RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr4	17802819	T	C	0.00316	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	116947126	C	A	4.37114E-09	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr1	16946266	G	C	0.00750	CROCCP2	-	FALSE	MIRb	SINE,Alu
chr19	59095456	A	G	0.00125	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr10	75009651	T	C	0.00558	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr19	42375564	A	G	0.00117		.	FALSE	AluSx	SINE,Alu
chr12	69159400	G	A	0.00173	SLC35E3	+	FALSE	(AT)n	SINE,Alu
chr1	10521238	T	C	0.00793	DFFA	-	TRUE	AluY	SINE,Alu
chr17	29578724	C	T	0.00514	NF1	+	FALSE
chr1	52520866	C	T	0.00108	TXNDC12	-	FALSE
chr1	67875026	A	T	0.00557	SERBP1	-	FALSE
chr3	186838874	G	A	0.00972	RPL39L	-	FALSE
chr2	85776987	T	A	0.00059	GGCX	-	FALSE
chr1	67451521	A	T	0.00049	MIER1	+	FALSE
chr3	196558328	A	G	1.33227E-14	PAK2	+	FALSE
chr1	19543457	T	C	0.00012	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr14	61112736	T	G	0.00418	SIX1	-	FALSE	(T)n	SINE,Alu
chr1	46049716	T	G	0.00761	NASP	+	FALSE
chr1	16912085	T	C	0.00206	NBPF1	-	FALSE
chr1	1662754	T	C	0.00856	SLC35E2	-	TRUE	AluY	SINE,Alu
chr4	17803537	T	C	0.00366	DCAF16	-	TRUE	AluY	SINE,Alu
chr19	29703961	A	C	0.00226	UQCRFS1	-	FALSE
chr1	78029905	T	A	0.00256	ZZZ3	-	FALSE
chr2	69548320	C	T	7.68354E-05	GFPT1	-	FALSE
chr9	28403	G	T	1.21037E-06	WASH1	-	FALSE	MIR	SINE,Alu
chr2	47387305	G	T	0.00322	CALM2	-	FALSE
chr5	79923293	T	C	0.00039	DHFR	-	TRUE	AluJr	SINE,Alu
chr9	116139063	G	C	0.00321	HDHD3	-	FALSE
chr3	194361676	C	T	0.00378	LSG1	-	FALSE	MSTA	SINE,Alu
chr5	156905300	A	C	0.00870	ADAM19	-	FALSE	MER92B	SINE,Alu
chr5	37290554	T	C	0.00010		.	FALSE	AluSz	SINE,Alu
chr1	25169634	A	G	0.00843	CLIC4	+	FALSE
chr1	145500918	T	C	0.00127	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	1169973	G	A	0.00783	B3GALT6	+	FALSE
chr4	128756737	A	G	8.66859E-06		.	FALSE	AluSx	SINE,Alu
chr1	15993013	G	A	1.16652E-10		.	FALSE
chr9	132268259	A	G	0.00032	LINC00963	+	TRUE	AluJb	SINE,Alu
chr1	21810693	A	G	0.00370	NBPF3	+	FALSE	L1MC4	SINE,Alu
chr8	17796338	G	T	4.50000E-10	PCM1	+	FALSE
chr2	24225542	A	G	0.00348		.	FALSE	AluSq2	SINE,Alu
chr1	16890428	T	A	1.76753E-05	NBPF1	-	FALSE
chr7	102016321	C	T	0.00201	LOC100289561,LOC100630923	+	FALSE
chr1	1593857	T	C	0.00217	CDK11B,SLC35E2B	-	FALSE
chr1	16945780	C	T	0.00034	CROCCP2	-	FALSE
chr3	124948045	G	C	0.00784	ZNF148	-	FALSE
chr1	161559466	C	A	0.00491	FCGR2C	+	FALSE
chr2	102508658	T	A	0.00275	MAP4K4	+	FALSE
chr3	10005159	A	T	0.00939	EMC3	-	FALSE	(AT)n	SINE,Alu
chr14	19686329	G	A	0.00117	DUXAP10	+	FALSE
chr4	3769307	C	A	0.00173	ADRA2C	+	FALSE
chr5	130537666	A	G	0.00329	LYRM7	+	TRUE	AluJb	SINE,Alu
chr8	117784431	T	A	0.00422	UTP23	+	FALSE	AluSz6	SINE,Alu
chr2	85773376	T	C	0.00607	GGCX	-	TRUE	AluY	SINE,Alu
