RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr11	68523337	T	C	0.00016	CPT1A	-	TRUE	AluSq	SINE,Alu
chr1	45975348	T	C	0.00062	MMACHC	+	FALSE	AluSg7	SINE,Alu
chr1	19953132	C	A	0.00910	MINOS1,MINOS1-NBL1	+	FALSE
chr1	6283264	T	C	0.00127	ICMT	-	TRUE	AluSx3	SINE,Alu
chr6	52226984	G	A	0.00127	PAQR8	+	FALSE	(GCTCGG)n	SINE,Alu
chr4	120979770	T	C	0.00437		.	FALSE	AluSg	SINE,Alu
chr4	2516790	G	T	7.50309E-05	RNF4	+	FALSE
chr1	32697063	T	C	0.00035	EIF3I	+	FALSE	AluSp	SINE,Alu
chr2	91847976	C	T	0.00010		.	FALSE	TAR1	SINE,Alu
chr4	109733172	T	C	0.00480	COL25A1	-	FALSE
chr2	96934504	T	C	0.00021	CIAO1	+	FALSE
chr19	21367088	A	G	0.00018	ZNF431	+	TRUE	AluSc	SINE,Alu
chr17	65335356	T	C	5.15611E-11	PSMD12	-	TRUE	AluSx	SINE,Alu
chr3	17199207	T	A	0.00075	TBC1D5	-	FALSE	A-rich	SINE,Alu
chr1	109818160	T	G	0.00745	CELSR2	+	FALSE
chr1	145509569	A	G	0.00405	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr2	37328087	T	C	0.00335		.	FALSE
chr1	145281656	A	T	0.00768	NBPF20,NOTCH2NL	+	FALSE
chr1	145512925	A	G	0.00238	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr12	27574427	A	G	7.32829E-06	ARNTL2,ARNTL2-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	1252443	T	C	8.33820E-06	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr3	156258319	T	C	0.00909	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	19543356	T	C	0.00110	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	49395693	C	G	0.00243	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr3	49396751	T	C	0.00311	RHOA	-	FALSE
chr1	11119935	G	T	2.46542E-05	SRM	-	FALSE
chr2	25013062	T	C	0.00327		.	FALSE
chr1	44423703	C	T	1.17684E-14	IPO13	+	FALSE
chr3	10193743	T	C	0.00456	VHL	+	FALSE	AluJr	SINE,Alu
chr1	120839683	G	A	0.00875	FAM72B	+	FALSE
chr17	57281125	A	G	0.00204	PRR11	+	TRUE	AluSz	SINE,Alu
chr17	49042242	T	C	0.00054	SPAG9	-	TRUE	AluJb	SINE,Alu
chr16	75479474	T	C	2.06057E-06	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	179044309	A	G	0.00558	FAM20B	+	TRUE	AluSx	SINE,Alu
chr2	99772813	A	G	1.48642E-06	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr1	160966301	T	C	7.77749E-07	F11R	-	TRUE	AluSg	SINE,Alu
chr1	143399198	C	T	0.00146		.	FALSE
chr12	133298417	A	G	6.66134E-16	PGAM5	+	TRUE	AluSp	SINE,Alu
chr4	128757345	A	G	0.00040		.	FALSE	AluY	SINE,Alu
chr1	119574587	C	T	0.00901	WARS2	-	FALSE
chr1	176176230	G	A	0.00168	RFWD2	-	FALSE
chr2	203744550	T	C	0.00037		.	FALSE	AluSx1	SINE,Alu
chr4	39552183	T	C	0.00479	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr10	104661031	A	G	0.00265	BORCS7-ASMT,AS3MT	+	TRUE	AluY	SINE,Alu
chr3	169810385	C	T	0.00621	PHC3	-	FALSE
chr12	133314509	T	C	0.00229	ANKLE2	-	TRUE	AluJr	SINE,Alu
chr18	6986259	G	A	5.32960E-05	LAMA1	-	FALSE
chr6	24780892	A	C	0.00246	GMNN	+	FALSE
chr1	213071445	G	A	0.00233	FLVCR1	+	FALSE	MIR3	SINE,Alu
chr1	26755455	A	G	0.00342	LIN28A	+	TRUE	AluSc	SINE,Alu
chr1	6585215	C	T	0.00286	NOL9	-	FALSE	FAM	SINE,Alu
chr3	33138549	G	A	0.00612	GLB1	-	FALSE
chr19	58356540	A	G	0.00019	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr1	45975498	A	G	0.00018	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr6	107113955	A	G	0.00265	QRSL1	+	TRUE	AluSg	SINE,Alu
chr1	40974799	T	C	0.00038	EXO5	+	FALSE
chr2	202038524	A	G	0.00382		.	FALSE	AluSx1	SINE,Alu
