RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr20	62598815	C	T	0.00711	ZNF512B	-	FALSE
chr6	34213986	T	A	0.00262	HMGA1	+	FALSE
chr5	256514	G	C	0.00198	SDHA	+	FALSE
chr1	21779925	T	G	0.00860	NBPF3	+	FALSE	ERVL-E-int	SINE,Alu
chr2	202029997	A	G	0.00335	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chr1	20826781	C	T	1.74444E-05	MUL1	-	FALSE
chr1	1337737	G	C	2.51903E-05	MRPL20	-	FALSE
chr12	125627187	C	T	0.00055	AACS	+	FALSE
chr1	86049364	A	G	0.00207	CYR61	+	FALSE
chr7	152342999	T	C	0.00313		.	FALSE	FRAM	SINE,Alu
chr1	19234103	G	A	0.00014	IFFO2	-	FALSE
chr10	1086801	G	C	0.00421	IDI2-AS1,IDI1	+,-	FALSE
chr8	10689212	C	T	3.39921E-05	PINX1	-	FALSE
chr12	69158881	A	G	0.00219	SLC35E3	+	TRUE	AluSp	SINE,Alu
chr1	16933629	A	G	0.00310	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	92862337	A	G	0.00595		.	FALSE	AluSp	SINE,Alu
chr1	176132119	G	C	0.00134	RFWD2	-	FALSE	L3b	SINE,Alu
chr5	125961573	A	G	0.00217	PHAX	+	TRUE	AluSz6	SINE,Alu
chr19	11257644	T	C	0.00991	SPC24	-	TRUE	AluSp	SINE,Alu
chr1	1344998	A	G	0.00062		.	FALSE	AluSg	SINE,Alu
chr1	9162933	C	T	0.00088		.	FALSE
chr14	74524774	T	C	0.00906	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr1	100658578	G	A	0.00030	DBT	-	FALSE
chr1	142660333	G	A	8.80387E-05		.	FALSE
chr1	117910682	G	A	0.00013	MAN1A2	+	FALSE
chr2	216903544	T	C	0.00929	PECR	-	TRUE	AluSx3	SINE,Alu
chr5	77655392	T	C	0.00080	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr1	145512074	A	G	0.00014	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	171699153	C	G	0.00247	GAD1	+	FALSE
chr2	181737842	C	T	0.00350	SCHLAP1	+	FALSE
chr5	118174735	T	C	0.00139	DTWD2	-	TRUE	AluY	SINE,Alu
chr2	10586899	G	A	0.00312	ODC1,SNORA80B	-	FALSE
chr2	103332887	T	A	0.00515	MFSD9	-	FALSE	L2d2	SINE,Alu
chr1	95658358	T	C	0.00633	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr4	25253995	C	T	9.95051E-10	PI4K2B	+	FALSE
chr19	9673113	T	C	0.00330		.	FALSE	AluSx3	SINE,Alu
chr4	178281754	G	A	0.00057	NEIL3	+	FALSE
chr1	179044309	A	G	0.00558	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	70610735	T	C	0.00259	LRRC40	-	FALSE
chr1	48764419	C	T	0.00478	SPATA6	-	FALSE
chr4	1305799	C	T	0.00730	MAEA	+	FALSE
chr1	109474776	A	G	0.00149	GPSM2,CLCC1	+,-	FALSE	AluSz	SINE,Alu
chr1	167511256	T	C	0.00838	CREG1	-	FALSE
chr1	197128726	G	A	2.50329E-05	ZBTB41	-	FALSE
chr2	28636644	A	G	0.00269	FOSL2	+	FALSE
chr1	203766872	G	A	1.42518E-06	ZC3H11A,ZBED6	+	FALSE
chr1	26449336	A	G	0.00343	PDIK1L	+	FALSE
chr8	30535980	T	C	0.00038	GSR	-	TRUE	AluJr	SINE,Alu
chr1	36770602	T	G	0.00441	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	114515717	G	A	0.00018	HIPK1	+	FALSE
chr1	11783902	A	G	0.00336		.	FALSE	AluSq	SINE,Alu
