RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr15	41590839	A	G	0.00344	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	116238056	G	A	0.00014	VANGL1	+	FALSE
chr1	26143727	A	T	0.00917	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	6282301	T	C	0.00480	ICMT	-	TRUE	AluSz	SINE,Alu
chr12	133298053	A	G	7.95391E-05	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	26152604	T	C	0.00954	MTFR1L	+	FALSE	AluSz6	SINE,Alu
chr4	84525986	G	T	0.00081	GPAT3	+	FALSE	(TTGTT)n	SINE,Alu
chr15	38645589	A	C	0.00445	SPRED1	+	FALSE
chr7	117832138	G	A	0.00885	LSM8	+	FALSE
chr1	10519982	T	C	6.11297E-05		.	FALSE	AluJr	SINE,Alu
chr1	26611197	C	T	0.00814	UBXN11	-	FALSE
chr3	9519219	C	T	0.00146	SETD5	+	FALSE
chr1	1152310	C	T	0.00862	SDF4	-	FALSE
chr1	205683407	T	A	0.00034	NUCKS1	-	FALSE
chr1	212277584	G	C	0.00997	DTL	+	FALSE
chr8	98736864	T	A	0.00086	MTDH	+	FALSE
chr10	13320111	G	T	0.00571	PHYH	-	FALSE
chr2	48025764	C	T	0.00722	MSH6	+	FALSE
chr1	40214333	A	G	0.00112	PPIE	+	TRUE	AluSq2	SINE,Alu
chr1	109818161	C	T	0.00864	CELSR2	+	FALSE
chr1	138156	G	T	0.00177	LOC729737	-	FALSE
chr1	160967890	T	C	0.00871	F11R	-	TRUE	AluSp	SINE,Alu
chr1	42884086	G	T	0.00040	RIMKLA	+	FALSE
chr1	151288172	G	A	0.00312	PI4KB	-	FALSE
chr1	117531179	G	A	0.00116	PTGFRN	+	FALSE
chr5	41917697	A	T	0.00051	C5orf51	+	FALSE
chr1	201845899	G	T	1.72907E-05	IPO9	+	FALSE
chr9	33046889	T	A	0.00932	SMU1	-	FALSE	AluSz	SINE,Alu
chrX	2825119	T	C	0.00670	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	114940216	T	G	0.00207	TRIM33	-	FALSE	(T)n	SINE,Alu
chr2	74442407	A	G	0.00122	MTHFD2	+	FALSE
chr12	117467580	A	G	0.00064	FBXW8	+	TRUE	AluSz	SINE,Alu
chr12	1611791	C	G	0.00971	LINC00942	+	FALSE
chr5	17276742	G	A	0.00320	BASP1	+	FALSE
chr1	246829616	T	C	0.00029	CNST	+	FALSE
chr1	38279666	C	T	0.00521	MTF1	-	FALSE	(T)n	SINE,Alu
chr1	225678219	T	C	0.00080	ENAH	-	TRUE	AluSx	SINE,Alu
chr1	2160436	C	T	0.00488	SKI	+	FALSE	(CGC)n	SINE,Alu
chr1	67874689	T	C	7.42611E-10	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	197611262	A	G	0.00208		.	FALSE	AluSx1	SINE,Alu
chr1	27877418	G	A	0.00347	AHDC1	-	FALSE
chr1	9163290	T	C	0.00130		.	FALSE	AluSp	SINE,Alu
chr1	22419433	T	G	0.00156	CDC42	+	FALSE
chr1	9643106	A	G	0.00088		.	FALSE	AluSx	SINE,Alu
chr1	10520174	T	C	0.00158		.	FALSE	AluSx	SINE,Alu
chr2	24494638	T	G	0.00495	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr5	135513089	T	A	7.47633E-06	SMAD5	+	FALSE
chr9	85861561	C	T	0.00287	FRMD3	-	FALSE	(TC)n	SINE,Alu
chr1	23636031	T	A	0.00965	HNRNPR	-	FALSE
chr1	51822219	G	A	0.00283	EPS15	-	FALSE
chr6	42856170	A	G	0.00141	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	46269493	G	C	0.00233	MAST2	+	FALSE
chr16	81420621	G	C	0.00214		.	FALSE	L3b	SINE,Alu
chr1	54691921	G	A	0.00010	SSBP3	-	FALSE
chr1	9162933	C	T	0.00088		.	FALSE
chr1	22854702	C	T	5.42952E-11	ZBTB40	+	FALSE
chr5	180236449	G	C	0.00011	MGAT1	-	FALSE
chr13	38936619	G	T	0.00212	UFM1	+	FALSE
