RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	55462747	T	A	0.00163	RPS27A	+	FALSE
chr1	33149363	A	G	0.00237	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	32567573	G	A	0.00701	DYNC1LI1	-	FALSE	(AT)n	SINE,Alu
chr4	10443061	G	T	0.00057	ZNF518B	-	FALSE
chr19	54627915	C	T	0.00015	PRPF31	+	FALSE
chr19	18124755	A	G	0.00480	ARRDC2	+	FALSE
chr1	47767914	G	A	0.00636	STIL	-	FALSE
chr1	79109352	T	G	0.00818	IFI44L	+	FALSE	LTR26	SINE,Alu
chr1	19543247	T	C	5.23836E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	63790503	T	C	0.00289	FOXD3	+	FALSE
chr2	10179657	A	C	7.77751E-05		.	FALSE	L1ME4b	SINE,Alu
chr1	145512074	A	G	0.00084	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	10520154	T	C	0.00021		.	FALSE	AluSx	SINE,Alu
chr2	198416727	T	A	0.00378	HSPE1-MOB4,MOB4	+	FALSE
chr1	27202845	T	C	0.00034		.	FALSE	AluSq2	SINE,Alu
chr8	95804615	A	G	0.00968	DPY19L4	+	TRUE	AluSq2	SINE,Alu
chr1	145689568	A	G	8.25649E-05	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	8412652	A	C	0.00929	RERE	-	FALSE
chr1	949472	G	A	2.93477E-10	ISG15	+	FALSE
chr1	78414310	C	A	9.26299E-05	FUBP1	-	FALSE
chr1	10519982	T	C	0.00572		.	FALSE	AluJr	SINE,Alu
chr11	65404877	G	A	0.00106	PCNX3	+	FALSE
chr7	2473753	C	T	0.00806	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr19	23542157	T	C	0.00140	ZNF91	-	TRUE	AluY	SINE,Alu
chr1	16933628	A	G	0.00430	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	931939	G	A	0.00428		.	FALSE
chr1	167759573	T	C	0.00895	MPZL1	+	FALSE
chr7	94060363	T	G	2.98576E-06	COL1A2	+	FALSE
chr3	57551513	A	G	0.00037	PDE12	+	TRUE	AluSc	SINE,Alu
chr3	44791062	T	C	0.00035	KIAA1143	-	FALSE
chr1	1593828	G	C	0.00348	CDK11B,SLC35E2B	-	FALSE
chr4	39551166	T	C	0.00309	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr7	43665371	A	T	0.00430	STK17A,COA1	+,-	FALSE	(AG)n	SINE,Alu
chr2	39009425	A	G	0.00607		.	FALSE	AluSx3	SINE,Alu
chr1	201846634	C	A	0.00852	IPO9	+	FALSE	(CA)n	SINE,Alu
chr6	34254565	A	T	0.00617		.	FALSE	(A)n	SINE,Alu
chr1	45187511	T	C	7.71832E-06	C1orf228	+	FALSE	U5	SINE,Alu
chr1	46827871	G	A	0.00860	NSUN4	+	FALSE
chr4	3076659	A	C	0.00401	HTT	+	FALSE	(CAG)n	SINE,Alu
chr1	52375677	T	C	0.00542	RAB3B	-	FALSE	MIRb	SINE,Alu
chr2	114352179	G	A	1.68965E-05	WASH2P	+	FALSE
chr1	9324451	C	T	0.00266	H6PD	+	FALSE
chr5	125961509	A	G	0.00141	PHAX	+	TRUE	AluSz6	SINE,Alu
chr10	102308801	G	C	0.00127	HIF1AN	+	FALSE	(GT)n	SINE,Alu
chr1	230416399	G	T	5.37638E-05	GALNT2	+	FALSE
chr14	74526945	T	C	2.53258E-07	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr1	10519119	T	C	0.00892		.	FALSE	AluSx3	SINE,Alu
