Dataset Overview
RBP
DAZAP1
Knock-Method
shRNA
RBP Family
RRM_1
Biosample Name
HepG2
Tissue Type
Liver
Biosample Type
Cell line
# of Control
2
# of Treat
2
Species
Human
Data Source
ENCODE
Profile ID
ENCSR220TBR
Platform
HiSeq
Pubmed ID
32252787
DAZAP1 - Target Gene Network
up-regulated gene
down-regulated gene
Gene Type:
the most differential
the most up-regulated
the most down-regulated
# of Top Genes:
25
50
75
100
Differential Expression Genes responding to KD/KO of DAZAP1
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Gene
Mean Expr. of Control
Mean Expr. of KD/KO
logFC
PValue
FDR
A1BG
9.32
39.87
2.13507
1.28856E-128
2.30170E-126
A1CF
29.34
41.48
0.81454
4.34994E-34
7.56833E-33
A2M
2342.22
3489.95
0.56969
6.44604E-22
6.62760E-21
AACS
15.41
8.57
-0.86202
2.21266E-26
2.79915E-25
AADAC
0.71
1.87
1.67156
9.40705E-07
3.14515E-06
AAED1
6.05
3.86
-0.70819
1.04788E-08
4.31288E-08
AAGAB
9.04
14.07
0.58493
1.47454E-09
6.56510E-09
AAK1
2.94
5.32
0.88162
8.19179E-13
4.77985E-12
AAMDC
19.44
27.21
0.55323
5.54824E-05
0.00015
AARS
40.96
51.98
0.33340
3.99596E-07
1.39811E-06
Showing 1 to 10 of 8,613 entries
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Function Analysis of Target Genes of DAZAP1
Set Enrichment Analysis (GSEA)
Gene Ontology(GO) Enrichment
KEGG Pathway Enrichment
Differential Alternative Splicing
Exon Skipping
Mutually Exclusive Exons
Alternative 5’ splice site
Alternative 3’ splice site
Intron Retention
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABCC6
16249648_16249711_16248729_16248888_16251519_16251666
0.00028
-0.177
DataSet_01_195
View details
ABHD14A-ACY1
52020968_52021212_52020620_52020677_52021324_52021469
0.00472
-0.2
DataSet_01_195
View details
ABI1
27044583_27044670_27040526_27040712_27047990_27048167
0.00710
0.243
DataSet_01_195
View details
AC002055.4
51222407_51222449_51222184_51222292_51223600_51223721
0.00903
-0.202
DataSet_01_195
View details
ACADM
76252384_76252550_76251717_76251959_76253181_76253260
0.00187
-0.05
DataSet_01_195
View details
ADRM1
60883423_60883526_60883076_60883234_60883710_60883918
0.00210
0.037
DataSet_01_195
View details
AHSA2
61410681_61410754_61408472_61408540_61411846_61411935
0.00105
0.066
DataSet_01_195
View details
AHSG
186338374_186338579_186337645_186337729_186338883_186339107
0.00545
-0.5
DataSet_01_195
View details
AHSG
186338374_186338579_186336285_186336426_186338883_186339107
0.00730
-0.538
DataSet_01_195
View details
AKR1A1
46034156_46034356_46033818_46033849_46034598_46034678
0.00789
-0.083
DataSet_01_195
View details
Showing 1 to 10 of 253 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABI1
27044583_27044670_27047990_27048164_27040526_27040712
0.00676
-0.238
DataSet_01_195
View details
ACAD10
112165765_112165947_112171726_112171872_112159474_112159543
0.00005
-0.595
DataSet_01_195
View details
ACAD10
112159474_112159543_112165765_112165947_112153624_112153766
0.00190
0.395
DataSet_01_195
View details
ACLY
40052872_40052902_40054001_40054092_40049285_40049427
0.00056
-0.139
DataSet_01_195
View details
ACSS3
81532909_81533044_81536885_81537026_81528594_81528783
0.00000
-0.21
DataSet_01_195
View details
AGFG1
228395806_228395926_228398264_228398474_228389477_228389631
0.00168
-0.183
DataSet_01_195
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AHSG
186336285_186336426_186337645_186337729_186334975_186335139
0.00002
-0.009
DataSet_01_195
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AHSG
186334975_186335139_186336394_186336426_186334231_186334316
0.00003
0.018
DataSet_01_195
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AHSG
186336300_186336426_186337645_186337729_186334975_186335139
0.00032
-0.007
DataSet_01_195
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AHSG
186334975_186335139_186337645_186337729_186334231_186334316
0.00727
-0.052
DataSet_01_195
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Showing 1 to 10 of 170 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
A2M
9231839_9231927_9231891_9231927_9230296_9230453
0.00148
-0.5
DataSet_01_195
View details
AKR1A1
46032540_46032758_46032540_46032692_46033653_46033849
0.00069
0.074
DataSet_01_195
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AP1G2
24035024_24035369_24035272_24035369_24034814_24034910
0.00992
0.066
DataSet_01_195
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CAPN2
223949282_223949441_223949282_223949319_223949887_223949953
0.00489
-0.042
DataSet_01_195
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CDK18
205492274_205492432_205492274_205492425_205492610_205492843
