RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr6	160101723	T	C	0.00234	SOD2	-	TRUE	AluSz	SINE,Alu
chr2	131131424	G	C	0.00845	PTPN18	+	FALSE
chr1	14143003	A	G	0.00028	PRDM2	+	FALSE
chr12	69237053	A	G	0.00331	MDM2	+	TRUE
chr10	61548859	A	C	0.00011	CCDC6	-	FALSE
chr1	15904318	C	T	0.00109	AGMAT	-	FALSE
chr4	177252326	A	G	0.00554	SPCS3	+	TRUE
chr1	28566404	T	G	0.00963		.	FALSE	AluSx1	SINE,Alu
chr1	206566948	G	A	0.00568	SRGAP2	+	FALSE
chr1	19198414	G	A	0.00028	ALDH4A1	-	FALSE
chr1	100658578	G	A	0.00012	DBT	-	FALSE
chr3	101284940	T	C	1.85568E-05	TRMT10C	+	FALSE
chr1	118066459	A	G	1.18472E-05	MAN1A2	+	FALSE
chr14	31916944	T	C	1.05468E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	33240842	C	T	0.00446	YARS	-	FALSE
chr1	155695960	A	G	1.11424E-05	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	78414334	C	A	0.00702	FUBP1	-	FALSE	A-rich	SINE,Alu
chr1	144931330	C	T	0.00295	NBPF20,PDE4DIP	+,-	FALSE
chr1	145688668	A	T	0.00987	NBPF20,NBPF10,RNF115	+	FALSE
chr15	84873635	C	T	0.00059	LOC440300,GOLGA2P7	+,-	FALSE
chr1	114940209	G	T	0.00177	TRIM33	-	FALSE	(T)n	SINE,Alu
chr21	33974094	C	T	0.00880	C21orf59	-	FALSE
chr2	206987629	T	C	0.00491		.	FALSE	AluJb	SINE,Alu
chr2	103332887	T	A	0.00515	MFSD9	-	FALSE	L2d2	SINE,Alu
chr1	179811337	C	A	0.00670	TOR1AIP2	-	FALSE	AluSp	SINE,Alu
chr3	99517466	G	A	0.00088	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr2	170497653	T	G	0.00587		.	FALSE
chr1	109239334	A	T	0.00035	PRPF38B	+	FALSE
chr1	179042719	A	G	5.24590E-05	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	100547854	T	G	0.00080	MFSD14A	+	FALSE
chr1	35646125	C	T	0.00027	SFPQ	-	FALSE
chr6	3022544	T	C	0.00440	HTATSF1P2	-	TRUE	AluJr	SINE,Alu
chr5	40852810	G	T	0.00276	CARD6	+	FALSE
chr8	40011786	C	A	0.00196	C8orf4	+	FALSE
chr1	900725	T	G	0.00110	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr1	16889413	T	C	0.00016	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr9	115447527	T	C	0.00200	INIP	-	TRUE	AluJb	SINE,Alu
chr1	181058313	G	A	0.00651	IER5	+	FALSE
chr2	37329261	T	C	0.00123		.	FALSE	AluJr4	SINE,Alu
chr1	16952481	A	G	5.15865E-05	CROCCP2	-	FALSE
chr3	44869002	G	T	0.00012	KIF15	+	FALSE
chr1	16901668	T	C	0.00421	NBPF1	-	FALSE
chr7	99636947	A	G	0.00851	ZKSCAN1	+	FALSE	AluSx1	SINE,Alu
chr1	117648269	G	A	0.00988		.	FALSE	AluSz6	SINE,Alu
chr3	9829171	G	A	0.00730	TADA3	-	FALSE
chr6	31947917	C	T	0.00670		.	FALSE
chr9	37503313	A	G	0.00584	POLR1E	+	TRUE	AluJb	SINE,Alu
chr1	26801731	G	T	0.00146	HMGN2	+	FALSE	(T)n	SINE,Alu
chr1	31344952	C	T	0.00842	SDC3	-	FALSE
chr1	53289686	A	G	0.00222	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr7	44841237	T	A	0.00599	PPIA	+	FALSE
chr3	99463810	G	T	0.00496	MIR548G,COL8A1	+,-	FALSE
chr2	231032372	A	G	0.00691		.	FALSE	MLT1H	SINE,Alu
chr9	96438974	C	G	0.00303	PHF2	+	FALSE	(CTCCAC)n	SINE,Alu
chr6	38140503	C	T	0.00065	BTBD9	-	FALSE
chr3	49396588	T	C	0.00533	RHOA	-	FALSE