chr17	65334766	T	C	4.45484E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr22	18571457	A	G	0.00025	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	151027536	G	C	0.00518	CDC42SE1	-	FALSE
chr2	29023124	G	T	0.00477	PPP1CB	+	FALSE
chr9	140709880	C	T	0.00178	EHMT1	+	FALSE
chr1	79109331	G	T	0.00379	IFI44L	+	FALSE	LTR26	SINE,Alu
chr4	5743512	T	C	0.00210	EVC	+	FALSE
chr1	40213628	A	G	0.00058	PPIE	+	TRUE	FRAM	SINE,Alu
chr2	191555984	T	A	0.00171	NAB1	+	FALSE
chr1	26158906	C	A	0.00362	MTFR1L,AUNIP	+,-	FALSE
chr6	42857111	A	G	0.00681	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr4	2951804	A	G	7.08227E-08	NOP14-AS1,NOP14	+,-	FALSE
chr1	36068364	T	C	0.00195	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	53250625	T	C	0.00178	ZYG11B	+	FALSE
chr19	19791274	A	G	7.64703E-05	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr1	156692049	A	T	6.25184E-05	ISG20L2	-	FALSE
chr1	28566320	T	C	0.00309		.	FALSE	AluSx1	SINE,Alu
chr16	75479467	T	C	0.00160	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	179044100	A	G	0.00081	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	224575827	T	C	0.00214	WDR26	-	FALSE
chr5	81571875	A	T	0.00072	RPS23	-	FALSE
chr2	87821033	C	A	0.00474		.	FALSE
chr1	42881767	G	C	0.00437	RIMKLA	+	FALSE
chr1	113213004	G	T	0.00206	CAPZA1	+	FALSE
chr5	139931632	C	G	0.00052	SRA1	-	FALSE
chr1	179325847	A	G	7.26692E-05	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	160967856	T	C	0.00116	F11R	-	TRUE	AluSp	SINE,Alu
chr6	42855057	A	G	0.00034	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr17	67539228	G	C	0.00200		.	FALSE
chr1	52381348	T	G	0.00500	RAB3B	-	FALSE
chr2	37327590	T	C	0.00364		.	FALSE
chr1	1597423	C	T	1.10134E-13	CDK11B,SLC35E2B	-	FALSE
chr17	55752444	C	T	0.00000	MSI2	+	FALSE
chr1	23519504	T	A	3.21384E-05	HTR1D	-	FALSE
chr15	52840681	C	T	0.00789	ARPP19	-	FALSE	AluSx1	SINE,Alu
chr6	33281842	G	T	0.00514		.	FALSE
chr1	931807	G	A	0.00578		.	FALSE
chr1	1421531	C	A	0.00467	ATAD3B	+	FALSE
chr5	179157298	T	G	0.00816	CANX	+	FALSE
chr14	53242354	T	C	3.85910E-06	GNPNAT1	-	TRUE	AluJo	SINE,Alu
chr1	32697071	C	A	0.00134	EIF3I	+	FALSE	AluSp	SINE,Alu
chr3	73115126	A	T	0.00228	PPP4R2	+	FALSE
chr2	191556849	A	T	0.00158	NAB1	+	FALSE
chr1	10519946	T	C	0.00401		.	FALSE	AluJr	SINE,Alu
chr1	28661692	A	G	0.00219	MED18	+	TRUE	AluSg	SINE,Alu
chr3	15113519	C	T	0.00108	RBSN	-	FALSE
chr1	144931330	C	T	0.00066	NBPF20,PDE4DIP	+,-	FALSE
chr5	118173627	T	C	0.00075	DTWD2	-	TRUE
chr1	9331101	A	G	0.00072	H6PD	+	FALSE	AluSx	SINE,Alu
chr1	32827843	G	C	0.00275	FAM229A	-	FALSE
chr1	78445292	A	G	7.48186E-07	DNAJB4	+	FALSE
chr16	88785189	T	C	0.00636	PIEZO1	-	TRUE	AluJr	SINE,Alu
chr1	19234174	A	G	0.00046	IFFO2	-	FALSE
