RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	32681797	C	T	0.00791	DCDC2B,TMEM234	+,-	FALSE
chr3	49396588	T	C	0.00533	RHOA	-	FALSE
chr1	9162362	T	C	0.00042		.	FALSE	AluSx	SINE,Alu
chr1	153599390	T	C	0.00135	S100A13	-	FALSE
chr15	102512797	A	G	0.00080	WASH3P	+	FALSE
chr15	34634033	A	G	0.00939	NOP10	-	FALSE
chr2	23926233	C	T	0.00907	KLHL29	+	FALSE
chr5	49692280	T	C	9.73531E-05	EMB	-	FALSE	L2c	SINE,Alu
chr2	11728089	C	T	0.00352	GREB1	+	FALSE	AluSz	SINE,Alu
chr1	6282587	T	C	7.24363E-07	ICMT	-	TRUE
chr1	16905869	G	A	0.00027	NBPF1	-	FALSE
chr17	45761102	T	G	0.00296		.	FALSE
chr5	1317949	C	T	0.00173	CLPTM1L	-	FALSE
chr1	9161142	T	C	0.00160		.	FALSE	AluSx	SINE,Alu
chr1	168214098	T	G	0.00134		.	FALSE
chr1	31732603	A	C	0.00164	SNRNP40	-	FALSE
chr1	10517623	T	C	0.00348		.	FALSE	AluSx1	SINE,Alu
chr1	145512073	A	G	0.00066	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr6	151678865	T	G	0.00016	AKAP12	+	FALSE	(T)n	SINE,Alu
chr3	183899832	C	T	1.28780E-06	AP2M1	+	FALSE
chr1	27107950	G	A	0.00249	ARID1A	+	FALSE
chr2	113287200	C	T	0.00087	TTL	+	FALSE	(T)n	SINE,Alu
chr9	115447527	T	C	0.00200	INIP	-	TRUE	AluJb	SINE,Alu
chr1	201846627	A	T	0.00571	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	1252513	T	C	0.00223	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr6	31657413	T	C	0.00767		.	FALSE
chr1	36642420	T	C	0.00358	MAP7D1	+	FALSE
chr1	21793735	C	G	0.00099	NBPF3	+	FALSE
chr5	43298557	C	T	0.00643	HMGCS1	-	FALSE
chr4	2940486	T	C	7.87098E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr3	167727417	C	T	2.31470E-08	GOLIM4	-	FALSE
chr2	203430456	T	G	0.00162	BMPR2	+	FALSE
chr1	47142538	G	A	0.00870	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	33148706	A	G	0.00038	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	3546128	A	G	0.00213	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	15818090	T	C	0.00089	CASP9	-	TRUE	AluJb	SINE,Alu
chr3	49395693	C	G	0.00243	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr4	39550612	T	C	0.00023	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr22	36677549	C	T	0.00040	MYH9	-	FALSE
chr1	237063504	A	G	0.00900	MTR	+	FALSE	L1ME3F	SINE,Alu
chr19	18306990	G	C	0.00090	MPV17L2	+	FALSE
chr3	39449137	T	C	0.00000	RPSA	+	FALSE
chr3	24019989	C	T	0.00339	NR1D2	+	FALSE
chr1	19543353	T	C	0.00377	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	109812555	A	C	3.87556E-05	CELSR2	+	FALSE
chr1	144828683	C	G	3.91144E-05	NBPF20,NBPF9	+	FALSE
chr5	56559238	T	C	0.00149	GPBP1	+	FALSE
chr2	85772408	G	A	0.00278	GGCX	-	FALSE
chr6	31321806	C	T	6.66134E-15		.	FALSE
chr3	191110320	G	A	0.00419	CCDC50	+	FALSE
chr2	171634349	T	A	0.00104	ERICH2	+	FALSE
chr3	122447574	A	C	0.00224	PARP14	+	FALSE
chr5	180663939	C	A	0.00190	RACK1	-	FALSE
chr12	133298019	A	G	2.77684E-05	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	114940227	T	C	0.00852	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	100203693	G	A	0.00142	FRRS1	-	FALSE
chr1	100549600	G	T	0.00181	SASS6	-	FALSE
chr1	28662053	G	A	0.00158	MED18	+	FALSE	AluSq2	SINE,Alu