chr7	100271437	C	A	0.00026	GNB2	+	FALSE
chr3	45721905	A	G	0.00238	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	52253845	T	C	0.00889	OSBPL9	+	FALSE	(AT)n	SINE,Alu
chr5	149829071	T	C	0.00407	RPS14	-	FALSE
chr19	39433138	G	A	0.00276	FBXO17	-	FALSE	AluJb	SINE,Alu
chr2	238678004	A	G	0.00631	LRRFIP1	+	FALSE
chr1	120694990	C	A	0.00325		.	FALSE	A-rich	SINE,Alu
chr19	11945688	A	G	0.00083	ZNF440	+	TRUE	AluSp	SINE,Alu
chr3	10193732	A	G	0.00472	VHL	+	TRUE	AluJr	SINE,Alu
chr4	17629937	G	A	0.00795		.	FALSE	MER90	SINE,Alu
chr2	174090631	A	C	0.00038	ZAK,MLK7-AS1	+,-	FALSE
chr1	28087457	G	T	0.00178	FAM76A	+	FALSE	(T)n	SINE,Alu
chr1	203766872	G	A	1.42518E-06	ZC3H11A,ZBED6	+	FALSE
chr1	16889864	C	A	0.00020	NBPF1	-	FALSE
chr1	172411496	A	G	0.00361	C1orf105,PIGC	+,-	FALSE
chr1	40229368	A	G	0.00209	BMP8B,PPIE	+,-	FALSE
chr2	37328082	T	C	1.18454E-08		.	FALSE
chr6	13788294	T	C	0.00017	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	19586519	A	G	0.00239	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	120612194	C	G	0.00091	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr1	36068364	T	C	9.25575E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	148951398	C	T	0.00068	LOC645166	+	FALSE
chr1	28826118	A	G	0.00948	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	148556726	G	T	0.00758		.	FALSE
chr19	42375584	A	G	0.00021		.	FALSE	AluSx	SINE,Alu
chr3	44790781	T	C	0.00074	KIAA1143	-	TRUE	AluY	SINE,Alu
chr2	99812289	A	G	0.00040	MRPL30	+	TRUE	AluSx	SINE,Alu
chr17	46025078	A	G	0.00021	PNPO	+	TRUE	AluSc	SINE,Alu
chr1	44072066	C	T	0.00846	PTPRF	+	FALSE
chr1	112266787	G	T	0.00873	FAM212B	-	FALSE
chr1	24989266	A	T	0.00392	SRRM1	+	FALSE
chr1	144852203	T	G	0.00029	NBPF20,PDE4DIP	+,-	FALSE
chr1	184761350	T	C	0.00754	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	6283306	T	C	0.00558	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	109049163	A	G	0.00440	DPPA4	-	FALSE	AluSp	SINE,Alu
chr1	6282237	T	C	0.00771	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	9821914	C	T	7.78954E-06	TADA3	-	FALSE
chr12	25360465	G	A	0.00074	KRAS	-	FALSE
chr4	39552175	T	C	0.00010	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr2	32582399	T	G	0.00147	BIRC6	+	FALSE	(GGC)n	SINE,Alu
chr1	155429590	G	T	0.00356	ASH1L	-	FALSE
chr4	17803545	T	C	0.00710	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	46830110	A	G	0.00283	NSUN4	+	TRUE	AluSx1	SINE,Alu
chr3	66430378	T	A	0.00326	LRIG1	-	FALSE
chr3	196660052	G	A	0.00200	SENP5	+	FALSE	AluSz	SINE,Alu
chr1	33149443	A	G	0.00897	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr6	1395043	T	C	0.00055	FOXF2	+	FALSE
chr1	9161245	T	C	0.00429		.	FALSE	AluSx	SINE,Alu
chr1	16889639	T	C	0.00524	NBPF1	-	TRUE
chr1	21810903	A	G	0.00154	NBPF3	+	FALSE	L1MC4	SINE,Alu
chr3	39453610	C	T	0.00025	RPSA	+	FALSE