chr8	61655619	C	T	0.00475	CHD7	+	FALSE
chr3	22424405	T	A	0.00766		.	FALSE
chr17	1946503	C	G	0.00154	DPH1,OVCA2	+	FALSE
chr17	10578246	A	G	0.00093		.	FALSE
chr9	19376252	A	T	0.00367		.	FALSE
chr7	44841931	A	G	0.00054	PPIA	+	TRUE	AluSx	SINE,Alu
chr15	40462780	G	A	0.00251	BUB1B	+	FALSE
chr3	45125417	G	A	0.00024	CDCP1	-	FALSE	AluJb	SINE,Alu
chr1	47184569	G	C	0.00027	EFCAB14	-	FALSE
chr1	89518120	A	G	0.00453	GBP1	-	FALSE
chr4	56294628	T	C	0.00234	CLOCK	-	FALSE
chr1	53291425	A	G	0.00517	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr3	93846831	G	A	0.00547		.	FALSE	AluSq2	SINE,Alu
chr13	52327020	G	A	0.00019	WDFY2	+	FALSE
chr1	20978451	T	C	0.00193	PINK1-AS,DDOST	-	TRUE	AluY	SINE,Alu
chr1	39549983	G	A	0.00896	MACF1	+	FALSE
chr1	51822219	G	A	0.00325	EPS15	-	FALSE
chr3	44791351	T	C	0.00497	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr3	48787094	T	C	0.00518	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr10	61548859	A	C	0.00011	CCDC6	-	FALSE
chr1	52816674	T	C	1.79626E-07	CC2D1B	-	TRUE	AluSx1	SINE,Alu
chr1	36522460	A	G	0.00407		.	FALSE	AluSc	SINE,Alu
chr3	49394834	G	A	0.00000	GPX1	-	FALSE
chr1	28826118	A	G	0.00341	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	86049362	C	A	0.00140	CYR61	+	FALSE
chr1	10490539	G	C	0.00134	APITD1,APITD1-CORT	+	FALSE
chr1	9160900	T	C	0.00542		.	FALSE	AluJb	SINE,Alu
chr1	53289860	A	G	0.00119	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	20977380	T	C	0.00429	PINK1,PINK1-AS	+,-	FALSE
chr2	72405098	C	A	0.00646	EXOC6B	-	FALSE
chr1	1653093	A	G	0.00674	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr1	207942336	A	G	0.00586	CD46	+	TRUE	AluSg4	SINE,Alu
chr12	125511952	A	G	0.00138	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	2323041	T	C	0.00970	MORN1	-	FALSE
chr8	23049112	T	C	0.00774	TNFRSF10A	-	TRUE
chr8	146016990	C	T	0.00027	RPL8	-	FALSE
chr5	125961816	A	G	0.00013	PHAX	+	TRUE	FLAM_C	SINE,Alu
chr10	75009591	T	C	8.39163E-08	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr1	36534934	A	G	0.00464		.	FALSE	AluJo	SINE,Alu
chr1	114306369	A	T	0.00341	RSBN1	-	FALSE
chr17	53470462	C	T	0.00230	MMD	-	FALSE
chr6	158093827	C	T	0.00201	ZDHHC14	+	FALSE
chr3	15113847	T	C	0.00026	RBSN	-	TRUE	AluSz6	SINE,Alu
chr2	37431563	A	G	0.00993	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	85020487	C	T	0.00120	SPATA1,CTBS	+,-	FALSE
chr1	155853061	A	G	0.00146	SYT11	+	TRUE	AluJb	SINE,Alu
chr1	25717365	C	G	0.00229	RHCE	-	FALSE
chr8	30536146	T	C	1.15312E-06	GSR	-	TRUE	AluJr	SINE,Alu
chr5	94050487	T	A	0.00380	MCTP1	-	FALSE
