RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	245008386	G	C	0.00041		.	FALSE	MER2	SINE,Alu
chr1	10519787	A	T	0.00037		.	FALSE	(A)n	SINE,Alu
chr4	17802956	T	C	0.00351	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	27205214	T	C	0.00799		.	FALSE	AluSc	SINE,Alu
chr2	176791183	T	C	0.00252	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	28836973	A	G	0.00017	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	67874731	T	C	0.00145	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	120162635	A	T	0.00203	ZNF697	-	FALSE
chr1	74672474	G	A	0.00014	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr1	36392543	G	T	0.00971		.	FALSE	(T)n	SINE,Alu
chr1	6583701	T	C	0.00029	NOL9	-	FALSE
chr3	149683506	G	C	0.00147	PFN2	-	FALSE
chr6	109784327	T	C	2.38076E-05	MICAL1,ZBTB24	-	TRUE	AluSg	SINE,Alu
chr1	55316322	A	G	0.00266	DHCR24	-	FALSE
chr1	19543352	T	C	0.00715	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	85773494	T	C	0.00099	GGCX	-	TRUE	AluY	SINE,Alu
chr5	40832550	C	T	7.98859E-06	RPL37	-	FALSE
chr1	204525548	A	G	0.00501	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	6653508	G	A	0.00320	KLHL21	-	FALSE
chr6	158093827	C	T	0.00201	ZDHHC14	+	FALSE
chr1	9163442	T	C	0.00235		.	FALSE	AluSp	SINE,Alu
chr5	114951140	T	G	0.00761	TMED7-TICAM2,LOC101927100,TMED7	+,-	FALSE
chr17	7760704	A	G	0.00297	NAA38	-	FALSE
chr1	16892276	T	C	0.00236	NBPF1	-	FALSE
chr1	145509570	A	G	0.00043	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	200375848	C	T	0.00586	ZNF281	-	FALSE	(T)n	SINE,Alu
chr1	16200163	A	G	1.36684E-05	SPEN	+	FALSE
chr1	70833400	C	T	0.00224	HHLA3	+	FALSE	LTR7	SINE,Alu
chr8	12286573	G	A	0.00052	FAM86B2	-	FALSE
chr1	193055149	A	G	0.00340	TROVE2	+	FALSE
chr3	16357494	G	A	2.87472E-06	RFTN1	-	FALSE
chr1	120458004	A	T	0.00247	NOTCH2	-	FALSE
chr1	20975992	T	C	0.00027	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	145512944	A	G	0.00178	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	44818528	T	G	0.00486	ERI3	-	FALSE
chr1	87573963	T	C	0.00978	HS2ST1	+	FALSE
chr6	26095484	A	G	0.00231		.	FALSE	AluY	SINE,Alu
chr4	25749191	T	C	0.00301	SEL1L3	-	FALSE
chr7	44839297	A	T	0.00777	PPIA	+	FALSE
chr10	75009585	T	C	2.45347E-10	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr6	42855057	A	G	0.00034	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	153609268	G	A	0.00263	CHTOP	+	FALSE
chr1	118066459	A	G	0.00729	MAN1A2	+	FALSE
chr1	9162247	T	C	0.00549		.	FALSE	AluSx	SINE,Alu
chr1	33149443	A	G	0.00327	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr7	44917406	T	C	0.00021	PURB	-	TRUE	AluSz	SINE,Alu
chr1	179829595	T	C	0.00188	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr15	49454018	C	T	0.00053	GALK2	+	FALSE	AluSx1	SINE,Alu
chr6	29910604	C	A	0.00144		.	FALSE
chr1	117644949	C	G	0.00862	TTF2	+	FALSE
chr1	990984	G	A	0.00787	AGRN	+	FALSE
chr1	46075719	A	G	0.00461	NASP	+	TRUE	AluSx4	SINE,Alu