chr19	18475303	A	G	0.00757	PGPEP1	+	TRUE	AluSx1	SINE,Alu
chr12	56510704	G	A	0.00042	RPL41	+	FALSE
chr1	231377081	C	T	0.00895	GNPAT	+	FALSE
chr5	32124827	G	T	0.00047	GOLPH3	-	FALSE
chr2	170607000	T	A	0.00590	PHOSPHO2-KLHL23,KLHL23	+	FALSE
chr1	36067752	T	C	0.00123	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	179044206	A	G	0.00015	FAM20B	+	TRUE	AluSx	SINE,Alu
chr15	90819423	A	G	3.09408E-05		.	FALSE	AluSx	SINE,Alu
chr19	57816349	A	G	8.96695E-06		.	FALSE	AluY	SINE,Alu
chr1	169101257	A	T	0.00144	ATP1B1	+	FALSE
chr1	6697343	C	T	0.00054	DNAJC11	-	FALSE
chr2	202031806	A	T	0.00543	CFLAR	+	FALSE
chr1	218617543	G	A	0.00291	TGFB2	+	FALSE
chr8	30536410	T	C	3.13735E-05	GSR	-	TRUE	AluSp	SINE,Alu
chr2	132278176	T	G	0.00291	LOC150776	+	FALSE
chr1	108742632	C	T	0.00933	SLC25A24	-	FALSE
chr15	38780594	C	T	0.00135	RASGRP1	-	FALSE
chr1	45975345	A	G	0.00227	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	567557	A	G	0.00649		.	FALSE
chr1	148251875	T	C	0.00436	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	45976723	T	C	0.00340	MMACHC,PRDX1	+,-	FALSE
chr1	19984109	T	G	0.00872	MINOS1-NBL1,NBL1	+	FALSE
chr1	183105705	G	A	0.00074	LAMC1	+	FALSE
chr1	109180686	C	T	1.31584E-05	FAM102B	+	FALSE
chr3	141012493	C	A	0.00249	PXYLP1	+	FALSE	MER58A	SINE,Alu
chr2	204055626	G	T	0.00130	NBEAL1	+	FALSE
chr3	88104167	T	C	0.00919	CGGBP1	-	FALSE
chr2	238678002	C	G	0.00711	LRRFIP1	+	FALSE
chr1	109818162	T	C	0.00253	CELSR2	+	FALSE
chr1	183876182	C	T	0.00494	RGL1	+	FALSE
chr1	56961756	A	G	0.00265	PLPP3	-	FALSE
chr3	48632596	A	G	0.00666		.	FALSE
chr1	10519200	T	C	0.00059		.	FALSE	AluSx3	SINE,Alu
chr1	150969257	T	C	0.00400		.	FALSE	AluSq2	SINE,Alu
chr1	36068369	T	C	5.31121E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	1570919	C	T	0.00161	CDK11B	-	FALSE
chr1	204524840	A	G	0.00557	MDM4	+	TRUE	AluSx	SINE,Alu
chr15	83659319	A	T	0.00130	FAM103A1,C15orf40	+,-	FALSE
chr1	86049362	C	A	0.00140	CYR61	+	FALSE
chr5	40828076	C	A	0.00900	LOC100506548	-	FALSE
chr1	52383255	T	C	0.00708	RAB3B	-	FALSE	AluJr	SINE,Alu
chr1	23636277	A	T	0.00295	HNRNPR	-	FALSE
chr1	28261654	T	G	0.00574	SMPDL3B	+	FALSE
chr13	50273970	C	T	1.77946E-05	KPNA3	-	FALSE
chr8	25272446	A	T	0.00405	DOCK5	+	FALSE
chr3	105294534	A	G	1.10929E-06	ALCAM	+	FALSE
chr1	1595586	T	C	0.00206	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	144618144	A	G	0.00725	NBPF20,NBPF9	+	FALSE
chr3	57126614	C	T	0.00358	IL17RD	-	FALSE	AluY	SINE,Alu
chr10	61548857	C	A	0.00046	CCDC6	-	FALSE
chr16	10623666	T	C	1.68352E-07	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	9160963	T	C	0.00098		.	FALSE	AluJb	SINE,Alu
chr2	158170017	T	C	0.00662	GALNT5	+	FALSE
chr5	31554098	G	T	2.66454E-15	C5orf22	+	FALSE
chr1	38326700	T	C	5.61462E-05	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	19542463	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	101442211	T	C	0.00590	SLC30A7	+	FALSE