0.00388
0.686
DataSet_01_195
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CEP164
117279605_117279744_117279605_117279720_117280333_117280681
0.00554
0.354
DataSet_01_195
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CPNE1
34220084_34220307_34220232_34220307_34219866_34219947
0.00124
0.069
DataSet_01_195
View details
DAZAP1
1422346_1422584_1422346_1422395_1425876_1425959
0.00680
0.503
DataSet_01_195
View details
GPX4
1105656_1106265_1105656_1105808_1106398_1106458
0.00900
-0.016
DataSet_01_195
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HMGN3
79911992_79912106_79912033_79912106_79910961_79911443
0.00386
-0.095
DataSet_01_195
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Showing 1 to 10 of 27 entries
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ACADVL
7127798_7127871_7127802_7127871_7127639_7127712
0.00095
-0.063
DataSet_01_195
View details
ACOT9
23724735_23724974_23724735_23724856_23725993_23726061
0.00992
-0.109
DataSet_01_195
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AHSG
186338374_186339107_186338883_186339107_186336285_186336426
0.00469
-0.091
DataSet_01_195
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ATP6V1G2-DDX39B
31508190_31508354_31508190_31508311_31509726_31509925
0.00010
0.209
DataSet_01_195
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FGL1
17752955_17753140_17752955_17753026_17753678_17753925
0.00029
0.299
DataSet_01_195
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FN1
216236631_216236800_216236631_216236738_216238044_216238134
0.00546
0.04
DataSet_01_195
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FUBP1
78414089_78414599_78414089_78414459_78414839_78414985
0.00001
-0.049
DataSet_01_195
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IKBKAP
111660950_111661169_111660950_111661029_111662101_111662175
0.00001
0.719
DataSet_01_195
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INTS3
153742207_153742320_153742244_153742320_153741368_153741437
0.00666
0.211
DataSet_01_195
View details
MRPS30
44812016_44812122_44812047_44812122_44811110_44811256
0.00524
-0.05
DataSet_01_195
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RBP
LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE
pValue
△Inc
Dataset ID
Sashimi plot
ABCD4
74763035_74764772_74763035_74763152_74764632_74764772
0.00006
-0.115
DataSet_01_195
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ACADVL
7127639_7127871_7127639_7127712_7127802_7127871
0.00729
-0.085
DataSet_01_195
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AHSA2
61412636_61413632_61412636_61412753_61413580_61413632
0.00432
0.121
DataSet_01_195
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ANO9
431693_431906_431693_431767_431847_431906
0.00282
-0.241
DataSet_01_195
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ATF4
39916568_39917676_39916568_39916756_39917358_39917676
0.00001
0.068
DataSet_01_195
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BAX
49464066_49465055_49464066_49464171_49464788_49465055
0.00397
-0.088
DataSet_01_195
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C11orf49
47182677_47183798_47182677_47182741_47182996_47183798
0.00679
0.059
DataSet_01_195
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CCT8
30434667_30434877_30434667_30434736_30434810_30434877
0.00291
0.058
DataSet_01_195
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CERS2
150939231_150939678_150939231_150939338_150939549_150939678
0.00305
0.021
DataSet_01_195
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CYP2W1
1027912_1029276_1027912_1028054_1028270_1029276
0.00150
-0.165
DataSet_01_195
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Differential Variants in RNA (DVRs)
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Chrom
Site
Ref_allele
Alt_allele
Pvalue
Genename
Strand
KnownRNAediting
RepeatName
RepeatFamily
chr1
145282799
G
A
0.00081
NBPF20,NOTCH2NL
+
FALSE
chr1
53291420
A
G
0.00795
ZYG11B
+
TRUE
AluJr
SINE,Alu
chr1
220231338
T
C
0.00762
RNU5F-1,BPNT1
+,-
FALSE
AluY
SINE,Alu
chr1
15909744
C
T
0.00225
AGMAT
-
FALSE
chr1
87328397
A
T
0.00252
SEP15
-
FALSE
chr1
154128835
G
T
0.00032
TPM3
-
FALSE
chr1
148003730
T
C
0.00636
NBPF8
-
TRUE
L1MC4
SINE,Alu
chr1
94995411
C
A
0.00849
F3
-
FALSE
AluSx
SINE,Alu
chr1
9328106
A
G
0.00394
H6PD
+
TRUE
AluJr
SINE,Alu
chr1
53289688
A
G
0.00069
ZYG11B
+
TRUE
AluSz
SINE,Alu
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Differential Expression Gene Analysis
Heatmap of Unsupervised Hierarchical Clustering
Scatter Diagram of Differential Expression