chr19	1457883	C	G	2.74690E-05	APC2	+	FALSE
chr5	43380781	T	C	0.00739	CCL28	-	TRUE	AluJb	SINE,Alu
chr1	95362514	G	T	0.00279	CNN3	-	FALSE
chr1	1337734	C	T	3.46713E-05	MRPL20	-	FALSE
chr1	179044174	A	G	0.00410	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	155032752	A	G	0.00347	LOC100505666,ADAM15	+,-	FALSE
chr19	13884096	A	G	1.54361E-06	MRI1	+	TRUE	AluSz	SINE,Alu
chrX	3526615	G	T	0.00820	PRKX	-	FALSE
chr2	196999051	C	G	0.00403	STK17B	-	FALSE	MER1B	SINE,Alu
chr1	197070776	C	T	0.00600	ASPM	-	FALSE
chr1	168214098	T	G	0.00134		.	FALSE
chr19	4428790	A	T	0.00000	CHAF1A	+	FALSE
chr1	100489619	A	G	0.00319	SLC35A3	+	TRUE
chr19	18306990	G	C	0.00090	MPV17L2	+	FALSE
chr1	10518052	T	C	0.00179		.	FALSE	AluJr	SINE,Alu
chr1	28825331	A	G	0.00563	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr7	32529936	G	C	0.00027	LSM5	-	FALSE
chr2	277314	G	A	0.00867	ACP1	+	FALSE
chr1	1344998	A	G	5.29904E-05		.	FALSE	AluSg	SINE,Alu
chr1	148003730	T	C	0.00415	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	204524950	A	G	4.72439E-07	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	86049392	C	A	0.00322	CYR61	+	FALSE
chr1	46075715	A	G	0.00401	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	156564754	A	G	0.00562	GPATCH4	-	FALSE
chr4	88814756	C	T	0.00145		.	FALSE
chr1	90496700	A	G	0.00486	ZNF326	+	FALSE
chr1	1686040	G	T	0.00543	NADK	-	FALSE
chr17	42877584	T	C	0.00489	GJC1	-	TRUE	AluSg	SINE,Alu
chr1	19586458	A	G	2.46370E-10	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	19542310	T	C	0.00582	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	144821888	C	G	0.00093	NBPF20,NBPF9	+	FALSE
chr3	156259299	T	C	0.00097	SSR3	-	TRUE	AluSq2	SINE,Alu
chr8	128752643	G	A	4.26326E-14	MYC	+	FALSE	GA-rich	SINE,Alu
chr1	32799510	T	G	0.00048	MARCKSL1	-	FALSE
chr1	89447720	G	A	0.00521	KYAT3,RBMXL1	-	FALSE
chr19	50410818	G	C	0.00722	IL4I1,NUP62	-	FALSE	AluSz	SINE,Alu
chr6	7610036	C	A	0.00545	SNRNP48	+	FALSE	L1ME1	SINE,Alu
chr3	136573440	A	G	0.00038	NCK1-AS1,SLC35G2	+,-	FALSE
chr7	75677504	C	T	0.00768	MDH2	+	FALSE
chr1	27248275	C	T	0.00047	NUDC	+	FALSE
chr12	9464178	G	A	0.00081	LOC642846	+	FALSE
chr14	50361164	C	T	0.00103	ARF6	+	FALSE	(T)n	SINE,Alu
chr1	45279898	C	T	0.00271		.	FALSE	(TCTT)n	SINE,Alu
chr2	32535568	A	G	0.00016		.	FALSE	MER8	SINE,Alu
chr1	40229368	A	G	0.00209	BMP8B,PPIE	+,-	FALSE
chr5	151041871	C	A	0.00165	SPARC	-	FALSE
chr19	9761591	T	C	0.00516	ZNF562	-	TRUE	AluSp	SINE,Alu
chr4	2940430	T	C	2.47251E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	28836900	A	G	0.00311	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr12	133334739	T	C	0.00388	ANKLE2	-	TRUE	AluSz	SINE,Alu
chr3	196670090	G	A	6.78352E-09	NCBP2-AS2	+	FALSE
chr16	48386442	A	G	0.00824	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chrX	77083846	T	C	0.00668	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	148932848	A	G	0.00496	LOC645166	+	FALSE