chr1	19499560	T	C	0.00100	UBR4	-	FALSE
chr17	4574751	T	A	0.00246	PELP1	-	FALSE
chr1	145512141	A	G	0.00215	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	1662754	T	C	0.00856	SLC35E2	-	TRUE	AluY	SINE,Alu
chr9	131457039	C	T	0.00148	SET	+	FALSE
chr1	89225976	T	C	0.00586	PKN2	+	FALSE
chr3	40353791	A	T	0.00419	EIF1B	+	FALSE
chr2	37331745	T	C	0.00097		.	FALSE	AluJb	SINE,Alu
chr1	184675814	G	A	0.00048	EDEM3	-	FALSE
chr2	56611541	G	A	0.00521	CCDC85A	+	FALSE
chr3	9848222	A	T	0.00083	ARPC4,ARPC4-TTLL3	+	FALSE
chr2	206983298	T	C	0.00811		.	FALSE	AluJb	SINE,Alu
chr14	53109732	T	C	0.00013	ERO1A	-	TRUE	MER53	SINE,Alu
chr1	1017747	A	G	0.00142	C1orf159	-	FALSE
chr9	36216895	T	C	0.00130	GNE	-	TRUE	AluY	SINE,Alu
chr2	38971040	G	T	0.00651	SRSF7	-	FALSE
chrX	123047168	A	G	2.82326E-05	XIAP	+	TRUE	AluSx	SINE,Alu
chr1	113243096	G	T	0.00114	MOV10	+	FALSE
chr2	86252136	T	C	0.00015	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr19	42376711	A	G	0.00223		.	FALSE	AluSp	SINE,Alu
chr16	71765443	C	T	0.00223	AP1G1	-	FALSE
chr1	120539742	G	A	0.00469	NOTCH2	-	FALSE
chr5	79277950	C	A	0.00037	MTX3	-	FALSE	(AC)n	SINE,Alu
chr17	42225547	A	C	0.00240	C17orf53	+	FALSE
chr1	10519912	T	C	0.00613		.	FALSE	AluJr	SINE,Alu
chr19	46052975	T	C	0.00652	OPA3	-	TRUE	AluSz6	SINE,Alu
chr1	10519190	T	C	0.00971		.	FALSE	AluSx3	SINE,Alu
chr7	98015394	G	C	0.00118	BAIAP2L1	-	FALSE
chr3	88205579	G	T	2.47620E-05	C3orf38	+	FALSE
chr1	171509327	G	A	0.00110	PRRC2C	+	FALSE
chr1	110136458	A	G	0.00136	GNAI3	+	FALSE
chr17	4930749	A	G	0.00025	KIF1C	+	TRUE	FLAM_A	SINE,Alu
chr9	133579674	A	G	0.00018	EXOSC2	+	TRUE	AluSx3	SINE,Alu
chr2	204055454	T	C	0.00293	NBEAL1	+	FALSE
chr17	73940077	T	C	0.00146	ACOX1	-	TRUE	AluJb	SINE,Alu
chr3	10192608	A	G	0.00245	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	19543247	T	C	4.83051E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr12	56345408	T	G	0.00885	DGKA	+	FALSE
chr9	33624856	C	T	0.00823	ANXA2P2	+	FALSE
chr1	16932429	C	G	0.00823	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	45976268	G	A	0.00168	MMACHC	+	FALSE
chr8	48890109	A	G	0.00750	MCM4	+	TRUE	AluJb	SINE,Alu
chr19	39433140	G	T	0.00260	FBXO17	-	FALSE	AluJb	SINE,Alu
chr1	10520683	T	C	0.00582	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	223967953	C	T	0.00341	TP53BP2	-	FALSE
chr5	74072638	G	A	0.00431	NSA2	+	FALSE
chr1	109605645	T	G	0.00478		.	FALSE	AluY	SINE,Alu
chr1	117644949	C	G	0.00862	TTF2	+	FALSE
chr1	33148196	A	G	0.00756	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr15	65249466	A	G	2.07949E-05	ANKDD1A	+	TRUE	AluSz6	SINE,Alu
chr5	41917697	A	T	0.00051	C5orf51	+	FALSE
chr2	187544218	T	G	0.00796	ITGAV	+	FALSE
chr3	156258255	T	C	0.00059	SSR3	-	TRUE	AluYk3	SINE,Alu
chr2	86249961	T	C	0.00262	LOC90784	-	TRUE	AluJr	SINE,Alu
chr5	70503889	C	A	0.00131		.	FALSE
chr5	125961509	A	G	0.00141	PHAX	+	TRUE	AluSz6	SINE,Alu
chr5	52389817	T	A	0.00868	ITGA2	+	FALSE
chr1	110604747	G	A	0.00101	ALX3	-	FALSE
chr2	37331555	T	C	0.00132		.	FALSE	AluJb	SINE,Alu
chr1	35658211	G	T	1.28982E-07	SFPQ	-	FALSE
chr2	106510202	C	T	0.00854	NCK2	+	FALSE
chr1	19238562	G	A	3.36880E-06	IFFO2	-	FALSE
chr1	117531096	C	T	0.00168	PTGFRN	+	FALSE
chr5	9549459	A	G	0.00783	SNHG18	+	FALSE
chr2	204055625	G	A	0.00426	NBEAL1	+	FALSE
