| RBP | DAZAP1 |
| Knock-Method | shRNA |
| RBP Family | RRM_1 |
| Biosample Name | HepG2 |
| Tissue Type | Liver |
| Biosample Type | Cell line |
| # of Control | 2 |
| # of Treat | 2 |
| Species | Human |
| Data Source | ENCODE |
| Profile ID | ENCSR220TBR |
| Platform | HiSeq |
| Pubmed ID | 32252787 |
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| Chrom | Site | Ref_allele | Alt_allele | Pvalue | Genename | Strand | KnownRNAediting | RepeatName | RepeatFamily |
|---|---|---|---|---|---|---|---|---|---|
| chr1 | 145282799 | G | A | 0.00081 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr5 | 139931631 | G | C | 0.00138 | SRA1 | - | FALSE | ||
| chr2 | 206987738 | T | C | 0.00859 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 53291420 | A | G | 0.00795 | ZYG11B | + | TRUE | AluJr | SINE,Alu |
| chr2 | 206983491 | T | C | 0.00505 | . | FALSE | AluSx | SINE,Alu | |
| chr4 | 13604418 | G | C | 2.95746E-07 | BOD1L1 | - | FALSE | ||
| chr15 | 33064148 | T | C | 1.59288E-05 | FMN1 | - | FALSE | ||
| chr2 | 240954110 | A | G | 0.00605 | NDUFA10 | - | FALSE | ||
| chr1 | 220231338 | T | C | 0.00762 | RNU5F-1,BPNT1 | +,- | FALSE | AluY | SINE,Alu |
| chr1 | 15909744 | C | T | 0.00225 | AGMAT | - | FALSE | ||
| chr3 | 19992312 | A | G | 0.00798 | RAB5A | + | FALSE | ||
| chr1 | 87328397 | A | T | 0.00252 | SEP15 | - | FALSE | ||
| chr1 | 154128835 | G | T | 0.00032 | TPM3 | - | FALSE | ||
| chr5 | 109204057 | T | A | 0.00614 | MAN2A1 | + | FALSE | ||
| chr3 | 156258283 | T | C | 0.00686 | SSR3 | - | TRUE | AluYk3 | SINE,Alu |
| chr1 | 148003730 | T | C | 0.00636 | NBPF8 | - | TRUE | L1MC4 | SINE,Alu |
| chr1 | 94995411 | C | A | 0.00849 | F3 | - | FALSE | AluSx | SINE,Alu |
| chr1 | 9328106 | A | G | 0.00394 | H6PD | + | TRUE | AluJr | SINE,Alu |
| chr3 | 193385047 | C | T | 0.00259 | OPA1 | + | FALSE | ||
| chr2 | 206986291 | T | C | 0.00143 | . | FALSE | AluSz | SINE,Alu | |
| chr1 | 53289688 | A | G | 0.00069 | ZYG11B | + | TRUE | AluSz | SINE,Alu |
| chr2 | 160659996 | G | A | 0.00177 | LY75-CD302,LY75 | - | FALSE | ||
| chr1 | 10517659 | T | C | 0.00513 | . | FALSE | AluSx1 | SINE,Alu | |
| chr6 | 57034842 | T | G | 0.00581 | ZNF451,LOC101927211 | +,- | FALSE | ||
| chr1 | 25890189 | A | G | 0.00072 | LDLRAP1 | + | FALSE | ||
| chr1 | 150703860 | T | C | 0.00222 | CTSS | - | TRUE | AluSx | SINE,Alu |
| chr13 | 73651653 | G | T | 0.00532 | KLF5 | + | FALSE | ||
| chr1 | 206580084 | C | G | 0.00104 | SRGAP2 | + | FALSE | ||
| chr5 | 137754695 | T | C | 0.00266 | KDM3B | + | FALSE | ||
| chr1 | 33149414 | A | G | 5.81443E-05 | SYNC,RBBP4 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr1 | 55316322 | A | G | 0.00266 | DHCR24 | - | FALSE | ||
| chr1 | 3545194 | C | G | 0.00044 | TPRG1L | + | FALSE | ||
| chr1 | 10043416 | G | A | 0.00052 | NMNAT1 | + | FALSE | AluSx3 | SINE,Alu |
| chr2 | 37331019 | T | C | 0.00033 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 33149508 | A | G | 0.00032 | SYNC,RBBP4 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr19 | 11257634 | T | C | 0.00823 | SPC24 | - | TRUE | AluSp | SINE,Alu |
| chr1 | 94703005 | C | G | 0.00180 | ARHGAP29 | - | FALSE | ||
| chr19 | 9673276 | C | A | 0.00085 | . | FALSE | Tigger1 | SINE,Alu | |
| chr2 | 37330614 | T | C | 0.00410 | . | FALSE | AluSq2 | SINE,Alu | |
| chr15 | 42550445 | T | C | 0.00360 | TMEM87A | - | FALSE | ||