chr1	165631670	T	G	0.00197	ALDH9A1	-	FALSE
chr1	118167524	C	T	0.00902	FAM46C	+	FALSE
chr6	57034842	T	G	0.00581	ZNF451,LOC101927211	+,-	FALSE
chr1	87170493	T	G	0.00345	SH3GLB1	+	FALSE
chr3	109049163	A	G	0.00440	DPPA4	-	FALSE	AluSp	SINE,Alu
chr7	99649179	A	G	0.00360	ZSCAN21	+	TRUE	AluY	SINE,Alu
chr1	10521237	T	C	0.00200	DFFA	-	TRUE	AluY	SINE,Alu
chr8	38829839	A	G	0.00184	PLEKHA2	+	TRUE	AluJr4	SINE,Alu
chr16	48386354	A	G	0.00064	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr19	39981168	A	G	0.00446	TIMM50	+	TRUE	AluJr	SINE,Alu
chr1	53292875	G	T	8.43181E-07	ZYG11B	+	FALSE
chr5	172396725	T	A	0.00014	RPL26L1	+	FALSE
chrX	123047170	A	G	0.00855	XIAP	+	FALSE	AluSx	SINE,Alu
chr1	16958063	C	T	0.00246		.	FALSE
chr19	19792345	A	G	0.00272	ZNF101	+	TRUE	AluJb	SINE,Alu
chr2	91805938	A	G	0.00084		.	FALSE	MLT1H1	SINE,Alu
chr1	207250570	A	G	0.00486	PFKFB2	+	FALSE
chr2	24225006	A	G	0.00277		.	FALSE	AluSx	SINE,Alu
chr1	22418122	T	C	0.00790	CDC42	+	FALSE
chr1	10043002	A	G	0.00247	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	77759578	A	G	0.00404	AK5	+	FALSE
chr2	74442407	A	G	0.00122	MTHFD2	+	FALSE
chr1	143186597	G	A	0.00644	LOC102723769	-	FALSE
chr6	42856157	A	G	0.00081	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr3	15483830	A	G	3.44106E-05	EAF1	+	FALSE
chr11	68523567	T	C	0.00079	CPT1A	-	TRUE	AluSq	SINE,Alu
chr19	39669597	T	C	0.00610	PAK4	+	FALSE	(TG)n	SINE,Alu
chr10	120801785	T	A	0.00665	EIF3A	-	FALSE
chr5	41917695	C	T	0.00019	C5orf51	+	FALSE
chr20	18468351	T	C	0.00169	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	16524869	T	C	0.00164	ARHGEF19	-	FALSE
chr1	24796069	A	C	0.00403	NIPAL3	+	FALSE
chr1	36068276	T	C	0.00067	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	99812429	A	G	0.00504	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	1668168	G	T	0.00344	SLC35E2	-	FALSE	AluSz	SINE,Alu
chr11	94801632	C	A	0.00194	SRSF8	+	FALSE
chr2	85824711	G	A	0.00198	RNF181	+	FALSE
chr4	40138676	A	G	0.00157	N4BP2	+	FALSE
chr5	43575009	T	C	0.00498	NNT-AS1	-	TRUE	AluSq2	SINE,Alu
chr2	176791759	A	C	0.00232	LNPK	-	FALSE	L2b	SINE,Alu
chr2	74333231	C	T	0.00073	TET3	+	FALSE
chr1	214529725	T	C	0.00535	PTPN14	-	TRUE
chr1	212273639	C	T	0.00710	DTL	+	FALSE
chr3	88103602	C	A	0.00284	CGGBP1	-	FALSE
chr1	40537937	A	C	0.00091	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	16889004	C	T	0.00977	NBPF1	-	FALSE
chr1	67874689	T	C	1.72813E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	32508397	T	C	0.00166	KHDRBS1	+	FALSE
chr4	248713	A	G	0.00367	ZNF876P	+	FALSE
chr5	159492107	A	T	0.00332	TTC1	+	FALSE
chr1	184762676	T	C	0.00548	FAM129A	-	TRUE	AluSz	SINE,Alu
chr11	31452750	A	G	0.00326	DNAJC24	+	TRUE	AluSx1	SINE,Alu
chr16	80636808	C	T	0.00881	CDYL2	-	FALSE