chr1	19585554	A	G	2.15626E-06	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr14	23795219	C	T	0.00201	BCL2L2-PABPN1,PABPN1	+	FALSE
chr8	25272446	A	T	0.00405	DOCK5	+	FALSE
chr3	30735330	G	T	0.00401	TGFBR2	+	FALSE
chr1	144606996	G	C	0.00107	NBPF20	+	FALSE
chr1	54691922	T	A	0.00219	SSBP3	-	FALSE
chr2	106510202	C	T	0.00854	NCK2	+	FALSE
chr3	181430146	C	A	0.00256	SOX2-OT,SOX2	+	FALSE
chr1	46117185	C	T	0.00714	GPBP1L1	-	FALSE
chr1	16945027	T	C	0.00483	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr1	204189357	C	T	0.00835	PLEKHA6	-	FALSE
chr1	6583066	T	C	0.00173	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	51873951	G	A	0.00591	EPS15	-	FALSE
chr1	24995941	A	G	0.00382	SRRM1	+	FALSE
chr1	11783041	A	G	0.00036		.	FALSE	AluSx	SINE,Alu
chr7	6694922	G	C	0.00996	ZNF316	+	FALSE
chr1	1252443	T	C	8.33820E-06	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr5	130537710	A	G	0.00899	LYRM7	+	TRUE	AluJb	SINE,Alu
chr1	179326418	A	G	0.00626	SOAT1	+	TRUE	AluSg	SINE,Alu
chr1	168218522	A	G	9.71811E-05		.	FALSE	AluSz	SINE,Alu
chr2	202029999	T	G	0.00350	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chr12	7045885	A	C	0.00473	ATN1	+	FALSE	(CAG)n	SINE,Alu
chr10	1086804	T	A	0.00821	IDI2-AS1,IDI1	+,-	FALSE
chr15	43698008	C	T	0.00175	TUBGCP4	+	FALSE	AluSp	SINE,Alu
chr1	120166681	G	A	0.00879	ZNF697	-	FALSE
chr2	208619320	A	G	0.00339	CCNYL1	+	FALSE	EutTc1-N1	SINE,Alu
chr1	19199221	C	T	0.00676	ALDH4A1	-	FALSE
chr1	67874252	C	A	0.00558	SERBP1	-	FALSE
chr8	25222165	A	G	0.00019	DOCK5	+	FALSE
chr1	218617543	G	A	0.00291	TGFB2	+	FALSE
chr11	20101744	C	A	0.00540	NAV2	+	FALSE
chr20	29631627	T	C	0.00040	FRG1BP	+	FALSE
chr1	161930908	G	A	0.00664	ATF6	+	FALSE
chr4	2940085	T	C	0.00801	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr19	19791276	A	G	0.00069	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr6	74134673	T	C	0.00340		.	FALSE	AluSz	SINE,Alu
chr7	44917405	C	T	0.00024	PURB	-	FALSE	AluSz	SINE,Alu
chr1	16889985	T	C	0.00583	NBPF1	-	FALSE
chr6	36894339	G	A	0.00650	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr1	46075191	C	A	0.00056	NASP	+	FALSE	A-rich	SINE,Alu
chr5	34906547	T	C	0.00051	RAD1	-	TRUE	AluJo	SINE,Alu
chr17	65335454	T	C	9.75664E-07	PSMD12	-	TRUE	AluSx	SINE,Alu
chr15	41590287	A	G	0.00568	OIP5-AS1	+	FALSE
chr1	54231849	C	T	0.00812	NDC1	-	FALSE
chr6	114181223	A	G	0.00365	MARCKS	+	FALSE
chr3	5257975	A	T	9.78592E-05	EDEM1	+	FALSE
chr5	125961079	A	G	0.00258	PHAX	+	TRUE	AluSz	SINE,Alu
chr19	30192475	G	A	0.00575	C19orf12	-	FALSE	MER2	SINE,Alu
chr1	145281408	C	T	0.00087	NBPF20,NOTCH2NL	+	FALSE
chr1	65299558	C	T	0.00162	JAK1	-	FALSE
chr1	145323668	G	C	0.00241	NBPF20,NBPF10	+	FALSE
chr3	5257971	C	T	7.48062E-05	EDEM1	+	FALSE
chr12	33021934	A	G	0.00035	PKP2	-	FALSE
chr4	10443061	G	T	0.00057	ZNF518B	-	FALSE
chr1	168218574	A	G	0.00898		.	FALSE	AluSz	SINE,Alu
chr7	12250939	G	A	0.00537	TMEM106B	+	FALSE