chr3	149459413	C	T	0.00097	COMMD2	-	FALSE
chr1	21940555	C	T	0.00907	RAP1GAP	-	FALSE
chr16	74698535	T	C	0.00607	RFWD3	-	TRUE	AluSx3	SINE,Alu
chr5	40829780	T	C	0.00753		.	FALSE	LTR66	SINE,Alu
chr1	1593857	T	C	0.00424	CDK11B,SLC35E2B	-	FALSE
chr5	138705183	T	A	9.01084E-05	PAIP2,SLC23A1	+,-	FALSE
chr2	206987205	T	C	0.00039		.	FALSE	AluSx	SINE,Alu
chr1	93828523	T	A	0.00155		.	FALSE
chr17	57656854	C	T	0.00928	DHX40	+	FALSE
chr1	10517691	T	C	0.00558		.	FALSE	AluSx1	SINE,Alu
chr15	42503335	T	C	0.00023	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr1	10519947	T	C	0.00328		.	FALSE	AluJr	SINE,Alu
chr3	178740415	G	A	0.00227	ZMAT3	-	FALSE
chr6	13788342	T	C	0.00454	MCUR1	-	TRUE	AluSx	SINE,Alu
chr2	64327544	G	T	0.00340	PELI1	-	FALSE
chr1	19543353	T	C	0.00377	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	8045340	C	A	0.00242	PARK7	+	FALSE
chr1	16918502	A	G	0.00098	NBPF1	-	FALSE
chr1	11979815	A	C	0.00042	KIAA2013	-	FALSE
chr2	30381505	T	C	0.00820	YPEL5	+	FALSE
chr1	27202812	T	C	0.00388		.	FALSE	AluSq2	SINE,Alu
chr1	144930596	C	A	0.00578	NBPF20,PDE4DIP	+,-	FALSE
chr3	45722253	A	G	0.00663	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr2	102508658	T	A	0.00275	MAP4K4	+	FALSE
chr4	17626174	T	A	0.00534	MED28	+	FALSE
chr3	42599091	G	A	0.00196	SEC22C	-	FALSE
chr1	145826918	G	C	0.00829	NBPF20,NBPF10,GPR89A	+,-	FALSE
chr2	37331525	T	C	0.00020		.	FALSE	AluJb	SINE,Alu
chr7	65992794	T	C	0.00820		.	FALSE	AluJr	SINE,Alu
chr1	19543799	T	C	0.00076	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chrX	2825114	T	C	0.00738	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	222713503	C	G	0.00860	HHIPL2	-	FALSE
chr1	33961147	T	G	0.00236	ZSCAN20	+	FALSE
chr2	54858511	C	T	0.00124	SPTBN1	+	FALSE
chr2	44459528	G	A	0.00100	PPM1B	+	FALSE
chr1	204520442	A	G	7.81381E-05	MDM4	+	TRUE	AluJb	SINE,Alu
chr2	176791182	T	C	0.00015	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	28662213	A	G	0.00013	MED18	+	TRUE	AluSq2	SINE,Alu
chr2	113287424	T	A	0.00361	TTL	+	FALSE
chr3	44839350	A	C	0.00837	KIF15	+	FALSE
chr1	85742157	G	C	0.00514	BCL10,LOC646626	+,-	FALSE
chr1	53289940	A	G	0.00245	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	68940566	A	C	0.00126	DEPDC1	-	FALSE
chr12	9395329	G	A	0.00814	LINC00987	+	FALSE
chr4	129795660	T	A	0.00454	JADE1	+	FALSE
chr1	19543247	T	C	5.35430E-06	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	113673737	A	G	0.00798		.	FALSE	AluSx1	SINE,Alu
chr1	1001422	G	T	0.00998		.	FALSE	LTR13A	SINE,Alu
chr3	197362030	C	T	0.00302		.	FALSE