chr16	10625406	T	C	1.26372E-11	EMP2	-	TRUE	AluSx	SINE,Alu
chr16	10625101	T	C	0.00804	EMP2	-	TRUE	AluSx3	SINE,Alu
chr6	41888827	C	G	0.00936	MED20	-	FALSE
chr13	52952680	G	A	7.53266E-06	THSD1	-	FALSE
chr2	91806132	T	A	0.00460		.	FALSE	MLT1H1	SINE,Alu
chr6	31112484	C	T	0.00538		.	FALSE
chr3	45960558	C	T	6.37727E-08	FYCO1	-	FALSE
chr3	63997896	G	A	0.00301	PSMD6-AS2,PSMD6	+,-	FALSE
chr22	18571477	A	G	4.57932E-05	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	36067838	T	C	0.00081	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	172411768	T	C	0.00416	C1orf105,PIGC	+,-	FALSE
chr2	201774393	T	C	0.00971		.	FALSE	AluSz	SINE,Alu
chr5	72801321	T	A	0.00280	BTF3	+	FALSE
chr21	9909176	C	A	0.00850	TEKT4P2	-	FALSE
chr21	40195059	A	G	0.00817	ETS2	+	FALSE
chr12	133298417	A	G	6.66134E-16	PGAM5	+	TRUE	AluSp	SINE,Alu
chr6	44417136	A	G	0.00644	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr17	79674375	C	T	0.00129	MRPL12	+	FALSE
chr1	1653046	T	A	0.00686	CDK11B,CDK11A	-	FALSE
chr17	49041692	T	C	2.35976E-05	SPAG9	-	TRUE	AluSx	SINE,Alu
chr1	36642420	T	C	9.55653E-06	MAP7D1	+	FALSE
chr12	120898553	A	G	0.00233	GATC	+	TRUE	AluY	SINE,Alu
chr3	41281407	G	T	0.00011	CTNNB1	+	FALSE
chr1	59124223	G	A	0.00256	MYSM1	-	FALSE	MIR3	SINE,Alu
chr17	1946503	C	G	0.00154	DPH1,OVCA2	+	FALSE
chr1	109192051	T	C	0.00124	HENMT1	-	TRUE	AluJr	SINE,Alu
chr1	1594977	T	C	0.00487	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	1718810	G	A	5.85228E-05	GNB1	-	FALSE
chr19	36260451	A	G	0.00854		.	FALSE	AluY	SINE,Alu
chr1	229631734	T	C	0.00611	NUP133	-	FALSE
chr12	121769840	T	C	0.00499	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr16	81420621	G	C	0.00214		.	FALSE	L3b	SINE,Alu
chr1	169768080	C	A	5.53708E-05	C1orf112	+	FALSE
chr1	1595500	T	C	0.00845	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr2	152334349	A	G	0.00171		.	FALSE	AluSq	SINE,Alu
chr3	196080624	T	C	0.00795	UBXN7	-	TRUE	AluSx	SINE,Alu
chr1	26887592	T	C	0.00354	RPS6KA1	+	FALSE
chr3	156259288	T	C	0.00072	SSR3	-	TRUE	AluSq2	SINE,Alu
chr2	71411977	T	A	0.00468	PAIP2B	-	FALSE
chr1	93297607	C	T	0.00016	RPL5	+	FALSE
chr2	183643905	A	T	0.00113	DNAJC10	+	FALSE
chr5	180001389	G	A	0.00138	CNOT6	+	FALSE
chr1	109605647	G	A	0.00019		.	FALSE	AluY	SINE,Alu
chr1	16952298	A	C	2.15086E-05	CROCCP2	-	FALSE
chr13	21547679	A	G	0.00233	LATS2	-	FALSE
chr1	45244414	T	A	0.00456		.	FALSE
chr1	87379493	G	A	0.00353	SEP15	-	FALSE
chr1	26604691	G	C	0.00043	CEP85	+	FALSE
chr3	49131374	G	C	0.00905	QRICH1	-	FALSE	(CCG)n	SINE,Alu
chr19	11945631	A	G	0.00091	ZNF440	+	TRUE	AluSp	SINE,Alu
chr2	101010038	G	A	0.00339	CHST10	-	FALSE
chr1	146495577	T	A	0.00072	LOC728989	-	FALSE
chr1	67874689	T	C	0.00338	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr2	37327702	T	C	0.00519		.	FALSE
chr1	10520669	T	C	0.00022	DFFA	-	FALSE	AluSc8	SINE,Alu
