RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	154179193	A	T	0.00122	C1orf43	-	FALSE
chr1	9161179	T	C	0.00570		.	FALSE	AluSx	SINE,Alu
chr1	54637167	T	C	0.00027		.	FALSE
chr1	31905905	G	C	0.00028	SERINC2	+	FALSE
chr2	128605225	G	A	0.00401	POLR2D	-	FALSE
chr1	204526648	A	G	0.00302	MDM4	+	TRUE	AluSx	SINE,Alu
chr3	195694465	T	C	0.00300	SDHAP1	-	FALSE
chr1	10519936	T	C	0.00607		.	FALSE	AluJr	SINE,Alu
chr1	93298756	T	C	0.00264	FAM69A,RPL5	+,-	FALSE	MER5C	SINE,Alu
chr2	178186556	G	A	0.00917	LOC100130691	-	FALSE
chr6	114178850	G	C	0.00045	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr2	70131584	G	A	0.00366	SNRNP27	+	FALSE
chr5	79923788	T	C	0.00693	DHFR	-	TRUE	AluSp	SINE,Alu
chr5	177019207	T	G	0.00584	TMED9	+	FALSE
chr1	114940209	G	T	0.00177	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	113243096	G	T	0.00114	MOV10	+	FALSE
chr1	10520378	T	C	0.00145		.	FALSE	AluSx1	SINE,Alu
chr1	2160436	C	T	0.00488	SKI	+	FALSE	(CGC)n	SINE,Alu
chr1	3730332	T	C	0.00025	CEP104	-	TRUE	AluSx3	SINE,Alu
chr19	11256672	T	C	9.28647E-11	SPC24	-	TRUE	AluJr4	SINE,Alu
chr19	19792345	A	G	0.00272	ZNF101	+	TRUE	AluJb	SINE,Alu
chr6	157405930	G	A	0.00077	ARID1B	+	FALSE
chr2	37330540	T	C	0.00854		.	FALSE	AluSq2	SINE,Alu
chr1	10519932	T	C	5.00916E-05		.	FALSE	AluJr	SINE,Alu
chr1	203277242	T	C	0.00023	BTG2	+	FALSE
chr2	25962254	A	T	0.00375	ASXL2	-	FALSE
chr1	33148214	A	G	0.00734	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	10520180	T	C	0.00959		.	FALSE	AluSx	SINE,Alu
chr1	45975358	A	G	0.00339	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	65298791	A	T	0.00242	RAVER2	+	FALSE
chr1	28835847	A	G	0.00042	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	184761350	T	C	0.00219	FAM129A	-	TRUE	AluJo	SINE,Alu
chr5	38478062	A	T	0.00914	LIFR	-	FALSE
chr11	118947634	C	T	0.00276	VPS11	+	FALSE
chr8	25272423	G	T	0.00659	DOCK5	+	FALSE
chr1	28261664	T	A	7.89583E-05	SMPDL3B	+	FALSE
chr2	217366626	A	G	0.00057		.	FALSE	AluSz	SINE,Alu
chr1	20977380	T	C	0.00695	PINK1,PINK1-AS	+,-	FALSE
chr1	36067838	T	C	0.00348	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	34906587	T	C	0.00442	RAD1	-	TRUE	AluJo	SINE,Alu
chr7	16823610	T	G	0.00765	TSPAN13	+	FALSE
chr15	30781885	C	T	0.00380		.	FALSE
chr1	10517653	T	C	0.00256		.	FALSE	AluSx1	SINE,Alu
chr1	40974799	T	C	0.00038	EXO5	+	FALSE
chr6	90346418	A	T	1.30335E-05	LYRM2	-	FALSE	AluSz	SINE,Alu
chr1	53291434	A	G	6.17060E-06	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	144614842	C	G	0.00015	NBPF20	+	FALSE