chr1	52817434	T	C	0.00219	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	6283296	T	C	0.00225	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	49051841	C	A	0.00132	WDR6	+	FALSE
chr1	204524400	A	G	0.00029	MDM4	+	TRUE	AluY	SINE,Alu
chr6	74134804	T	C	0.00386		.	FALSE	AluSz	SINE,Alu
chr1	94352553	C	T	0.00136	GCLM	-	FALSE	AluSx1	SINE,Alu
chr12	133298254	A	G	1.64181E-10	PGAM5	+	TRUE	AluSp	SINE,Alu
chr3	15114288	T	C	7.51597E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr1	20976078	T	C	0.00344	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	20978324	T	G	0.00153	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr1	9416568	C	T	0.00061	SPSB1	+	FALSE
chr12	69237509	A	G	1.55617E-05	MDM2	+	TRUE
chr1	154128839	G	T	0.00534	TPM3	-	FALSE
chr4	145031951	T	A	0.00377	GYPA	-	FALSE	(TG)n	SINE,Alu
chr1	144874760	T	C	0.00267	NBPF20,PDE4DIP	+,-	FALSE
chr1	111682307	G	C	0.00637	DRAM2,CEPT1	+,-	FALSE
chr1	93617404	T	G	0.00265	TMED5	-	FALSE
chr1	45474230	G	A	0.00012	HECTD3	-	FALSE
chr17	28513176	G	A	0.00996	NSRP1	+	FALSE	AluJr	SINE,Alu
chr1	1677253	T	C	0.00145	SLC35E2	-	FALSE
chr1	54691921	G	A	0.00010	SSBP3	-	FALSE
chr17	57279264	A	G	0.00793	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	148556087	G	C	0.00486		.	FALSE
chr6	57034841	G	T	0.00581	ZNF451,LOC101927211	+,-	FALSE
chr4	56294628	T	C	0.00234	CLOCK	-	FALSE
chr1	44035352	C	T	0.00170	PTPRF	+	FALSE
chr3	196079305	T	C	0.00161		.	FALSE	AluSx	SINE,Alu
chr1	44818525	T	C	0.00442	ERI3	-	FALSE
chr10	15120279	T	C	0.00255	ACBD7	-	TRUE	L1PA7	SINE,Alu
chr2	234203547	T	C	0.00476	ATG16L1	+	FALSE
chr1	6279950	A	G	0.00541	RNF207	+	TRUE	AluSp	SINE,Alu
chr1	172580637	T	C	1.47330E-06	SUCO	+	FALSE
chr1	46032974	T	C	0.00141	AKR1A1	+	FALSE
chr1	197477932	C	T	0.00488	DENND1B	-	FALSE
chr1	146628742	T	G	0.00102	PRKAB2	-	FALSE
chr2	206986233	T	C	0.00109		.	FALSE	AluSz	SINE,Alu
chr2	99812414	A	G	9.82924E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	46075724	A	G	0.00990	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	204521631	A	G	0.00024	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	149818508	T	C	7.96693E-05		.	FALSE	MLT1D	SINE,Alu
chr20	279774	A	C	0.00056	ZCCHC3	+	FALSE	L2b	SINE,Alu
chr11	28134974	C	A	0.00479	METTL15	+	FALSE
chr3	197400501	C	G	0.00011	RUBCN	-	FALSE
chr5	40832557	G	T	0.00024	RPL37	-	FALSE
chr17	17971644	G	T	0.00154	GID4	+	FALSE
chr1	12024235	C	T	0.00395	PLOD1	+	FALSE
chr5	43700242	A	G	0.00932	NNT	+	FALSE
chr1	46126142	G	C	0.00171	GPBP1L1	-	FALSE
chr1	28661576	A	G	0.00625	MED18	+	TRUE	AluSg	SINE,Alu
chr1	24296856	T	G	0.00564		.	FALSE	AluSg	SINE,Alu
chr1	1595006	T	C	0.00156	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr12	98942643	A	G	3.59360E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr2	240954005	C	A	0.00021	NDUFA10	-	FALSE
chr1	156044213	G	T	7.72130E-05	MEX3A	-	FALSE	(T)n	SINE,Alu
chr1	87213174	T	G	0.00081	SH3GLB1	+	FALSE