chr19	19791274	A	G	7.64703E-05	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr3	39137793	C	T	0.00363	WDR48	+	FALSE
chr1	241796950	C	A	1.24743E-05	OPN3,CHML	-	FALSE
chr1	9161245	T	C	0.00429		.	FALSE	AluSx	SINE,Alu
chr1	28826150	A	G	0.00048	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr17	57279234	A	G	0.00293	PRR11	+	TRUE	AluSq2	SINE,Alu
chr7	129472355	G	C	0.00246	UBE2H	-	FALSE
chr4	2516791	T	G	4.75740E-05	RNF4	+	FALSE
chr1	245017464	T	A	0.00314	HNRNPU,SNORA100	-	FALSE
chr7	152345392	T	C	0.00643	XRCC2	-	TRUE	AluSx1	SINE,Alu
chr2	217366896	A	G	0.00457		.	FALSE	AluSz6	SINE,Alu
chr11	35017260	T	C	0.00224	PDHX	+	FALSE
chr3	10191943	G	A	2.29886E-07	VHL	+	FALSE
chr1	179084080	T	G	0.00926	ABL2	-	FALSE
chr1	94995411	C	A	0.00849	F3	-	FALSE	AluSx	SINE,Alu
chr1	200521297	C	T	0.00133	KIF14	-	FALSE	(T)n	SINE,Alu
chr1	179042719	A	G	5.24590E-05	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr5	40831098	T	C	3.69541E-05		.	FALSE	AluSx3	SINE,Alu
chr17	80899281	G	A	0.00053	TBCD	+	FALSE
chr3	195404649	A	G	0.00624	SDHAP2	+	FALSE
chr10	15120278	T	C	0.00018	ACBD7	-	TRUE	L1PA7	SINE,Alu
chr3	57612973	T	C	0.00135	DENND6A,PDE12	+,-	FALSE	AluSz	SINE,Alu
chr2	229890660	A	G	0.00596	PID1	-	FALSE
chr9	124094999	G	T	0.00764	GSN	+	FALSE	(TG)n	SINE,Alu
chr17	7760704	A	G	0.00297	NAA38	-	FALSE
chr1	31532312	C	T	0.00215	PUM1	-	FALSE
chr2	162849312	G	C	0.00840	DPP4	-	FALSE
chr4	6675519	A	C	0.00064	LOC105374366	-	FALSE
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr2	234438139	A	G	0.00220	USP40	-	FALSE
chr1	56961756	A	G	0.00682	PLPP3	-	FALSE
chr2	46414708	G	A	0.00155	PRKCE	+	FALSE
chr1	89518120	A	G	0.00453	GBP1	-	FALSE
chr1	11979815	A	C	0.00042	KIAA2013	-	FALSE
chr1	21940555	C	T	0.00907	RAP1GAP	-	FALSE
chr1	24022910	G	A	0.00702	RPL11	+	FALSE
chr5	175803244	A	G	0.00245		.	FALSE	AluSc8	SINE,Alu
chr1	53291420	A	G	0.00795	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	121134204	G	T	0.00557	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr19	11945631	A	G	0.00091	ZNF440	+	TRUE	AluSp	SINE,Alu
chr1	150704413	T	C	0.00236	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	154315369	C	T	0.00022	ATP8B2	+	FALSE
chr1	220231254	T	C	0.00974	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr2	242122440	C	A	0.00354	PPP1R7	+	FALSE
chr1	144822330	C	T	6.80810E-06	NBPF20,NBPF9	+	FALSE
chr1	16889642	T	C	6.70250E-05	NBPF1	-	TRUE
chr1	26755643	A	G	0.00728	LIN28A	+	FALSE	AluSc	SINE,Alu
chr4	17629377	A	G	0.00890		.	FALSE	AluSx3	SINE,Alu
chr1	28564195	T	C	0.00113	ATPIF1	+	FALSE
chr1	54691910	A	G	0.00481	SSBP3	-	FALSE
chr1	24287616	G	A	0.00218	PNRC2	+	FALSE
chr3	49395695	A	C	0.00159	GPX1	-	FALSE
chr7	44918804	T	C	0.00015	PURB	-	TRUE	AluSg	SINE,Alu
chr1	33149373	A	G	0.00918	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	9160900	T	C	0.00256		.	FALSE	AluJb	SINE,Alu
chr6	105546950	T	C	0.00443	BVES	-	TRUE	AluJb	SINE,Alu
chr2	85776621	T	C	0.00194	GGCX	-	TRUE	AluSz6	SINE,Alu
chr1	142688506	T	C	4.54862E-05		.	FALSE
chr2	10923581	C	T	0.00593	ATP6V1C2,PDIA6	+,-	FALSE
chr2	176042871	A	T	0.00204	ATP5G3	-	FALSE
chr20	18468512	T	C	0.00072	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	22352040	G	T	0.00255	LOC101928043,LINC00339	+,-	FALSE