chr3	12613866	T	C	0.00043	MKRN2	+	FALSE
chr4	129795661	A	T	0.00165	JADE1	+	FALSE
chr17	73940888	T	C	2.69053E-06	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr1	16344402	G	A	0.00168	HSPB7	-	FALSE	L3	SINE,Alu
chr1	16889596	T	C	0.00640	NBPF1	-	TRUE
chr12	12967264	C	G	0.00781	DDX47	+	FALSE
chr2	132049924	A	G	0.00338	LOC440910	+	FALSE	AluSg4	SINE,Alu
chr1	153643449	G	C	0.00704	ILF2	-	FALSE
chr6	42855962	A	G	0.00781	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	145689601	A	G	0.00517	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	100361925	G	A	0.00181	AGL	+	FALSE
chr1	22855441	C	T	0.00884	ZBTB40	+	FALSE
chr1	179042692	A	G	0.00707	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr16	74698535	T	C	0.00607	RFWD3	-	TRUE	AluSx3	SINE,Alu
chr1	10521170	T	C	0.00104	DFFA	-	TRUE	AluY	SINE,Alu
chr1	212587320	T	C	0.00023	TMEM206	-	FALSE
chr1	15909744	C	T	0.00225	AGMAT	-	FALSE
chr15	90820082	A	G	0.00297		.	FALSE	AluY	SINE,Alu
chr12	98942805	A	G	0.00058	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	35649749	C	A	0.00597	SFPQ	-	FALSE
chr2	64327544	G	T	0.00917	PELI1	-	FALSE
chr1	53291435	A	G	0.00044	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	19934930	T	C	0.00026	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr6	42856917	A	G	0.00280	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	37331037	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr2	219433597	G	A	0.00328	CNOT9	+	FALSE
chr21	34728068	A	G	0.00188	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr2	220422583	G	A	0.00089	OBSL1	-	FALSE
chr7	75958140	C	A	0.00090	YWHAG	-	FALSE
chr1	22357435	A	C	0.00454	LINC00339	+	FALSE
chr15	41590932	A	G	0.00055	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	110173775	G	T	0.00038	AMPD2	+	FALSE
chr4	120979190	T	C	0.00970		.	FALSE	AluSg4	SINE,Alu
chr6	36894341	G	A	0.00575	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr1	16952481	A	G	0.00093	CROCCP2	-	FALSE
chr6	149912307	A	G	0.00026		.	FALSE	AluSc	SINE,Alu
chr4	190878580	A	G	0.00097	FRG1	+	FALSE
chr8	144940798	T	C	0.00255	EPPK1	-	FALSE
chr9	136209399	A	T	0.00011	MED22	-	FALSE
chr17	17971644	G	T	0.00154	GID4	+	FALSE
chr1	92862682	A	G	0.00381		.	FALSE	AluJr	SINE,Alu
chr1	33149333	A	G	0.00980	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	120113286	C	T	1.47726E-06	FSTL1	-	FALSE
chr3	156259331	T	C	0.00088	SSR3	-	TRUE	AluSq2	SINE,Alu
chr4	144475125	T	G	0.00133	SMARCA5	+	FALSE
chr1	28836975	A	G	0.00202	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr8	140475147	C	T	0.00719		.	FALSE
chr2	37330146	C	G	2.68632E-05		.	FALSE
chr3	98307696	T	G	3.25383E-09	CPOX	-	FALSE
chr5	43380781	T	C	0.00739	CCL28	-	TRUE	AluJb	SINE,Alu
chr1	10519973	T	C	0.00586		.	FALSE	AluJr	SINE,Alu
chr1	54231847	A	C	0.00097	NDC1	-	FALSE
chr1	2520435	G	C	0.00041	FAM213B	+	FALSE