chr2	86249961	T	C	0.00292	LOC90784	-	TRUE	AluJr	SINE,Alu
chr1	1001422	G	T	0.00998		.	FALSE	LTR13A	SINE,Alu
chr3	15483830	A	G	3.44106E-05	EAF1	+	FALSE
chr1	16901668	T	C	0.00177	NBPF1	-	FALSE
chr1	200521412	G	A	0.00110	KIF14	-	FALSE
chr3	183861243	A	G	0.00049	EIF2B5	+	FALSE
chr2	20401856	T	G	0.00265	SDC1	-	FALSE
chr12	96661613	A	G	0.00183	ELK3	+	FALSE
chr12	125512534	A	G	0.00024		.	FALSE
chr1	85020487	C	T	0.00120	SPATA1,CTBS	+,-	FALSE
chr1	36770605	C	T	8.58098E-05	THRAP3	+	FALSE	(T)n	SINE,Alu
chr19	42375627	A	G	0.00463		.	FALSE	AluSx	SINE,Alu
chr9	17835	A	G	0.00012	WASH1	-	FALSE
chr1	143135240	C	T	0.00391	LOC102723769	-	FALSE
chr5	96503523	C	T	0.00072	RIOK2	-	FALSE
chr2	99992822	A	C	0.00266	EIF5B	+	FALSE
chr1	16933625	A	G	0.00536	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr4	177241194	C	T	6.44832E-08	SPCS3	+	FALSE
chr4	165998654	T	C	0.00564	TMEM192	-	TRUE	AluSg	SINE,Alu
chr1	148558269	A	G	0.00744	NBPF15	+	FALSE	AluJb	SINE,Alu
chr2	30864980	A	G	7.96700E-05	LCLAT1	+	FALSE
chr1	168218671	A	G	0.00974		.	FALSE	AluSz	SINE,Alu
chr7	6500726	A	T	0.00560	KDELR2	-	FALSE
chr1	24798068	C	A	0.00381	NIPAL3	+	FALSE	AluJr	SINE,Alu
chr2	188330323	T	G	0.00162	TFPI	-	FALSE	L2	SINE,Alu
chr3	196769982	C	G	0.00131	DLG1	-	FALSE
chr3	10193511	A	G	0.00116	VHL	+	TRUE	AluJr	SINE,Alu
chr1	35817023	G	C	0.00547	ZMYM4	+	FALSE
chr1	569803	G	A	0.00166		.	FALSE
chr1	145688973	A	G	7.17653E-05	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr5	14397238	T	C	0.00552	TRIO	+	FALSE
chr5	37291482	T	C	0.00146		.	FALSE	AluSx3	SINE,Alu
chr5	9546451	G	A	0.00030	SNHG18	+	FALSE
chr20	25428646	A	G	9.98122E-05	GINS1	+	TRUE	AluJb	SINE,Alu
chr10	102121601	A	G	0.00000	SCD	+	TRUE	MLT1L	SINE,Alu
chr15	33064465	C	G	0.00735	FMN1	-	FALSE
chr2	37331614	T	C	0.00876		.	FALSE	AluJb	SINE,Alu
chr1	101442211	T	C	0.00590	SLC30A7	+	FALSE
chr2	206987629	T	C	0.00491		.	FALSE	AluJb	SINE,Alu
chr2	191556844	T	C	0.00024	NAB1	+	FALSE
chr17	65335477	T	C	2.02482E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	9329105	T	A	0.00233	H6PD	+	FALSE
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr8	30536015	T	C	6.64592E-05	GSR	-	TRUE	AluJr	SINE,Alu
chr1	46032974	T	C	0.00141	AKR1A1	+	FALSE
chr4	185397529	A	G	0.00116		.	FALSE	FRAM	SINE,Alu
chr1	19953129	T	A	0.00934	MINOS1,MINOS1-NBL1	+	FALSE
chr1	40219280	T	C	8.82951E-05	PPIE	+	FALSE
chr1	118502732	C	T	0.00151	WDR3,SPAG17	+,-	FALSE
chr2	102484489	A	C	0.00281	MAP4K4	+	FALSE
chr1	52306082	A	T	0.00038	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr2	99812311	A	G	0.00016	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	1595078	T	C	0.00714	CDK11B,SLC35E2B	-	FALSE	AluSg	SINE,Alu
chr12	27574427	A	G	7.32829E-06	ARNTL2,ARNTL2-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	35816903	C	T	0.00174	ZMYM4	+	FALSE
chr1	165370475	G	C	0.00256	RXRG	-	FALSE
chr4	57326291	A	G	0.00279	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	184762524	T	C	0.00471	FAM129A	-	TRUE	AluSz	SINE,Alu
chr3	195694448	C	T	0.00025	SDHAP1	-	FALSE