| chr1 | 155695998 | A | G | 0.00078 | DAP3 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 245017464 | T | A | 0.00314 | HNRNPU,SNORA100 | - | FALSE | ||
| chr17 | 37005835 | T | C | 2.39380E-05 | . | FALSE | AluSg | SINE,Alu | |
| chr2 | 128949255 | A | G | 0.00063 | UGGT1 | + | TRUE | AluSg | SINE,Alu |
| chr19 | 42375586 | A | G | 0.00404 | . | FALSE | AluSx | SINE,Alu | |
| chr2 | 220037666 | A | G | 0.00796 | CNPPD1 | - | FALSE | ||
| chr5 | 17276848 | C | A | 0.00634 | BASP1 | + | FALSE | (A)n | SINE,Alu |
| chr4 | 26432834 | G | A | 0.00167 | RBPJ | + | FALSE | (A)n | SINE,Alu |
| chr4 | 128758175 | A | G | 0.00385 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 109818161 | C | T | 0.00864 | CELSR2 | + | FALSE | ||
| chr13 | 52327020 | G | A | 0.00019 | WDFY2 | + | FALSE | ||
| chr1 | 32372387 | A | C | 0.00757 | PTP4A2 | - | FALSE | (CA)n | SINE,Alu |
| chr1 | 27107950 | G | A | 0.00249 | ARID1A | + | FALSE | ||
| chr1 | 6584872 | T | C | 9.65243E-06 | NOL9 | - | TRUE | AluYk2 | SINE,Alu |
| chr1 | 35648710 | G | C | 0.00377 | SFPQ | - | FALSE | ||
| chr1 | 1345051 | A | G | 0.00362 | . | FALSE | AluSg | SINE,Alu | |
| chr1 | 19543353 | T | C | 0.00036 | LOC101927895,EMC1 | +,- | FALSE | AluJb | SINE,Alu |
| chr1 | 153720690 | G | A | 0.00786 | INTS3 | + | FALSE | ||
| chr1 | 204521160 | A | G | 0.00231 | MDM4 | + | TRUE | AluSp | SINE,Alu |
| chr17 | 28963296 | A | G | 0.00572 | LOC107133515 | + | TRUE | AluJr4 | SINE,Alu |
| chr2 | 37331546 | T | C | 0.00694 | . | FALSE | AluJb | SINE,Alu | |
| chr2 | 201253956 | A | G | 0.00071 | SPATS2L | + | FALSE | ||
| chr1 | 10044366 | A | G | 0.00531 | NMNAT1 | + | TRUE | AluSx1 | SINE,Alu |
| chr19 | 49121788 | T | C | 0.00017 | RPL18 | - | FALSE | ||
| chr1 | 197053373 | G | A | 0.00124 | ASPM | - | FALSE | ||
| chr10 | 129910475 | T | G | 0.00061 | MKI67 | - | FALSE | ||
| chr12 | 124105948 | C | T | 0.00778 | EIF2B1 | - | FALSE | ||
| chr1 | 21810586 | C | T | 0.00540 | NBPF3 | + | FALSE | ||
| chr3 | 170021211 | A | C | 3.61705E-05 | PRKCI | + | FALSE | ||
| chr3 | 196660344 | T | A | 0.00022 | SENP5 | + | FALSE | ||
| chr1 | 206578650 | G | C | 0.00159 | SRGAP2 | + | FALSE | ||
| chr7 | 6064012 | T | C | 0.00240 | EIF2AK1 | - | FALSE | ||
| chrX | 77083614 | T | C | 6.82446E-05 | MAGT1 | - | TRUE | AluSz6 | SINE,Alu |
| chr1 | 1345006 | A | G | 0.00123 | . | FALSE | AluSg | SINE,Alu | |
| chr1 | 45187511 | T | C | 7.71832E-06 | C1orf228 | + | FALSE | U5 | SINE,Alu |
| chr1 | 16894497 | C | T | 0.00454 | NBPF1 | - | FALSE | ||
| chr1 | 144917841 | T | C | 4.47769E-05 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr1 | 153963246 | G | A | 6.32081E-05 | RPS27 | + | FALSE | ||
| chr15 | 23283141 | C | A | 0.00056 | HERC2P2 | - | FALSE | ||
| chr1 | 6283260 | T | C | 0.00054 | ICMT | - | TRUE | AluSx3 | SINE,Alu |
| chr2 | 196600548 | G | T | 0.00036 | SLC39A10 | + | FALSE | ||
| chr7 | 6501833 | A | T | 0.00032 | KDELR2 | - | FALSE | ||
| chr1 | 144822920 | A | T | 0.00040 | NBPF20,NBPF9 | + | FALSE | ||
| chr1 | 43629982 | C | T | 0.00118 | EBNA1BP2 | - | FALSE | ||
| chr4 | 77082799 | G | C | 0.00148 | SCARB2 | - | FALSE | ||
| chr1 | 44088547 | C | A | 0.00018 | PTPRF | + | FALSE | A-rich | SINE,Alu |
| chr1 | 145513114 | A | G | 6.80046E-05 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | AluSz6 | SINE,Alu |
| chr1 | 22400707 | C | G | 0.00158 | CDC42 | + | FALSE | AluSc8 | SINE,Alu |