chr1	121134169	A	T	0.00660	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr7	17384393	A	G	1.74996E-06	AHR	+	TRUE	AluSx	SINE,Alu
chr9	19376252	A	T	0.00367		.	FALSE
chr7	64435683	T	A	0.00239	ZNF117	-	FALSE
chr5	53841238	G	T	0.00267	SNX18	+	FALSE
chr3	42826041	T	G	0.00019	HIGD1A	-	FALSE
chr2	185802243	C	A	0.00172	ZNF804A	+	FALSE
chr2	1636957	A	T	0.00589	PXDN	-	FALSE
chr1	24086794	G	T	0.00309	TCEB3	+	FALSE	(T)n	SINE,Alu
chr1	10517672	T	C	0.00070		.	FALSE	AluSx1	SINE,Alu
chr4	10076860	G	A	1.69987E-09	WDR1	-	FALSE
chr1	193054576	T	C	0.00068	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr1	100489571	G	A	1.40531E-05	SLC35A3	+	FALSE	AluSc	SINE,Alu
chr3	194998813	A	G	0.00572	ACAP2	-	FALSE	AluSx1	SINE,Alu
chr4	52753346	A	G	0.00782	DCUN1D4	+	TRUE	AluSc	SINE,Alu
chr1	205129319	G	A	0.00177	DSTYK	-	FALSE
chr12	133298121	A	G	0.00026	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	92862682	A	G	0.00381		.	FALSE	AluJr	SINE,Alu
chr2	201774185	T	C	0.00921		.	FALSE	AluSz	SINE,Alu
chr22	18571474	A	G	1.16198E-07	PEX26	+	TRUE	AluSz	SINE,Alu
chr4	77996969	T	G	0.00971	CCNI	-	FALSE
chr1	46077218	A	G	0.00783	NASP	+	TRUE	AluSc8	SINE,Alu
chr14	74524774	T	C	0.00481	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr1	6583066	T	C	0.00209	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	85020487	C	T	0.00120	SPATA1,CTBS	+,-	FALSE
chr12	69237077	A	G	0.00445	MDM2	+	TRUE	(GA)n	SINE,Alu
chr15	65442506	T	C	0.00088	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	19543364	T	C	0.00447	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	37328042	T	C	6.80414E-06		.	FALSE
chr1	11783009	A	G	7.55078E-05		.	FALSE	AluSx	SINE,Alu
chr1	16889596	T	C	0.00905	NBPF1	-	TRUE
chr4	189026673	A	G	0.00994	TRIML2	-	FALSE
chr1	36068364	T	C	9.25575E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr19	58361328	G	C	0.00972	ZNF587	+	FALSE
chr1	87213174	T	G	0.00081	SH3GLB1	+	FALSE
chr5	96503523	C	T	0.00072	RIOK2	-	FALSE
chr1	109181304	C	A	0.00592	FAM102B	+	FALSE
chr1	26799971	T	A	0.00713	HMGN2	+	FALSE
chr2	55516891	G	A	2.12747E-05	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	6282324	T	C	0.00013	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	108298260	C	T	0.00042	KIAA1524	-	FALSE
chr1	212587320	T	C	0.00023	TMEM206	-	FALSE
chr4	160280309	G	T	0.00770	RAPGEF2	+	FALSE	(T)n	SINE,Alu
chrX	77083645	T	C	4.59952E-07	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	1655474	G	A	0.00694	CDK11B,CDK11A	-	FALSE
chr1	90493918	G	A	0.00166	ZNF326	+	FALSE
chr4	139966801	A	G	0.00282	NOCT	+	TRUE	AluYj4	SINE,Alu
chr5	76728039	T	G	0.00092	WDR41	-	FALSE
chr2	47703548	G	A	5.05442E-05	MSH2	+	FALSE
chr1	206579936	A	G	0.00974	SRGAP2	+	FALSE
chr1	120164252	G	A	0.00139	ZNF697	-	FALSE
chr1	33148635	A	G	5.38540E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr2	38522138	G	T	0.00769	ATL2	-	FALSE
chr2	20450819	T	C	0.00807	PUM2	-	TRUE
chr1	120611964	G	C	0.00130	NOTCH2	-	FALSE