chr2	61764920	C	A	0.00363	XPO1	-	FALSE
chr1	214529320	T	G	0.00365	PTPN14	-	FALSE	AluJb	SINE,Alu
chrX	118920477	A	T	0.00529	RPL39	-	FALSE
chr3	14986104	T	C	0.00307	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr15	91044387	T	G	0.00077	IQGAP1	+	FALSE
chr12	32532505	G	A	0.00385		.	FALSE
chr1	10518591	A	T	0.00545		.	FALSE
chr3	15112612	T	C	0.00634	RBSN	-	TRUE	AluSq2	SINE,Alu
chr3	176742501	G	A	0.00707	TBL1XR1	-	FALSE	(A)n	SINE,Alu
chr1	10520331	C	T	0.00816		.	FALSE	AluSx1	SINE,Alu
chr11	65179815	C	A	0.00447	FRMD8	+	FALSE
chr1	28835847	A	G	0.00553	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	110136328	T	A	0.00577	GNAI3	+	FALSE
chr2	121979980	G	A	0.00525	TFCP2L1	-	FALSE	L1MB8	SINE,Alu
chr1	28865500	T	A	0.00509	RCC1	+	FALSE
chr5	37290413	T	C	0.00467		.	FALSE	AluSz	SINE,Alu
chr3	40577752	A	G	0.00111	ZNF621	+	TRUE	AluSz	SINE,Alu
chr3	48787640	T	C	0.00038	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chrX	123046757	A	G	0.00535	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	117530273	A	G	0.00601	PTGFRN	+	FALSE
chr10	1086810	T	A	0.00245	IDI2-AS1,IDI1	+,-	FALSE
chr1	40537940	A	C	0.00015	CAP1	+	FALSE	(A)n	SINE,Alu
chr16	10623660	T	C	0.00074	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	212587320	T	C	0.00023	TMEM206	-	FALSE
chr12	42719890	A	G	0.00730	ZCRB1	-	FALSE
chr4	100869246	T	C	0.00444	H2AFZ	-	FALSE
chr21	34729969	A	G	0.00077	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	179326882	A	G	1.03454E-05	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	16889502	T	C	0.00516	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	204521160	A	G	0.00231	MDM4	+	TRUE	AluSp	SINE,Alu
chr1	20976078	T	C	0.00064	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr4	73922978	T	C	0.00079	COX18	-	TRUE	AluSz	SINE,Alu
chr1	117530217	C	T	0.00048	PTGFRN	+	FALSE
chr7	20178490	T	C	0.00028	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	53378536	T	C	0.00075	ECHDC2	-	TRUE	AluSp	SINE,Alu
chr14	65400786	T	G	0.00077	CHURC1-FNTB,CHURC1	+	FALSE	AluSx	SINE,Alu
chr2	217366534	A	G	0.00700		.	FALSE	AluSz	SINE,Alu
chr1	10521172	T	C	0.00295	DFFA	-	TRUE	AluY	SINE,Alu
chr2	206862015	G	A	0.00368	INO80D	-	FALSE
chr1	171509327	G	A	0.00110	PRRC2C	+	FALSE
chr2	105881486	A	G	0.00042	TGFBRAP1	-	FALSE
chr1	10518733	T	C	0.00050		.	FALSE	AluSx1	SINE,Alu
chr16	69151495	T	A	0.00304	HAS3	+	FALSE	(T)n	SINE,Alu
chr17	28513176	G	A	0.00996	NSRP1	+	FALSE	AluJr	SINE,Alu
chr4	177252326	A	G	0.00554	SPCS3	+	TRUE
chr1	9160976	T	C	0.00015		.	FALSE	AluJb	SINE,Alu
chr3	56654248	T	G	3.99921E-06	CCDC66,FAM208A	+,-	FALSE
chr1	92862826	A	G	0.00100		.	FALSE	AluJr	SINE,Alu
chr1	148010973	C	T	0.00045	NBPF8	-	FALSE
chr15	90820171	A	G	0.00185		.	FALSE
chr2	55516902	G	A	0.00011	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr4	25253995	C	T	9.95051E-10	PI4K2B	+	FALSE
chr1	197093361	G	A	8.55632E-06	ASPM	-	FALSE
chr1	204520000	A	G	0.00032	MDM4	+	TRUE	Charlie2a	SINE,Alu
chr19	18475303	A	G	0.00757	PGPEP1	+	TRUE	AluSx1	SINE,Alu
chr1	118411057	T	G	0.00254	GDAP2	-	FALSE