chr1	148252785	T	C	0.00314	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	10042988	A	G	0.00095	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	37429627	A	G	0.00330	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	10517659	T	C	0.00516		.	FALSE	AluSx1	SINE,Alu
chr15	39880822	A	G	0.00281	THBS1	+	FALSE
chr1	176132119	G	C	0.00134	RFWD2	-	FALSE	L3b	SINE,Alu
chr1	146400122	C	G	0.00190	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr15	50648940	C	T	0.00114	GABPB1-AS1	+	FALSE
chr17	5288077	G	C	0.00066	RABEP1	+	FALSE
chr1	220870440	G	A	0.00193	C1orf115	+	FALSE
chr1	1650797	A	G	0.00276	CDK11B,CDK11A	-	FALSE
chr1	54571380	A	G	0.00332	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr8	11701429	T	C	0.00496	CTSB	-	TRUE	AluSx1	SINE,Alu
chr1	10518688	T	C	4.38215E-07		.	FALSE	AluSx1	SINE,Alu
chr11	118880839	A	G	0.00922	CCDC84	+	TRUE	AluJb	SINE,Alu
chr3	195963395	A	G	0.00028		.	FALSE
chr1	6704635	A	G	0.00978	DNAJC11	-	FALSE
chr8	37717121	C	A	0.00087	RAB11FIP1	-	FALSE
chr2	99812988	A	G	0.00700	MRPL30	+	TRUE	AluJb	SINE,Alu
chr6	13788297	T	C	0.00077	MCUR1	-	TRUE	AluSx	SINE,Alu
chr3	14986104	T	C	0.00621	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr8	30643547	T	A	0.00748	PPP2CB	-	FALSE
chr1	36770045	T	C	0.00488	THRAP3	+	FALSE
chr1	245006499	C	G	0.00171	COX20	+	FALSE
chrX	152916230	A	C	1.62471E-05	DUSP9	+	FALSE
chr2	102484488	A	G	0.00192	MAP4K4	+	FALSE
chr1	53250625	T	C	0.00178	ZYG11B	+	FALSE
chr1	55207986	T	A	0.00872	MROH7-TTC4,TTC4	+	FALSE
chrX	123046302	A	G	0.00649	XIAP	+	TRUE	AluJb	SINE,Alu
chr1	9160900	T	C	0.00256		.	FALSE	AluJb	SINE,Alu
chr2	75887834	T	C	0.00024	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr6	17557412	C	T	0.00986	CAP2	+	FALSE
chr3	113370193	C	T	4.09251E-05	USF3	-	FALSE	UCON34	SINE,Alu
chr1	169768080	C	A	0.00980	C1orf112	+	FALSE
chr1	145511796	T	G	0.00428	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	(T)n	SINE,Alu
chr6	31112484	C	T	0.00538		.	FALSE
chr1	10520767	T	C	4.75457E-05	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	16894497	C	T	0.00454	NBPF1	-	FALSE
chr2	113334178	A	T	0.00654	POLR1B	+	FALSE	L1MA10	SINE,Alu
chr1	1667419	A	C	0.00028	SLC35E2	-	FALSE	AluSg	SINE,Alu
chr1	9328120	A	G	0.00386	H6PD	+	TRUE	AluJr	SINE,Alu
chr2	20818517	T	C	0.00748	HS1BP3	-	FALSE
chr1	19542456	T	C	0.00323	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr5	118729619	A	G	0.00586	TNFAIP8	+	FALSE
chr1	26449340	G	A	0.00711	PDIK1L	+	FALSE
chr12	12796592	A	C	0.00801	CREBL2	+	FALSE
chr1	168220535	A	G	0.00665		.	FALSE	AluSz6	SINE,Alu
chr7	6694922	G	C	0.00996	ZNF316	+	FALSE
chr15	38643574	T	C	0.00455	SPRED1	+	FALSE