chr3	48787011	T	C	0.00040	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr7	91742142	C	A	0.00478	CYP51A1	-	FALSE	AluSx3	SINE,Alu
chr1	11783889	A	G	0.00746		.	FALSE	AluSq	SINE,Alu
chr1	212459257	A	G	0.00068	PPP2R5A	+	FALSE
chr2	114356336	C	T	0.00680	WASH2P	+	FALSE
chr1	45975670	A	G	0.00530	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	6932082	T	A	0.00330	CAMTA1	+	FALSE
chr1	15992470	G	A	0.00605		.	FALSE
chr12	120898697	A	G	0.00488	GATC	+	TRUE	AluY	SINE,Alu
chr1	205687213	T	A	0.00950	NUCKS1	-	FALSE
chr1	145281408	C	T	0.00220	NBPF20,NOTCH2NL	+	FALSE
chr1	204525672	A	G	0.00375	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	11298093	C	T	1.54321E-14	MTOR	-	FALSE
chr6	114182271	G	A	0.00011	MARCKS	+	FALSE
chr21	34728215	A	G	0.00153	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr1	205686520	A	G	0.00980	NUCKS1	-	FALSE
chr1	16133912	T	C	0.00126	UQCRHL	-	TRUE
chr3	184766301	T	C	0.00648	VPS8	+	FALSE
chr1	32739982	G	A	0.00300	LCK	+	FALSE
chr17	7760704	A	G	0.00297	NAA38	-	FALSE
chr3	196555443	C	A	3.82991E-09	PAK2	+	FALSE
chr17	38438362	G	A	0.00016	WIPF2	+	FALSE	A-rich	SINE,Alu
chr5	159492107	A	T	0.00332	TTC1	+	FALSE
chr18	60998527	C	G	0.00078	KDSR	-	FALSE	(AGAGAGAC)n	SINE,Alu
chr1	22400702	T	C	0.00883	CDC42	+	FALSE	AluSc8	SINE,Alu
chr1	1152601	A	G	0.00075	SDF4	-	FALSE
chr16	23478710	C	A	0.00335	GGA2	-	FALSE	(AC)n	SINE,Alu
chr19	42375586	A	G	0.00404		.	FALSE	AluSx	SINE,Alu
chr1	16945227	G	T	0.00090	CROCCP2	-	FALSE
chr1	113672616	A	G	0.00940		.	FALSE	AluJb	SINE,Alu
chr1	6160958	A	G	0.00967	KCNAB2	+	FALSE
chr12	25357680	T	C	0.00861	ETFRF1	+	FALSE
chr1	6659505	G	A	0.00196	KLHL21	-	FALSE
chr1	10518591	A	T	0.00811		.	FALSE
chr1	43748051	A	G	0.00489	C1orf210	-	FALSE	L2c	SINE,Alu
chr9	132266648	A	G	0.00230	LINC00963	+	TRUE	AluSx	SINE,Alu
chr8	146016990	C	T	0.00027	RPL8	-	FALSE
chr1	16841561	G	A	0.00025		.	FALSE
chr2	217366919	A	G	0.00197		.	FALSE	AluSz6	SINE,Alu
chr1	47184569	G	C	0.00061	EFCAB14	-	FALSE
chr1	28608338	A	G	0.00341	SESN2	+	FALSE
chr12	27953266	G	T	0.00198	KLHL42	+	FALSE
chr1	120839682	A	G	0.00764	FAM72B	+	FALSE
chr1	241795525	A	G	0.00165	OPN3,CHML	-	FALSE	THE1B	SINE,Alu
chr1	16933753	G	A	0.00740	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	16891365	G	A	0.00475	NBPF1	-	FALSE
chr3	155658362	C	T	0.00807		.	FALSE	MIR3	SINE,Alu
chr1	19586458	A	G	7.27253E-05	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	87002706	G	A	0.00178	RMND5A	+	FALSE
chr1	16932536	C	T	0.00114	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr3	81698130	T	C	2.93981E-08	GBE1	-	FALSE
chr1	6583270	C	G	0.00026	NOL9	-	FALSE
chr1	117117182	C	T	0.00270	IGSF3	-	FALSE