chr1	108742632	C	T	0.00933	SLC25A24	-	FALSE
chr1	45975628	A	G	0.00413	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	144594308	G	A	0.00577	NBPF20	+	FALSE
chr17	49042394	T	C	0.00015	SPAG9	-	TRUE	AluJb	SINE,Alu
chr4	155457052	T	A	0.00833	PLRG1	-	FALSE	L2d2	SINE,Alu
chr5	122165503	A	T	0.00170	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	19586520	A	G	0.00659	MRTO4	+	TRUE	AluSz	SINE,Alu
chr8	146200271	T	C	0.00182	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr1	28661657	A	G	0.00011	MED18	+	TRUE	AluSg	SINE,Alu
chr1	114940230	T	G	0.00413	TRIM33	-	FALSE	(T)n	SINE,Alu
chr19	16661431	T	C	0.00017	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr1	1245164	C	T	0.00318	PUSL1	+	FALSE
chr19	39874945	T	C	0.00335	SAMD4B	+	FALSE
chr16	71765443	C	T	0.00223	AP1G1	-	FALSE
chr17	65334856	T	C	1.38810E-06	PSMD12	-	TRUE	AluSq	SINE,Alu
chr5	126113463	A	C	0.00392	LMNB1	+	FALSE	(CGACGCG)n	SINE,Alu
chr2	101622884	C	A	0.00387	RPL31	+	FALSE
chr8	133859871	T	A	0.00027	PHF20L1	+	FALSE
chr1	168220489	A	G	0.00525		.	FALSE	AluSz6	SINE,Alu
chr1	52817434	T	C	0.00799	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	16892277	G	T	0.00021	NBPF1	-	FALSE
chr1	16889864	C	A	0.00598	NBPF1	-	FALSE
chr3	179042866	A	G	0.00806	ZNF639	+	FALSE	AluSp	SINE,Alu
chr3	10192642	A	G	0.00217	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	6282324	T	C	0.00142	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	10521237	T	C	0.00348	DFFA	-	TRUE	AluY	SINE,Alu
chr2	61764895	C	A	0.00862	XPO1	-	FALSE	(AC)n	SINE,Alu
chr1	139233	C	A	0.00653	LOC729737	-	FALSE
chr1	120612168	C	T	0.00607	NOTCH2	-	FALSE
chr1	206566195	C	T	0.00334	SRGAP2	+	FALSE
chr2	132278176	T	G	0.00291	LOC150776	+	FALSE
chr2	101622888	T	A	7.56266E-05	RPL31	+	FALSE
chr1	220231347	T	C	0.00963	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr3	126755134	C	T	0.00920	PLXNA1	+	FALSE
chr2	74442550	A	T	0.00826		.	FALSE
chr7	94297301	G	T	0.00145	PEG10	+	FALSE
chr1	38280010	C	T	0.00990	MTF1	-	FALSE
chr3	30733403	A	T	0.00840	TGFBR2	+	FALSE	(TA)n	SINE,Alu
chr1	29508350	C	T	0.00859	SRSF4	-	FALSE	(GGC)n	SINE,Alu
chr5	179048449	T	G	0.00394	HNRNPH1	-	FALSE
chr3	188597556	A	G	0.00309	LPP	+	FALSE
chr1	12071680	A	G	0.00985	MFN2	+	FALSE
chr1	44447006	T	C	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr1	6282400	T	C	0.00118	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	28662205	C	T	0.00010	MED18	+	FALSE	AluSq2	SINE,Alu
chr12	27953266	G	T	0.00198	KLHL42	+	FALSE
chr1	47840938	A	G	0.00089	CMPK1	+	FALSE
chr16	67715404	T	C	0.00102	GFOD2	-	TRUE	AluSz	SINE,Alu
chr19	47278340	A	G	0.00449	SLC1A5	-	FALSE	(AC)n	SINE,Alu
chr1	567489	T	C	0.00119		.	FALSE
chrX	54587218	A	G	0.00014	GNL3L	+	TRUE	AluSq2	SINE,Alu
chrX	73421601	T	C	0.00219	FTX	-	TRUE	L1MB7	SINE,Alu
chr1	10520331	C	T	2.36721E-05		.	FALSE	AluSx1	SINE,Alu
chr1	120164252	G	A	0.00139	ZNF697	-	FALSE
chr17	42876738	T	C	0.00481	GJC1	-	TRUE	AluSz6	SINE,Alu
