RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	36642420	T	C	9.55653E-06	MAP7D1	+	FALSE
chr1	16909220	T	C	0.00029	NBPF1	-	FALSE
chr16	75479331	T	C	0.00725	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	28859264	T	G	0.00030	RCC1	+	FALSE
chr1	53359182	A	G	0.00321	ZYG11A	+	TRUE	AluSx	SINE,Alu
chr1	36068370	T	C	0.00067	PSMB2	-	TRUE	AluSc	SINE,Alu
chrX	135300016	T	C	0.00358	MAP7D3	-	TRUE	AluSz	SINE,Alu
chr15	41590972	A	G	2.40282E-05	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr8	48890109	A	G	8.88178E-16	MCM4	+	TRUE	AluJb	SINE,Alu
chr2	10270775	G	T	0.00953	RRM2	+	FALSE	AluSx	SINE,Alu
chr1	16112795	A	G	0.00499	FBLIM1	+	FALSE
chr1	168213516	A	G	0.00233		.	FALSE	AluSx1	SINE,Alu
chr1	51822219	G	A	0.00223	EPS15	-	FALSE
chr1	89447720	G	A	0.00029	KYAT3,RBMXL1	-	FALSE
chr2	206986972	T	C	0.00462		.	FALSE	AluJr	SINE,Alu
chr3	112320485	T	C	0.00107	LINC01279	-	TRUE	AluJb	SINE,Alu
chr6	97592897	A	C	0.00144	MMS22L	-	FALSE
chr1	20976078	T	C	0.00344	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	110604747	G	A	0.00739	ALX3	-	FALSE
chr1	151742798	T	C	0.00626	OAZ3	+	FALSE
chr3	24019989	C	T	0.00339	NR1D2	+	FALSE
chr1	26143727	A	T	0.00602	SEPN1	+	FALSE	AluSx	SINE,Alu
chr6	31132911	C	T	0.00000		.	FALSE
chr7	94060360	T	G	0.00014	COL1A2	+	FALSE
chr1	10520258	T	C	0.00152		.	FALSE	AluSx	SINE,Alu
chr4	177251328	C	T	9.41230E-05	SPCS3	+	FALSE
chr3	50686350	T	G	2.12445E-05	MAPKAPK3	+	FALSE
chr6	3021352	T	C	0.00082	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr1	78603279	A	G	0.00089	GIPC2	+	FALSE
chr18	47919174	A	G	0.00820	SKA1	+	TRUE	AluYk4	SINE,Alu
chr1	150594611	G	T	0.00329	ENSA	-	FALSE
chr1	100440553	A	G	0.00553	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr1	16929056	C	T	0.00398	NBPF1	-	FALSE
chr1	1421531	C	A	0.00467	ATAD3B	+	FALSE
chr1	19585554	A	G	0.00117	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr1	713710	G	C	0.00448	LOC100288069	-	FALSE	FRAM	SINE,Alu
chr3	5258985	T	C	0.00436	EDEM1	+	FALSE
chr1	110913120	C	T	0.00627	SLC16A4	-	FALSE
chr5	118174668	T	C	1.32199E-05	DTWD2	-	TRUE	AluY	SINE,Alu
chr7	75958129	T	A	0.00162	YWHAG	-	FALSE
chr1	148561090	G	A	0.00087	NBPF15	+	FALSE
chr8	37351214	T	C	0.00109	LINC01605	-	FALSE
chr3	73025345	A	G	0.00219		.	FALSE	AluSz	SINE,Alu
chr3	124774432	T	G	0.00754	HEG1	-	FALSE
chr14	21928940	T	C	0.00212	RAB2B	-	TRUE	AluSp	SINE,Alu
chr8	30535975	T	C	5.05710E-05	GSR	-	TRUE	AluJr	SINE,Alu
chr3	57199227	A	C	0.00638	IL17RD	-	FALSE
chr2	37330527	T	C	0.00284		.	FALSE	AluSq2	SINE,Alu
chr17	65334846	T	C	0.00456	PSMD12	-	FALSE	AluSq	SINE,Alu
chr1	9328102	A	G	7.16435E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	144868170	C	T	0.00415	NBPF20,PDE4DIP	+,-	FALSE
chr2	9630231	C	T	0.00895	ADAM17	-	FALSE
chr3	195412715	T	C	0.00837	SDHAP2	+	FALSE