chr2	223436459	A	T	1.48017E-05	FARSB	-	FALSE
chr1	89447882	A	G	0.00103	KYAT3,RBMXL1	-	FALSE
chr1	24287616	G	A	0.00218	PNRC2	+	FALSE
chr2	183622547	T	G	0.00346	DNAJC10	+	FALSE
chr1	118502750	T	C	0.00922	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	19543349	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	185802243	C	A	0.00172	ZNF804A	+	FALSE
chr1	93602673	C	T	0.00252	MTF2	+	FALSE
chr1	32373837	G	T	0.00068	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr1	6279957	A	G	0.00814	RNF207	+	TRUE	AluSp	SINE,Alu
chr4	17803673	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr2	207943813	G	T	0.00619	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr1	109476363	A	G	0.00172	GPSM2,CLCC1	+,-	FALSE
chr1	150704418	T	C	0.00420	CTSS	-	TRUE	AluJo	SINE,Alu
chr5	125961426	A	G	0.00434	PHAX	+	TRUE	AluSz6	SINE,Alu
chr6	150047376	T	C	0.00612	NUP43	-	TRUE	AluSc	SINE,Alu
chr9	128729384	G	C	0.00059	PBX3	+	FALSE
chr1	36068275	T	C	0.00048	PSMB2	-	TRUE	AluSc	SINE,Alu
chr4	17629934	T	C	0.00178		.	FALSE	MER90	SINE,Alu
chr2	100897573	G	A	0.00231	LONRF2	-	FALSE
chr1	93803490	T	C	0.00572	CCDC18-AS1	-	FALSE	AluJr	SINE,Alu
chr1	19984104	A	C	0.00638	MINOS1-NBL1,NBL1	+	FALSE
chr1	1344998	A	G	5.29904E-05		.	FALSE	AluSg	SINE,Alu
chr1	52520864	A	T	0.00041	TXNDC12	-	FALSE
chr14	75203036	A	G	0.00837	FCF1	+	TRUE	AluSx	SINE,Alu
chr2	198416734	A	T	0.00257	HSPE1-MOB4,MOB4	+	FALSE
chr1	45244414	T	A	0.00456		.	FALSE
chr1	153617980	A	G	8.13079E-05	CHTOP	+	FALSE
chr1	53292607	T	A	2.07283E-05	ZYG11B	+	FALSE
chr2	85837797	T	C	0.00050	USP39,C2orf68	+,-	FALSE	AluSx	SINE,Alu
chr1	28826118	A	G	0.00341	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	85488830	T	C	0.00137	MCOLN3	-	TRUE	AluJr	SINE,Alu
chr1	120839743	C	T	0.00647	FAM72B	+	FALSE
chr2	27315252	G	A	0.00377	KHK	+	FALSE
chr3	46007825	T	C	4.58354E-06	FYCO1	-	FALSE
chr3	172365720	C	T	3.67728E-06	NCEH1	-	FALSE
chr2	114356336	C	T	0.00680	WASH2P	+	FALSE
chr1	38280611	G	T	0.00670	MTF1	-	FALSE	(T)n	SINE,Alu
chr7	4810530	G	A	0.00236	FOXK1	+	FALSE	(GT)n	SINE,Alu
chr1	28826223	A	G	0.00990	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr15	40462780	G	A	0.00251	BUB1B	+	FALSE
chr1	94352646	G	T	0.00645	GCLM	-	FALSE	AluSx1	SINE,Alu
chr1	89447720	G	A	0.00521	KYAT3,RBMXL1	-	FALSE
chr4	89181477	T	C	7.00483E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	205737665	G	T	0.00025	RAB29	-	FALSE	AluSq2	SINE,Alu
chr6	34231301	G	C	0.00772		.	FALSE
chr1	144598641	C	T	0.00250	NBPF20	+	FALSE
chr17	73940094	T	C	0.00557	ACOX1	-	TRUE	AluJb	SINE,Alu
chr1	161338504	C	G	6.09223E-05		.	FALSE
chr1	212277616	C	T	0.00248	DTL	+	FALSE
chr3	172115590	A	G	0.00355	FNDC3B	+	FALSE
chr1	28662186	A	G	8.22643E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	19543353	T	C	0.00036	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr7	20178460	T	C	6.50978E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr5	151041877	C	A	1.29615E-05	SPARC	-	FALSE
chr1	10517688	T	C	0.00179		.	FALSE	AluSx1	SINE,Alu
chr1	10521238	T	C	0.00793	DFFA	-	TRUE	AluY	SINE,Alu