chr8	62538200	A	T	0.00552	ASPH	-	FALSE
chr5	171533782	T	C	0.00039	STK10	-	FALSE
chr4	3770069	G	C	0.00018	ADRA2C	+	FALSE
chr1	932618	C	G	0.00569		.	FALSE
chr1	1650832	A	G	0.00263	CDK11B,CDK11A	-	FALSE
chr2	86364707	G	T	0.00131	PTCD3	+	FALSE
chr4	170678993	T	C	3.15742E-05	HPF1	-	FALSE
chr17	42876808	T	C	0.00147	GJC1	-	TRUE	AluSz6	SINE,Alu
chr1	9642832	C	A	0.00082		.	FALSE
chr1	167758262	C	T	0.00663	MPZL1	+	FALSE
chr1	47746678	G	C	0.00374	STIL	-	FALSE
chr1	224302047	C	T	3.20569E-05	FBXO28	+	FALSE
chr4	56237899	A	G	0.00503	SRD5A3,SRD5A3-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	55062960	G	A	0.00542	ACOT11	+	FALSE
chr3	48632596	A	G	0.00666		.	FALSE
chr1	205683408	C	T	0.00082	NUCKS1	-	FALSE
chr7	44841237	T	A	0.00599	PPIA	+	FALSE
chr4	153898736	A	G	0.00574	FHDC1	+	FALSE	AluJb	SINE,Alu
chr1	26143698	T	A	0.00832	SEPN1	+	FALSE
chr1	16933643	A	G	0.00279	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr15	90815787	A	G	0.00055		.	FALSE	FRAM	SINE,Alu
chr3	15114395	T	C	0.00333	RBSN	-	TRUE	AluY	SINE,Alu
chr1	44088568	G	A	0.00274	PTPRF	+	FALSE	A-rich	SINE,Alu
chr8	95804469	A	G	0.00133	DPY19L4	+	TRUE	AluSq2	SINE,Alu
chr1	40537924	G	A	0.00476	CAP1	+	FALSE	(A)n	SINE,Alu
chr3	183900729	T	C	0.00074	AP2M1	+	FALSE	MIR3	SINE,Alu
chr1	110566210	T	A	0.00832	AHCYL1	+	FALSE
chr2	118854108	A	T	0.00568	INSIG2	+	FALSE
chr1	35319605	A	C	0.00226	SMIM12	-	FALSE	AluSg	SINE,Alu
chr2	96934504	T	C	0.00021	CIAO1	+	FALSE
chr1	16958063	C	T	0.00246		.	FALSE
chr1	36067784	T	C	2.18848E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr17	79514129	G	A	0.00164	FAAP100	-	FALSE
chr2	37330476	T	C	2.74271E-05		.	FALSE	AluSq2	SINE,Alu
chr1	25812110	T	C	0.00639	TMEM57	+	FALSE
chr1	75230606	C	T	0.00077	TYW3	+	FALSE
chr3	48787108	T	C	0.00291	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	92862457	A	G	0.00974		.	FALSE	AluSp	SINE,Alu
chr1	45975574	A	G	0.00050	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	1595538	T	C	0.00718	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr1	10517550	T	C	0.00457		.	FALSE	AluSx1	SINE,Alu
chr1	6704652	C	T	1.57063E-06	DNAJC11	-	FALSE
chr5	14397238	T	C	0.00552	TRIO	+	FALSE
chr1	144932151	G	T	0.00294	NBPF20,PDE4DIP	+,-	FALSE
chr1	45975673	A	G	0.00539	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr4	4291825	C	T	1.35815E-09	LYAR	-	FALSE
chr3	141879810	T	C	0.00348	GK5	-	FALSE	AluJr	SINE,Alu
chr1	9163334	T	C	0.00108		.	FALSE	AluSp	SINE,Alu
chr1	33071146	A	G	0.00899	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr15	83826216	C	T	0.00278	HDGFRP3	-	FALSE	(CTT)n	SINE,Alu
chr1	173834149	A	C	0.00265	GAS5	-	FALSE	AluSz	SINE,Alu
chr11	8708789	A	G	0.00237	RPL27A	+	TRUE	AluSp	SINE,Alu
chr1	16945227	G	T	0.00353	CROCCP2	-	FALSE
chr2	39210398	A	T	0.00180	SOS1	-	FALSE
chr2	152334421	A	G	0.00464		.	FALSE	AluSq	SINE,Alu
chr1	6282587	T	C	7.24363E-07	ICMT	-	TRUE
chr1	116239841	A	T	0.00069	VANGL1	+	FALSE
chr1	10519982	T	C	0.00417		.	FALSE	AluJr	SINE,Alu