chr12	133298428	A	G	7.41792E-11	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	36770600	G	T	0.00792	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	230975454	A	G	0.00438	C1orf198	-	FALSE
chr1	179042701	A	G	0.00132	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	10518921	C	T	0.00398		.	FALSE	AluSx3	SINE,Alu
chr1	71531596	A	G	1.07667E-05	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr2	242164677	A	G	0.00117	ANO7	+	TRUE	AluSg	SINE,Alu
chr1	44685732	T	C	9.79150E-12	DMAP1	+	FALSE
chr1	28825465	A	G	0.00756	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	179832838	A	G	0.00018	TOR1AIP2	-	FALSE	MLT1L	SINE,Alu
chr10	28971535	T	A	0.00169	BAMBI	+	FALSE
chr1	118502685	T	A	0.00333	WDR3,SPAG17	+,-	FALSE
chr1	17998	C	T	0.00194	WASH7P	-	FALSE
chr5	122165472	C	T	0.00147	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	183105705	G	A	0.00074	LAMC1	+	FALSE
chr14	21929014	T	C	0.00749	RAB2B	-	TRUE	AluSp	SINE,Alu
chr22	18572730	A	G	6.64824E-05	PEX26	+	TRUE	AluYf1	SINE,Alu
chr1	19543456	T	C	0.00011	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	201774264	T	C	0.00639		.	FALSE	AluSz	SINE,Alu
chr19	54627915	C	T	0.00015	PRPF31	+	FALSE
chr4	25236017	T	C	2.76644E-09	PI4K2B	+	FALSE
chr1	16944953	T	G	0.00158	CROCCP2	-	FALSE
chr2	69689806	T	C	0.00175	AAK1	-	TRUE	AluSg	SINE,Alu
chr1	155582104	T	A	0.00099	MSTO1	+	FALSE
chr1	182569291	A	T	0.00979	RGS16	-	FALSE
chr1	38326700	T	C	5.61462E-05	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	16529016	C	T	0.00024	ARHGEF19	-	FALSE
chr1	16890598	T	A	0.00428	NBPF1	-	FALSE
chr1	7980667	T	C	0.00584	TNFRSF9	-	TRUE	AluJb	SINE,Alu
chr1	46828657	C	T	0.00378	NSUN4	+	FALSE
chr3	105266274	T	C	4.07026E-07	ALCAM	+	FALSE
chr1	144918957	T	A	0.00484	NBPF20,PDE4DIP	+,-	FALSE
chr1	214524576	T	C	0.00060	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	46828460	C	T	0.00393	NSUN4	+	FALSE
chr3	41281407	G	T	0.00288	CTNNB1	+	FALSE
chr9	68413593	C	A	0.00342		.	FALSE
chr1	154438880	T	C	0.00170	IL6R	+	FALSE
chr12	98942808	A	G	0.00019	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	179042580	A	G	0.00995	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr2	102484487	G	T	0.00281	MAP4K4	+	FALSE
chr3	86994021	T	C	0.00705	VGLL3	-	FALSE
chr12	9848629	A	G	0.00027	CLEC2D	+	FALSE
chr1	229652587	T	C	0.00732	ABCB10	-	FALSE
chr2	174090321	C	A	0.00563	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr11	19184951	G	A	0.00066	ZDHHC13	+	FALSE
chr5	25415881	T	C	0.00911		.	FALSE
chr1	28826085	A	G	0.00212	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr5	95130804	C	T	0.00792	RHOBTB3	+	FALSE	AluSz	SINE,Alu
chr1	16889639	T	C	0.00350	NBPF1	-	TRUE
chr5	130540369	C	A	0.00196	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr1	180169330	C	T	0.00015	FLJ23867	+	FALSE	MIR	SINE,Alu