chr5	135515156	G	A	0.00364	SMAD5	+	FALSE
chr1	193054574	G	T	0.00511	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr16	11445552	T	C	0.00533	RMI2	+	FALSE
chr3	119543179	C	A	0.00992	GSK3B	-	FALSE	(CA)n	SINE,Alu
chr5	79923843	T	C	0.00229	DHFR	-	TRUE	AluSp	SINE,Alu
chr12	25360463	A	T	0.00118	KRAS	-	FALSE
chr1	16920002	G	C	0.00383	NBPF1	-	FALSE
chr12	69159400	G	A	0.00173	SLC35E3	+	FALSE	(AT)n	SINE,Alu
chr1	74672474	G	A	0.00014	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr1	54493197	T	C	0.00064	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr1	1570919	C	T	0.00161	CDK11B	-	FALSE
chr11	32125961	C	T	0.00118	RCN1	+	FALSE
chr4	56291751	A	C	0.00291	TMEM165	+	FALSE
chr1	36533368	A	G	0.00635		.	FALSE	AluSx	SINE,Alu
chr1	19684006	G	C	0.00396	CAPZB	-	FALSE
chr1	120165040	T	C	0.00107	ZNF697	-	FALSE
chr1	16929327	C	T	0.00304	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr3	48787051	T	C	0.00105	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr5	96110613	T	A	0.00993	ERAP1	-	FALSE
chr1	15989141	C	G	0.00364		.	FALSE
chr9	96438974	C	G	0.00083	PHF2	+	FALSE	(CTCCAC)n	SINE,Alu
chr19	46053667	A	G	0.00995	OPA3	-	FALSE
chr3	15114395	T	C	0.00333	RBSN	-	TRUE	AluY	SINE,Alu
chr3	156258230	T	C	0.00176	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	148010952	C	T	0.00393	NBPF8	-	FALSE
chr2	68402154	A	T	0.00991	PNO1	+	FALSE
chr1	9416568	C	T	0.00061	SPSB1	+	FALSE
chr4	39550739	T	C	0.00231	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr1	155030557	A	C	0.00883	LOC100505666,ADAM15	+,-	FALSE
chr17	56049829	T	C	5.66836E-08	VEZF1	-	TRUE
chr4	153545691	T	C	0.00671		.	FALSE	AluJb	SINE,Alu
chr12	56815652	C	T	1.92663E-05	TIMELESS	-	FALSE
chr2	198416722	A	T	0.00970	HSPE1-MOB4,MOB4	+	FALSE
chr1	1431295	T	C	3.55878E-05	ATAD3B	+	FALSE
chr14	23441536	G	A	0.00793	AJUBA	-	FALSE	GA-rich	SINE,Alu
chr2	176042865	G	T	0.00887	ATP5G3	-	FALSE
chr1	148343689	A	G	0.00517	NBPF8,NBPF14,NBPF9	-	FALSE
chr12	98943201	A	G	9.51066E-07	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	6282237	T	C	0.00455	ICMT	-	TRUE	AluSz	SINE,Alu
chr19	42376711	A	G	0.00223		.	FALSE	AluSp	SINE,Alu
chr1	931807	G	A	0.00578		.	FALSE
chr1	145689568	A	G	8.25649E-05	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	1419823	A	G	0.00816	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	148003730	T	C	0.00636	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	211533352	A	G	0.00025	TRAF5	+	FALSE
chr19	56090351	C	T	1.52943E-09	ZNF579	-	FALSE
chr1	28826190	A	G	0.00233	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr4	154257510	A	C	0.00121	TRIM2	+	FALSE	(A)n	SINE,Alu
chr5	147793406	A	G	0.00323	FBXO38	+	FALSE
chr3	178740415	G	A	0.00227	ZMAT3	-	FALSE
chr4	38937372	T	C	0.00388	FAM114A1	+	FALSE
chr1	27205634	T	C	0.00025		.	FALSE	FLAM_A	SINE,Alu
chr3	42591046	C	A	0.00933	SEC22C	-	FALSE
chr2	136542427	T	A	0.00075	UBXN4	+	FALSE	L1ME4b	SINE,Alu
chr1	9328102	A	G	7.16435E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	180247477	C	T	0.00060		.	FALSE
chr1	1337734	C	T	3.46713E-05	MRPL20	-	FALSE