chr6	44417182	A	G	0.00018	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr13	24823699	G	A	0.00472	SPATA13	+	FALSE
chr17	56049829	T	C	5.66836E-08	VEZF1	-	TRUE
chr19	11256697	T	C	0.00039	SPC24	-	TRUE	AluJr4	SINE,Alu
chr6	90344222	T	C	0.00451	LYRM2	-	TRUE	AluJo	SINE,Alu
chr3	40578941	A	G	0.00293	ZNF621	+	TRUE	AluJr	SINE,Alu
chr3	196670082	A	T	0.00261	NCBP2-AS2	+	FALSE
chr16	22297295	A	G	0.00749	EEF2K	+	TRUE	AluJr	SINE,Alu
chr3	113351702	A	G	0.00042		.	FALSE	7SLRNA	SINE,Alu
chr2	198416734	A	T	0.00257	HSPE1-MOB4,MOB4	+	FALSE
chr8	128944721	G	T	0.00074	PVT1	+	FALSE
chr1	65330637	C	T	0.00047	JAK1	-	FALSE
chr3	33877626	G	A	2.14228E-08	PDCD6IP	+	FALSE
chr1	9328120	A	G	4.35354E-06	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	11782984	A	G	0.00107		.	FALSE	AluSx	SINE,Alu
chr1	16889864	C	A	0.00094	NBPF1	-	FALSE
chr3	42253664	C	T	0.00065	TRAK1	+	FALSE
chr1	204521159	A	G	0.00158	MDM4	+	TRUE	AluSp	SINE,Alu
chr1	9160958	T	C	0.00108		.	FALSE	AluJb	SINE,Alu
chr7	2290522	C	T	0.00517	NUDT1	+	FALSE
chr1	6279957	A	G	0.00814	RNF207	+	TRUE	AluSp	SINE,Alu
chr1	43917637	G	A	0.00164	SZT2,HYI	+,-	FALSE
chr12	125511961	A	G	1.08093E-06	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	54571374	A	G	0.00280	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr3	33430397	C	T	0.00171	UBP1	-	FALSE
chr4	13583889	T	C	2.08207E-10	BOD1L1	-	FALSE
chr1	28826150	A	G	0.00152	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr10	101992298	T	C	0.00409	CWF19L1	-	TRUE	AluSq2	SINE,Alu
chr2	11966317	T	C	0.00011	LPIN1	+	FALSE
chr5	134670071	A	T	0.00405	C5orf66,H2AFY	+,-	FALSE
chr2	272203	C	T	0.00064	ACP1	+	FALSE
chr3	20025661	C	T	4.83976E-05	RAB5A,PP2D1	+,-	FALSE
chr1	109475629	A	G	0.00835	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr16	75480021	T	C	0.00270	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	26755643	A	G	0.00068	LIN28A	+	FALSE	AluSc	SINE,Alu
chr1	45975673	A	G	0.00539	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	145116142	A	T	0.00570	NBPF20,SEC22B	+	FALSE
chr1	10517313	T	C	0.00661		.	FALSE	AluJr	SINE,Alu
chr15	90819579	A	G	0.00933		.	FALSE	AluSx	SINE,Alu
chr1	19238556	G	A	6.03260E-07	IFFO2	-	FALSE
chr1	28833494	G	A	0.00901	SNHG3,RCC1	+	FALSE
chr2	176789478	T	C	0.00219	LNPK	-	TRUE	MSTB1	SINE,Alu
chr12	133314509	T	C	0.00229	ANKLE2	-	TRUE	AluJr	SINE,Alu
chr7	44841646	A	C	0.00316	PPIA	+	FALSE	AluJr	SINE,Alu
chr1	10517512	T	C	0.00646		.	FALSE	AluSx1	SINE,Alu
chr9	125609938	A	T	0.00904		.	FALSE
chr1	91990450	A	T	0.00091	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr16	713251	A	G	0.00628	WDR90	+	TRUE	AluSx	SINE,Alu
chr7	6501820	A	T	0.00288	KDELR2	-	FALSE
chr1	55207985	G	A	0.00156	MROH7-TTC4,TTC4	+	FALSE
chr3	14986104	T	C	6.10128E-05	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr17	79674375	C	T	0.00129	MRPL12	+	FALSE
chr5	35058802	T	C	0.00152	PRLR	-	FALSE
chr1	16889864	C	A	0.00598	NBPF1	-	FALSE
chr4	139086857	G	A	0.00809	SLC7A11-AS1,SLC7A11	+,-	FALSE