chr2	37331578	T	C	0.00675		.	FALSE	AluJb	SINE,Alu
chr1	988503	A	T	0.00141	AGRN	+	FALSE
chr4	113152490	G	A	0.00221		.	FALSE
chr5	179720333	A	G	0.00308		.	FALSE
chr2	206986233	T	C	0.00491		.	FALSE	AluSz	SINE,Alu
chr5	177576458	A	T	0.00427		.	FALSE
chr1	35650022	C	A	0.00762	SFPQ	-	FALSE
chr1	9160900	T	C	0.00010		.	FALSE	AluJb	SINE,Alu
chr1	19542250	T	C	3.30618E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	9161365	T	C	4.68504E-05		.	FALSE	AluSx	SINE,Alu
chr1	89522646	G	C	0.00159	GBP1	-	FALSE
chr2	85773623	T	C	0.00203	GGCX	-	TRUE	AluSx1	SINE,Alu
chr2	101622888	T	A	0.00210	RPL31	+	FALSE
chr1	120839743	C	T	0.00647	FAM72B	+	FALSE
chr4	165999188	T	C	0.00751	TMEM192	-	TRUE	FLAM_C	SINE,Alu
chr3	33893987	A	G	0.00123	PDCD6IP	+	FALSE
chr4	17803616	T	C	0.00046	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	120612154	C	G	0.00803	NOTCH2	-	FALSE
chr3	113351702	A	G	0.00042		.	FALSE	7SLRNA	SINE,Alu
chr1	26143727	A	T	0.00602	SEPN1	+	FALSE	AluSx	SINE,Alu
chr3	15296359	C	T	2.99463E-05	SH3BP5,SH3BP5-AS1	+,-	FALSE
chr1	205739266	C	T	0.00125	RAB29	-	FALSE
chr7	128144035	A	G	0.00054		.	FALSE	AluSq2	SINE,Alu
chr4	36121337	T	A	0.00065	ARAP2	-	FALSE
chr5	74324902	C	T	0.00574	GCNT4	-	FALSE
chr1	28661767	A	G	0.00242	MED18	+	TRUE	AluSg	SINE,Alu
chr10	22825288	G	A	0.00051	PIP4K2A	-	FALSE
chr6	42856064	A	G	0.00019	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	36067925	T	C	3.39837E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	46830447	A	C	0.00168	NSUN4	+	FALSE	LTR108a_Mam	SINE,Alu
chr16	48386354	A	G	0.00064	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr6	97592900	C	A	0.00076	MMS22L	-	FALSE
chr3	8922054	T	C	0.00300	RAD18	-	FALSE
chr7	99649179	A	G	0.00360	ZSCAN21	+	TRUE	AluY	SINE,Alu
chr1	145369556	A	G	0.00061	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr4	2940147	T	C	0.00061	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr6	74134673	T	C	0.00340		.	FALSE	AluSz	SINE,Alu
chr6	150047376	T	C	0.00102	NUP43	-	TRUE	AluSc	SINE,Alu
chr8	26435509	T	C	0.00121	DPYSL2	+	FALSE	(TC)n	SINE,Alu
chr1	31351513	G	A	0.00265	SDC3	-	FALSE
chr1	162752670	G	A	0.00594		.	FALSE
chr19	54956254	A	C	0.00417	LENG8-AS1	-	FALSE	MLT2B3	SINE,Alu
chr1	45244421	G	A	0.00925		.	FALSE
chr10	77157784	C	T	0.00027	ZNF503	-	FALSE	(T)n	SINE,Alu
chr1	93297609	C	T	8.96972E-06	RPL5	+	FALSE
chr1	144931727	G	A	4.04936E-05	NBPF20,PDE4DIP	+,-	FALSE
chr17	18111804	T	G	0.00487	ALKBH5	+	FALSE	(TTTTGTT)n	SINE,Alu
chr1	114940209	G	T	0.00177	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	76252687	T	C	0.00021	RABGGTB	+	FALSE
chr7	100279005	C	A	0.00176	GIGYF1	-	FALSE	(A)n	SINE,Alu
chr1	201975173	G	T	0.00356	RNPEP	+	FALSE
chr1	35648842	G	A	0.00015	SFPQ	-	FALSE	AluSx3	SINE,Alu
chr1	40538317	C	A	0.00178	CAP1	+	FALSE
chr13	31033316	T	A	0.00497	HMGB1	-	FALSE
chr1	9644558	A	G	0.00451		.	FALSE	AluSx	SINE,Alu
chr1	3546136	A	G	2.71404E-05	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr4	106767318	A	G	1.71247E-06	GSTCD	+	TRUE	AluJb	SINE,Alu