chr1	143231313	G	A	0.00137		.	FALSE
chr1	45975358	A	G	0.00807	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	28826150	A	G	0.00152	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	157963369	C	G	0.00667	KIRREL	+	FALSE
chr5	151041876	G	T	5.29152E-05	SPARC	-	FALSE
chr2	17836722	T	A	0.00816	VSNL1	+	FALSE
chr6	29910581	C	A	6.62336E-05		.	FALSE
chr5	92956173	C	T	0.00646	FAM172A	-	FALSE
chr1	20826781	C	T	0.00110	MUL1	-	FALSE
chr1	53291435	A	G	0.00044	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	38423181	T	G	0.00793	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	22400707	C	G	0.00232	CDC42	+	FALSE	AluSc8	SINE,Alu
chr1	1419690	A	G	0.00464	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chrX	77083548	T	C	0.00205	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr2	37328008	T	C	1.98312E-07		.	FALSE
chr1	55316322	A	G	0.00266	DHCR24	-	FALSE
chr1	180082702	G	C	0.00019	CEP350	+	FALSE
chr11	133689	G	A	0.00856		.	FALSE	AluJb	SINE,Alu
chr4	109551180	C	A	0.00369	RPL34	+	FALSE
chr1	115110683	A	C	0.00168	BCAS2	-	FALSE
chr1	143467373	T	C	0.00182		.	FALSE
chr5	122359499	C	A	0.00277	PPIC	-	FALSE	(AC)n	SINE,Alu
chr9	116022893	C	A	0.00060	SLC31A1	+	FALSE
chr2	136541076	C	A	0.00211	UBXN4	+	FALSE
chr13	52952575	G	A	0.00030	THSD1	-	FALSE
chr1	16933629	A	G	0.00310	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	19542401	T	C	0.00071	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr12	109886822	A	C	0.00406	KCTD10	-	FALSE
chr1	12677547	G	A	0.00543	DHRS3	-	FALSE	(A)n	SINE,Alu
chr1	161932324	A	G	0.00104	ATF6	+	FALSE
chr17	41133090	A	T	0.00148	RUNDC1	+	FALSE
chr1	16890428	T	A	0.00233	NBPF1	-	FALSE
chr1	9328120	A	G	1.75282E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	206516261	C	T	0.00179	SRGAP2	+	FALSE
chr1	16861718	C	T	0.00891	LOC100132147	-	FALSE
chr1	144851537	A	G	0.00275	NBPF20,PDE4DIP	+,-	FALSE
chr15	90819444	A	G	5.90002E-05		.	FALSE	AluSx	SINE,Alu
chr1	6583138	T	C	0.00010	NOL9	-	TRUE	AluSx4	SINE,Alu
chr17	5288081	C	T	0.00518	RABEP1	+	FALSE
chr1	203277252	G	A	0.00559	BTG2	+	FALSE
chr1	113243048	C	T	0.00023	MOV10	+	FALSE
chr1	78029905	T	A	0.00256	ZZZ3	-	FALSE
chr1	156256064	C	T	0.00619	SMG5,TMEM79	+,-	FALSE
chr1	142688506	T	C	0.00337		.	FALSE
chr1	116238056	G	A	0.00014	VANGL1	+	FALSE
chr1	3395039	G	A	0.00027	ARHGEF16	+	FALSE
chr2	37478348	T	A	0.00392	PRKD3	-	FALSE
chr1	54691921	G	A	0.00010	SSBP3	-	FALSE
chr4	170643973	C	T	0.00232	CLCN3	+	FALSE
chr17	57279167	A	G	6.96573E-05	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	53366673	A	G	0.00243	ECHDC2	-	FALSE	AluJb	SINE,Alu
chr5	149829073	A	G	0.00866	RPS14	-	FALSE
chr4	177251328	C	T	9.41230E-05	SPCS3	+	FALSE
chr2	234385276	T	C	0.00951	USP40	-	FALSE
chr1	14143003	A	G	0.00028	PRDM2	+	FALSE
chr1	95660018	T	A	0.00052	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	46075715	A	G	0.00842	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	94995225	G	A	0.00344	F3	-	FALSE
chr6	74303531	T	C	0.00487	SLC17A5	-	TRUE	AluJr	SINE,Alu
chr1	100548868	T	C	0.00114	MFSD14A	+	FALSE