chr9	14764	C	T	0.00491	WASH1	-	FALSE
chr1	33071096	A	G	0.00139	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	9740895	A	T	0.00136	PIK3CD,PIK3CD-AS2	+,-	FALSE	MLT1F1	SINE,Alu
chr1	160967856	T	C	0.00491	F11R	-	TRUE	AluSp	SINE,Alu
chr3	32524229	G	T	0.00359	CMTM6	-	FALSE
chr1	145282799	G	A	0.00882	NBPF20,NOTCH2NL	+	FALSE
chr4	53463566	C	T	5.12751E-05	USP46	-	FALSE
chr12	133298355	A	G	0.00024	PGAM5	+	TRUE	AluSp	SINE,Alu
chr13	76378459	T	C	0.00239	LMO7	+	FALSE
chr1	45975574	A	G	0.00299	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr3	13670776	T	C	0.00336	FBLN2	+	FALSE
chr1	86049391	T	A	0.00019	CYR61	+	FALSE
chr1	225974614	A	G	0.00209	SRP9	+	TRUE	AluJr	SINE,Alu
chr1	120612163	C	A	0.00566	NOTCH2	-	FALSE
chr17	26955330	A	C	0.00291	KIAA0100	-	FALSE
chr2	242512159	A	G	0.00243	BOK	+	FALSE
chr1	9416151	G	A	0.00292	SPSB1	+	FALSE
chr3	40578831	A	G	0.00956	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	145116147	T	A	0.00031	NBPF20,SEC22B	+	FALSE
chr1	52838798	T	C	0.00069	ORC1	-	TRUE	AluJb	SINE,Alu
chr1	87328403	A	T	0.00235	SEP15	-	FALSE
chr1	36522615	A	G	0.00658		.	FALSE	AluSc	SINE,Alu
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr8	48890109	A	G	0.00750	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	27107948	G	A	0.00177	ARID1A	+	FALSE
chr1	144594107	C	G	0.00706	NBPF20	+	FALSE
chr1	16928126	G	C	0.00958	NBPF1	-	FALSE	MLT1E3	SINE,Alu
chr1	237063504	A	G	0.00900	MTR	+	FALSE	L1ME3F	SINE,Alu
chr7	99636950	A	G	0.00927	ZKSCAN1	+	FALSE	AluSx1	SINE,Alu
chr10	116603648	A	G	0.00267	FAM160B1	+	FALSE
chr1	15909744	C	T	0.00225	AGMAT	-	FALSE
chr9	137330713	T	G	0.00021	RXRA	+	FALSE
chr2	85837797	T	C	0.00097	USP39,C2orf68	+,-	FALSE	AluSx	SINE,Alu
chr14	24661020	C	T	0.00504	TM9SF1	-	FALSE	AluJb	SINE,Alu
chr1	151554503	T	C	0.00619	TUFT1	+	FALSE
chr3	32496328	C	A	0.00013	CMTM7	+	FALSE
chr6	13790931	T	C	0.00122	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr1	184762524	T	C	0.00471	FAM129A	-	TRUE	AluSz	SINE,Alu
chr19	24103951	A	G	0.00082	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr3	52873072	A	C	0.00233	TMEM110-MUSTN1,TMEM110	-	FALSE
chr2	128063526	C	A	0.00759	MAP3K2	-	FALSE
chr1	160967855	T	C	0.00042	F11R	-	TRUE	AluSp	SINE,Alu
chr1	11783106	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr1	90401416	T	C	6.95799E-05	LRRC8D	+	FALSE
chr1	46075661	A	G	0.00071	NASP	+	TRUE	AluSx4	SINE,Alu
chrX	3526616	G	A	0.00971	PRKX	-	FALSE
chr6	42857111	A	G	0.00681	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr1	26143725	A	T	0.00988	SEPN1	+	FALSE	AluSx	SINE,Alu
chr2	101622881	C	A	1.48865E-05	RPL31	+	FALSE
chr1	33149399	A	G	0.00148	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	64687665	C	A	0.00976	LGALSL	+	FALSE
chr1	2326812	A	G	0.00709	RER1	+	FALSE
chr3	113528895	A	T	0.00191	ATP6V1A	+	FALSE	AluSp	SINE,Alu
chr3	133538762	A	T	0.00804	SRPRB	+	FALSE
chr1	33149443	A	G	0.00013	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	65496187	G	A	0.00103	ACTR2	+	FALSE