chr3	129033736	T	C	0.00309	H1FX	-	FALSE
chr9	89627066	A	G	0.00588	LOC440173	-	FALSE
chr15	63363388	G	T	0.00096	TPM1	+	FALSE
chr1	15989141	C	G	0.00677		.	FALSE
chr16	10623706	T	C	0.00064	EMP2	-	TRUE	AluSp	SINE,Alu
chr9	117050998	G	A	0.00326	COL27A1	+	FALSE
chr1	3730400	T	C	0.00457	CEP104	-	TRUE	AluSx3	SINE,Alu
chr4	142945451	T	C	0.00585		.	FALSE
chr11	65179817	T	C	0.00599	FRMD8	+	FALSE
chr1	10517313	T	C	0.00305		.	FALSE	AluJr	SINE,Alu
chr4	10443062	T	G	0.00303	ZNF518B	-	FALSE
chr19	13883548	A	G	0.00566	MRI1	+	TRUE	AluYk3	SINE,Alu
chr6	143382538	A	T	0.00145	AIG1	+	FALSE
chr1	36068210	T	C	0.00178	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	37327665	T	C	2.45403E-06		.	FALSE
chr3	86992161	C	G	0.00050	VGLL3	-	FALSE	(GT)n	SINE,Alu
chr1	75175797	G	A	0.00203	CRYZ	-	FALSE
chr21	44331718	A	G	0.00410		.	FALSE	AluJb	SINE,Alu
chr2	37429627	A	G	0.00330	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr9	132575828	A	T	0.00445	TOR1A	-	FALSE
chr1	120163247	T	C	0.00010	ZNF697	-	FALSE
chr7	300513	T	C	2.92808E-06	FAM20C	+	FALSE
chr1	220231484	T	C	0.00046	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr2	8823958	G	A	0.00017	ID2	+	FALSE
chr2	128602974	A	T	4.23982E-05		.	FALSE	AluSp	SINE,Alu
chr1	1594977	T	C	7.82676E-05	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr5	175816758	T	A	0.00528		.	FALSE
chr3	196771049	T	C	0.00010	DLG1	-	FALSE
chr2	38971637	G	A	2.13337E-05	SRSF7	-	FALSE
chr5	137891109	C	G	0.00031	HSPA9	-	FALSE
chr1	161932324	A	G	0.00104	ATF6	+	FALSE
chr6	26095468	A	G	0.00980	HFE	+	TRUE	AluY	SINE,Alu
chr1	36067749	T	C	0.00748	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	143189486	A	G	0.00122	LOC102723769	-	FALSE
chr8	144357975	C	T	0.00444	GLI4	+	FALSE
chr1	115299504	G	T	0.00067	CSDE1	-	FALSE
chr1	16902943	T	C	0.00833	NBPF1	-	FALSE
chr1	31905905	G	C	0.00028	SERINC2	+	FALSE
chr1	53288897	A	G	0.00160	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	120612006	G	A	0.00930	NOTCH2	-	FALSE
chr2	206987136	T	C	0.00189		.	FALSE	AluSx	SINE,Alu
chr2	61405795	G	T	0.00061	AHSA2	+	FALSE
chr4	170643772	C	T	0.00926	CLCN3	+	FALSE
chr2	112227513	T	C	0.00018	MIR4435-2HG	-	FALSE
chr14	21929044	T	C	3.48024E-06	RAB2B	-	TRUE	AluSp	SINE,Alu
chr2	77745788	T	C	0.00000	LRRTM4	-	FALSE
chr1	148003749	T	C	0.00114	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	19984098	C	G	0.00826	MINOS1-NBL1,NBL1	+	FALSE
chr2	86731290	T	C	0.00149	CHMP3,RNF103-CHMP3	-	FALSE	L1MC1	SINE,Alu
chr1	120839680	A	C	0.00584	FAM72B	+	FALSE
chr1	10521172	T	C	0.00295	DFFA	-	TRUE	AluY	SINE,Alu
chr2	48605828	T	A	0.00650	FOXN2	+	FALSE	(T)n	SINE,Alu
chr1	10517623	T	C	0.00348		.	FALSE	AluSx1	SINE,Alu
chr1	567783	T	C	0.00427	MIR6723	-	FALSE
chr1	10517659	T	C	0.00516		.	FALSE	AluSx1	SINE,Alu