chr2	101622884	C	A	0.00387	RPL31	+	FALSE
chr1	204189357	C	T	0.00835	PLEKHA6	-	FALSE
chr1	145689025	A	G	0.00541	NBPF20,NBPF10	+	TRUE	AluSc8	SINE,Alu
chr1	53291434	A	G	0.00545	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr5	40826639	A	G	0.00978	LOC100506548	-	FALSE	LTR78	SINE,Alu
chr1	16945227	G	T	0.00353	CROCCP2	-	FALSE
chr2	3592638	T	C	0.00164	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr1	9324213	C	T	0.00063	H6PD	+	FALSE
chr1	113243048	C	T	0.00023	MOV10	+	FALSE
chr1	246829616	T	C	0.00139	CNST	+	FALSE
chr6	42856131	A	G	0.00062	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	171561859	A	T	0.00439	PRRC2C	+	FALSE
chr1	33149399	A	G	0.00148	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	37327677	T	C	0.00019		.	FALSE
chr1	246931057	A	G	0.00048	SCCPDH	+	FALSE
chr1	17287301	A	G	0.00104	CROCC	+	FALSE
chr1	153533813	A	T	0.00451	S100A2	-	FALSE
chr4	1982726	C	T	0.00828	WHSC1	+	FALSE
chr1	109818158	C	T	0.00212	CELSR2	+	FALSE
chr2	37431604	A	G	0.00876	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr5	68936027	G	A	0.00868		.	FALSE
chr15	65249466	A	G	2.07949E-05	ANKDD1A	+	TRUE	AluSz6	SINE,Alu
chr3	149459341	A	G	0.00042	COMMD2	-	FALSE
chr1	10518052	T	C	7.90759E-05		.	FALSE	AluJr	SINE,Alu
chr13	39598616	G	A	2.18804E-06	PROSER1	-	FALSE
chr1	1152601	A	G	0.00075	SDF4	-	FALSE
chr2	217366444	A	G	2.40359E-05		.	FALSE
chr1	155829140	C	G	0.00889	GON4L	-	FALSE
chr1	19542250	T	C	9.94571E-09	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr5	6668842	C	T	4.46208E-05	SRD5A1	+	FALSE
chr8	30536143	T	C	0.00883	GSR	-	TRUE	AluJr	SINE,Alu
chr1	1252513	T	C	0.00043	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	9161199	T	C	0.00468		.	FALSE	AluSx	SINE,Alu
chr2	99812465	A	G	0.00367	MRPL30	+	TRUE	AluSx	SINE,Alu
chr4	170678993	T	C	3.15742E-05	HPF1	-	FALSE
chr19	36260451	A	G	0.00854		.	FALSE	AluY	SINE,Alu
chr12	69237077	A	G	0.00445	MDM2	+	TRUE	(GA)n	SINE,Alu
chr12	56510696	A	T	0.00015	RPL41	+	FALSE
chr4	39551975	T	C	5.31269E-07	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	207942472	A	G	0.00273	CD46	+	TRUE	AluSg4	SINE,Alu
chr3	141012493	C	A	0.00249	PXYLP1	+	FALSE	MER58A	SINE,Alu
chr12	125514120	A	G	0.00232		.	FALSE	(TA)n	SINE,Alu
chr1	148341981	T	C	0.00226	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	116609185	G	A	0.00187	SLC22A15	+	FALSE
chr2	64479079	G	A	0.00452	LOC100507006	+	FALSE
chr12	125511952	A	G	0.00138	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	203839215	T	A	0.00692	SNRPE	+	FALSE
chr5	17276742	G	A	0.00320	BASP1	+	FALSE
chr1	110596569	G	A	0.00867	STRIP1	+	FALSE