chr2	101622884	C	A	0.00387	RPL31	+	FALSE
chr6	74133914	T	C	0.00014		.	FALSE	AluY	SINE,Alu
chr3	10302172	G	A	0.00202	TATDN2	+	FALSE
chr1	15993713	A	T	7.45571E-05		.	FALSE	AluSx4	SINE,Alu
chr5	37290492	T	C	8.25709E-07		.	FALSE	AluSz	SINE,Alu
chr1	10519888	T	C	0.00878		.	FALSE	AluJr	SINE,Alu
chr1	24022910	G	A	0.00702	RPL11	+	FALSE
chr1	161559466	C	A	0.00491	FCGR2C	+	FALSE
chr14	74388908	T	C	0.00835	ZNF410	+	FALSE
chr5	40715440	A	C	0.00646	TTC33	-	FALSE
chr1	145511998	A	G	0.00715	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	52882970	A	G	0.00533	PRPF38A	+	FALSE
chr1	205687351	T	C	2.02150E-05	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	20977599	C	G	0.00489	PINK1,PINK1-AS	+,-	FALSE
chr1	38174583	A	C	0.00644	CDCA8	+	FALSE
chr1	160965379	T	C	0.00081	F11R	-	TRUE	AluSc	SINE,Alu
chr2	101622700	A	G	0.00387	RPL31	+	FALSE
chr1	205056476	T	C	0.00096	RBBP5	-	FALSE	AluSx	SINE,Alu
chr1	120839681	C	A	0.00125	FAM72B	+	FALSE
chr1	202993198	C	A	0.00754	TMEM183A	+	FALSE
chr1	100731820	G	A	0.00771	RTCA	+	FALSE
chr1	38326547	C	T	0.00212	INPP5B	-	FALSE	AluJr	SINE,Alu
chr5	151041877	C	A	1.29615E-05	SPARC	-	FALSE
chr6	42856917	A	G	0.00280	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr3	194124624	C	T	0.00502	ATP13A3	-	FALSE
chr2	37334146	T	C	0.00039	EIF2AK2	-	TRUE	AluSz	SINE,Alu
chr12	98943103	A	G	0.00306	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	224380498	A	G	6.58460E-05	DEGS1	+	TRUE	AluSx	SINE,Alu
chr14	31916770	T	C	0.00153	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	26801731	G	T	0.00325	HMGN2	+	FALSE	(T)n	SINE,Alu
chr3	9517369	C	T	0.00395	SETD5	+	FALSE
chr1	145512078	A	G	0.00099	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	19542250	T	C	0.00859	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr7	44917351	T	C	0.00338	PURB	-	TRUE	AluSz	SINE,Alu
chr1	109181304	C	A	0.00592	FAM102B	+	FALSE
chr2	26612465	G	A	0.00270	EPT1	+	FALSE
chr3	12613866	T	C	0.00043	MKRN2	+	FALSE
chr1	93827764	A	G	0.00056	DR1	+	FALSE
chr1	10517635	T	C	0.00553		.	FALSE	AluSx1	SINE,Alu
chr1	67874696	T	C	0.00420	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr9	136209398	G	A	0.00150	MED22	-	FALSE
chr1	86118417	T	G	0.00653	ZNHIT6	-	FALSE
chr1	145293469	G	C	0.00888	NBPF20,NBPF10	+	FALSE
chr16	84778690	C	T	0.00799	USP10	+	FALSE
chr6	42094498	T	C	0.00931	C6orf132	-	TRUE	AluSq2	SINE,Alu
chr1	1345002	A	G	0.00141		.	FALSE	AluSg	SINE,Alu
chr17	38788606	G	T	1.11022E-15	SMARCE1	-	FALSE
chr12	66546100	A	G	0.00849	TMBIM4	-	FALSE
chr7	25161424	T	C	0.00669	CYCS	-	TRUE	AluSz6	SINE,Alu
chr14	74526945	T	C	2.53258E-07	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr1	20976759	C	T	2.31016E-05	PINK1,PINK1-AS	+,-	FALSE