chr1	20978516	T	C	0.00774	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr3	189712010	G	A	1.42873E-07	P3H2	-	FALSE
chr16	48386442	A	G	0.00824	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr9	131872857	C	G	0.00151	CRAT	-	FALSE
chr2	37328034	T	C	5.88540E-05		.	FALSE
chr10	115526177	A	G	0.00237	PLEKHS1	+	FALSE
chr8	144684445	G	A	0.00062		.	FALSE
chr2	237035915	C	G	0.00348	AGAP1	+	FALSE
chr1	25688276	A	G	0.00187	TMEM50A	+	FALSE
chr22	39259534	A	G	0.00371	CBX6	-	FALSE
chr1	38280618	G	T	0.00020	MTF1	-	FALSE	(T)n	SINE,Alu
chr1	44035352	C	T	0.00170	PTPRF	+	FALSE
chr1	31732677	G	A	0.00353	SNRNP40	-	FALSE	A-rich	SINE,Alu
chr11	32125961	C	T	0.00118	RCN1	+	FALSE
chr19	62927	G	A	0.00358	WASH5P	-	FALSE
chr1	24999463	G	T	0.00012	SRRM1	+	FALSE	(T)n	SINE,Alu
chr6	118029818	T	G	0.00119	NUS1	+	FALSE
chr5	177576458	A	T	0.00427		.	FALSE
chr1	53288870	A	G	0.00122	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	36067677	T	C	0.00522	PSMB2	-	TRUE	AluSz	SINE,Alu
chr18	691521	T	C	0.00150	ENOSF1	-	TRUE	AluJr	SINE,Alu
chr1	19232211	G	A	0.00552	IFFO2	-	FALSE	(GT)n	SINE,Alu
chr2	191224981	G	T	0.00245	INPP1	+	FALSE
chr1	26755175	G	C	0.00211	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr5	130537223	A	G	0.00044	LYRM7	+	TRUE	AluSp	SINE,Alu
chr1	27874481	C	A	0.00046	AHDC1	-	FALSE
chr12	66516911	A	T	0.00067	LLPH	-	FALSE
chr7	128143512	A	G	0.00984		.	FALSE	AluJr4	SINE,Alu
chr1	46076543	A	G	0.00989	NASP	+	TRUE	AluSx	SINE,Alu
chr3	149686507	T	C	0.00193	PFN2	-	FALSE
chr4	129796173	G	T	1.40481E-05	JADE1	+	FALSE
chr14	75202553	A	G	0.00014	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	28826128	A	G	0.00483	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	179042832	A	G	0.00308	ZNF639	+	TRUE	AluSp	SINE,Alu
chr1	6582176	T	C	0.00694	NOL9	-	TRUE	AluSq4	SINE,Alu
chr3	81698130	T	C	2.93981E-08	GBE1	-	FALSE
chr2	99813003	A	G	0.00370	MRPL30	+	TRUE	AluJb	SINE,Alu
chr2	91843471	C	T	0.00105	LOC654342	-	FALSE
chr4	89180334	T	C	0.00224	PPM1K	-	TRUE	AluSx4	SINE,Alu
chr3	196660344	T	A	0.00366	SENP5	+	FALSE
chr1	36068370	T	C	3.60077E-09	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	1251631	T	C	0.00256	CPSF3L	-	TRUE	AluSz	SINE,Alu
chr1	168213516	A	G	0.00233		.	FALSE	AluSx1	SINE,Alu
chr19	42375624	A	G	0.00339		.	FALSE	AluSx	SINE,Alu
chr5	40826639	A	G	0.00978	LOC100506548	-	FALSE	LTR78	SINE,Alu
chr17	4929863	A	G	0.00597	KIF1C	+	TRUE	AluJb	SINE,Alu
chr2	109301897	T	C	0.00306	LIMS1	+	FALSE
chr2	32535873	A	G	0.00270		.	FALSE	AluJb	SINE,Alu
chr4	165998149	T	C	0.00057	TMEM192	-	TRUE	AluSx	SINE,Alu
chr2	37431563	A	G	0.00993	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	89518173	T	A	0.00465	GBP1	-	FALSE
chr1	28861636	G	A	0.00754	RCC1	+	FALSE	(GCATGT)n	SINE,Alu
chr3	194125524	C	T	0.00271	ATP13A3	-	FALSE
chr3	99516962	C	A	2.05391E-14	MIR548G	-	FALSE
chr1	109801121	C	T	0.00115	CELSR2	+	FALSE
