	ADI1	-	FALSE
chr3	99463810	G	T	0.00599	MIR548G,COL8A1	+,-	FALSE
chr1	9815354	T	G	0.00212	CLSTN1	-	FALSE
chr1	89299658	G	A	0.00779	PKN2	+	FALSE
chr1	179042697	A	G	0.00092	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr17	46025078	A	G	0.00021	PNPO	+	TRUE	AluSc	SINE,Alu
chr5	179020622	T	C	2.11448E-05	RUFY1	+	FALSE
chr1	53291434	A	G	0.00318	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	36067677	T	C	0.00462	PSMB2	-	TRUE	AluSz	SINE,Alu
chr6	52226984	G	A	0.00127	PAQR8	+	FALSE	(GCTCGG)n	SINE,Alu
chr1	145441843	G	A	0.00744	NBPF20,NBPF10,TXNIP	+	FALSE
chr1	32638906	C	T	5.73102E-10	KPNA6	+	FALSE
chr1	24862643	T	G	0.00079	RCAN3	+	FALSE

RBP	PABPN1
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR416ZJH
Platform	HiSeq
Pubmed ID	32252787

PABPN1 - Target Gene Network