chr1	158067060	T	A	0.00114	KIRREL	+	FALSE
chr2	70316299	C	A	0.00650	PCBP1	+	FALSE
chr1	28824065	C	T	0.00345	PHACTR4	+	FALSE
chr3	182632684	G	A	0.00116	ATP11B	+	FALSE
chr5	147793406	A	G	0.00323	FBXO38	+	FALSE
chr1	115299504	G	T	0.00067	CSDE1	-	FALSE
chr1	115119377	A	T	0.00157	BCAS2	-	FALSE
chr1	53684924	A	G	0.00913	C1orf123	-	FALSE	L1MA5A	SINE,Alu
chr3	156259340	T	C	0.00070	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	16926980	T	C	0.00062	NBPF1	-	FALSE
chr5	154194459	C	A	0.00556	LARP1	+	FALSE
chr3	25777072	C	T	4.38639E-06	NGLY1	-	FALSE	L1MEg	SINE,Alu
chr4	110971055	A	T	0.00048	ELOVL6	-	FALSE
chr4	2940085	T	C	0.00801	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr3	39453610	C	T	0.00025	RPSA	+	FALSE
chr5	40828062	A	G	0.00733	LOC100506548	-	FALSE
chr19	58356376	A	G	0.00061	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr5	130494984	A	T	0.00018	HINT1	-	FALSE
chr1	120839680	A	C	0.00584	FAM72B	+	FALSE
chr1	51822219	G	A	0.00018	EPS15	-	FALSE
chr1	1683565	G	A	0.00269	NADK	-	FALSE
chr2	272203	C	T	0.00064	ACP1	+	FALSE
chr5	95130802	A	T	0.00123	RHOBTB3	+	FALSE	AluSz	SINE,Alu
chr8	27632073	T	G	0.00013	ESCO2	+	FALSE
chr1	1447756	G	C	0.00354	ATAD3A	+	FALSE
chr3	88191456	C	A	0.00694	CGGBP1,ZNF654	+,-	FALSE
chr16	74656352	T	C	0.00187	RFWD3	-	TRUE	AluJb	SINE,Alu
chr1	43629982	C	T	0.00733	EBNA1BP2	-	FALSE
chr1	204374665	G	A	0.00717	PPP1R15B	-	FALSE
chr1	16889413	T	C	0.00016	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr3	155660961	A	G	6.62819E-05		.	FALSE	AluSz	SINE,Alu
chr2	37329352	T	C	0.00403		.	FALSE	AluJr4	SINE,Alu
chr1	145273345	T	C	0.00190	NBPF20,NOTCH2NL	+	FALSE
chr19	16661541	T	C	0.00120	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr1	212535032	T	G	0.00028	PPP2R5A	+	FALSE
chr1	33148706	A	G	0.00087	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	204526648	A	G	0.00302	MDM4	+	TRUE	AluSx	SINE,Alu
chr15	91044382	A	G	0.00453	IQGAP1	+	FALSE
chr12	76423035	A	G	0.00025	PHLDA1	-	FALSE
chr5	176887511	A	C	0.00662	DBN1	-	FALSE
chr1	27204437	T	C	0.00319		.	FALSE	AluSg7	SINE,Alu
chr5	68858545	C	G	0.00268	GTF2H2C,GTF2H2C_2	+	FALSE	AluSz	SINE,Alu
chr2	101893247	C	A	0.00237	RNF149	-	FALSE	(A)n	SINE,Alu
chr2	46839477	T	C	0.00033	PIGF	-	FALSE
chr1	2303108	T	C	5.78895E-05	MORN1	-	FALSE	AluSp	SINE,Alu
chr5	52388460	A	T	0.00034	ITGA2	+	FALSE
chr7	79848334	G	T	0.00158	GNAI1	+	FALSE
chr1	46828700	A	G	0.00012	NSUN4	+	FALSE
chr12	133298339	A	G	1.45756E-07	PGAM5	+	TRUE	AluSp	SINE,Alu
chr3	183547227	T	C	7.80232E-05	PARL	-	FALSE
chr11	74551853	A	C	0.00079	RNF169	+	FALSE
chr9	46687845	G	C	0.00389	FGF7P6,LOC554249,LOC102724238	+,-	FALSE
chr1	10517952	C	A	0.00341		.	FALSE
chr1	19543349	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	157044418	G	C	0.00707		.	FALSE
chr1	1595006	T	C	0.00156	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	47903063	G	C	0.00292	FOXD2	+	FALSE