chr1	28661657	A	G	0.00910	MED18	+	TRUE	AluSg	SINE,Alu
chr1	20977856	T	C	0.00232	PINK1,PINK1-AS	+,-	FALSE
chr1	158067061	G	T	0.00093	KIRREL	+	FALSE
chr1	28823671	T	C	0.00073	PHACTR4	+	FALSE
chr1	10519946	T	C	0.00080		.	FALSE	AluJr	SINE,Alu
chr1	201846634	C	A	0.00852	IPO9	+	FALSE	(CA)n	SINE,Alu
chr2	37328008	T	C	0.00733		.	FALSE
chr19	3467751	C	A	0.00182	NFIC	+	FALSE	(TA)n	SINE,Alu
chr2	65496075	C	T	0.00972	ACTR2	+	FALSE
chr1	44401225	T	C	0.00802	ARTN	+	FALSE
chr2	37329300	T	C	0.00050		.	FALSE	AluJr4	SINE,Alu
chr16	58054472	T	C	0.00530	USB1	+	FALSE
chr1	177977067	A	G	0.00030	LOC730102	-	FALSE
chr2	99992822	A	C	0.00266	EIF5B	+	FALSE
chr1	53290298	A	G	0.00258	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr1	36067811	T	C	0.00439	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	55207982	C	A	0.00063	MROH7-TTC4,TTC4	+	FALSE
chr1	10520439	T	C	0.00293		.	FALSE	AluSx1	SINE,Alu
chr1	114940216	T	G	0.00148	TRIM33	-	FALSE	(T)n	SINE,Alu
chr4	79447807	G	C	0.00339	FRAS1	+	FALSE
chr1	145512937	A	G	1.47906E-06	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	7036682	A	T	0.00335	RSAD2	+	FALSE
chr1	117078729	A	G	0.00983	CD58	-	FALSE
chr1	179843781	T	C	0.00888	TOR1AIP2	-	TRUE	AluJb	SINE,Alu
chr1	9162224	T	C	0.00523		.	FALSE	AluSx	SINE,Alu
chr19	11560483	A	G	0.00775	PRKCSH	+	TRUE	AluSx	SINE,Alu
chr6	158613395	C	A	0.00031	GTF2H5	+	FALSE
chr1	16891379	C	T	0.00074	NBPF1	-	FALSE
chr1	182353198	A	T	0.00473	GLUL	-	FALSE
chr1	27205634	T	C	0.00025		.	FALSE	FLAM_A	SINE,Alu
chr1	1653046	T	A	0.00217	CDK11B,CDK11A	-	FALSE
chr1	204526554	A	G	0.00194	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	25169634	A	G	0.00531	CLIC4	+	FALSE
chr1	10520378	T	C	0.00895		.	FALSE	AluSx1	SINE,Alu
chr1	149816373	G	A	0.00364		.	FALSE	(A)n	SINE,Alu
chr12	124105948	C	T	0.00778	EIF2B1	-	FALSE
chr2	85132775	C	G	7.25564E-06	TMSB10	+	FALSE
chr1	33139061	T	C	0.00079	RBBP4	+	FALSE	AluSx3	SINE,Alu
chr12	56532056	G	C	0.00743	ESYT1	+	FALSE
chr2	11966317	T	C	0.00011	LPIN1	+	FALSE
chr2	135208354	A	T	0.00249	MGAT5	+	FALSE
chr1	46828700	A	G	0.00273	NSUN4	+	FALSE
chr4	5743512	T	C	0.00045	EVC	+	FALSE
chr1	109475569	A	G	0.00046	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr3	100083460	G	A	0.00041	TOMM70	-	FALSE	FAM	SINE,Alu
chr1	10520684	T	C	0.00125	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	138156	G	T	0.00177	LOC729737	-	FALSE
chr1	120611964	G	C	0.00211	NOTCH2	-	FALSE
chr12	133297961	A	G	1.06136E-06	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	19953131	G	A	0.00486	MINOS1,MINOS1-NBL1	+	FALSE
chr10	865825	C	T	0.00088	LARP4B	-	FALSE
chr1	16939857	C	T	0.00542	NBPF1	-	FALSE
chr3	44790781	T	C	0.00074	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	169811639	G	C	0.00134	C1orf112	+	FALSE
chr5	40832557	G	T	0.00024	RPL37	-	FALSE
chr2	86979093	G	A	0.00591	RMND5A	+	FALSE
chr17	61502463	T	G	0.00370	TANC2	+	FALSE