| chr7 | 128143797 | A | G | 4.50405E-06 | . | FALSE | AluSq2 | SINE,Alu | |
| chr2 | 84670484 | T | C | 0.00324 | SUCLG1 | - | TRUE | ||
| chr19 | 10602447 | C | T | 0.00878 | KEAP1 | - | FALSE | ||
| chr2 | 50147867 | T | A | 0.00896 | NRXN1 | - | FALSE | (GT)n | SINE,Alu |
| chr1 | 36067925 | T | C | 1.81623E-06 | PSMB2 | - | TRUE | AluSz | SINE,Alu |
| chr1 | 19578192 | G | A | 0.00246 | MRTO4 | + | FALSE | ||
| chr1 | 16889413 | T | C | 1.64789E-05 | NBPF1 | - | TRUE | L1MC4 | SINE,Alu |
| chr1 | 1650801 | T | C | 1.21097E-05 | CDK11B,CDK11A | - | FALSE | ||
| chr9 | 133579674 | A | G | 0.00018 | EXOSC2 | + | TRUE | AluSx3 | SINE,Alu |
| chr3 | 156259331 | T | C | 0.00088 | SSR3 | - | TRUE | AluSq2 | SINE,Alu |
| chr1 | 36522460 | A | G | 0.00407 | . | FALSE | AluSc | SINE,Alu | |
| chr1 | 207247477 | T | C | 2.68116E-05 | PFKFB2 | + | FALSE | MER5B | SINE,Alu |
| chr14 | 90509564 | C | T | 0.00552 | TDP1 | + | FALSE | ||
| chr8 | 42043493 | G | A | 0.00045 | PLAT | - | FALSE | MLT2C1 | SINE,Alu |
| chr1 | 145116141 | G | A | 0.00266 | NBPF20,SEC22B | + | FALSE | ||
| chr9 | 117050998 | G | A | 0.00326 | COL27A1 | + | FALSE | ||
| chr1 | 54382632 | T | C | 0.00219 | . | FALSE | AluSq2 | SINE,Alu | |
| chr4 | 120979130 | T | C | 0.00729 | . | FALSE | AluSg4 | SINE,Alu | |
| chr1 | 179042616 | A | G | 1.60543E-05 | FAM20B | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 168220364 | A | G | 6.18665E-05 | . | FALSE | AluSz6 | SINE,Alu | |
| chr1 | 153700841 | A | G | 0.00508 | INTS3 | + | FALSE | ||
| chr17 | 53470462 | C | T | 0.00230 | MMD | - | FALSE | ||
| chr1 | 161932324 | A | G | 0.00356 | ATF6 | + | FALSE | ||
| chr13 | 30780287 | C | T | 0.00748 | KATNAL1 | - | FALSE | AluSx1 | SINE,Alu |
| chr2 | 101893244 | C | A | 0.00332 | RNF149 | - | FALSE | (A)n | SINE,Alu |
| chr3 | 179115501 | A | T | 1.86203E-06 | GNB4 | - | FALSE | ||
| chr15 | 65442647 | T | C | 2.02205E-07 | CLPX | - | TRUE | AluSg4 | SINE,Alu |
| chr1 | 33066960 | A | G | 0.00079 | ZBTB8A | + | TRUE | AluSq4 | SINE,Alu |
| chr1 | 28939803 | C | T | 1.99823E-11 | TAF12 | - | FALSE | ||
| chr1 | 36068184 | T | C | 0.00177 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr3 | 50686350 | T | G | 2.12445E-05 | MAPKAPK3 | + | FALSE | ||
| chr1 | 142688597 | C | T | 0.00605 | . | FALSE | |||
| chr1 | 70696606 | C | A | 0.00362 | SRSF11 | + | FALSE | ||
| chr1 | 116237273 | A | G | 0.00309 | VANGL1 | + | FALSE | ||
| chr17 | 42876808 | T | C | 0.00147 | GJC1 | - | TRUE | AluSz6 | SINE,Alu |
| chr1 | 117945049 | G | A | 0.00030 | MAN1A2 | + | FALSE | ||
| chr12 | 133297966 | A | G | 0.00000 | PGAM5 | + | FALSE | AluJo | SINE,Alu |
| chr1 | 10520669 | T | C | 0.00963 | DFFA | - | FALSE | AluSc8 | SINE,Alu |
| chr2 | 102508655 | G | T | 0.00817 | MAP4K4 | + | FALSE | ||
| chr2 | 100899665 | G | A | 0.00758 | LONRF2 | - | FALSE | ||
| chr1 | 145511962 | A | G | 0.00187 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | AluY | SINE,Alu |
| chr1 | 28825337 | A | G | 0.00167 | PHACTR4 | + | TRUE | AluSg | SINE,Alu |
| chr1 | 206566195 | C | T | 0.00706 | SRGAP2 | + | FALSE | ||
| chr11 | 94606941 | T | C | 0.00699 | AMOTL1 | + | FALSE | ||
| chr4 | 2940164 | T | C | 0.00115 | NOP14-AS1,NOP14 | +,- | FALSE | AluSp | SINE,Alu |
| chr2 | 204312707 | C | T | 0.00154 | RAPH1 | - | FALSE | ||
| chr4 | 187628395 | T | A | 0.00000 | FAT1 | - | FALSE | ||
| chr1 | 46076529 | A | G | 0.00196 | NASP | + | TRUE | AluSx | SINE,Alu |