chr1	43309548	G	A	0.00764	ERMAP	+	FALSE
chr1	45504720	G	C	0.00759	ZSWIM5	-	FALSE
chr17	5288078	A	G	0.00081	RABEP1	+	FALSE
chr1	10517659	T	C	0.00679		.	FALSE	AluSx1	SINE,Alu
chr3	10285030	G	A	0.00384	IRAK2	+	FALSE
chr1	10517659	T	C	0.00516		.	FALSE	AluSx1	SINE,Alu
chr4	17803537	T	C	7.44979E-05	DCAF16	-	TRUE	AluY	SINE,Alu
chr12	53936878	G	T	0.00036	ATF7	-	FALSE
chr3	137787192	T	C	0.00764	DZIP1L	-	FALSE
chr1	6283434	T	C	4.87712E-06	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	14986150	T	C	7.09959E-07	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	28858860	C	T	0.00213	RCC1	+	FALSE
chr16	10625266	T	C	0.00587	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	93827995	C	T	0.00236	DR1	+	FALSE
chr1	19542401	T	C	0.00052	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	72425248	T	A	0.00281	RYBP	-	FALSE
chr1	160966353	T	C	0.00011	F11R	-	TRUE	AluSg	SINE,Alu
chr2	37334146	T	C	0.00039	EIF2AK2	-	TRUE	AluSz	SINE,Alu
chr2	215674224	G	A	9.97816E-05	BARD1	-	FALSE
chr2	203742126	T	C	0.00451		.	FALSE	AluJb	SINE,Alu
chr12	12796592	A	C	0.00801	CREBL2	+	FALSE
chr1	109181304	C	A	0.00592	FAM102B	+	FALSE
chr2	232028396	A	G	0.00701	PSMD1	+	FALSE
chr2	37328097	T	C	0.00018		.	FALSE
chr3	16301791	G	A	4.37274E-05	DPH3	-	FALSE
chr1	16011005	G	C	0.00616	PLEKHM2	+	FALSE	(GCG)n	SINE,Alu
chr5	174955746	G	C	0.00768	SFXN1	+	FALSE
chr3	169810385	C	T	0.00621	PHC3	-	FALSE
chr1	153507108	A	G	2.72071E-06	S100A6	-	FALSE
chr1	36067838	T	C	0.00348	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	182569291	A	T	0.00979	RGS16	-	FALSE
chr1	36388197	C	T	0.00315	AGO1	+	FALSE
chr1	21940555	C	T	0.00067	RAP1GAP	-	FALSE
chr7	94297293	G	T	0.00573	PEG10	+	FALSE
chr1	109474776	A	G	0.00088	GPSM2,CLCC1	+,-	FALSE	AluSz	SINE,Alu
chr9	96438974	C	G	0.00303	PHF2	+	FALSE	(CTCCAC)n	SINE,Alu
chr11	61732461	G	T	2.02182E-05	FTH1	-	FALSE
chr1	16890071	G	A	0.00246	NBPF1	-	FALSE
chr19	63633	C	T	0.00999	WASH5P	-	FALSE	MLT1K	SINE,Alu
chr8	128944717	G	T	0.00091	PVT1	+	FALSE
chr14	63841400	A	C	0.00122	PPP2R5E	-	FALSE
chr10	120801786	G	C	0.00752	EIF3A	-	FALSE
chr1	114306563	T	A	0.00191	RSBN1	-	FALSE
chr1	9331101	A	G	3.95613E-06	H6PD	+	FALSE	AluSx	SINE,Alu
chr12	72096335	A	G	1.07858E-05	TMEM19	+	FALSE	AluSz6	SINE,Alu
chr8	62626962	C	T	0.00823	ASPH	-	FALSE
chr3	10192827	A	G	1.26958E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	238244963	A	G	0.00124	COL6A3	-	FALSE
chr3	176742501	G	A	0.00707	TBL1XR1	-	FALSE	(A)n	SINE,Alu
chr3	195242996	C	A	0.00136	PPP1R2	-	FALSE
chr1	33086758	T	C	0.00818		.	FALSE	AluY	SINE,Alu
chr1	6475348	C	A	4.73725E-05	HES2	-	FALSE	Tigger1	SINE,Alu
chr1	8413129	G	A	0.00040	RERE	-	FALSE
chr1	10518613	A	T	0.00819		.	FALSE	AluSx1	SINE,Alu
chr2	206986380	T	C	0.00053		.	FALSE	AluSz	SINE,Alu
chr6	31324202	T	A	0.00300		.	FALSE
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr1	244572644	G	C	0.00088	ADSS	-	FALSE
chr16	10625050	T	C	1.54421E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	46075663	A	G	0.00061	NASP	+	TRUE	AluSx4	SINE,Alu