chr1	7980667	T	C	0.00584	TNFRSF9	-	TRUE	AluJb	SINE,Alu
chr17	73819348	T	C	0.00213	UNK	+	FALSE
chr16	88789700	C	T	0.00703	PIEZO1	-	FALSE
chr19	7085418	A	G	6.02730E-06	ZNF557	+	TRUE	AluJb	SINE,Alu
chr1	144521099	A	G	0.00682	NBPF20	+	FALSE
chrM	9988	T	C	0.00011		.	FALSE
chr1	46033514	G	A	0.00073	AKR1A1	+	FALSE	AluYk3	SINE,Alu
chr1	1001422	G	T	0.00998		.	FALSE	LTR13A	SINE,Alu
chr1	28826128	A	G	0.00060	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	16890130	A	C	0.00138	NBPF1	-	FALSE
chr2	197184321	C	T	0.00923	HECW2	-	FALSE
chr9	131872857	C	G	0.00151	CRAT	-	FALSE
chr1	78414308	T	C	0.00024	FUBP1	-	FALSE
chr3	44790759	T	C	0.00744	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	231557255	C	G	0.00056	EGLN1	-	FALSE	(GCC)n	SINE,Alu
chr5	37289051	T	C	0.00014		.	FALSE	AluSp	SINE,Alu
chr3	45960851	C	T	0.00299	FYCO1	-	FALSE
chr2	61278030	A	G	0.00218	PEX13	+	TRUE	AluY	SINE,Alu
chr3	33038221	C	T	0.00379	GLB1	-	FALSE
chr1	28930023	G	A	5.17411E-07	TAF12	-	FALSE
chr1	45244432	T	A	0.00154		.	FALSE
chr1	145511988	A	G	0.00131	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	144607285	A	C	0.00208	NBPF20	+	FALSE
chr3	16301791	G	A	4.37274E-05	DPH3	-	FALSE
chr17	47007752	A	T	0.00029	SNF8	-	FALSE
chr1	33148365	G	C	0.00062	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	20510981	G	C	0.00197	UBXN10-AS1	-	FALSE
chr17	37006249	T	C	0.00774		.	FALSE	AluSx	SINE,Alu
chr1	179326882	A	G	1.03454E-05	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	110040310	A	G	2.45230E-05	CYB561D1	+	FALSE
chr7	105162562	G	C	0.00096	PUS7	-	FALSE
chr12	125511312	A	G	0.00638	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	10520603	T	G	0.00838	DFFA	-	FALSE	AluSc8	SINE,Alu
chr2	103333653	T	C	0.00426	MFSD9	-	FALSE	AluYm1	SINE,Alu
chr4	56294628	T	C	0.00234	CLOCK	-	FALSE
chr7	38764340	T	C	0.00630	VPS41	-	TRUE	AluSp	SINE,Alu
chr2	118854088	C	T	0.00543	INSIG2	+	FALSE
chr1	144606963	G	T	0.00337	NBPF20	+	FALSE
chr1	28825781	A	G	0.00166	PHACTR4	+	TRUE	AluSp	SINE,Alu
chr12	120898728	A	G	0.00566	GATC	+	TRUE	AluY	SINE,Alu
chr1	150446028	G	T	0.00624	RPRD2	+	FALSE
chr6	3022725	T	C	0.00081	HTATSF1P2	-	TRUE	AluSz	SINE,Alu
chr10	102315864	T	A	0.00290		.	FALSE
chr1	28864731	A	G	0.00477	RCC1	+	FALSE
chr2	112252630	A	C	0.00040	MIR4435-2HG	-	FALSE
chr3	42591956	G	A	0.00503	SEC22C	-	FALSE
chr12	133298121	A	G	1.85542E-11	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	45226084	G	A	0.00970	KIF2C	+	FALSE
chr4	2940413	T	C	0.00311	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr8	124262076	G	T	0.00115	ZHX1-C8orf76,ZHX1	-	FALSE
chr7	135291501	T	C	0.00627	NUP205	+	FALSE
chr6	31323203	A	G	2.54151E-09		.	FALSE
chr1	6695423	T	G	9.25675E-05	THAP3,DNAJC11	+,-	FALSE
chr4	101946459	C	T	0.00245	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr1	10520219	T	C	0.00201		.	FALSE	AluSx	SINE,Alu
chr1	36068276	T	C	0.00110	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	28826250	A	G	0.00489	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	201846630	C	A	0.00212	IPO9	+	FALSE	(CA)n	SINE,Alu
chr4	6644391	G	A	0.00000	MRFAP1	+	FALSE
chr8	133837579	G	A	0.00019	PHF20L1	+	FALSE	A-rich	SINE,Alu
chr5	6633042	C	T	0.00348	NSUN2	-	FALSE
chr1	28566320	T	C	0.00309		.	FALSE	AluSx1	SINE,Alu
chr5	37290416	T	C	0.00162		.	FALSE	AluSz	SINE,Alu