chr1	145290818	C	G	0.00287	NBPF20	+	FALSE
chr2	152334323	A	G	0.00504		.	FALSE	AluSq	SINE,Alu
chr2	203742324	T	C	0.00482		.	FALSE	AluJb	SINE,Alu
chr1	10520603	T	G	0.00838	DFFA	-	FALSE	AluSc8	SINE,Alu
chr1	23636278	A	T	0.00121	HNRNPR	-	FALSE
chr1	10438014	A	C	0.00046	KIF1B	+	FALSE
chr1	143135166	G	T	0.00325	LOC102723769	-	FALSE
chr1	224621934	G	C	0.00245	WDR26	-	FALSE	(GGA)n	SINE,Alu
chr1	101442570	A	T	0.00377	SLC30A7	+	FALSE
chr3	10976876	A	G	0.00343	SLC6A11	+	FALSE
chr2	26617209	A	G	5.06124E-05	EPT1	+	FALSE	AluSz	SINE,Alu
chr2	37327702	T	C	8.81739E-07		.	FALSE
chr1	150190851	G	T	0.00339	ANP32E	-	FALSE
chr6	134492482	A	C	0.00108	SGK1	-	FALSE
chr15	49454018	C	T	0.00053	GALK2	+	FALSE	AluSx1	SINE,Alu
chr1	45976112	A	G	1.14998E-06	MMACHC	+	TRUE	AluJr	SINE,Alu
chr1	36067817	T	C	0.00120	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	33961147	T	G	0.00911	ZSCAN20	+	FALSE
chr1	171561859	A	T	0.00439	PRRC2C	+	FALSE
chr12	123253851	A	G	0.00470	DENR	+	FALSE	(AT)n	SINE,Alu
chr3	98518158	A	T	0.00960	DCBLD2	-	FALSE
chr1	15736752	G	A	0.00170	EFHD2	+	FALSE
chr1	10518733	T	C	0.00399		.	FALSE	AluSx1	SINE,Alu
chr1	3806074	G	A	0.00809	C1orf174	-	FALSE	AluSp	SINE,Alu
chr1	16889413	T	C	8.21040E-06	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	78414310	C	A	0.00067	FUBP1	-	FALSE
chr1	36068227	T	C	0.00398	PSMB2	-	TRUE	AluSc	SINE,Alu
chr10	120801786	G	C	0.00752	EIF3A	-	FALSE
chr1	19595137	C	T	0.00085	AKR7L	-	FALSE
chr11	111431662	T	A	0.00204	LAYN	+	FALSE
chr1	58946773	C	T	0.00037	OMA1	-	FALSE
chr1	16933631	G	A	0.00927	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr2	85132777	T	C	1.13350E-06	TMSB10	+	FALSE
chr4	2940371	T	C	0.00150	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr20	18468339	T	C	0.00062	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	114306374	G	A	0.00017	RSBN1	-	FALSE
chr5	70503889	C	A	0.00131		.	FALSE
chr1	10517527	T	C	0.00430		.	FALSE	AluSx1	SINE,Alu
chr1	145513016	A	G	0.00400	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	62628606	A	G	0.00164	PATJ	+	TRUE	AluSg4	SINE,Alu
chr3	105258861	A	G	0.00030	ALCAM	+	FALSE
chr2	55516911	A	G	0.00719	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	10518613	A	T	0.00819		.	FALSE	AluSx1	SINE,Alu
chr1	148004548	T	C	0.00220	NBPF8	-	FALSE
chr2	37330606	T	C	0.00136		.	FALSE	AluSq2	SINE,Alu
chr1	113455441	C	A	0.00047	SLC16A1	-	FALSE	(A)n	SINE,Alu
chr3	27674782	A	G	0.00630		.	FALSE
chr1	93617403	T	G	0.00053	TMED5	-	FALSE
chr6	157405930	G	A	0.00077	ARID1B	+	FALSE
chr1	145369498	A	G	0.00700	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	15989141	C	G	0.00091		.	FALSE
chr2	47137976	T	C	0.00398	MCFD2	-	TRUE	AluJr	SINE,Alu
chr16	74655596	T	G	0.00028	RFWD3	-	FALSE	AluSx	SINE,Alu
chr14	19686228	C	T	0.00106	DUXAP10	+	FALSE
chr1	16889639	T	C	0.00350	NBPF1	-	TRUE