| chr2 | 164466039 | A | C | 0.00456 | FIGN | - | FALSE | ||
| chr1 | 19984461 | C | T | 0.00090 | MINOS1-NBL1,NBL1 | + | FALSE | ||
| chr3 | 120114128 | A | C | 6.21214E-12 | FSTL1 | - | FALSE | ||
| chr1 | 27481039 | A | G | 0.00021 | SLC9A1 | - | FALSE | ||
| chr1 | 184761312 | T | C | 0.00443 | FAM129A | - | TRUE | AluJo | SINE,Alu |
| chr10 | 96090672 | A | G | 0.00018 | . | FALSE | |||
| chr1 | 36068276 | T | C | 0.00110 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr1 | 35319550 | C | T | 0.00781 | SMIM12 | - | FALSE | AluSg | SINE,Alu |
| chr11 | 768386 | T | C | 0.00208 | PDDC1 | - | TRUE | AluSc | SINE,Alu |
| chr2 | 37329238 | T | C | 0.00754 | . | FALSE | AluJr4 | SINE,Alu | |
| chr1 | 9161231 | T | C | 0.00481 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 19586135 | C | T | 0.00063 | MRTO4 | + | FALSE | ||
| chr16 | 74655591 | T | G | 0.00652 | RFWD3 | - | FALSE | AluSx | SINE,Alu |
| chr1 | 118502685 | T | A | 0.00333 | WDR3,SPAG17 | +,- | FALSE | ||
| chr1 | 145500933 | C | T | 0.00982 | NBPF20,NBPF10,LIX1L | + | FALSE | ||
| chr1 | 36067760 | T | C | 1.59237E-06 | PSMB2 | - | TRUE | AluSz | SINE,Alu |
| chr2 | 118589029 | T | G | 0.00058 | DDX18 | + | FALSE | ||
| chr16 | 66765441 | G | T | 4.44089E-16 | DYNC1LI2 | - | FALSE | L2c | SINE,Alu |
| chr21 | 34728175 | A | G | 6.62284E-07 | IFNAR1 | + | TRUE | AluSc | SINE,Alu |
| chr3 | 125033835 | T | G | 0.00385 | ZNF148 | - | FALSE | AluJb | SINE,Alu |
| chr1 | 32508478 | C | T | 0.00509 | KHDRBS1 | + | FALSE | ||
| chr12 | 96661613 | A | G | 0.00183 | ELK3 | + | FALSE | ||
| chr1 | 21808159 | G | A | 9.34000E-05 | NBPF3 | + | FALSE | ||
| chr1 | 10517689 | T | C | 0.00504 | . | FALSE | AluSx1 | SINE,Alu | |
| chr3 | 20025661 | C | T | 4.83976E-05 | RAB5A,PP2D1 | +,- | FALSE | ||
| chr3 | 172365720 | C | T | 3.67728E-06 | NCEH1 | - | FALSE | ||
| chr3 | 49395693 | C | G | 0.00243 | GPX1 | - | FALSE | (GCC)n | SINE,Alu |
| chr1 | 45975286 | A | G | 0.00200 | MMACHC | + | TRUE | AluSg7 | SINE,Alu |
| chr1 | 146651038 | T | G | 0.00964 | PDIA3P1 | + | FALSE | ||
| chr3 | 191075902 | C | T | 1.38271E-08 | CCDC50 | + | FALSE | ||
| chr4 | 2951804 | A | G | 7.08227E-08 | NOP14-AS1,NOP14 | +,- | FALSE | ||
| chr1 | 36068184 | T | C | 0.00150 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr1 | 38280010 | C | T | 0.00990 | MTF1 | - | FALSE | ||
| chr14 | 75202704 | A | G | 2.33511E-06 | FCF1 | + | TRUE | AluSc | SINE,Alu |
| chr1 | 9644847 | A | G | 0.00672 | . | FALSE | AluJr | SINE,Alu | |
| chr6 | 42856954 | A | G | 0.00037 | RPL7L1 | + | TRUE | AluSp | SINE,Alu |
| chr6 | 31947917 | C | T | 0.00670 | . | FALSE | |||
| chr1 | 161088583 | T | G | 0.00822 | NIT1 | + | FALSE | ||
| chr1 | 67874696 | T | C | 0.00014 | SERBP1 | - | TRUE | AluSx3 | SINE,Alu |
| chr6 | 149915565 | A | G | 0.00198 | RPS18P9 | + | FALSE | ||
| chr6 | 114182783 | A | G | 0.00442 | MARCKS | + | FALSE | ||
| chr8 | 48890114 | A | G | 2.61683E-11 | MCM4 | + | TRUE | AluJb | SINE,Alu |
| chr2 | 29170763 | G | A | 5.21672E-05 | WDR43 | + | FALSE | ||
| chr1 | 92976590 | G | A | 0.00768 | EVI5 | - | FALSE | ||
| chr1 | 153920564 | A | G | 0.00057 | CRTC2 | - | FALSE | ||
| chr19 | 29703961 | A | C | 0.00226 | UQCRFS1 | - | FALSE | ||
| chr1 | 165877666 | T | C | 0.00189 | UCK2 | + | FALSE | (T)n | SINE,Alu |
| chr1 | 179326847 | A | G | 0.00577 | SOAT1 | + | TRUE | AluJo | SINE,Alu |