chr5	140564263	C	T	0.00475	PCDHB16	+	FALSE
chr19	11256725	T	C	0.00096	SPC24	-	TRUE	AluJr4	SINE,Alu
chr2	217366933	C	T	2.15691E-05		.	FALSE	AluSz6	SINE,Alu
chr1	92862804	A	G	0.00043		.	FALSE	AluJr	SINE,Alu
chr1	160967855	T	C	0.00548	F11R	-	TRUE	AluSp	SINE,Alu
chr1	144932200	G	T	0.00492	NBPF20,PDE4DIP	+,-	FALSE
chr1	23636278	A	T	0.00442	HNRNPR	-	FALSE
chr19	12740463	A	G	0.00120	ZNF791	+	TRUE	AluYh3a3	SINE,Alu
chr5	81571875	A	T	0.00072	RPS23	-	FALSE
chr1	77759578	A	G	0.00404	AK5	+	FALSE
chr19	13054924	A	C	0.00982	CALR	+	FALSE
chr1	184675814	G	A	0.00730	EDEM3	-	FALSE
chr11	93474585	T	G	0.00531	TAF1D	-	FALSE
chr16	22297295	A	G	0.00749	EEF2K	+	TRUE	AluJr	SINE,Alu
chr1	144874760	T	C	0.00267	NBPF20,PDE4DIP	+,-	FALSE
chr1	569981	C	A	4.36771E-05		.	FALSE
chr4	103183510	C	T	0.00718	SLC39A8	-	FALSE
chr2	37431521	A	G	0.00783	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	144932199	C	A	0.00584	NBPF20,PDE4DIP	+,-	FALSE
chr1	244572645	T	G	0.00218	ADSS	-	FALSE
chr1	10520258	T	C	0.00152		.	FALSE	AluSx	SINE,Alu
chr1	45975269	A	G	0.00098	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	109476363	A	G	0.00172	GPSM2,CLCC1	+,-	FALSE
chr1	44443175	A	C	0.00026	ATP6V0B	+	FALSE
chr1	11783889	A	G	0.00746		.	FALSE	AluSq	SINE,Alu
chr1	33148213	A	G	0.00080	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr19	53997266	A	G	0.00173	ZNF813	+	FALSE	L1M3	SINE,Alu
chr1	144594170	C	T	0.00636	NBPF20	+	FALSE
chr1	206566948	G	A	0.00568	SRGAP2	+	FALSE
chr4	10076860	G	A	1.69987E-09	WDR1	-	FALSE
chr13	47345467	G	T	0.00495	ESD	-	FALSE
chr6	149912555	G	A	0.00551		.	FALSE
chr2	217366590	A	G	0.00013		.	FALSE	AluSz	SINE,Alu
chr19	58375157	A	G	0.00408	ZNF587	+	TRUE	AluSx4	SINE,Alu
chr17	57279257	A	G	0.00362	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	38158211	C	T	0.00113	CDCA8	+	FALSE
chr1	145329094	G	C	0.00273	NBPF20,NBPF10	+	FALSE
chr1	145375862	T	C	0.00072	NBPF20,NBPF10	+	FALSE
chr1	104097685	C	T	0.00721	RNPC3,AMY2B	+	FALSE
chr1	16889423	G	C	0.00459	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr6	118029818	T	G	0.00119	NUS1	+	FALSE
chr1	6662500	C	G	0.00235	KLHL21	-	FALSE
chr7	96318078	A	T	0.00790		.	FALSE
chr4	39551008	T	C	0.00106	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	11084103	T	A	0.00968	TARDBP	+	FALSE
chr9	139299673	G	C	0.00710	SDCCAG3	-	FALSE
chr2	24225177	A	G	0.00375		.	FALSE	AluSx	SINE,Alu
chr1	27874481	C	A	0.00046	AHDC1	-	FALSE
chr1	28825370	A	G	0.00617	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	26901090	C	T	0.00952	RPS6KA1	+	FALSE
chr1	223967953	C	T	0.00341	TP53BP2	-	FALSE