chr10	94414146	A	G	0.00911	KIF11	+	FALSE
chr1	28929961	T	A	0.00068	TAF12	-	FALSE
chr1	110170896	T	C	5.12229E-06	AMPD2	+	FALSE
chr1	9643028	A	G	0.00017		.	FALSE	AluSx	SINE,Alu
chr17	28575454	A	C	0.00470	BLMH	-	FALSE
chr1	28939803	C	T	1.27013E-09	TAF12	-	FALSE
chr1	19543456	T	C	0.00011	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chrM	5265	C	A	0.00026		.	FALSE
chr1	10367058	G	A	0.00328	KIF1B	+	FALSE
chr3	12882839	C	G	0.00118	RPL32	-	FALSE
chr1	26451672	T	C	0.00912	PDIK1L	+	FALSE
chr6	52860743	T	G	1.01575E-05		.	FALSE	7SK	SINE,Alu
chr1	10517613	T	C	0.00499		.	FALSE	AluSx1	SINE,Alu
chr3	179306775	C	T	7.88487E-06	MRPL47	-	FALSE
chr11	119533723	A	G	0.00169	NECTIN1	-	FALSE
chr2	20192696	G	A	0.00400	MATN3,LOC101928222	+,-	FALSE
chr1	43629982	C	T	0.00733	EBNA1BP2	-	FALSE
chr2	10567337	G	C	0.00940	HPCAL1	+	FALSE
chr7	100031496	T	A	0.00119	MEPCE	+	FALSE
chr1	211918115	C	T	0.00979	LPGAT1	-	FALSE	MER63D	SINE,Alu
chr1	226172221	T	C	0.00118	SDE2	-	FALSE	L1MEf	SINE,Alu
chr1	67874689	T	C	0.00112	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	170893070	G	A	0.00071	TNIK	-	FALSE
chr1	10521254	T	C	0.00684	DFFA	-	TRUE	AluY	SINE,Alu
chr3	44791062	T	C	0.00124	KIAA1143	-	FALSE
chr1	41487492	C	G	0.00221	SLFNL1-AS1	+	FALSE
chr16	75479468	T	C	0.00250	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr10	88729314	C	T	8.29001E-05	ADIRF	+	FALSE
chr7	29961437	T	G	6.91541E-06	SCRN1	-	FALSE
chr1	118165973	C	T	3.23914E-05	FAM46C	+	FALSE
chr3	45722047	A	G	0.00319	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	20976078	T	C	0.00344	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr11	93474585	T	G	0.00531	TAF1D	-	FALSE
chr1	227211026	C	G	0.00373	CDC42BPA	-	FALSE
chr1	40539211	A	T	0.00105	PPT1	-	FALSE
chr1	44072066	C	T	0.00846	PTPRF	+	FALSE
chr1	212114666	C	G	0.00858	INTS7	-	FALSE
chr17	30327115	C	T	0.00522	SUZ12	+	FALSE
chr1	145500917	G	C	0.00930	NBPF20,NBPF10,LIX1L	+	FALSE
chr3	148863151	A	G	0.00062	HPS3	+	FALSE
chr2	99812864	A	G	0.00458	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	19585903	G	A	0.00522	MRTO4	+	FALSE	AluJr	SINE,Alu
chr1	143399181	T	G	0.00832		.	FALSE
chr4	77082799	G	C	0.00148	SCARB2	-	FALSE
chr2	233446266	C	T	0.00177	EIF4E2	+	FALSE
chr17	65334753	T	C	4.53868E-08	PSMD12	-	TRUE	AluSq	SINE,Alu
chr2	206983797	T	C	0.00145		.	FALSE	AluSx	SINE,Alu
chr2	47137976	T	C	0.00398	MCFD2	-	TRUE	AluJr	SINE,Alu
chr3	121351277	A	T	0.00388	HCLS1	-	FALSE
chr5	139931627	C	T	0.00073	SRA1	-	FALSE
chr1	10520067	T	C	2.08449E-05		.	FALSE	AluSx	SINE,Alu
chr4	120979178	T	C	0.00433		.	FALSE	AluSg4	SINE,Alu
chr2	206986233	T	C	0.00545		.	FALSE	AluSz	SINE,Alu
chr2	70316226	A	C	0.00426	PCBP1	+	FALSE
chr1	6653508	G	A	0.00320	KLHL21	-	FALSE
chr1	1595074	T	C	0.00296	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr2	31491075	A	G	0.00061	EHD3	+	FALSE
chr1	1650797	A	G	0.00276	CDK11B,CDK11A	-	FALSE
chr5	150578574	A	G	0.00447	CCDC69	-	FALSE
chr2	206986978	T	C	0.00159		.	FALSE	AluJr	SINE,Alu
chr9	131457039	C	T	0.00148	SET	+	FALSE