chr2	101622881	C	A	1.48865E-05	RPL31	+	FALSE
chr1	6283264	T	C	0.00378	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	109476363	A	G	0.00172	GPSM2,CLCC1	+,-	FALSE
chr1	109818159	G	T	0.00036	CELSR2	+	FALSE
chr1	38326774	T	C	0.00664	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	19585493	A	G	3.52757E-05	MRTO4	+	TRUE	AluSc8	SINE,Alu
chrX	152916235	G	A	0.00015	DUSP9	+	FALSE
chr4	17803604	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	179044174	A	G	0.00410	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	10518733	T	C	0.00399		.	FALSE	AluSx1	SINE,Alu
chr20	3905907	A	G	0.00325	PANK2	+	TRUE	AluSx	SINE,Alu
chr3	44869002	G	T	0.00012	KIF15	+	FALSE
chr1	16909129	T	C	0.00131	NBPF1	-	FALSE
chr1	26774225	A	G	0.00614	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr1	45280109	A	G	0.00251		.	FALSE	AluYk3	SINE,Alu
chr17	73885939	T	C	0.00612	TRIM65	-	TRUE	AluJr	SINE,Alu
chr1	145513031	A	G	0.00713	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	200589540	T	A	0.00151	KIF14	-	FALSE
chr9	125609940	T	A	0.00044		.	FALSE
chr2	64119873	A	T	0.00492	VPS54	-	FALSE
chr4	17802783	T	C	6.83941E-07	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	114940216	T	G	0.00074	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	33409693	G	A	0.00722	RNF19B	-	FALSE
chr3	124688639	C	A	0.00165	HEG1	-	FALSE
chr1	36534024	A	G	0.00635		.	FALSE	FLAM_A	SINE,Alu
chr1	15990929	C	A	0.00202		.	FALSE	AluSx3	SINE,Alu
chr1	144955288	A	G	0.00574	NBPF20,PDE4DIP	+,-	FALSE
chr5	151041883	G	A	0.00343	SPARC	-	FALSE
chr13	73651653	G	T	0.00532	KLF5	+	FALSE
chr8	41798912	T	C	0.00892	KAT6A	-	FALSE
chr17	5288077	G	C	0.00066	RABEP1	+	FALSE
chr2	37331275	T	C	0.00884		.	FALSE	AluSx1	SINE,Alu
chr1	153507176	C	T	0.00957	S100A6	-	FALSE
chr1	113672616	A	G	0.00940		.	FALSE	AluJb	SINE,Alu
chr10	47221465	T	C	0.00201		.	FALSE	AluJb	SINE,Alu
chr5	53840199	G	T	0.00857	SNX18	+	FALSE
chr14	88933002	C	G	0.00459	PTPN21	-	FALSE
chr3	99886662	G	A	0.00011	CMSS1	+	FALSE
chr1	42644770	C	T	1.21495E-06	FOXJ3	-	FALSE
chr2	27293352	A	T	0.00314	AGBL5,OST4	+,-	FALSE
chr1	19199221	C	T	0.00095	ALDH4A1	-	FALSE
chr1	16919961	C	T	0.00133	NBPF1	-	FALSE
chr1	32377391	G	A	0.00439	PTP4A2	-	FALSE
chr1	45976260	C	T	0.00043	MMACHC	+	FALSE
chr1	142449	G	A	0.00073		.	FALSE	MIRb	SINE,Alu
chr2	3609064	G	A	0.00194	RNASEH1-AS1	+	FALSE	MER33	SINE,Alu
chr1	16929100	C	T	0.00348	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr3	169808354	G	A	0.00015	PHC3	-	FALSE
chr1	144932151	G	T	0.00294	NBPF20,PDE4DIP	+,-	FALSE
chr1	169101270	T	G	0.00036	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr6	74303531	T	C	0.00487	SLC17A5	-	TRUE	AluJr	SINE,Alu
chr1	33066859	A	G	0.00403	ZBTB8A	+	TRUE	AluSq4	SINE,Alu
chr1	9328255	A	G	0.00729	H6PD	+	TRUE	AluJr	SINE,Alu
chr2	3592674	C	A	0.00011	RNASEH1	-	FALSE
chr6	114181223	A	G	0.00365	MARCKS	+	FALSE
chr2	68402797	T	A	0.00656	PNO1	+	FALSE
chr1	148241546	G	A	0.00416	NBPF8	-	FALSE	U1	SINE,Alu
chr1	45975584	T	C	0.00327	MMACHC	+	FALSE	AluSx4	SINE,Alu
chr1	201438095	C	G	3.49736E-05	PHLDA3	-	FALSE
chr2	11323276	T	C	0.00219	ROCK2	-	FALSE
chr21	34728215	A	G	0.00153	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr5	79276281	A	G	0.00026	MTX3	-	FALSE