chr4	38945689	C	T	1.01800E-05	FAM114A1	+	FALSE	AluSc	SINE,Alu
chr1	19543353	T	C	0.00091	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr6	150047370	T	C	0.00154	NUP43	-	TRUE	AluSc	SINE,Alu
chr1	16889624	T	C	0.00614	NBPF1	-	TRUE
chr2	160625969	T	C	0.00527	LY75-CD302,CD302	-	TRUE	AluSz	SINE,Alu
chr1	201438098	T	G	2.75480E-05	PHLDA3	-	FALSE
chr17	7485341	C	A	0.00701	CD68,LOC100996842	+,-	FALSE
chr1	26608016	G	A	1.44245E-06		.	FALSE
chr1	16841972	G	A	1.76809E-05		.	FALSE	MER41E	SINE,Alu
chr17	38438362	G	A	0.00016	WIPF2	+	FALSE	A-rich	SINE,Alu
chr1	145512073	A	G	0.00066	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	31342374	A	C	0.00446	SDC3	-	FALSE	(A)n	SINE,Alu
chr2	128602462	T	C	0.00298		.	FALSE	AluSq2	SINE,Alu
chr17	5288084	T	A	0.00232	RABEP1	+	FALSE
chr1	36068325	T	C	0.00638	PSMB2	-	TRUE	AluSc	SINE,Alu
chr17	12915009	G	A	0.00219	ELAC2	-	FALSE
chr1	67518534	C	T	0.00682	SLC35D1	-	FALSE
chr1	85020487	C	T	0.00120	SPATA1,CTBS	+,-	FALSE
chr20	18468512	T	C	0.00072	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr2	28002603	C	A	0.00010	MRPL33	+	FALSE
chr1	20826781	C	T	0.00296	MUL1	-	FALSE
chr1	36068276	T	C	0.00067	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	159492107	A	T	0.00332	TTC1	+	FALSE
chr1	21101369	T	C	0.00244	HP1BP3	-	TRUE	AluSc	SINE,Alu
chr8	41401497	A	G	0.00051	LOC102723729,GINS4	+,-	FALSE	AluSq2	SINE,Alu
chr1	569492	T	C	0.00336		.	FALSE
chr22	18572730	A	G	6.64824E-05	PEX26	+	TRUE	AluYf1	SINE,Alu
chr2	217366803	A	G	0.00914		.	FALSE	AluSz6	SINE,Alu
chr5	174955746	G	C	0.00768	SFXN1	+	FALSE
chr1	16889563	C	A	0.00090	NBPF1	-	FALSE
chr12	123253789	A	G	0.00037	DENR	+	TRUE	(AT)n	SINE,Alu
chr2	217366793	A	G	0.00514		.	FALSE	AluSz6	SINE,Alu
chr1	6283264	T	C	0.00479	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	16945027	T	C	0.00819	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr1	19586360	T	C	0.00023	MRTO4	+	FALSE
chr2	238678002	C	G	0.00711	LRRFIP1	+	FALSE
chr1	182568729	C	G	0.00012	RGS16	-	FALSE
chr15	91044379	T	G	0.00440	IQGAP1	+	FALSE
chr2	174828621	A	C	0.00315	SP3	-	FALSE
chr10	89623858	G	C	0.00086	PTEN	+	FALSE	(CGG)n	SINE,Alu
chr17	60522250	A	G	0.00267	METTL2A	+	FALSE
chr3	49396751	T	C	0.00311	RHOA	-	FALSE
chr1	33149496	A	G	0.00662	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr11	60658566	A	C	0.00387	PRPF19	-	FALSE
chr1	38327586	C	T	0.00198	INPP5B	-	FALSE	AluSx3	SINE,Alu
chr1	12058869	C	T	0.00027	MFN2	+	FALSE
chr1	19953132	C	A	0.00910	MINOS1,MINOS1-NBL1	+	FALSE
chr1	205687354	T	C	0.00012	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr2	61416406	T	G	0.00010	USP34	-	FALSE	AluSc8	SINE,Alu