chr16	713251	A	G	0.00628	WDR90	+	TRUE	AluSx	SINE,Alu
chr7	38764358	T	C	0.00675	VPS41	-	TRUE	AluSp	SINE,Alu
chr4	17633798	A	G	0.00053	FAM184B	-	FALSE	AluSz	SINE,Alu
chr3	57549504	A	G	0.00384	PDE12	+	TRUE	AluJb	SINE,Alu
chr5	159520661	T	C	0.00776	PWWP2A	-	FALSE
chr1	93602673	C	T	0.00252	MTF2	+	FALSE
chr14	70838369	T	C	0.00015	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr11	72003767	C	A	0.00297	CLPB	-	FALSE
chr1	145499276	C	T	0.00581	NBPF20,NBPF10,LIX1L	+	FALSE
chr2	99812843	A	G	0.00966	MRPL30	+	TRUE	AluJb	SINE,Alu
chr3	179117241	T	C	0.00133	GNB4	-	TRUE	AluSz	SINE,Alu
chr7	21941586	A	C	0.00016	CDCA7L	-	FALSE
chr1	45975269	A	G	0.00827	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	146650542	A	G	0.00172	PDIA3P1	+	FALSE
chr1	1593857	T	C	0.00424	CDK11B,SLC35E2B	-	FALSE
chr1	144828707	G	T	0.00504	NBPF20,NBPF9	+	FALSE
chr2	112227513	T	C	0.00018	MIR4435-2HG	-	FALSE
chr13	39598616	G	A	2.18804E-06	PROSER1	-	FALSE
chr7	4810530	G	A	0.00236	FOXK1	+	FALSE	(GT)n	SINE,Alu
chr1	1337841	C	A	0.00186	MRPL20	-	FALSE
chr6	42857031	A	G	0.00022	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	226573364	A	G	0.00128	PARP1	-	FALSE
chr1	190234133	A	C	5.13910E-06	BRINP3	-	FALSE
chr1	22852880	G	C	0.00247	ZBTB40	+	FALSE
chr1	145281656	A	T	0.00768	NBPF20,NOTCH2NL	+	FALSE
chr1	19542250	T	C	0.00859	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	74672323	C	A	0.00616	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr1	151095753	A	G	0.00256	GABPB2	+	TRUE	AluSz	SINE,Alu
chr7	6063283	C	T	0.00032	AIMP2,EIF2AK1	+,-	FALSE
chr5	65453894	T	A	0.00211	SREK1	+	FALSE
chr1	114438951	A	G	0.00017	AP4B1-AS1,AP4B1	+,-	FALSE
chr8	145159713	G	C	0.00137	MAF1	+	FALSE
chr2	206983075	T	C	0.00083		.	FALSE	AluJb	SINE,Alu
chr3	88104073	G	C	0.00887	CGGBP1	-	FALSE
chr2	129023282	G	C	0.00170	HS6ST1	-	FALSE
chr1	11979815	A	C	0.00274	KIAA2013	-	FALSE
chr19	4423353	G	A	0.00057	CHAF1A	+	FALSE	GA-rich	SINE,Alu
chr4	39460539	G	A	0.00323	RPL9	-	FALSE
chr2	174090338	A	C	0.00250	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	36068281	T	C	0.00026	PSMB2	-	TRUE	AluSc	SINE,Alu
chr4	119551832	G	A	0.00522	LOC729218	+	FALSE
chr1	117078729	A	G	0.00983	CD58	-	FALSE
chr6	13788342	T	C	0.00454	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	16921146	T	C	0.00353	NBPF1	-	FALSE
chr1	36068369	T	C	0.00207	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	150199123	G	T	0.00625	ANP32E	-	FALSE
chr1	179813613	T	C	7.15786E-05	TOR1AIP2	-	FALSE
chr1	145116141	G	A	0.00266	NBPF20,SEC22B	+	FALSE
chr2	201842323	T	C	0.00254	FAM126B	-	TRUE	AluJb	SINE,Alu
chr2	32235359	A	C	0.00664	MEMO1	-	FALSE
chr1	109818160	T	G	3.82986E-06	CELSR2	+	FALSE
chrX	16781687	A	G	0.00298		.	FALSE	AluSx1	SINE,Alu
chr1	9162929	C	G	0.00584		.	FALSE
chr3	52288956	A	T	0.00042	WDR82	-	FALSE
chr1	6932082	T	A	0.00330	CAMTA1	+	FALSE
chr1	74672640	T	A	0.00011	FPGT-TNNI3K,FPGT	+	FALSE