| chr1 | 70718269 | A | G | 0.00234 | . | FALSE | |||
| chr16 | 88785189 | T | C | 0.00636 | PIEZO1 | - | TRUE | AluJr | SINE,Alu |
| chr7 | 128143289 | A | G | 0.00082 | . | FALSE | AluSc8 | SINE,Alu | |
| chr1 | 27204515 | T | C | 0.00337 | . | FALSE | AluSg7 | SINE,Alu | |
| chr1 | 179813613 | T | C | 0.00595 | TOR1AIP2 | - | FALSE | ||
| chr3 | 196769982 | C | G | 0.00131 | DLG1 | - | FALSE | ||
| chr1 | 26901090 | C | T | 0.00952 | RPS6KA1 | + | FALSE | ||
| chr16 | 19725719 | C | T | 0.00471 | KNOP1 | - | FALSE | ||
| chr5 | 149363214 | A | G | 6.58903E-07 | SLC26A2 | + | TRUE | AluJr | SINE,Alu |
| chr1 | 36068294 | T | C | 0.00321 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr2 | 55462102 | A | G | 0.00026 | RPS27A | + | FALSE | ||
| chr19 | 39433138 | G | A | 0.00276 | FBXO17 | - | FALSE | AluJb | SINE,Alu |
| chr4 | 89181478 | T | C | 0.00656 | PPM1K | - | TRUE | AluSx1 | SINE,Alu |
| chr1 | 36067749 | T | C | 0.00735 | PSMB2 | - | TRUE | AluSz | SINE,Alu |
| chr2 | 189877305 | T | C | 0.00612 | COL3A1 | + | FALSE | ||
| chr1 | 16933583 | T | C | 0.00050 | NBPF1 | - | FALSE | GA-rich | SINE,Alu |
| chr1 | 145512166 | T | A | 0.00823 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | AluY | SINE,Alu |
| chr17 | 4930749 | A | G | 0.00025 | KIF1C | + | TRUE | FLAM_A | SINE,Alu |
| chr16 | 23536684 | T | C | 0.00012 | EARS2 | - | FALSE | ||
| chr1 | 9330479 | C | T | 0.00027 | H6PD | + | FALSE | ||
| chr1 | 11347164 | A | C | 0.00667 | UBIAD1 | + | FALSE | ||
| chr19 | 11256689 | T | C | 9.47404E-06 | SPC24 | - | TRUE | AluJr4 | SINE,Alu |
| chr3 | 4403394 | A | G | 0.00388 | SUMF1 | - | FALSE | ||
| chr1 | 38327586 | C | T | 0.00198 | INPP5B | - | FALSE | AluSx3 | SINE,Alu |
| chr1 | 231154918 | G | T | 0.00022 | FAM89A | - | FALSE | (T)n | SINE,Alu |
| chr14 | 74526155 | T | C | 0.00054 | BBOF1,ALDH6A1 | +,- | FALSE | AluSp | SINE,Alu |
| chr4 | 160279820 | C | T | 0.00354 | RAPGEF2 | + | FALSE | ||
| chr1 | 6283418 | T | C | 0.00464 | ICMT | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 145369556 | A | G | 0.00061 | NBPF20,NBPF10 | + | TRUE | L1MC4 | SINE,Alu |
| chr4 | 123859284 | C | T | 0.00034 | SPATA5 | + | FALSE | ||
| chr1 | 19543247 | T | C | 5.23836E-05 | LOC101927895,EMC1 | +,- | FALSE | AluJb | SINE,Alu |
| chr7 | 17384334 | A | G | 0.00013 | AHR | + | TRUE | AluSx | SINE,Alu |
| chr1 | 2326812 | A | G | 0.00709 | RER1 | + | FALSE | ||
| chr2 | 206981832 | T | C | 0.00251 | . | FALSE | AluJb | SINE,Alu | |
| chr2 | 37329300 | T | C | 0.00590 | . | FALSE | AluJr4 | SINE,Alu | |
| chr1 | 116237273 | A | G | 0.00814 | VANGL1 | + | FALSE | ||
| chr6 | 31506635 | T | G | 6.78064E-05 | . | FALSE | |||
| chr4 | 39550978 | T | C | 3.11849E-06 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 66058513 | A | G | 0.00091 | LEPR | + | FALSE | ||
| chr4 | 42091668 | A | G | 0.00430 | . | FALSE | AluSp | SINE,Alu | |
| chr3 | 141879810 | T | C | 0.00348 | GK5 | - | FALSE | AluJr | SINE,Alu |
| chr12 | 10311410 | A | G | 0.00909 | OLR1 | - | FALSE | ||
| chr1 | 113455441 | C | A | 0.00020 | SLC16A1 | - | FALSE | (A)n | SINE,Alu |
| chr1 | 207942472 | A | G | 2.11430E-05 | CD46 | + | TRUE | AluSg4 | SINE,Alu |
| chr1 | 25894460 | T | A | 0.00520 | LDLRAP1 | + | FALSE | MIRb | SINE,Alu |
| chr2 | 3627302 | A | T | 0.00021 | RPS7 | + | FALSE | ||
| chr1 | 1636355 | A | G | 0.00857 | CDK11B,CDK11A | - | FALSE | ||