chr3	40578843	A	G	0.00221	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	9161550	G	A	0.00196		.	FALSE
chr1	27202959	T	C	0.00094		.	FALSE	AluSq2	SINE,Alu
chr6	132780768	G	A	0.00668	STX7	-	FALSE
chr1	12058869	C	T	0.00027	MFN2	+	FALSE
chr1	46033514	G	A	0.00073	AKR1A1	+	FALSE	AluYk3	SINE,Alu
chr2	3193040	G	A	0.00650	TSSC1	-	FALSE
chr3	197682724	T	A	0.00556	IQCG	-	FALSE
chr1	89648329	T	C	0.00093	GBP4	-	TRUE	AluYg6	SINE,Alu
chr4	2940477	T	C	1.61307E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr16	1411034	A	G	0.00322	GNPTG	+	TRUE	AluSz	SINE,Alu
chr5	96350710	G	A	0.00302	LNPEP	+	FALSE
chr3	195395402	C	A	0.00066	SDHAP2	+	FALSE
chr2	20450819	T	C	0.00807	PUM2	-	TRUE
chr1	66058513	A	G	0.00091	LEPR	+	FALSE
chr4	2940347	T	C	0.00466	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	59148136	T	C	0.00244	MYSM1	-	FALSE
chr1	53288862	A	G	0.00570	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	206637133	C	T	0.00909	SRGAP2	+	FALSE
chr1	117644949	C	G	0.00440	TTF2	+	FALSE
chr1	121133779	C	G	0.00567	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	10520202	T	C	0.00529		.	FALSE	AluSx	SINE,Alu
chr1	182569318	G	T	0.00829	RGS16	-	FALSE
chr1	1309464	C	T	3.88389E-12	AURKAIP1	-	FALSE
chr1	42881767	G	C	0.00437	RIMKLA	+	FALSE
chr7	137612915	G	A	0.00057	CREB3L2	-	FALSE
chr1	29095757	G	T	0.00739	YTHDF2	+	FALSE
chr1	23240255	G	A	0.00873	EPHB2	+	FALSE
chr1	168220341	A	G	0.00179		.	FALSE	AluSz6	SINE,Alu
chr1	3729217	T	C	0.00119	CEP104	-	TRUE	AluSx3	SINE,Alu
chr2	105963597	C	T	0.00898	C2orf49	+	FALSE
chr20	25427823	A	G	0.00054	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	40759231	A	G	0.00168	ZMPSTE24	+	FALSE
chr4	155456608	A	G	0.00734	PLRG1	-	FALSE	L1MC5	SINE,Alu
chr1	6311399	A	G	0.00126	GPR153	-	FALSE
chr17	5288084	T	A	0.00232	RABEP1	+	FALSE
chr1	204525649	A	G	0.00191	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	117945049	G	A	0.00030	MAN1A2	+	FALSE
chr1	151554503	T	C	0.00619	TUFT1	+	FALSE
chr5	139931630	A	T	0.00052	SRA1	-	FALSE
chr1	36789546	A	G	0.00562	EVA1B	-	FALSE	MIRb	SINE,Alu
chr7	91742142	C	A	0.00478	CYP51A1	-	FALSE	AluSx3	SINE,Alu
chr17	5289028	G	A	0.00849	RABEP1,NUP88	+,-	FALSE
chr2	232328545	C	T	0.00581	NCL	-	FALSE
chr5	76728039	T	G	0.00092	WDR41	-	FALSE
chr3	81698130	T	C	2.93981E-08	GBE1	-	FALSE
chr1	27204436	T	C	1.54117E-06		.	FALSE	AluSg7	SINE,Alu
chr20	43706946	A	G	0.00434	STK4	+	TRUE	AluSx4	SINE,Alu
chr1	244871041	T	A	0.00590	DESI2	+	FALSE
chr1	46828700	A	G	0.00012	NSUN4	+	FALSE
chr3	192515510	G	T	0.00559	MB21D2	-	FALSE
chr2	232319578	C	A	0.00844	NCL	-	FALSE	A-rich	SINE,Alu
chr1	1597020	C	G	0.00021	CDK11B,SLC35E2B	-	FALSE
chr1	145512078	A	G	0.00099	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	9162247	T	C	0.00549		.	FALSE	AluSx	SINE,Alu
chr8	30536078	T	C	5.73232E-10	GSR	-	FALSE	AluJr	SINE,Alu
chr1	227211026	C	G	0.00373	CDC42BPA	-	FALSE