chr1	54493259	T	C	0.00203	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr1	206516261	C	T	0.00179	SRGAP2	+	FALSE
chr1	8413129	G	A	0.00040	RERE	-	FALSE
chr12	9464178	G	A	0.00081	LOC642846	+	FALSE
chr14	20923558	A	C	0.00373	APEX1	+	FALSE
chr1	10517526	T	C	0.00364		.	FALSE	AluSx1	SINE,Alu
chr1	45244413	T	A	0.00748		.	FALSE
chr8	11701429	T	C	0.00496	CTSB	-	TRUE	AluSx1	SINE,Alu
chr2	176791181	T	C	0.00063	LNPK	-	TRUE	MSTD	SINE,Alu
chr15	42861705	A	G	0.00518	HAUS2	+	TRUE	AluJb	SINE,Alu
chr1	93827764	A	G	0.00053	DR1	+	FALSE
chr1	1337334	G	T	0.00549	LOC148413,MRPL20	+,-	FALSE
chrX	16782911	A	G	0.00051		.	FALSE	AluJb	SINE,Alu
chr1	16889423	G	C	6.92544E-07	NBPF1	-	FALSE	L1MC4	SINE,Alu
chr3	14526656	A	G	0.00189	SLC6A6	+	FALSE
chr7	129472357	A	G	0.00287	UBE2H	-	FALSE
chr1	201488170	A	G	0.00997		.	FALSE	AluSz	SINE,Alu
chr1	155181396	A	G	0.00209	MTX1	+	FALSE
chr2	70504926	A	G	0.00671	PCYOX1	+	FALSE	MER5A	SINE,Alu
chr1	24293612	G	A	0.00366		.	FALSE
chr1	144821900	C	G	6.24876E-05	NBPF20,NBPF9	+	FALSE
chr1	206579798	T	C	0.00883	SRGAP2	+	FALSE
chr1	27216740	G	A	0.00801	GPN2	-	FALSE
chr1	179044242	A	G	0.00335	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	26802457	C	A	0.00962	HMGN2	+	FALSE
chr2	69689699	T	C	0.00800	AAK1	-	TRUE	AluSg	SINE,Alu
chr4	144475125	T	G	0.00133	SMARCA5	+	FALSE
chr17	42880118	T	C	0.00140	GJC1	-	TRUE	AluJb	SINE,Alu
chr1	22200473	C	T	0.00039	HSPG2	-	FALSE
chr12	98942665	A	G	1.31028E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr2	239355561	A	G	0.00343	ASB1	+	FALSE
chr1	111682307	G	C	5.71833E-05	DRAM2,CEPT1	+,-	FALSE
chr2	7182946	T	C	0.00748	RNF144A	+	FALSE
chr2	47399601	A	G	0.00102	CALM2	-	FALSE
chr1	16892918	T	C	0.00128	NBPF1	-	FALSE
chr1	33148691	A	G	0.00032	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr4	79832870	A	T	0.00655	BMP2K	+	FALSE
chr17	37618251	T	G	0.00959	CDK12	+	FALSE	G-rich	SINE,Alu
chr9	127711532	T	C	0.00018	SCAI	-	TRUE	AluSp	SINE,Alu
chr7	66105198	C	A	0.00456	KCTD7	+	FALSE
chr2	99812464	A	G	0.00998	MRPL30	+	TRUE	AluSx	SINE,Alu
chr3	183898428	T	G	0.00611	AP2M1	+	FALSE
chrX	2824894	T	C	0.00770	ARSD	-	TRUE	AluSx1	SINE,Alu
chr11	94606941	T	C	0.00699	AMOTL1	+	FALSE
chr7	112579815	G	T	0.00997	BMT2	-	FALSE	(CGC)n	SINE,Alu
chr2	37429733	A	G	0.00381	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr4	99801986	C	A	0.00687	EIF4E	-	FALSE
chr14	50713578	T	C	0.00260	L2HGDH	-	TRUE	AluSx	SINE,Alu
chr16	11445552	T	C	0.00533	RMI2	+	FALSE
chrX	77083548	T	C	0.00205	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	16893686	G	C	0.00138	NBPF1	-	FALSE