| chr1 | 179044206 | A | G | 0.00015 | FAM20B | + | TRUE | AluSx | SINE,Alu |
| chr1 | 19542401 | T | C | 0.00077 | LOC101927895,EMC1 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 28826190 | A | G | 0.00233 | PHACTR4 | + | TRUE | AluJb | SINE,Alu |
| chr6 | 26095468 | A | G | 0.00980 | HFE | + | TRUE | AluY | SINE,Alu |
| chr1 | 109856391 | G | C | 0.00569 | SORT1 | - | FALSE | ||
| chr11 | 76637680 | G | A | 0.00011 | ACER3 | + | FALSE | ||
| chr5 | 179157298 | T | G | 0.00816 | CANX | + | FALSE | ||
| chr8 | 141461185 | A | G | 0.00793 | TRAPPC9 | - | FALSE | ||
| chr4 | 170037423 | G | T | 0.00802 | SH3RF1 | - | FALSE | ||
| chr2 | 61369944 | T | C | 0.00024 | LOC339803 | - | TRUE | AluSx | SINE,Alu |
| chr1 | 144053664 | A | C | 0.00050 | . | FALSE | |||
| chr1 | 71531596 | A | G | 1.07667E-05 | ZRANB2-AS1,ZRANB2 | +,- | FALSE | ||
| chr3 | 57612271 | T | C | 0.00831 | DENND6A,PDE12 | +,- | FALSE | AluSp | SINE,Alu |
| chr1 | 114940209 | G | T | 0.00638 | TRIM33 | - | FALSE | (T)n | SINE,Alu |
| chr2 | 36704034 | A | G | 9.89157E-05 | CRIM1 | + | FALSE | ||
| chr1 | 990984 | G | A | 0.00018 | AGRN | + | FALSE | ||
| chr1 | 45976723 | T | C | 0.00340 | MMACHC,PRDX1 | +,- | FALSE | ||
| chr2 | 61276750 | A | G | 0.00231 | PEX13 | + | TRUE | AluSp | SINE,Alu |
| chr2 | 3502198 | T | A | 0.00764 | ADI1 | - | FALSE | ||
| chr6 | 31321883 | G | A | 0.00000 | . | FALSE | |||
| chr1 | 1417974 | C | T | 0.00677 | ATAD3B | + | FALSE | ||
| chr1 | 89887603 | C | T | 0.00308 | GBP1P1 | + | FALSE | ||
| chr1 | 16577908 | G | C | 0.00686 | FBXO42 | - | FALSE | ||
| chr5 | 93018884 | A | C | 0.00538 | FAM172A | - | FALSE | (TCA)n | SINE,Alu |
| chr3 | 88191456 | C | A | 0.00694 | CGGBP1,ZNF654 | +,- | FALSE | ||
| chr5 | 112350098 | C | T | 7.36383E-05 | DCP2 | + | FALSE | ||
| chr1 | 183515428 | G | A | 0.00232 | SMG7 | + | FALSE | ||
| chr1 | 70833400 | C | T | 0.00224 | HHLA3 | + | FALSE | LTR7 | SINE,Alu |
| chr1 | 24286327 | G | A | 0.00053 | PNRC2 | + | FALSE | ||
| chr1 | 179044110 | A | G | 5.39593E-06 | FAM20B | + | TRUE | AluSx | SINE,Alu |
| chr3 | 183209052 | T | C | 0.00041 | KLHL6 | - | TRUE | AluSq | SINE,Alu |
| chr1 | 201434740 | G | A | 0.00471 | PHLDA3 | - | FALSE | ||
| chr6 | 38140503 | C | T | 0.00065 | BTBD9 | - | FALSE | ||
| chr1 | 16891340 | T | A | 0.00404 | NBPF1 | - | FALSE | ||
| chr1 | 25168124 | G | C | 0.00669 | CLIC4 | + | FALSE | ||
| chr2 | 99812447 | A | G | 0.00525 | MRPL30 | + | TRUE | AluSx | SINE,Alu |
| chr2 | 37331525 | T | C | 0.00020 | . | FALSE | AluJb | SINE,Alu | |
| chr4 | 84215880 | T | C | 4.10546E-05 | HPSE | - | TRUE | AluJr | SINE,Alu |
| chr1 | 117644949 | C | G | 0.00862 | TTF2 | + | FALSE | ||
| chr1 | 78414329 | G | A | 0.00922 | FUBP1 | - | FALSE | A-rich | SINE,Alu |
| chr9 | 37503313 | A | G | 0.00584 | POLR1E | + | TRUE | AluJb | SINE,Alu |
| chr1 | 16133978 | T | C | 0.00515 | UQCRHL | - | FALSE | ||
| chr1 | 1534826 | C | T | 0.00382 | FNDC10 | - | FALSE | ||
| chr16 | 88789702 | G | A | 0.00125 | PIEZO1 | - | FALSE | ||
| chr2 | 204162277 | A | G | 0.00097 | CYP20A1 | + | TRUE | AluSx | SINE,Alu |
| chr4 | 56298300 | G | A | 7.51019E-06 | CLOCK | - | FALSE | ||
| chr3 | 197400501 | C | G | 0.00270 | RUBCN | - | FALSE | ||
| chr6 | 42856905 | A | G | 4.80826E-12 | RPL7L1 | + | TRUE | AluSp | SINE,Alu |
| chr5 | 95223443 | C | T | 0.00255 | ELL2 | - | FALSE | ||
| chr1 | 179326315 | A | G | 0.00187 | SOAT1 | + | TRUE | ||