chr8	30536015	T	C	0.00286	GSR	-	TRUE	AluJr	SINE,Alu
chr10	11912065	C	G	0.00191	PROSER2-AS1,PROSER2	+,-	FALSE
chr1	78445292	A	G	7.48186E-07	DNAJB4	+	FALSE
chr1	214525603	A	G	0.00047	PTPN14	-	FALSE
chr5	175811093	A	G	0.00730	NOP16	-	FALSE
chr1	109192051	T	C	0.00124	HENMT1	-	TRUE	AluJr	SINE,Alu
chr2	37328013	T	C	0.00401		.	FALSE
chr20	25428587	A	G	0.00137	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	23636277	A	T	0.00632	HNRNPR	-	FALSE
chr5	96498783	G	A	0.00056	RIOK2	-	FALSE
chr6	42855256	A	G	0.00572	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	184762676	T	C	0.00548	FAM129A	-	TRUE	AluSz	SINE,Alu
chr9	131570178	T	C	0.00767	TBC1D13	+	FALSE
chr1	201845899	G	T	1.72907E-05	IPO9	+	FALSE
chr8	48890109	A	G	8.88178E-16	MCM4	+	TRUE	AluJb	SINE,Alu
chr4	128756632	A	G	0.00072		.	FALSE	AluSx	SINE,Alu
chr1	144822294	G	C	0.00371	NBPF20,NBPF9	+	FALSE
chr1	160967857	T	C	0.00806	F11R	-	TRUE	AluSp	SINE,Alu
chr2	215674224	G	A	9.97816E-05	BARD1	-	FALSE
chr4	57327058	A	G	0.00129	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	236721608	C	T	0.00286	HEATR1	-	FALSE
chr1	10517290	T	C	0.00119		.	FALSE	AluJr	SINE,Alu
chr1	38158705	G	A	0.00168	CDCA8	+	FALSE
chr7	152343700	T	C	0.00061	XRCC2	-	TRUE	AluSx3	SINE,Alu
chr1	32385071	T	A	0.00436	PTP4A2	-	FALSE
chr1	9331254	A	G	0.00793	H6PD	+	TRUE	AluSx	SINE,Alu
chr1	19543353	T	C	0.00377	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	14986471	T	C	3.70393E-05	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	36068325	T	C	0.00746	PSMB2	-	TRUE	AluSc	SINE,Alu
chr19	16661541	T	C	0.00120	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr9	89626839	T	G	0.00016	LOC440173	-	FALSE
chr2	97494866	C	T	0.00069	CNNM3	+	FALSE
chr1	52817504	T	C	0.00934	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr15	28502279	A	G	0.00120	HERC2	-	FALSE
chr1	39989926	T	C	0.00354	BMP8A,PPIEL	+,-	FALSE
chr19	39982631	A	G	0.00316	TIMM50	+	TRUE	AluJr	SINE,Alu
chr1	32669918	G	A	0.00639	CCDC28B	+	FALSE
chr1	40537940	A	C	0.00155	CAP1	+	FALSE	(A)n	SINE,Alu
chr2	128602507	T	C	4.02376E-05		.	FALSE	AluSq2	SINE,Alu
chr15	33064461	C	T	0.00653	FMN1	-	FALSE
chr1	158065762	C	T	0.00310	KIRREL	+	FALSE
chr1	211923085	T	G	0.00674	LPGAT1	-	FALSE
chr1	204520455	T	C	0.00478	MDM4	+	FALSE	AluJb	SINE,Alu
chr3	197611106	A	G	0.00137		.	FALSE	AluSx1	SINE,Alu
chr1	225707044	C	T	1.61826E-07	ENAH	-	FALSE
chr1	36068325	T	C	0.00065	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	9331101	A	G	3.95613E-06	H6PD	+	FALSE	AluSx	SINE,Alu