chr1	153617980	A	G	0.00272	CHTOP	+	FALSE
chr2	238499528	T	G	0.00332	RAB17	-	FALSE
chr8	128752685	G	A	2.94991E-09	MYC	+	FALSE
chr1	63881552	C	T	0.00293	ALG6	+	FALSE
chr1	13942885	C	A	0.00038	PDPN	+	FALSE
chr1	94342564	C	A	0.00098	DNTTIP2	-	FALSE
chr1	29446554	C	A	0.00682	EPB41,TMEM200B	+,-	FALSE
chr2	61764916	A	C	0.00361	XPO1	-	FALSE	(AC)n	SINE,Alu
chr3	45267450	C	G	0.00036	TMEM158	-	FALSE
chr3	48787633	T	C	0.00314	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr16	15023271	G	A	0.00403		.	FALSE
chr3	9833986	C	T	2.34147E-05	TADA3	-	FALSE
chr1	91990450	A	T	0.00405	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr7	144060286	A	G	0.00674	ARHGEF5	+	FALSE
chr1	114443608	A	G	0.00147	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr3	49053219	A	G	1.70535E-05	WDR6,DALRD3	+,-	FALSE
chr11	769459	T	C	0.00082	PDDC1	-	TRUE	AluSq2	SINE,Alu
chr3	44791343	T	C	0.00539	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr11	65404877	G	A	0.00106	PCNX3	+	FALSE
chr3	196670090	G	A	6.78352E-09	NCBP2-AS2	+	FALSE
chr4	77996969	T	G	0.00971	CCNI	-	FALSE
chr1	53289892	A	G	0.00505	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	115249239	G	A	0.00034	NRAS	-	FALSE
chr2	86252214	T	C	0.00930	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	22445725	C	G	0.00913	WNT4	-	FALSE
chr2	200813126	T	C	0.00713	TYW5	-	FALSE
chr5	52251222	G	T	0.00808		.	FALSE	(GATA)n	SINE,Alu
chr1	19542310	T	C	9.10228E-06	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	229738170	T	G	0.00168	TAF5L	-	FALSE
chr2	101622889	T	A	0.00022	RPL31	+	FALSE
chr1	21101369	T	C	0.00028	HP1BP3	-	TRUE	AluSc	SINE,Alu
chr7	117832138	G	A	0.00885	LSM8	+	FALSE
chr1	179084080	T	G	0.00926	ABL2	-	FALSE
chr3	69154343	C	G	0.00408	ARL6IP5	+	FALSE
chr1	10517313	T	C	0.00015		.	FALSE	AluJr	SINE,Alu
chr2	183601110	T	G	0.00824	DNAJC10	+	FALSE
chr1	65299564	G	T	0.00664	JAK1	-	FALSE
chr1	10042987	A	G	8.46336E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr4	6644459	C	A	0.00109	MRFAP1	+	FALSE
chr1	78414310	C	A	9.26299E-05	FUBP1	-	FALSE
chr1	26796922	G	C	0.00401	DHDDS	+	FALSE	FLAM_C	SINE,Alu
chr1	10518052	T	C	0.00179		.	FALSE	AluJr	SINE,Alu
chr5	92956173	C	T	0.00646	FAM172A	-	FALSE
chr1	19586458	A	G	2.46370E-10	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	109817245	C	T	2.70011E-05	CELSR2	+	FALSE
chr1	203711876	G	A	0.00444	ATP2B4	+	FALSE
chr1	205112911	T	C	0.00161	DSTYK	-	FALSE
chr7	158719116	A	G	0.00824	WDR60	+	FALSE
chr1	144595886	G	A	0.00242	NBPF20	+	FALSE	AluJb	SINE,Alu
chr5	109190940	T	C	0.00173	MAN2A1	+	FALSE
chr6	160211656	G	T	0.00339	MRPL18	+	FALSE
chr2	37331614	T	C	0.00876		.	FALSE	AluJb	SINE,Alu
chr1	44088556	C	A	0.00260	PTPRF	+	FALSE	A-rich	SINE,Alu
chr15	55609650	T	C	0.00309	PIGBOS1	-	TRUE	AluSg	SINE,Alu
chr8	99053985	T	G	4.76792E-05	RPL30	-	FALSE