chr1	12082926	A	G	0.00229	MIIP	+	FALSE
chr1	10517313	T	C	0.00742		.	FALSE	AluJr	SINE,Alu
chr1	326539	A	G	0.00450		.	FALSE
chr4	165998149	T	C	0.00057	TMEM192	-	TRUE	AluSx	SINE,Alu
chr1	150446056	G	A	0.00945	RPRD2	+	FALSE	(A)n	SINE,Alu
chr1	112266787	G	T	0.00642	FAM212B	-	FALSE
chr1	1650787	T	C	0.00426	CDK11B,CDK11A	-	FALSE
chr1	156219450	A	G	0.00753	SMG5	-	FALSE
chr8	33356827	T	A	0.00122	MAK16,TTI2	+,-	FALSE
chr1	214529740	T	C	0.00375	PTPN14	-	TRUE
chr3	45722381	A	G	0.00996	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr19	42375624	A	G	0.00049		.	FALSE	AluSx	SINE,Alu
chr1	207943385	A	G	0.00751	CD46	+	TRUE	AluSx1	SINE,Alu
chr5	40832553	A	T	9.00390E-07	RPL37	-	FALSE
chr5	115166486	T	C	0.00122	ATG12	-	TRUE	AluJr	SINE,Alu
chrX	135300016	T	C	0.00358	MAP7D3	-	TRUE	AluSz	SINE,Alu
chr2	242122440	C	A	0.00354	PPP1R7	+	FALSE
chr3	52109841	T	C	7.35943E-05	POC1A	-	FALSE
chr1	144595886	G	A	0.00242	NBPF20	+	FALSE	AluJb	SINE,Alu
chr2	85772406	G	A	0.00278	GGCX	-	FALSE
chr1	180859304	T	C	2.77658E-06	XPR1	+	FALSE
chr2	20818517	T	C	0.00748	HS1BP3	-	FALSE
chr1	6730782	C	T	0.00807	DNAJC11	-	FALSE
chr2	207943789	G	T	0.00118	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr1	206579936	A	G	0.00747	SRGAP2	+	FALSE
chr1	33149266	A	G	0.00292	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr16	10623531	T	C	1.32618E-09	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	19586458	A	G	0.00029	MRTO4	+	TRUE	AluSz	SINE,Alu
chr17	73886212	T	C	0.00724	TRIM65	-	TRUE	FRAM	SINE,Alu
chr1	110049203	G	C	0.00209		.	FALSE
chr9	115936771	C	T	1.86133E-10	FKBP15	-	FALSE
chr1	16912138	A	G	0.00197	NBPF1	-	FALSE
chr1	120612194	C	G	0.00091	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr1	10519947	T	C	0.00534		.	FALSE	AluJr	SINE,Alu
chr6	143661166	A	C	0.00536	AIG1	+	FALSE
chr1	154179193	A	T	0.00122	C1orf43	-	FALSE
chr1	26144434	G	T	0.00945	SEPN1	+	FALSE
chr1	6283348	T	C	0.00247	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	241796949	G	A	0.00053	OPN3,CHML	-	FALSE
chr1	33149399	A	G	0.00308	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr4	17802783	T	C	0.00509	DCAF16	-	TRUE	AluSz	SINE,Alu
chr17	43002237	C	A	0.00141	KIF18B	-	FALSE
chr3	101542436	A	G	0.00023	NXPE3	+	TRUE	AluJr	SINE,Alu
chr2	37328034	T	C	6.77479E-07		.	FALSE
chr2	229890660	A	G	0.00596	PID1	-	FALSE
chr1	156495520	T	A	0.00048	IQGAP3	-	FALSE
chr8	37613106	T	C	0.00626	ERLIN2	+	FALSE
chr1	155214017	C	A	0.00946	GBA	-	FALSE	AluSx3	SINE,Alu
chr4	434456	C	T	0.00553	ABCA11P,ZNF721	-	FALSE	AluSp	SINE,Alu
chr1	179044181	A	G	0.00660	FAM20B	+	TRUE	AluSx	SINE,Alu
chr4	68587786	G	T	0.00658	UBA6-AS1	+	FALSE	MER41B	SINE,Alu
chr5	17276080	A	C	0.00298	BASP1	+	FALSE	(TC)n	SINE,Alu
chr2	217366803	A	G	0.00914		.	FALSE	AluSz6	SINE,Alu
chr8	117784431	T	A	0.00422	UTP23	+	FALSE	AluSz6	SINE,Alu
chr1	20826781	C	T	0.00110	MUL1	-	FALSE
chr15	41593308	A	G	0.00619		.	FALSE	AluSz6	SINE,Alu