chr17	65334802	T	C	1.10547E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	16910172	G	A	0.00023	NBPF1	-	FALSE
chr1	37945905	A	T	0.00038	ZC3H12A	+	FALSE
chr1	17735266	G	A	0.00471	RCC2	-	FALSE
chr12	133298917	A	G	0.00612	PGAM5	+	TRUE	AluSg	SINE,Alu
chr9	34088016	G	A	0.00226	DCAF12	-	FALSE
chr1	16112795	A	G	0.00106	FBLIM1	+	FALSE
chr1	186390303	A	C	0.00455	C1orf27	+	FALSE	L1ME3F	SINE,Alu
chr1	54691922	T	A	0.00415	SSBP3	-	FALSE
chr2	176791250	T	C	0.00078	LNPK	-	TRUE	MSTD	SINE,Alu
chr8	128944717	G	T	0.00091	PVT1	+	FALSE
chr1	53290298	A	G	0.00063	ZYG11B	+	TRUE	AluSg4	SINE,Alu
chr5	121400545	A	T	0.00740	LOX	-	FALSE
chr5	180669695	T	C	0.00101	RACK1	-	TRUE	AluSx1	SINE,Alu
chr17	72206017	T	A	6.66319E-05	RPL38	+	FALSE
chr4	17803748	T	A	0.00859	DCAF16	-	FALSE
chr2	11781593	G	T	0.00551	GREB1	+	FALSE
chr1	27182750	G	C	0.00141		.	FALSE
chr3	12877522	A	T	0.00956	RPL32	-	FALSE
chr1	16891340	T	A	0.00022	NBPF1	-	FALSE
chr1	47133835	C	A	1.43471E-05	ATPAF1	-	FALSE
chr1	200558363	T	C	1.35174E-05	KIF14	-	FALSE
chr1	10519973	T	C	0.00745		.	FALSE	AluJr	SINE,Alu
chr2	37329238	T	C	0.00249		.	FALSE	AluJr4	SINE,Alu
chr3	86991597	T	G	0.00481	VGLL3	-	FALSE
chr1	101444071	G	A	0.00963	SLC30A7	+	FALSE	MIR3	SINE,Alu
chr1	45975345	A	G	0.00127	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	113212976	C	T	0.00332	CAPZA1	+	FALSE
chr1	6932082	T	A	0.00330	CAMTA1	+	FALSE
chr2	61705067	A	T	0.00084		.	FALSE
chr1	220231484	T	C	0.00046	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr4	39549703	T	C	0.00150	UGDH-AS1,SMIM14	+,-	FALSE	AluSp	SINE,Alu
chr1	16112795	A	G	3.02097E-05	FBLIM1	+	FALSE
chr1	32385071	T	A	0.00436	PTP4A2	-	FALSE
chr1	70696606	C	A	0.00362	SRSF11	+	FALSE
chr1	234740975	G	A	0.00106	IRF2BP2	-	FALSE
chr15	41590291	A	C	0.00032	OIP5-AS1	+	FALSE
chr19	42376702	A	G	6.18708E-08		.	FALSE	AluSp	SINE,Alu
chr1	180855948	G	A	0.00218	XPR1	+	FALSE
chr17	76799795	G	A	0.00363	USP36	-	FALSE
chr1	52520866	C	T	0.00108	TXNDC12	-	FALSE
chr1	160967755	C	T	0.00563	F11R	-	FALSE	(T)n	SINE,Alu
chr1	19585207	G	A	0.00672	MRTO4	+	FALSE
chr1	10521200	T	C	3.54723E-07	DFFA	-	TRUE	AluY	SINE,Alu
chr1	24288530	A	T	0.00915	PNRC2	+	FALSE
chr1	179042719	A	G	2.68049E-06	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	16927379	T	A	0.00864	NBPF1	-	FALSE
chr14	70838324	T	C	0.00011	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr14	23794557	T	A	0.00983	BCL2L2-PABPN1,PABPN1	+	FALSE	A-rich	SINE,Alu
chr15	38643574	T	C	0.00455	SPRED1	+	FALSE
chr1	144618201	T	C	2.48995E-05	NBPF20,NBPF9	+	FALSE
chr1	46076468	A	G	0.00069	NASP	+	TRUE	AluSx	SINE,Alu
chr1	9162423	T	C	0.00074		.	FALSE	AluSx	SINE,Alu
chr1	45976722	G	T	0.00292	MMACHC,PRDX1	+,-	FALSE
chr2	26613949	A	G	0.00669	EPT1	+	FALSE
chr1	197053373	G	A	0.00124	ASPM	-	FALSE
chr9	137330714	A	C	0.00030	RXRA	+	FALSE
chr5	170837887	T	A	0.00401	NPM1	+	FALSE
chr17	3512398	T	C	0.00709	SHPK,TRPV1	-	TRUE	AluSx	SINE,Alu