| chr1 | 12628188 | T | C | 3.43513E-08 | DHRS3 | - | FALSE | ||
| chr1 | 36068052 | G | T | 1.43241E-12 | PSMB2 | - | FALSE | L1ME4b | SINE,Alu |
| chr3 | 63987389 | T | C | 0.00662 | ATXN7 | + | FALSE | ||
| chr1 | 45975345 | A | G | 0.00127 | MMACHC | + | TRUE | AluSg7 | SINE,Alu |
| chr1 | 145689843 | A | G | 4.95254E-05 | NBPF20,NBPF10 | + | TRUE | AluJb | SINE,Alu |
| chr1 | 22148474 | T | C | 0.00089 | LDLRAD2 | + | FALSE | MIRb | SINE,Alu |
| chr2 | 215674224 | G | A | 9.97816E-05 | BARD1 | - | FALSE | ||
| chr1 | 28834154 | G | T | 0.00012 | SNHG3,RCC1 | + | FALSE | AluSg | SINE,Alu |
| chr1 | 46077345 | A | G | 0.00024 | NASP | + | TRUE | AluSc8 | SINE,Alu |
| chr5 | 178508569 | C | T | 0.00571 | ZNF354C | + | FALSE | ||
| chr2 | 25042625 | C | G | 0.00766 | CENPO,ADCY3 | +,- | FALSE | ||
| chr2 | 152976703 | T | A | 0.00217 | STAM2 | - | FALSE | ||
| chr1 | 100549715 | T | A | 0.00765 | SASS6 | - | FALSE | ||
| chr21 | 33974092 | G | C | 0.00865 | C21orf59 | - | FALSE | ||
| chr3 | 10192694 | A | G | 0.00277 | VHL | + | TRUE | AluSx1 | SINE,Alu |
| chr2 | 242512159 | A | G | 0.00243 | BOK | + | FALSE | ||
| chr1 | 38423199 | A | T | 0.00192 | SF3A3 | - | FALSE | AluJo | SINE,Alu |
| chr1 | 67874697 | T | C | 0.00119 | SERBP1 | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 144868170 | C | T | 0.00415 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr1 | 203098275 | T | G | 0.00942 | ADORA1 | + | FALSE | ||
| chr16 | 10623543 | T | C | 0.00025 | EMP2 | - | TRUE | AluSp | SINE,Alu |
| chr1 | 117530213 | G | T | 0.00256 | PTGFRN | + | FALSE | ||
| chr1 | 28864435 | A | G | 0.00088 | RCC1 | + | FALSE | ||
| chr8 | 143352206 | T | C | 0.00500 | TSNARE1 | - | FALSE | ||
| chr1 | 19953132 | C | A | 0.00910 | MINOS1,MINOS1-NBL1 | + | FALSE | ||
| chr4 | 165999188 | T | C | 0.00751 | TMEM192 | - | TRUE | FLAM_C | SINE,Alu |
| chr1 | 1469546 | G | A | 0.00300 | ATAD3A | + | FALSE | ||
| chr1 | 33148691 | A | G | 2.12433E-06 | SYNC,RBBP4 | +,- | FALSE | AluSc | SINE,Alu |
| chr2 | 217366919 | A | G | 0.00480 | . | FALSE | AluSz6 | SINE,Alu | |
| chr1 | 145273431 | A | G | 7.55666E-05 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr2 | 9770610 | A | G | 0.00486 | YWHAQ | - | FALSE | ||
| chr1 | 2522392 | G | A | 0.00227 | FAM213B,MMEL1 | +,- | FALSE | ||
| chr1 | 16889563 | C | A | 0.00037 | NBPF1 | - | FALSE | ||
| chr9 | 139417333 | G | A | 0.00463 | NOTCH1 | - | FALSE | ||
| chr1 | 10520296 | T | C | 0.00765 | . | FALSE | AluSx | SINE,Alu | |
| chr7 | 20178420 | T | C | 0.00053 | MACC1,LOC101927668 | - | TRUE | AluY | SINE,Alu |
| chr1 | 144931727 | G | A | 0.00037 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr20 | 18468511 | T | C | 0.00129 | RBBP9 | - | TRUE | AluSz6 | SINE,Alu |
| chr1 | 164473 | T | C | 0.00152 | . | FALSE | AluSq2 | SINE,Alu | |
| chr1 | 28865502 | G | A | 0.00073 | RCC1 | + | FALSE | ||
| chr1 | 54692334 | T | C | 5.22151E-05 | SSBP3 | - | FALSE | (T)n | SINE,Alu |
| chr1 | 1469546 | G | A | 0.00331 | ATAD3A | + | FALSE | ||
| chr1 | 9163405 | T | C | 0.00014 | . | FALSE | AluSp | SINE,Alu | |
| chr6 | 143661166 | A | C | 0.00536 | AIG1 | + | FALSE | ||
| chr17 | 38512480 | C | T | 0.00725 | RARA | + | FALSE | ||
| chr1 | 234740975 | G | A | 0.00106 | IRF2BP2 | - | FALSE | ||
| chr22 | 17129526 | A | G | 0.00485 | TPTEP1 | + | TRUE | AluSz | SINE,Alu |
| chr17 | 74560728 | A | G | 0.00510 | SNHG16 | + | FALSE | THE1B | SINE,Alu |