chr1	53288870	A	G	0.00122	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	120114128	A	C	6.21214E-12	FSTL1	-	FALSE
chr10	70742774	A	T	0.00504	DDX21	+	FALSE
chr2	9629305	A	T	0.00079	ADAM17	-	FALSE
chr3	32524229	G	T	0.00359	CMTM6	-	FALSE
chr4	120979130	T	C	0.00729		.	FALSE	AluSg4	SINE,Alu
chr4	170017406	A	T	0.00534	SH3RF1	-	FALSE
chr1	97543764	C	T	0.00353	DPYD	-	FALSE
chr1	204524840	A	G	0.00557	MDM4	+	TRUE	AluSx	SINE,Alu
chr7	143003526	A	T	0.00050	CASP2	+	FALSE	AluY	SINE,Alu
chr3	52028445	C	T	0.00934	RPL29	-	FALSE
chr1	193222534	G	T	0.00504	CDC73	+	FALSE	(TGT)n	SINE,Alu
chr15	34634033	A	G	0.00939	NOP10	-	FALSE
chr21	34728095	A	G	8.47848E-05	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr5	43290210	A	G	0.00565	HMGCS1	-	FALSE	A-rich	SINE,Alu
chr5	130537761	A	G	0.00947	LYRM7	+	FALSE	AluJb	SINE,Alu
chr1	100361925	G	A	0.00181	AGL	+	FALSE
chr1	570178	G	A	0.00787		.	FALSE
chr1	1684346	G	C	0.00504	NADK	-	FALSE
chr1	87213175	A	T	0.00082	SH3GLB1	+	FALSE
chr9	128729385	C	A	0.00170	PBX3	+	FALSE
chr1	109818161	C	T	0.00840	CELSR2	+	FALSE
chr4	120378207	A	G	8.04303E-06	LOC645513	+	FALSE
chr3	197611095	A	G	0.00694		.	FALSE	AluSx1	SINE,Alu
chr6	109784327	T	C	2.38076E-05	MICAL1,ZBTB24	-	TRUE	AluSg	SINE,Alu
chr3	57199227	A	C	0.00638	IL17RD	-	FALSE
chr1	153599390	T	C	0.00135	S100A13	-	FALSE
chr1	117530213	G	T	0.00256	PTGFRN	+	FALSE
chr1	152552285	C	A	0.00400	LCE3D	-	FALSE
chr2	20097874	T	C	0.00769	TTC32	-	FALSE
chr16	88709698	C	T	0.00330	CYBA	-	FALSE
chr2	25962253	A	T	0.00784	ASXL2	-	FALSE
chr1	79109337	G	T	0.00790	IFI44L	+	FALSE	LTR26	SINE,Alu
chr1	179044174	A	G	0.00410	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	55207983	T	A	0.00018	MROH7-TTC4,TTC4	+	FALSE
chr1	145511988	A	G	0.00131	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	116609833	G	A	0.00012	SLC22A15	+	FALSE
chr2	24224000	A	G	0.00464		.	FALSE	AluSp	SINE,Alu
chr1	113672616	A	G	0.00940		.	FALSE	AluJb	SINE,Alu
chr17	73885939	T	C	0.00612	TRIM65	-	TRUE	AluJr	SINE,Alu
chr1	110276861	T	C	0.00180	GSTM3	-	FALSE	LTR77	SINE,Alu
chr1	168220489	A	G	0.00319		.	FALSE	AluSz6	SINE,Alu
chr8	145159705	G	A	0.00383	MAF1	+	FALSE
chr2	191184475	A	G	0.00895	HIBCH	-	FALSE
chr1	45976723	T	C	0.00366	MMACHC,PRDX1	+,-	FALSE
chr2	74333235	C	T	0.00022	TET3	+	FALSE
chr3	149679162	T	A	0.00235	RNF13	+	FALSE
chr19	42375564	A	G	0.00117		.	FALSE	AluSx	SINE,Alu
chr2	181737842	C	T	0.00350	SCHLAP1	+	FALSE

RBP	PARN
Knock-Method	shRNA
RBP Family	CAF1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR825QXH
Platform	HiSeq
Pubmed ID	32252787

PARN - Target Gene Network