chr1	46827871	G	A	0.00860	NSUN4	+	FALSE
chr1	21806710	T	G	0.00194	NBPF3	+	FALSE
chr1	28826150	A	G	0.00052	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr14	53109732	T	C	0.00013	ERO1A	-	TRUE	MER53	SINE,Alu
chr1	38278949	C	A	0.00664	MTF1	-	FALSE	AluSp	SINE,Alu
chr2	217366570	A	G	0.00332		.	FALSE	AluSz	SINE,Alu
chr1	38158211	C	T	0.00091	CDCA8	+	FALSE
chr1	144595943	A	G	0.00050	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	45975628	A	G	0.00465	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	148753329	A	G	7.42327E-05		.	FALSE
chr19	21131571	A	G	0.00120	ZNF85	+	FALSE
chr1	70696395	A	T	0.00364	SRSF11	+	FALSE
chr8	144681777	G	T	0.00383	TIGD5	+	FALSE
chr8	117784431	T	A	0.00422	UTP23	+	FALSE	AluSz6	SINE,Alu
chr1	145688956	A	G	0.00155	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	46033106	T	C	0.00547	AKR1A1	+	FALSE
chr1	160967856	T	C	0.00027	F11R	-	TRUE	AluSp	SINE,Alu
chr15	44055281	T	C	0.00580	PDIA3	+	FALSE
chr1	220323448	C	T	0.00986	RAB3GAP2	-	FALSE
chr1	10517659	T	C	0.00010		.	FALSE	AluSx1	SINE,Alu
chr1	148556743	G	A	0.00402		.	FALSE
chr1	161931628	G	C	0.00476	ATF6	+	FALSE
chr1	9328094	A	G	0.00107	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	16842064	A	C	0.00081		.	FALSE	MER41E	SINE,Alu
chr10	75009579	T	C	3.24788E-05	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr8	56985611	A	T	0.00028	RPS20	-	FALSE
chr12	88454641	A	T	0.00753	CEP290	-	FALSE
chr7	20177519	T	C	0.00885	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr5	93018884	A	C	0.00030	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr2	164466038	C	A	0.00021	FIGN	-	FALSE
chr1	3545194	C	G	0.00254	TPRG1L	+	FALSE
chr10	75009781	T	C	9.15447E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr1	10519190	T	C	0.00971		.	FALSE	AluSx3	SINE,Alu
chr1	9644847	A	G	0.00672		.	FALSE	AluJr	SINE,Alu
chr6	13788200	T	C	0.00879	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	181057874	T	G	0.00099	IER5	+	FALSE
chr1	33147942	A	G	0.00423	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr15	23282589	A	G	0.00291	HERC2P2	-	FALSE
chr1	20945055	C	T	0.00269	CDA	+	FALSE
chr1	10043363	A	G	0.00509	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr8	117858600	T	A	0.00015	RAD21	-	FALSE
chr10	101992793	T	C	0.00407	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr3	129033736	T	C	0.00309	H1FX	-	FALSE
chr1	143231313	G	A	0.00137		.	FALSE
chr2	37331560	T	C	0.00040		.	FALSE	AluJb	SINE,Alu
chr1	47184539	C	T	0.00425	EFCAB14	-	FALSE
chr1	16894514	C	T	0.00348	NBPF1	-	FALSE
chr7	65618249	A	G	0.00785	CRCP	+	TRUE	AluSp	SINE,Alu
chr10	60047608	A	G	0.00356	CISD1	+	FALSE	(A)n	SINE,Alu
chr1	144829799	G	C	2.98942E-05	NBPF20,NBPF9	+	FALSE	L1MC4	SINE,Alu

RBP	SNW1
Knock-Method	CRISPRi
RBP Family	Non-canonical_RBP
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR409OFU
Platform	HiSeq
Pubmed ID	32252787

SNW1 - Target Gene Network