chr1	92976590	G	A	0.00768	EVI5	-	FALSE
chr4	10076860	G	A	1.69987E-09	WDR1	-	FALSE
chr1	109747437	A	G	0.00104	KIAA1324	+	TRUE	AluJr4	SINE,Alu
chr3	142772593	G	A	0.00135	U2SURP	+	FALSE
chr1	10517635	T	C	7.30839E-07		.	FALSE	AluSx1	SINE,Alu
chr1	145688983	A	G	0.00101	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr1	143135166	G	T	0.00325	LOC102723769	-	FALSE
chr1	183213770	G	C	0.00734	LAMC2	+	FALSE
chr1	148595665	A	G	0.00062	NBPF15	+	TRUE	L1MC4	SINE,Alu
chr12	56215103	A	T	0.00353	DNAJC14	-	FALSE
chr1	44072018	C	T	0.00160	PTPRF	+	FALSE
chr1	10517635	T	C	0.00124		.	FALSE	AluSx1	SINE,Alu
chr1	32793185	C	T	0.00015	HDAC1	+	FALSE
chr1	17298138	A	T	0.00465	CROCC	+	FALSE
chr1	145283718	G	A	0.00897	NBPF20,NOTCH2NL	+	FALSE
chr5	125961447	A	G	0.00563	PHAX	+	TRUE	AluSz6	SINE,Alu
chr6	26096636	A	G	0.00531		.	FALSE	AluSg	SINE,Alu
chr1	159946783	A	G	0.00097	LINC01133	+	FALSE	(GAAA)n	SINE,Alu
chr20	18468633	C	A	3.51877E-10	RBBP9	-	FALSE
chr8	41400022	A	G	0.00148	LOC102723729,GINS4	+,-	FALSE	AluY	SINE,Alu
chr22	18572730	A	G	6.64824E-05	PEX26	+	TRUE	AluYf1	SINE,Alu
chr1	10518052	T	C	0.00791		.	FALSE	AluJr	SINE,Alu
chr3	192515557	G	A	0.00130	MB21D2	-	FALSE
chr3	56654248	T	G	3.99921E-06	CCDC66,FAM208A	+,-	FALSE
chr1	154554947	T	G	0.00511	ADAR	-	FALSE
chr19	58356540	A	G	0.00019	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr1	6583066	T	C	0.00088	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	27879797	C	A	0.00246	AHDC1	-	FALSE	MIRb	SINE,Alu
chr5	79923793	T	C	0.00074	DHFR	-	TRUE	AluSp	SINE,Alu
chr9	136335345	G	A	0.00490	CACFD1	+	FALSE	(TG)n	SINE,Alu
chr3	43098969	T	G	0.00596	FAM198A	+	FALSE	L1ME3G	SINE,Alu
chr1	155058663	G	A	0.00300	EFNA3	+	FALSE
chr1	16889820	C	T	0.00709	NBPF1	-	FALSE
chr1	87811100	A	T	0.00084	LMO4	+	FALSE
chr1	45975331	A	G	0.00081	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr3	194125524	C	T	0.00271	ATP13A3	-	FALSE
chr5	139931627	C	T	0.00073	SRA1	-	FALSE
chr3	88104168	C	T	0.00919	CGGBP1	-	FALSE
chr2	37331560	T	C	0.00040		.	FALSE	AluJb	SINE,Alu
chr1	1718810	G	A	5.85228E-05	GNB1	-	FALSE
chr2	101587455	C	T	0.00178	NPAS2	+	FALSE
chr1	10519064	T	C	0.00012		.	FALSE	AluSx3	SINE,Alu
chr3	50150360	A	G	0.00827	RBM5	+	TRUE	AluSx	SINE,Alu
chr14	53109810	T	C	0.00463	ERO1A	-	TRUE	MER53	SINE,Alu
chr1	1419768	A	G	0.00250	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	26158906	C	A	0.00362	MTFR1L,AUNIP	+,-	FALSE
chr3	197612334	A	G	0.00070		.	FALSE	AluSp	SINE,Alu
chr3	30047174	A	T	0.00556	RBMS3	+	FALSE
chr7	144060286	A	G	0.00674	ARHGEF5	+	FALSE
chr5	112350098	C	T	7.36383E-05	DCP2	+	FALSE