chr2	128951094	A	G	0.00415	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr9	133579734	A	G	0.00129	EXOSC2	+	TRUE	AluSx3	SINE,Alu
chr3	197024681	T	C	0.00018	DLG1	-	FALSE
chr5	34906662	T	C	4.70471E-07	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	6282400	T	C	0.00132	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	113455427	T	A	0.00814	SLC16A1	-	FALSE
chr1	10517525	T	C	0.00775		.	FALSE	AluSx1	SINE,Alu
chr6	13788215	T	C	0.00546	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	10517313	T	C	0.00661		.	FALSE	AluJr	SINE,Alu
chr1	6282298	T	C	2.81673E-05	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	229652587	T	C	0.00732	ABCB10	-	FALSE
chr1	566933	A	G	3.50078E-05		.	FALSE
chr6	18264355	G	A	0.00872	DEK	-	FALSE
chr1	11141187	C	G	0.00814	EXOSC10	-	FALSE
chr4	88059663	G	T	0.00165	AFF1	+	FALSE	(GT)n	SINE,Alu
chr9	28403	G	T	1.21037E-06	WASH1	-	FALSE	MIR	SINE,Alu
chr3	170893070	G	A	0.00071	TNIK	-	FALSE
chr1	1431295	T	C	3.55878E-05	ATAD3B	+	FALSE
chr1	38182164	T	A	3.45866E-07	EPHA10	-	FALSE
chr1	36770073	A	T	4.33965E-05	THRAP3	+	FALSE
chr1	1419746	A	G	0.00016	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	184661942	T	G	0.00343	EDEM3	-	FALSE
chr5	81571875	A	T	0.00072	RPS23	-	FALSE
chr1	27992800	C	A	5.71645E-05	IFI6	-	FALSE	FAM	SINE,Alu
chr1	46075168	C	A	0.00155	NASP	+	FALSE	A-rich	SINE,Alu
chr2	242512138	A	G	7.67847E-06	BOK	+	FALSE
chr5	40828076	C	A	0.00900	LOC100506548	-	FALSE
chr2	171699153	C	G	0.00247	GAD1	+	FALSE
chr1	10093371	C	T	0.00264	UBE4B	+	FALSE
chr1	10520450	T	C	0.00070		.	FALSE	AluSx1	SINE,Alu
chr1	19953120	G	A	0.00024	MINOS1,MINOS1-NBL1	+	FALSE
chr1	11141187	C	G	0.00819	EXOSC10	-	FALSE
chr5	125961011	A	G	0.00075	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	46828700	A	G	0.00093	NSUN4	+	FALSE
chr1	120539691	G	T	0.00350	NOTCH2	-	FALSE
chr1	144606963	G	T	0.00080	NBPF20	+	FALSE
chr1	45187511	T	C	7.71832E-06	C1orf228	+	FALSE	U5	SINE,Alu
chr1	145512024	A	G	0.00041	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr5	135391374	C	T	3.54402E-06	TGFBI	+	FALSE
chr3	45960558	C	T	6.37727E-08	FYCO1	-	FALSE
chr3	53265957	T	C	0.00493	TKT	-	FALSE
chr1	16920002	G	C	0.00383	NBPF1	-	FALSE
chr4	248713	A	G	0.00367	ZNF876P	+	FALSE
chr1	28566461	T	C	1.61071E-05		.	FALSE	AluSx1	SINE,Alu
chr12	51325280	A	G	0.00370	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr7	17384880	A	G	0.00027	AHR	+	TRUE	AluSc	SINE,Alu
chr14	50713578	T	C	0.00260	L2HGDH	-	TRUE	AluSx	SINE,Alu
chr1	45474230	G	A	0.00012	HECTD3	-	FALSE
chr2	272203	C	T	0.00064	ACP1	+	FALSE
chr5	35064460	G	C	0.00920	PRLR	-	FALSE
chr3	99517466	G	A	0.00088	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr3	12628920	G	C	3.08728E-06	RAF1	-	FALSE
chr1	1663957	C	T	0.00345	SLC35E2	-	FALSE
chr6	3114457	C	T	0.00320	RIPK1	+	FALSE