chr1	67874696	T	C	0.00012	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	52306087	C	T	0.00022	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	220323448	C	T	0.00985	RAB3GAP2	-	FALSE
chr1	244869241	C	A	0.00213	DESI2	+	FALSE
chr14	74524774	T	C	0.00481	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr1	245017462	G	A	0.00255	HNRNPU,SNORA100	-	FALSE
chr1	6283305	T	C	0.00129	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	28826118	A	G	0.00948	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	38298419	A	G	0.00575	CYP1B1	-	FALSE
chr1	16932912	T	C	0.00525	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr4	2940371	T	C	0.00905	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr10	75009651	T	C	0.00558	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr1	11084103	T	A	0.00146	TARDBP	+	FALSE
chr8	41400022	A	G	0.00148	LOC102723729,GINS4	+,-	FALSE	AluY	SINE,Alu
chr10	89623858	G	C	0.00086	PTEN	+	FALSE	(CGG)n	SINE,Alu
chr1	19586458	A	G	0.00029	MRTO4	+	TRUE	AluSz	SINE,Alu
chr17	25640295	T	A	0.00154	WSB1	+	FALSE
chr1	228107281	G	A	0.00833		.	FALSE
chr1	204525669	A	G	0.00169	MDM4	+	TRUE	AluSz	SINE,Alu
chr2	152132130	A	G	6.12116E-05	NMI	-	FALSE
chr6	42855057	A	G	0.00034	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	85776508	A	T	0.00747	GGCX	-	FALSE	AluSz6	SINE,Alu
chr1	19984461	C	T	0.00090	MINOS1-NBL1,NBL1	+	FALSE
chr1	201434740	G	A	0.00471	PHLDA3	-	FALSE
chr18	24127008	T	G	0.00800	KCTD1	-	FALSE	(TGG)n	SINE,Alu
chr1	220231338	T	C	0.00762	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr2	219433597	G	A	0.00328	CNOT9	+	FALSE
chr1	28662199	A	G	0.00011	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	144828784	A	G	0.00053	NBPF20,NBPF9	+	FALSE
chr16	10624997	T	C	1.19407E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	148010972	A	G	0.00068	NBPF8	-	FALSE
chr1	22161275	G	A	0.00600	HSPG2	-	FALSE
chr1	179044110	A	G	0.00885	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	203767822	T	G	0.00064	ZC3H11A,ZBED6	+	FALSE
chr11	94903795	G	T	0.00328	SESN3	-	FALSE
chr1	226923264	G	A	0.00046	ITPKB	-	FALSE
chr19	42753034	A	G	0.00883	ERF	-	FALSE
chr1	33068435	A	G	0.00081	ZBTB8A	+	TRUE	AluY	SINE,Alu
chr2	189159003	G	A	0.00260	GULP1	+	FALSE
chr1	117532798	C	G	0.00466	PTGFRN	+	FALSE
chr1	28835847	A	G	5.60567E-05	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr17	45761102	T	G	0.00296		.	FALSE
chr3	63996227	G	T	0.00114	PSMD6-AS2,PSMD6	+,-	FALSE
chr4	153898334	A	G	0.00662	FHDC1	+	FALSE	AluJo	SINE,Alu
chr1	8045340	C	A	0.00285	PARK7	+	FALSE
chr1	145693060	A	G	2.60299E-05	NBPF20,NBPF10	+	TRUE	AluSz6	SINE,Alu
chr1	32799512	A	T	0.00929	MARCKSL1	-	FALSE
chr1	46075709	A	G	0.00431	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	36067760	T	C	0.00203	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	85786299	T	A	0.00502	DDAH1	-	FALSE
chr7	156762446	G	T	0.00162	NOM1	+	FALSE
chr2	128952015	A	G	0.00086	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr3	42592874	T	C	9.28376E-05	SEC22C	-	FALSE	AluJr	SINE,Alu
chr1	175914284	A	G	0.00036	RFWD2	-	FALSE
chr7	140153699	C	A	0.00075	MKRN1	-	FALSE
chr7	44047381	G	A	0.00912	POLR2J4,SPDYE1	+,-	FALSE
chr11	65404866	T	G	0.00664	PCNX3	+	FALSE	(T)n	SINE,Alu
chr1	16928126	G	C	0.00958	NBPF1	-	FALSE	MLT1E3	SINE,Alu