chr2	128064448	G	T	0.00637	MAP3K2	-	FALSE	(GT)n	SINE,Alu
chr1	206566195	C	T	0.00462	SRGAP2	+	FALSE
chr1	28835937	A	G	0.00121	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	11783009	A	G	7.55078E-05		.	FALSE	AluSx	SINE,Alu
chr4	56282224	A	G	0.00485	TMEM165	+	TRUE	AluJb	SINE,Alu
chr7	20177519	T	C	0.00885	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr5	68505909	A	G	0.00178	CENPH	+	TRUE	AluSx3	SINE,Alu
chr1	54691906	C	G	0.00465	SSBP3	-	FALSE
chr1	114306374	G	A	5.13313E-06	RSBN1	-	FALSE
chr3	52581295	G	A	1.21436E-06	PBRM1	-	FALSE
chr1	120162442	T	C	0.00065	ZNF697	-	FALSE
chr2	136542434	A	T	0.00606	UBXN4	+	FALSE	L1ME4b	SINE,Alu
chr3	73115786	T	C	3.88619E-05	PPP4R2	+	FALSE
chr3	119212015	G	A	0.00024	POGLUT1	+	FALSE
chr1	153617980	A	G	0.00272	CHTOP	+	FALSE
chr1	151846854	T	G	0.00626	THEM4	-	FALSE	AluSx	SINE,Alu
chr2	202031506	A	G	0.00508	CFLAR	+	TRUE	SVA_A	SINE,Alu
chr1	10520296	T	C	0.00765		.	FALSE	AluSx	SINE,Alu
chr1	16919961	C	T	0.00133	NBPF1	-	FALSE
chr4	185309405	A	G	0.00035	IRF2	-	FALSE
chrX	77084007	T	C	0.00141	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	16893813	A	G	0.00255	NBPF1	-	FALSE
chr1	145512073	A	G	0.00285	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr6	109785887	T	C	7.14632E-06	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr1	154557171	G	A	0.00329	ADAR	-	FALSE	A-rich	SINE,Alu
chr8	143413136	C	T	0.00267	TSNARE1	-	FALSE
chr3	191114309	A	T	1.88175E-05	CCDC50	+	FALSE
chr1	204521576	A	G	0.00021	MDM4	+	TRUE	AluSg	SINE,Alu
chr3	178954055	T	C	0.00308	PIK3CA	+	FALSE
chr1	201860626	A	G	0.00599	SHISA4	+	FALSE
chr3	193334991	G	A	0.00473	OPA1	+	FALSE
chr17	73703945	C	T	0.00242	SAP30BP	+	FALSE	MIRc	SINE,Alu
chr1	150937961	A	C	0.00060	CERS2	-	FALSE	G-rich	SINE,Alu
chr1	154554965	G	A	0.00019	ADAR	-	FALSE
chr5	125961647	A	G	1.53189E-07	PHAX	+	FALSE	AluSz6	SINE,Alu
chr1	45975574	A	G	0.00613	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr10	75009585	T	C	2.45347E-10	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr1	145511991	A	G	0.00044	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	235492546	T	G	0.00786	GGPS1	+	FALSE
chr1	160967856	T	C	0.00116	F11R	-	TRUE	AluSp	SINE,Alu
chr1	1593023	G	C	2.84325E-05	CDK11B,SLC35E2B	-	FALSE
chr1	179852074	T	C	0.00338	TOR1AIP1	+	FALSE
chr3	45722055	A	G	0.00835	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	86118417	T	G	0.00211	ZNHIT6	-	FALSE
chr2	132278713	T	C	0.00317	LOC150776	+	FALSE
chr1	10042987	A	G	0.00488	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	16957414	C	T	0.00708		.	FALSE
chr1	6651728	C	T	0.00118	KLHL21	-	FALSE
chr4	152025795	T	A	0.00516	RPS3A	+	FALSE

RBP	ILF3
Knock-Method	shRNA
RBP Family	DZF
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR942MBU
Platform	HiSeq
Pubmed ID	32252787

ILF3 - Target Gene Network