chr1	25889176	C	T	3.50303E-06	LDLRAP1	+	FALSE
chr1	145369589	T	C	0.00046	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	28835847	A	G	4.14471E-06	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr4	1380585	A	G	0.00644	UVSSA	+	TRUE	AluJr	SINE,Alu
chr3	179117280	T	C	0.00624	GNB4	-	TRUE	AluSz	SINE,Alu
chr19	21907988	C	T	0.00295	ZNF100	-	FALSE
chr1	55224131	T	C	0.00169	PARS2	-	FALSE
chr1	6283264	T	C	0.00127	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	16894514	C	T	0.00270	NBPF1	-	FALSE
chr1	54412181	T	C	0.00524	LRRC42	+	FALSE
chr1	213244381	G	A	0.00345	RPS6KC1	+	FALSE
chr1	28785597	G	C	0.00595	PHACTR4	+	FALSE
chr12	124069108	G	A	0.00635	TMED2	+	FALSE	(GCG)n	SINE,Alu
chr17	5289028	G	A	0.00849	RABEP1,NUP88	+,-	FALSE
chr1	3545183	A	T	0.00347	TPRG1L	+	FALSE
chr4	10099340	T	C	0.00000	WDR1	-	FALSE
chr1	10517613	T	C	0.00499		.	FALSE	AluSx1	SINE,Alu
chr1	144917546	A	G	0.00614	NBPF20,PDE4DIP	+,-	FALSE
chr1	169811639	G	C	0.00134	C1orf112	+	FALSE
chr1	33149414	A	G	0.00990	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	208198625	C	T	8.83580E-05	PLXNA2	-	FALSE
chr1	229762054	T	A	0.00084	URB2	+	FALSE
chr1	205737665	G	T	0.00078	RAB29	-	FALSE	AluSq2	SINE,Alu
chrM	10307	A	C	0.00588		.	FALSE
chr1	145291494	A	G	0.00738	NBPF20	+	FALSE	MIRb	SINE,Alu
chr4	17804879	T	C	0.00863	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	234744480	G	A	0.00237	IRF2BP2	-	FALSE
chr6	42857542	T	A	0.00029	RPL7L1	+	FALSE	MIRc	SINE,Alu
chr1	33148736	A	G	4.97736E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	150704486	T	C	0.00947	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	87573327	T	C	0.00571	HS2ST1	+	FALSE	(AT)n	SINE,Alu
chr2	55452459	G	T	5.59903E-07	CLHC1	-	FALSE
chr4	7762675	C	T	3.92312E-07	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	161753841	G	A	0.00039	ATF6	+	FALSE
chr1	3545189	T	G	0.00027	TPRG1L	+	FALSE
chr1	38155699	T	G	0.00734	C1orf109	-	FALSE	AluSx1	SINE,Alu
chr1	16861718	C	T	0.00891	LOC100132147	-	FALSE
chr1	168220340	A	G	0.00960		.	FALSE	AluSz6	SINE,Alu
chr8	30536078	T	C	0.00509	GSR	-	FALSE	AluJr	SINE,Alu
chr1	212911836	T	C	0.00675	NSL1	-	FALSE
chr1	67895926	A	G	0.00705	SERBP1	-	FALSE
chr1	9162394	T	C	0.00072		.	FALSE	AluSx	SINE,Alu
chr8	48889659	A	G	1.71928E-05	MCM4	+	TRUE	AluSx3	SINE,Alu
chr2	99812465	A	G	2.16984E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	23636016	T	G	0.00796	HNRNPR	-	FALSE
chr3	126156660	C	G	0.00182	ZXDC	-	FALSE
chr1	28836973	A	G	0.00289	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	53288862	A	G	0.00155	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr17	25640011	A	G	0.00228	WSB1	+	TRUE	AluSx	SINE,Alu