chr1	205320515	A	G	0.00022	KLHDC8A	-	FALSE
chr3	196670095	C	A	1.97381E-07	NCBP2-AS2	+	FALSE
chr1	193055149	A	G	0.00589	TROVE2	+	FALSE
chr16	10623566	T	C	0.00019	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	155695998	A	G	0.00574	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	168218735	A	G	0.00924		.	FALSE	AluSz	SINE,Alu
chr2	91843429	G	A	0.00037	LOC654342	-	FALSE
chr17	74560725	T	C	0.00476	SNHG16	+	FALSE	THE1B	SINE,Alu
chr1	1245100	C	T	0.00656	PUSL1	+	FALSE
chr1	78342729	A	G	0.00175	MIGA1	+	TRUE	FRAM	SINE,Alu
chr1	21780000	G	T	0.00153	NBPF3	+	FALSE	ERVL-E-int	SINE,Alu
chr1	1252309	A	T	0.00403	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr2	128949342	A	G	0.00397	UGGT1	+	TRUE	AluSg	SINE,Alu
chr1	89237556	C	T	0.00840	PKN2	+	FALSE
chr8	12879707	T	G	0.00780	KIAA1456	+	FALSE
chr1	16894514	C	T	0.00348	NBPF1	-	FALSE
chr2	101893244	C	A	0.00332	RNF149	-	FALSE	(A)n	SINE,Alu
chr2	128602500	T	C	4.07621E-06		.	FALSE	AluSq2	SINE,Alu
chr6	150047423	T	C	0.00688	NUP43	-	TRUE	AluSc	SINE,Alu
chr7	44053729	T	C	0.00316	POLR2J4	-	FALSE	AluSg	SINE,Alu
chr1	205583612	C	A	0.00311	ELK4	-	FALSE
chr1	38001685	T	C	0.00050	SNIP1	-	TRUE	AluSx	SINE,Alu
chr17	48771489	T	A	0.00101	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr9	33039686	G	A	0.00542	DNAJA1	+	FALSE
chr11	19184951	G	A	0.00066	ZDHHC13	+	FALSE
chr1	148004548	T	C	0.00220	NBPF8	-	FALSE
chr1	36529419	A	G	0.00842		.	FALSE	AluJr	SINE,Alu
chr3	194124421	A	G	0.00024	ATP13A3	-	FALSE
chr2	24225013	A	G	0.00103		.	FALSE	AluSx	SINE,Alu
chr1	28835847	A	G	0.00042	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr6	31657413	T	C	0.00767		.	FALSE
chr3	188596752	A	G	0.00203	LPP	+	FALSE
chr5	125961647	A	G	1.53189E-07	PHAX	+	FALSE	AluSz6	SINE,Alu
chr19	46289409	C	T	6.23760E-05	DMWD	-	FALSE
chr3	196670098	T	C	0.00019	NCBP2-AS2	+	FALSE
chr14	68117864	A	T	0.00744	ARG2	+	FALSE
chr1	109475543	A	G	0.00495	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	89447856	A	G	0.00465	KYAT3,RBMXL1	-	FALSE
chr11	133689	G	A	0.00856		.	FALSE	AluJb	SINE,Alu
chr1	179044216	A	G	0.00277	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	45975266	A	G	0.00345	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	16893763	T	C	0.00996	NBPF1	-	FALSE
chr1	53291408	A	G	0.00931	ZYG11B	+	TRUE	AluJr	SINE,Alu
chrX	77083548	T	C	0.00205	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr12	80014907	A	T	0.00737	PAWR	-	FALSE
chr2	61277775	A	G	0.00113	PEX13	+	TRUE	AluY	SINE,Alu
chr3	40503555	A	T	0.00177	RPL14	+	FALSE
chr1	31344628	T	A	0.00085	SDC3	-	FALSE
chr5	178224547	A	G	0.00064	AACSP1	-	FALSE
chr1	182360928	A	C	0.00635	GLUL	-	FALSE
chr1	9160982	T	C	0.00350		.	FALSE	AluJb	SINE,Alu
chr9	80333361	C	T	0.00382	GNAQ	-	FALSE
chr8	95805071	A	G	1.12730E-06	DPY19L4	+	TRUE	AluYf1	SINE,Alu
chr1	59121768	G	C	0.00196	MYSM1	-	FALSE
chr12	120898553	A	G	0.00233	GATC	+	TRUE	AluY	SINE,Alu
chr4	165998958	T	C	0.00021	TMEM192	-	TRUE	Alu	SINE,Alu
chr2	223807974	A	T	0.00593	ACSL3	+	FALSE
chr14	31916462	T	C	0.00059	LOC101927124,DTD2	+,-	FALSE	FLAM_C	SINE,Alu
chr1	46117185	C	T	0.00714	GPBP1L1	-	FALSE
chr6	42854611	A	G	0.00541	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	14604	A	G	0.00304	WASH7P	-	FALSE