| chr1 | 1344998 | A | G | 0.00461 | . | FALSE | AluSg | SINE,Alu | |
| chr1 | 52498139 | A | G | 0.00193 | TXNDC12,KTI12 | - | FALSE | ||
| chr1 | 110136683 | A | C | 0.00183 | GNAI3 | + | FALSE | ||
| chr1 | 21806710 | T | G | 0.00194 | NBPF3 | + | FALSE | ||
| chr19 | 54627915 | C | T | 0.00015 | PRPF31 | + | FALSE | ||
| chr5 | 177019207 | T | G | 0.00584 | TMED9 | + | FALSE | ||
| chr9 | 115446659 | T | C | 0.00410 | INIP | - | TRUE | AluJr | SINE,Alu |
| chr9 | 89626839 | T | G | 0.00016 | LOC440173 | - | FALSE | ||
| chr1 | 26887592 | T | C | 0.00354 | RPS6KA1 | + | FALSE | ||
| chr6 | 109785887 | T | C | 7.14632E-06 | MICAL1,ZBTB24 | - | TRUE | AluJr | SINE,Alu |
| chr7 | 77409288 | A | G | 7.47972E-05 | . | FALSE | AluSc | SINE,Alu | |
| chr3 | 167727417 | C | T | 2.31470E-08 | GOLIM4 | - | FALSE | ||
| chr1 | 144918957 | T | A | 0.00484 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr10 | 1086810 | T | A | 0.00245 | IDI2-AS1,IDI1 | +,- | FALSE | ||
| chr2 | 174090339 | A | C | 2.67746E-05 | ZAK,MLK7-AS1 | +,- | FALSE | AluSx | SINE,Alu |
| chr6 | 109785909 | T | C | 0.00556 | MICAL1,ZBTB24 | - | TRUE | AluJr | SINE,Alu |
| chr1 | 165877575 | A | C | 0.00839 | UCK2 | + | FALSE | ||
| chrX | 2825119 | T | C | 0.00670 | ARSD | - | TRUE | AluSx1 | SINE,Alu |
| chr2 | 37429627 | A | G | 0.00027 | CEBPZOS,CEBPZ | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 9162348 | T | C | 0.00824 | . | FALSE | AluSx | SINE,Alu | |
| chr2 | 232319613 | C | T | 0.00022 | NCL | - | FALSE | ||
| chr12 | 72096330 | A | G | 0.00014 | TMEM19 | + | TRUE | AluSz6 | SINE,Alu |
| chr17 | 65334986 | T | C | 1.42836E-05 | PSMD12 | - | TRUE | AluSq | SINE,Alu |
| chr1 | 23833608 | G | A | 0.00890 | E2F2 | - | FALSE | ||
| chr1 | 1255412 | C | A | 0.00751 | CPSF3L | - | FALSE | (GCAGG)n | SINE,Alu |
| chr17 | 67538540 | T | C | 0.00295 | . | FALSE | |||
| chrX | 84532996 | T | G | 0.00801 | POF1B | - | FALSE | ||
| chr1 | 10520178 | T | C | 2.78615E-06 | . | FALSE | AluSx | SINE,Alu | |
| chr7 | 2473753 | C | T | 0.00806 | CHST12 | + | FALSE | (CCGC)n | SINE,Alu |
| chr1 | 55541174 | A | G | 0.00038 | USP24 | - | FALSE | ||
| chr2 | 217366673 | A | G | 0.00517 | . | FALSE | AluSz | SINE,Alu | |
| chr1 | 52817434 | T | C | 0.00799 | CC2D1B | - | TRUE | AluSg4 | SINE,Alu |
| chr3 | 93780109 | G | C | 8.09346E-05 | DHFR2 | - | FALSE | ||
| chr21 | 18940466 | A | T | 0.00169 | CXADR | + | FALSE | AluY | SINE,Alu |
| chr1 | 67874697 | T | C | 0.00186 | SERBP1 | - | TRUE | AluSx3 | SINE,Alu |
| chr3 | 15456307 | T | C | 0.00939 | METTL6 | - | TRUE | AluJr | SINE,Alu |
| chr2 | 128601583 | T | C | 0.00550 | . | FALSE | AluJr | SINE,Alu | |
| chr19 | 11257673 | T | C | 0.00211 | SPC24 | - | TRUE | AluSp | SINE,Alu |
| chr7 | 44618448 | A | G | 0.00962 | TMED4 | - | FALSE | AluSq2 | SINE,Alu |
| chr1 | 1717439 | T | A | 0.00663 | GNB1 | - | FALSE | ||
| chr1 | 6283434 | T | C | 4.87712E-06 | ICMT | - | TRUE | AluSx3 | SINE,Alu |
| chr2 | 99812843 | A | G | 0.00966 | MRPL30 | + | TRUE | AluJb | SINE,Alu |
| chr2 | 1636957 | A | T | 0.00589 | PXDN | - | FALSE | ||
| chr1 | 205056844 | T | A | 0.00225 | RBBP5 | - | FALSE | ||
| chr1 | 182809019 | G | A | 0.00274 | DHX9 | + | FALSE | ||
| chr5 | 68505909 | A | G | 0.00178 | CENPH | + | TRUE | AluSx3 | SINE,Alu |
| chr6 | 150045919 | T | C | 0.00206 | NUP43 | - | TRUE | AluSq | SINE,Alu |