chr1	145512073	A	G	0.00131	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	32681795	C	T	0.00791	DCDC2B,TMEM234	+,-	FALSE
chr17	49041732	T	C	0.00135	SPAG9	-	TRUE	AluSx	SINE,Alu
chr2	172178680	T	C	9.91686E-05	METTL8	-	TRUE	AluSx3	SINE,Alu
chr2	216908679	C	T	0.00988	PECR	-	FALSE
chr1	145281633	C	A	0.00510	NBPF20,NOTCH2NL	+	FALSE
chr1	1595602	A	G	9.14189E-05	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr1	155161702	G	C	0.00020	MUC1	-	FALSE
chr1	19543459	T	C	0.00540	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	179989742	G	C	9.63603E-05	CEP350	+	FALSE
chr1	10519936	T	C	0.00354		.	FALSE	AluJr	SINE,Alu
chr6	24720534	T	C	0.00053		.	FALSE
chr12	27574182	G	C	0.00014	ARNTL2,ARNTL2-AS1	+,-	FALSE
chr1	10520178	T	C	2.78615E-06		.	FALSE	AluSx	SINE,Alu
chr5	140798639	G	C	3.89156E-05	PCDHGA1,PCDHGA2,PCDHGA3,PCDHGB1,PCDHGA4,PCDHGB2,PCDHGA5,PCDHGB3,PCDHGA6,PCDHGA7,PCDHGB4,PCDHGA8,PCDHGB5,PCDHGA9,PCDHGB6,PCDHGA10,PCDHGB7	+	FALSE
chr7	65618876	A	G	0.00817	CRCP	+	TRUE	AluSx3	SINE,Alu
chr1	214524576	T	C	0.00442	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	117529752	C	A	0.00024	PTGFRN	+	FALSE
chr1	28858860	C	T	0.00213	RCC1	+	FALSE
chr1	94995653	A	C	0.00035	F3	-	FALSE	AluSx	SINE,Alu
chr22	22050366	T	C	0.00449	PPIL2	+	FALSE	MER5A	SINE,Alu
chr1	86049362	C	A	0.00140	CYR61	+	FALSE
chr3	30735330	G	T	0.00401	TGFBR2	+	FALSE
chr10	15119789	T	C	0.00366	ACBD7	-	TRUE	AluSx1	SINE,Alu
chr1	111991845	C	A	0.00803	WDR77,ATP5F1	+,-	FALSE
chr1	145512073	A	G	0.00505	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr5	134061340	T	A	0.00493	SEC24A	+	FALSE
chr1	180854783	T	C	0.00292	XPR1	+	FALSE
chr1	10520450	T	C	0.00070		.	FALSE	AluSx1	SINE,Alu
chr1	9163402	T	C	4.95479E-05		.	FALSE	AluSp	SINE,Alu
chr3	119545349	T	C	0.00805	GSK3B	-	FALSE
chr2	61416403	T	G	0.00350	USP34	-	FALSE	AluSc8	SINE,Alu
chr1	38280010	C	T	0.00393	MTF1	-	FALSE
chr6	7250960	G	A	0.00889	RREB1	+	FALSE
chr1	171486912	G	A	0.00866	PRRC2C	+	FALSE
chr1	150048520	C	T	0.00089	VPS45	+	FALSE
chr2	37328012	T	C	6.47624E-05		.	FALSE
chr1	27992800	C	A	5.71645E-05	IFI6	-	FALSE	FAM	SINE,Alu
chr1	6259433	G	A	0.00522	RPL22	-	FALSE	G-rich	SINE,Alu
chr4	170037423	G	T	0.00802	SH3RF1	-	FALSE
chr2	24225006	A	G	0.00078		.	FALSE	AluSx	SINE,Alu
chr1	167389822	C	T	0.00935	POU2F1	+	FALSE
chr1	52253793	C	T	0.00966	OSBPL9	+	FALSE
chr1	145694181	A	G	0.00052	NBPF20,NBPF10	+	TRUE	AluSz	SINE,Alu
chr1	16910172	G	A	0.00085	NBPF1	-	FALSE
chr1	26755643	A	G	0.00068	LIN28A	+	FALSE	AluSc	SINE,Alu
chr1	168220535	A	G	0.00665		.	FALSE	AluSz6	SINE,Alu
chr3	73025345	A	G	0.00219		.	FALSE	AluSz	SINE,Alu
chr1	15909850	C	G	0.00660	AGMAT	-	FALSE
chr1	201846632	C	T	7.46598E-05	IPO9	+	FALSE	(CA)n	SINE,Alu
chr6	7310259	A	G	0.00092	SSR1	-	FALSE
chr2	37327676	T	C	0.00462		.	FALSE

RBP	PTBP1
Knock-Method	shRNA
RBP Family	RRM_5
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR064DXG
Platform	HiSeq
Pubmed ID	32252787

PTBP1 - Target Gene Network