chr2	37429738	A	G	0.00203	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr3	72426071	T	A	0.00169	RYBP	-	FALSE	(T)n	SINE,Alu
chr1	10520117	T	C	0.00188		.	FALSE	AluSx	SINE,Alu
chr12	125512534	A	G	0.00024		.	FALSE
chr3	33138549	G	A	2.02580E-06	GLB1	-	FALSE
chr1	22854702	C	T	4.66415E-11	ZBTB40	+	FALSE
chr7	6695426	G	T	0.00893	ZNF316	+	FALSE
chr2	71376999	G	A	0.00546	MPHOSPH10	+	FALSE
chr6	31110789	T	C	0.00798		.	FALSE
chr1	16954981	C	A	0.00876	CROCCP2	-	FALSE
chr1	202821382	T	C	0.00983		.	FALSE	AluJr	SINE,Alu
chr1	6283306	T	C	2.62084E-05	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	35319605	A	C	0.00226	SMIM12	-	FALSE	AluSg	SINE,Alu
chr1	200375847	T	G	0.00027	ZNF281	-	FALSE	(T)n	SINE,Alu
chr2	110373919	G	A	0.00669	SOWAHC	+	FALSE
chr2	206986978	T	C	0.00159		.	FALSE	AluJr	SINE,Alu
chr5	76372541	G	C	0.00498	ZBED3	-	FALSE
chr7	56079033	T	C	0.00300	PSPH	-	TRUE	AluYm1	SINE,Alu
chr10	117823569	G	A	0.00391	GFRA1	-	FALSE	(ATC)n	SINE,Alu
chr1	31905887	A	C	4.57629E-05	SERINC2	+	FALSE
chr1	111721354	G	T	0.00616	CEPT1	+	FALSE
chr1	10521238	T	C	0.00096	DFFA	-	TRUE	AluY	SINE,Alu
chr4	165998019	T	C	0.00849	TMEM192	-	TRUE	AluSx	SINE,Alu
chr7	100804430	C	T	0.00629	AP1S1	+	FALSE
chr21	34729969	A	G	0.00077	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr4	57326236	A	G	0.00699	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	145689533	A	G	0.00618	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	93307477	A	G	6.92611E-06	FAM69A,RPL5	+,-	FALSE
chr17	19091395	C	T	0.00852		.	FALSE	U3	SINE,Alu
chr17	41133090	A	T	0.00148	RUNDC1	+	FALSE
chr1	204524846	A	G	0.00940	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	10518921	C	T	0.00398		.	FALSE	AluSx3	SINE,Alu
chr8	128944725	G	C	0.00491	PVT1	+	FALSE
chr5	149363219	A	G	0.00866	SLC26A2	+	FALSE	AluJr	SINE,Alu
chr1	155144757	T	C	0.00758	KRTCAP2	-	FALSE	Tigger19b	SINE,Alu
chr1	204524866	A	G	0.00369	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	9163334	T	C	0.00632		.	FALSE	AluSp	SINE,Alu
chr3	101546847	G	A	0.00665	NXPE3,NFKBIZ	+	FALSE
chr1	148004548	T	C	0.00110	NBPF8	-	FALSE
chr1	213037745	C	G	0.00015	FLVCR1	+	FALSE
chr11	68524809	T	C	0.00129	CPT1A	-	TRUE
chr1	58971831	G	A	0.00801	OMA1	-	FALSE
chr3	39438321	A	T	6.25124E-06	SLC25A38	+	FALSE
chr17	49041866	T	C	0.00153	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	3545194	C	G	0.00044	TPRG1L	+	FALSE
chr9	100777784	T	A	0.00080	ANP32B	+	FALSE
chr3	155658362	C	T	0.00807		.	FALSE	MIR3	SINE,Alu
chr1	36602178	A	T	0.00764	TRAPPC3	-	FALSE
chr1	46159823	T	A	0.00823	TMEM69	+	FALSE
chr1	33148213	A	G	0.00080	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	145689537	A	G	0.00341	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	10518037	T	C	0.00285		.	FALSE	AluJr	SINE,Alu
chr1	161488402	T	A	0.00083	FCGR2A	+	FALSE
chr4	120378207	A	G	8.04303E-06	LOC645513	+	FALSE
chr4	25236017	T	C	2.76644E-09	PI4K2B	+	FALSE
chr1	76229185	T	A	0.00280	ACADM	+	FALSE
chr3	57743171	C	T	1.04824E-07	SLMAP	+	FALSE
chr2	74442407	A	G	0.00122	MTHFD2	+	FALSE
chr19	59095469	A	G	5.44182E-05	CENPBD1P1	+	TRUE	AluJb	SINE,Alu

RBP	ZC3H11A
Knock-Method	CRISPRi
RBP Family	Non-canonical_RBP
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR911BML
Platform	HiSeq
Pubmed ID	32252787

ZC3H11A - Target Gene Network