chr2	198339559	G	T	0.00712	COQ10B	+	FALSE
chr2	206987561	T	C	0.00235		.	FALSE	AluJb	SINE,Alu
chr2	191555984	T	A	0.00171	NAB1	+	FALSE
chr3	10142949	C	T	0.00612	FANCD2,FANCD2OS	+,-	FALSE
chr3	45721874	A	G	0.00314	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr5	149363214	A	G	0.00040	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr5	96366315	T	C	0.00319		.	FALSE	(TC)n	SINE,Alu
chr1	27216740	G	A	0.00801	GPN2	-	FALSE
chr3	10192811	A	G	0.00149	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	85132772	G	C	5.10736E-05	TMSB10	+	FALSE
chr3	196771049	T	C	0.00010	DLG1	-	FALSE
chr1	36770950	A	G	0.00118	THRAP3	+	FALSE
chr8	48890293	A	G	0.00125	MCM4	+	TRUE	AluJb	SINE,Alu
chr11	94801640	A	C	0.00790	SRSF8	+	FALSE
chr1	144931330	C	T	0.00194	NBPF20,PDE4DIP	+,-	FALSE
chr1	90401416	T	C	6.95799E-05	LRRC8D	+	FALSE
chr4	165998692	T	C	0.00568	TMEM192	-	TRUE	AluSg	SINE,Alu
chr5	37289087	T	C	4.02459E-05		.	FALSE	AluSp	SINE,Alu
chr2	128602974	A	T	4.23982E-05		.	FALSE	AluSp	SINE,Alu
chr5	149829072	G	T	0.00816	RPS14	-	FALSE
chr3	10290515	G	A	0.00904	TATDN2	+	FALSE
chr1	10519912	T	C	0.00613		.	FALSE	AluJr	SINE,Alu
chr5	44826677	G	T	0.00941		.	FALSE	(T)n	SINE,Alu
chr1	77759578	A	G	4.05543E-05	AK5	+	FALSE
chr1	10517691	T	C	9.61087E-05		.	FALSE	AluSx1	SINE,Alu
chr7	131241049	G	A	0.00145	PODXL	-	FALSE	(GGCGAC)n	SINE,Alu
chr1	10517567	T	C	9.16527E-06		.	FALSE	AluSx1	SINE,Alu
chr3	10005392	T	C	8.76084E-06	EMC3	-	FALSE	AluSg7	SINE,Alu
chr1	40214296	A	G	0.00485	PPIE	+	TRUE	AluSq2	SINE,Alu
chr1	197070776	C	T	0.00698	ASPM	-	FALSE
chr1	142688511	T	C	0.00089		.	FALSE
chr1	111489899	C	A	0.00041	LRIF1	-	FALSE
chr3	33186111	T	C	0.00349	CRTAP	+	FALSE	LTR16A1	SINE,Alu
chr12	6572048	A	G	0.00410	VAMP1	-	FALSE
chr3	119212009	G	A	0.00241	POGLUT1	+	FALSE
chr2	128064423	C	T	0.00063	MAP3K2	-	FALSE
chr3	156258319	T	C	0.00012	SSR3	-	TRUE	AluYk3	SINE,Alu
chr17	49042395	T	C	0.00326	SPAG9	-	TRUE	AluJb	SINE,Alu
chr16	10624993	T	C	1.49189E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	19586455	A	G	0.00245	MRTO4	+	TRUE	AluSz	SINE,Alu
chr5	126171974	C	T	0.00867	LMNB1	+	FALSE
chr1	145689537	A	G	0.00341	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr7	20177519	T	C	0.00885	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr3	45721989	A	G	0.00713	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	204520000	A	G	0.00032	MDM4	+	TRUE	Charlie2a	SINE,Alu
chr1	118502757	G	A	0.00793	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr8	146200325	T	C	0.00599	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr2	204055626	G	T	0.00130	NBEAL1	+	FALSE
chr1	33148736	A	G	0.00525	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	6583701	T	C	0.00029	NOL9	-	FALSE
chr16	31469030	T	C	0.00065		.	FALSE	AluSz	SINE,Alu