chr1	85647107	T	C	0.00255	SYDE2	-	TRUE	AluSx	SINE,Alu
chr3	101284940	T	C	8.16697E-05	TRMT10C	+	FALSE
chr1	109855150	A	C	0.00251	SORT1	-	FALSE	A-rich	SINE,Alu
chr12	72182168	G	C	0.00867	RAB21	+	FALSE
chr15	91044381	C	A	0.00440	IQGAP1	+	FALSE
chr2	36776054	C	T	0.00117	CRIM1	+	FALSE
chr1	148003756	T	C	0.00162	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	24175288	C	G	0.00646	FUCA1	-	FALSE
chr2	99812815	A	G	0.00245	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	179876988	C	G	0.00047	TOR1AIP1	+	FALSE
chr1	109475629	A	G	0.00310	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr5	79277952	A	C	0.00041	MTX3	-	FALSE	(AC)n	SINE,Alu
chr1	1647871	T	C	0.00906	CDK11B,CDK11A	-	FALSE
chr1	67874697	T	C	0.00186	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	19981865	A	G	0.00213	MINOS1-NBL1,NBL1	+	FALSE
chr3	48787046	T	C	0.00699	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr7	65618786	A	G	3.58027E-08	CRCP	+	TRUE	AluSx3	SINE,Alu
chr4	185309401	A	G	0.00782	IRF2	-	FALSE
chr2	128602500	T	C	4.07621E-06		.	FALSE	AluSq2	SINE,Alu
chr3	178954055	T	C	0.00308	PIK3CA	+	FALSE
chr3	109049163	A	G	0.00440	DPPA4	-	FALSE	AluSp	SINE,Alu
chr1	9645101	C	T	0.00726		.	FALSE	(ATATTC)n	SINE,Alu
chr2	217366499	A	G	0.00183		.	FALSE	AluSz	SINE,Alu
chr1	87213177	C	A	0.00020	SH3GLB1	+	FALSE
chr7	286402	A	G	1.78989E-09	FAM20C	+	FALSE
chr3	191115082	G	C	0.00980	CCDC50	+	FALSE
chr1	89649369	T	C	0.00333	GBP4	-	TRUE	AluJb	SINE,Alu
chr1	145281543	C	T	0.00028	NBPF20,NOTCH2NL	+	FALSE
chr1	150937963	A	G	0.00658	CERS2	-	FALSE	G-rich	SINE,Alu
chr3	25777072	C	T	4.38639E-06	NGLY1	-	FALSE	L1MEg	SINE,Alu
chr5	60050122	A	T	0.00272	ELOVL7	-	FALSE
chr1	45476889	C	G	0.00969	HECTD3	-	FALSE
chr1	52817434	T	C	0.00799	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	95362514	G	T	7.06346E-05	CNN3	-	FALSE
chr14	105676287	C	T	0.00036	BRF1	-	FALSE
chr1	6694980	G	A	0.00240	THAP3,DNAJC11	+,-	FALSE
chr3	10192596	A	G	9.40892E-06	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	37327702	T	C	0.00989		.	FALSE
chr1	65897981	G	A	0.00653	LEPR,LEPROT	+	FALSE
chr2	242512138	A	G	9.62871E-05	BOK	+	FALSE
chr4	6689813	C	A	0.00141		.	FALSE	L2b	SINE,Alu
chr1	6694226	C	T	0.00742	THAP3	+	FALSE
chr3	194362721	G	A	5.25740E-07	LSG1	-	FALSE
chr1	33148362	A	T	0.00870	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	12628188	T	C	6.05765E-06	DHRS3	-	FALSE
chr1	16524869	T	C	0.00164	ARHGEF19	-	FALSE
chr1	111489903	A	C	0.00666	LRIF1	-	FALSE
chr1	24861704	G	A	0.00345	RCAN3	+	FALSE
chr2	198368110	C	A	0.00053	HSPE1,HSPE1-MOB4	+	FALSE
chr1	36067677	T	C	0.00462	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	45722055	A	G	0.00835	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr4	17629937	G	A	0.00795		.	FALSE	MER90	SINE,Alu
chr6	74133914	T	C	0.00014		.	FALSE	AluY	SINE,Alu
chr1	36068237	T	C	0.00075	PSMB2	-	TRUE	AluSc	SINE,Alu

RBP	HLTF
Knock-Method	shRNA
RBP Family	Non-canonical_RBP
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR010ZMZ
Platform	HiSeq
Pubmed ID	32252787

HLTF - Target Gene Network