chr1	10520174	T	C	0.00413		.	FALSE	AluSx	SINE,Alu
chr4	2940098	T	C	0.00034	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr2	203742324	T	C	0.00482		.	FALSE	AluJb	SINE,Alu
chr7	100739267	G	A	0.00654		.	FALSE	AluSx	SINE,Alu
chr3	129152089	G	A	0.00154	MBD4	-	FALSE
chr1	158066172	C	T	0.00616	KIRREL	+	FALSE
chr1	53288870	A	G	0.00501	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	89447868	G	T	0.00585	KYAT3,RBMXL1	-	FALSE
chr1	109240641	T	A	0.00090	PRPF38B	+	FALSE
chr17	73940094	T	C	0.00557	ACOX1	-	TRUE	AluJb	SINE,Alu
chr1	100489835	A	G	0.00230	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr1	6282400	T	C	0.00601	ICMT	-	TRUE	AluSz	SINE,Alu
chr4	120979178	T	C	0.00433		.	FALSE	AluSg4	SINE,Alu
chr1	1594977	T	C	0.00344	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr5	122359499	C	A	0.00304	PPIC	-	FALSE	(AC)n	SINE,Alu
chr4	177252327	A	G	2.51883E-09	SPCS3	+	TRUE
chr1	1662694	T	C	0.00398	SLC35E2	-	TRUE	AluY	SINE,Alu
chr2	153512503	C	T	0.00082	PRPF40A	-	FALSE
chr1	44685732	T	C	9.79150E-12	DMAP1	+	FALSE
chr1	31732602	C	A	0.00336	SNRNP40	-	FALSE
chr2	99812988	A	G	0.00793	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	92862804	A	G	0.00043		.	FALSE	AluJr	SINE,Alu
chr6	29857578	A	G	0.00280		.	FALSE
chr2	37075013	T	A	0.00119	STRN	-	FALSE
chr1	145512078	A	G	0.00907	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	37331555	T	C	0.00171		.	FALSE	AluJb	SINE,Alu
chr1	19542464	T	C	0.00140	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	118408218	C	A	0.00857	GDAP2	-	FALSE
chr2	47137976	T	C	0.00398	MCFD2	-	TRUE	AluJr	SINE,Alu
chr1	183876182	C	T	0.00494	RGL1	+	FALSE
chr2	118583874	C	G	0.00569	DDX18	+	FALSE
chr1	9644587	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr1	200375846	G	T	0.00040	ZNF281	-	FALSE	(T)n	SINE,Alu
chr16	9204015	C	T	0.00325	C16orf72	+	FALSE
chr1	179327010	A	G	0.00085	SOAT1	+	TRUE
chr1	244219904	T	G	0.00482	ZBTB18	+	FALSE
chr11	32623987	T	A	5.29256E-06	CCDC73,EIF3M	+,-	FALSE
chr4	95588274	G	A	0.00095	PDLIM5	+	FALSE
chr2	20450819	T	C	0.00807	PUM2	-	TRUE
chr8	41399648	A	G	0.00037	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr1	28661576	A	G	0.00625	MED18	+	TRUE	AluSg	SINE,Alu
chr1	1431295	T	C	3.55878E-05	ATAD3B	+	FALSE
chr6	38140505	A	G	0.00109	BTBD9	-	FALSE
chr1	990773	C	T	0.00486	AGRN	+	FALSE
chr3	196078364	G	A	6.64958E-05		.	FALSE	GA-rich	SINE,Alu
chr2	203744240	T	C	0.00595		.	FALSE	AluSx	SINE,Alu
chr2	10933249	C	T	0.00889	PDIA6	-	FALSE