chr4	17804852	T	C	0.00600	DCAF16	-	TRUE	AluSx	SINE,Alu
chr12	56510698	C	G	0.00019	RPL41	+	FALSE
chr1	145293515	A	G	4.09953E-06	NBPF20,NBPF10	+	FALSE
chr3	195963500	C	T	0.00014		.	FALSE
chr1	788795	T	G	0.00333	LINC01128	+	FALSE	Charlie19a	SINE,Alu
chr3	58292297	T	C	0.00950	RPP14	+	FALSE
chr1	53288916	A	G	0.00289	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr17	12915009	G	A	0.00219	ELAC2	-	FALSE
chr10	33189606	A	G	0.00011	ITGB1	-	FALSE
chr1	53708530	T	C	9.40494E-05	LRP8	-	FALSE	(TA)n	SINE,Alu
chr17	49041732	T	C	0.00135	SPAG9	-	TRUE	AluSx	SINE,Alu
chr16	87440117	C	T	1.93168E-06	ZCCHC14	-	FALSE
chr1	26299050	G	A	0.00110	PAFAH2	-	FALSE
chr1	160175191	A	C	0.00509	LOC729867,PEA15	+,-	FALSE	(GGC)n	SINE,Alu
chr15	42503334	C	T	0.00448	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr1	85785554	C	T	0.00365	DDAH1	-	FALSE
chr4	42022464	C	A	0.00059	SLC30A9	+	FALSE
chr1	23381596	T	C	0.00762	KDM1A	+	FALSE
chr1	65696034	G	C	0.00803	AK4	+	FALSE
chr2	218696215	A	G	0.00915	TNS1	-	FALSE
chr1	1595006	T	C	0.00156	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	12677549	T	A	1.84464E-05	DHRS3	-	FALSE	(A)n	SINE,Alu
chr3	196078364	G	A	6.64958E-05		.	FALSE	GA-rich	SINE,Alu
chr1	145369550	A	G	0.00031	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	46076642	A	G	0.00552	NASP	+	TRUE	AluSx	SINE,Alu
chr7	17384882	A	G	8.88136E-05	AHR	+	TRUE	AluSc	SINE,Alu
chr4	3213832	G	A	0.00012	HTT	+	FALSE
chr1	17299387	T	A	0.00941	CROCC	+	FALSE
chr1	36067784	T	C	0.00083	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	77557891	T	C	0.00557	PIGK	-	FALSE
chr2	37331627	T	C	0.00030		.	FALSE	AluJb	SINE,Alu
chr1	26308882	A	G	3.99595E-05	PAFAH2	-	FALSE
chr1	949608	G	A	0.00416	ISG15	+	FALSE
chr1	15993514	C	T	6.34808E-08		.	FALSE	AluSx4	SINE,Alu
chr1	20976163	C	T	1.02809E-07	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	17394775	G	A	0.00103	PADI2	-	FALSE
chr2	216903621	T	C	0.00611	PECR	-	TRUE	AluSx3	SINE,Alu
chr1	70833400	C	T	0.00224	HHLA3	+	FALSE	LTR7	SINE,Alu
chr1	52817376	T	C	0.00175	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr19	18477761	A	G	0.00461	PGPEP1	+	TRUE	AluJb	SINE,Alu
chr4	170643973	C	T	0.00232	CLCN3	+	FALSE
chr1	160965287	T	C	0.00766	F11R	-	TRUE	AluSc	SINE,Alu
chr1	16893686	G	C	0.00823	NBPF1	-	FALSE
chr1	46774783	A	G	0.00163	UQCRH	+	FALSE	(AGG)n	SINE,Alu
chr1	145688663	T	G	0.00081	NBPF20,NBPF10,RNF115	+	FALSE
chr2	47387307	G	T	0.00035	CALM2	-	FALSE
chr2	24225006	A	G	0.00078		.	FALSE	AluSx	SINE,Alu
chr2	204055454	T	C	0.00293	NBEAL1	+	FALSE
chr1	26143731	A	G	0.00337	SEPN1	+	FALSE	AluSx	SINE,Alu
chr2	98388811	C	G	0.00123	TMEM131	-	FALSE
chr4	88059194	C	T	0.00681	AFF1	+	FALSE
chr1	40219280	T	C	0.00169	PPIE	+	FALSE
chr3	170113718	T	C	0.00316	SKIL	+	FALSE
chr1	100150196	A	G	0.00176	PALMD	+	TRUE	AluJr	SINE,Alu