chr5	159492103	T	G	0.00332	TTC1	+	FALSE
chr1	28826128	A	G	0.00060	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr17	38788606	G	T	1.11022E-15	SMARCE1	-	FALSE
chr1	155161736	G	A	0.00088	MUC1	-	FALSE
chr1	19232017	T	G	0.00723	IFFO2	-	FALSE
chr1	117945049	G	A	0.00030	MAN1A2	+	FALSE
chr4	57796757	G	A	0.00011	REST	+	FALSE
chr19	53914807	A	G	4.44644E-06	ZNF765	+	TRUE	AluSp	SINE,Alu
chr10	33189606	A	G	0.00011	ITGB1	-	FALSE
chr1	28567501	A	G	0.00887		.	FALSE
chr10	24873171	G	T	0.00329	ARHGAP21	-	FALSE
chr2	99772813	A	G	1.48642E-06	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr1	67874689	T	C	0.00146	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	109746825	A	G	0.00281	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr2	191556847	G	T	9.96724E-06	NAB1	+	FALSE
chr19	39669600	A	G	0.00619	PAK4	+	FALSE	(TG)n	SINE,Alu
chr1	200375835	G	T	0.00063	ZNF281	-	FALSE	(T)n	SINE,Alu
chr15	42503333	T	C	0.00120	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr1	156692054	A	T	0.00471	ISG20L2	-	FALSE	AluY	SINE,Alu
chr4	6644457	G	A	0.00059	MRFAP1	+	FALSE
chr9	131872862	C	G	0.00131	CRAT	-	FALSE
chr17	80280865	G	A	0.00984	SECTM1	-	FALSE
chr2	37429737	A	G	3.16512E-05	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr2	112252629	A	C	0.00107	MIR4435-2HG	-	FALSE
chr7	2290522	C	T	0.00517	NUDT1	+	FALSE
chr1	145281543	C	T	0.00031	NBPF20,NOTCH2NL	+	FALSE
chr3	58306638	A	G	0.00988		.	FALSE	AluSz	SINE,Alu
chr4	185397529	A	G	0.00116		.	FALSE	FRAM	SINE,Alu
chr1	19543349	T	C	2.12419E-08	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr9	14810	C	G	0.00709	WASH1	-	FALSE
chr2	191067766	T	C	0.00034	C2orf88	+	FALSE
chr2	114513901	C	T	0.00655	SLC35F5	-	FALSE
chr1	52817432	T	C	0.00518	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	19542621	T	C	1.78455E-05	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr8	42883403	A	G	0.00204	HOOK3	+	TRUE	AluJb	SINE,Alu
chr7	65618876	A	G	0.00817	CRCP	+	TRUE	AluSx3	SINE,Alu
chr2	233744021	G	A	0.00460	NGEF	-	FALSE
chr1	6583383	T	C	0.00305	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	24864008	A	G	0.00601		.	FALSE
chr12	100562935	G	T	0.00074	GOLGA2P5	-	FALSE	AluSg	SINE,Alu
chr12	54634284	T	C	0.00247	CBX5	-	TRUE	AluJr	SINE,Alu
chr17	416890	C	T	0.00231	VPS53	-	FALSE
chr1	246931057	A	G	0.00048	SCCPDH	+	FALSE
chr2	174128513	C	T	0.00069	ZAK,MLK7-AS1	+,-	FALSE
chr4	36121334	C	G	0.00057	ARAP2	-	FALSE
chr1	46076468	A	G	3.83065E-05	NASP	+	TRUE	AluSx	SINE,Alu
chr3	170021210	C	A	0.00015	PRKCI	+	FALSE
chr1	16890428	T	A	0.00233	NBPF1	-	FALSE
chr3	194369580	C	A	0.00042	LSG1	-	FALSE
chr6	28873868	T	C	0.00041		.	FALSE	AluJo	SINE,Alu
chr2	120980896	T	G	0.00132	TMEM185B	-	FALSE
chr17	41144250	G	T	0.00025	RUNDC1	+	FALSE
chr2	85772408	G	A	0.00278	GGCX	-	FALSE

RBP	TUFM
Knock-Method	shRNA
RBP Family	GTP_EFTU
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR602AWR
Platform	HiSeq
Pubmed ID	32252787

TUFM - Target Gene Network