chr1	36068295	T	C	2.11660E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	24861704	G	A	0.00345	RCAN3	+	FALSE
chr2	37331627	T	C	0.00910		.	FALSE	AluJb	SINE,Alu
chr1	54692334	T	C	0.00021	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	35320644	A	T	0.00627	SMIM12	-	FALSE
chr4	128756656	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr1	10519946	T	C	0.00080		.	FALSE	AluJr	SINE,Alu
chr1	6582868	T	C	0.00368	NOL9	-	TRUE	AluSg	SINE,Alu
chr2	219523584	C	T	0.00299	ZNF142	-	FALSE
chr3	156258295	T	C	0.00096	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	955597	G	T	3.81431E-06	AGRN	+	FALSE
chr5	125961810	A	G	3.92353E-06	PHAX	+	TRUE	FLAM_C	SINE,Alu
chr1	160965287	T	C	0.00766	F11R	-	TRUE	AluSc	SINE,Alu
chr1	10517672	T	C	0.00257		.	FALSE	AluSx1	SINE,Alu
chr1	165877666	T	C	0.00327	UCK2	+	FALSE	(T)n	SINE,Alu
chr15	90820068	A	G	0.00194		.	FALSE	AluY	SINE,Alu
chr6	114178850	G	C	0.00045	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr1	16944953	T	G	0.00158	CROCCP2	-	FALSE
chr7	44917281	T	C	0.00222	PURB	-	TRUE	AluSz	SINE,Alu
chr1	36032276	A	T	0.00012	NCDN	+	FALSE	(CA)n	SINE,Alu
chr1	326539	A	G	0.00450		.	FALSE
chr1	120286837	A	G	0.00153	PHGDH	+	FALSE
chr2	233446568	G	A	0.00900	EIF4E2	+	FALSE
chr4	56291751	A	C	0.00291	TMEM165	+	FALSE
chr14	74526952	T	C	0.00019	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr1	144931392	G	A	0.00241	NBPF20,PDE4DIP	+,-	FALSE
chr1	144833382	C	T	0.00325	NBPF20	+	FALSE	L1MEc	SINE,Alu
chr1	19585917	T	A	0.00308	MRTO4	+	FALSE	AluJr	SINE,Alu
chr1	145322843	C	T	0.00271	NBPF20,NBPF10	+	FALSE
chr1	3761479	C	T	0.00226	CEP104	-	FALSE
chr1	47142539	T	A	0.00066	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	26138358	C	T	0.00645	SEPN1	+	FALSE
chr1	32638906	C	T	4.63739E-10	KPNA6	+	FALSE
chr3	149036714	G	A	0.00972	TM4SF18	-	FALSE
chr3	179117663	G	C	6.59793E-05	GNB4	-	FALSE
chr1	11347154	A	T	0.00441	UBIAD1	+	FALSE
chr10	63829539	C	T	0.00918	ARID5B	+	FALSE
chr8	17089564	T	C	0.00165	CNOT7	-	FALSE
chr7	100860467	C	G	0.00267	PLOD3	-	FALSE
chr3	14986111	T	C	0.00224	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	85786299	T	A	0.00502	DDAH1	-	FALSE
chr3	195635455	T	C	0.00158	TNK2	-	FALSE
chr5	64964623	T	C	1.14652E-05	SGTB	-	TRUE	AluSx1	SINE,Alu
chr14	19686683	G	A	0.00021	DUXAP10	+	FALSE
chr1	19543282	T	C	0.00020	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu

RBP	NUSAP1
Knock-Method	shRNA
RBP Family	Non-canonical_RBP
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR180XTP
Platform	HiSeq
Pubmed ID	32252787

NUSAP1 - Target Gene Network