chr7	36447346	G	A	0.00419	ANLN	+	FALSE
chr1	65330637	C	T	0.00251	JAK1	-	FALSE
chr4	2940462	T	C	6.45116E-07	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr9	139417333	G	A	0.00463	NOTCH1	-	FALSE
chr2	86251151	T	C	0.00763		.	FALSE	AluSx	SINE,Alu
chr12	44181367	G	A	0.00608	IRAK4	+	FALSE	MLT1E1A	SINE,Alu
chr17	17971644	G	T	0.00154	GID4	+	FALSE
chr3	160213318	T	G	0.00215	KPNA4	-	FALSE
chr14	53109677	T	C	5.62031E-05	ERO1A	-	FALSE
chr11	65544575	T	C	0.00200	AP5B1	-	TRUE	AluJb	SINE,Alu
chr4	7761114	G	A	8.00249E-13	AFAP1,AFAP1-AS1	+,-	FALSE
chr11	65179817	T	C	0.00599	FRMD8	+	FALSE
chr5	134062608	G	T	0.00171	SEC24A	+	FALSE
chr1	28823671	T	C	0.00073	PHACTR4	+	FALSE
chr12	80014907	A	T	0.00737	PAWR	-	FALSE
chr1	47905553	G	A	0.00098	FOXD2	+	FALSE
chr5	40832557	G	T	0.00814	RPL37	-	FALSE
chr3	172351006	C	G	6.14326E-06	NCEH1	-	FALSE
chr5	125961623	A	G	6.78430E-09	PHAX	+	TRUE	AluSz6	SINE,Alu
chr2	9630248	G	T	0.00764	ADAM17	-	FALSE
chr1	38279987	T	C	0.00980	MTF1	-	FALSE
chr7	129963777	T	G	0.00874	CPA4	+	FALSE	(TG)n	SINE,Alu
chr1	59121036	A	C	0.00467	MYSM1	-	FALSE
chr1	28598287	C	T	0.00188	SESN2	+	FALSE
chr17	7123232	C	G	0.00250	DLG4,ACADVL	+,-	FALSE
chr1	206516261	C	T	0.00179	SRGAP2	+	FALSE
chr3	63996262	C	T	0.00273	PSMD6-AS2,PSMD6	+,-	FALSE
chr1	153521525	G	A	0.00013	LOC101928034,S100A3	+,-	FALSE
chr1	28864435	A	G	0.00088	RCC1	+	FALSE
chr17	80899281	G	A	0.00053	TBCD	+	FALSE
chr1	27250642	A	G	0.00020	NUDC	+	FALSE
chr1	229631734	T	C	0.00611	NUP133	-	FALSE
chr10	95163809	G	T	0.00453	MYOF	-	FALSE
chr1	28836900	A	G	0.00311	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr17	79780692	T	C	0.00116	MCRIP1	-	TRUE
chr1	145512098	A	G	0.00707	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr4	17802819	T	C	0.00747	DCAF16	-	TRUE	AluSz	SINE,Alu
chr2	63817855	C	G	0.00096	MDH1	+	FALSE
chr1	93307479	C	A	0.00019	FAM69A,RPL5	+,-	FALSE
chr1	16524869	T	C	0.00164	ARHGEF19	-	FALSE
chr2	162849312	G	C	0.00840	DPP4	-	FALSE
chr1	10519951	T	C	0.00378		.	FALSE	AluJr	SINE,Alu
chr12	993930	C	T	0.00163	WNK1	+	FALSE
chr1	203277252	G	A	0.00559	BTG2	+	FALSE
chr1	10519982	T	C	3.22355E-05		.	FALSE	AluJr	SINE,Alu
chr1	168220529	A	G	0.00161		.	FALSE	AluSz6	SINE,Alu
chr1	109746819	A	G	0.00390	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr6	42856056	A	G	0.00602	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	153914500	G	A	3.11507E-05	DENND4B	-	FALSE
chr3	176739159	A	C	0.00304	TBL1XR1	-	FALSE
chr1	20978324	T	G	0.00153	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr1	27678712	A	G	0.00938	SYTL1	+	TRUE	AluSx1	SINE,Alu
chr3	196670098	T	C	0.00019	NCBP2-AS2	+	FALSE

RBP	LSM11
Knock-Method	shRNA
RBP Family	LSM
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR883BXR
Platform	HiSeq
Pubmed ID	32252787

LSM11 - Target Gene Network