chr1	29508350	C	T	0.00859	SRSF4	-	FALSE	(GGC)n	SINE,Alu
chr1	153617980	A	G	0.00272	CHTOP	+	FALSE
chr12	98942824	A	G	2.17067E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	148251952	C	A	0.00905	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	202992954	T	C	0.00042	TMEM183A	+	FALSE
chr1	45244413	T	A	0.00750		.	FALSE
chr6	150047376	T	C	0.00102	NUP43	-	TRUE	AluSc	SINE,Alu
chr2	176790393	C	T	0.00282	LNPK	-	FALSE	AluSp	SINE,Alu
chr1	10519912	T	C	0.00750		.	FALSE	AluJr	SINE,Alu
chr1	6948076	C	T	0.00221	CAMTA1	+	FALSE	L2a	SINE,Alu
chr1	28939803	C	T	1.27013E-09	TAF12	-	FALSE
chr3	179116220	T	C	0.00343	GNB4	-	TRUE	AluSz6	SINE,Alu
chr3	14986447	T	C	2.03372E-08	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	110201699	T	C	0.00513	GSTM4	+	FALSE
chr4	53732381	C	T	0.00433	RASL11B	+	FALSE	(TTTCTTT)n	SINE,Alu
chr8	40011786	C	A	0.00196	C8orf4	+	FALSE
chr2	24224134	A	G	0.00333		.	FALSE	AluSp	SINE,Alu
chr3	10005159	A	T	0.00939	EMC3	-	FALSE	(AT)n	SINE,Alu
chr6	109001947	A	G	0.00359	FOXO3	+	FALSE	(A)n	SINE,Alu
chr3	10193743	T	C	0.00456	VHL	+	FALSE	AluJr	SINE,Alu
chr1	109474776	A	G	0.00088	GPSM2,CLCC1	+,-	FALSE	AluSz	SINE,Alu
chr1	33071159	A	G	0.00947	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	201975173	G	T	0.00053	RNPEP	+	FALSE
chr3	48787640	T	C	0.00320	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr2	37331560	T	C	6.28398E-05		.	FALSE	AluJb	SINE,Alu
chr2	176789478	T	C	0.00219	LNPK	-	TRUE	MSTB1	SINE,Alu
chr1	26603883	G	A	0.00088	CEP85	+	FALSE
chr2	217366541	A	G	0.00071		.	FALSE	AluSz	SINE,Alu
chr1	10519048	T	C	0.00728		.	FALSE	AluSx3	SINE,Alu
chr22	18571431	A	G	0.00158	PEX26	+	TRUE	AluSz	SINE,Alu
chr7	120740103	G	T	0.00601	CPED1	+	FALSE
chr1	53291435	A	G	0.00790	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr12	1086062	G	T	0.00847	RAD52	-	FALSE	L2	SINE,Alu
chr19	16661421	T	C	0.00427	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr4	13583889	T	C	2.08207E-10	BOD1L1	-	FALSE
chr3	15296358	A	T	4.17447E-06	SH3BP5,SH3BP5-AS1	+,-	FALSE
chr17	42879245	T	C	0.00834	GJC1	-	TRUE	AluSx1	SINE,Alu
chr3	88104073	G	C	0.00887	CGGBP1	-	FALSE
chr3	179117646	G	A	0.00812	GNB4	-	FALSE
chr1	150937961	A	C	0.00060	CERS2	-	FALSE	G-rich	SINE,Alu
chr5	115165591	T	C	0.00407	ATG12	-	TRUE	AluSq2	SINE,Alu
chr1	16892135	G	A	0.00221	NBPF1	-	FALSE
chr2	61386572	C	G	0.00821	C2orf74	+	FALSE	AluSz	SINE,Alu
chr1	160966376	T	C	0.00996	F11R	-	TRUE	AluSg	SINE,Alu
chr1	65297861	T	C	0.00895	RAVER2	+	FALSE
chr1	153963246	G	A	6.32081E-05	RPS27	+	FALSE
chr7	100031495	C	T	0.00475	MEPCE	+	FALSE
chr1	78483452	C	T	0.00045	DNAJB4	+	FALSE	L1MB7	SINE,Alu
chr3	98518158	A	T	1.44910E-06	DCBLD2	-	FALSE
chr1	3730400	T	C	0.00457	CEP104	-	TRUE	AluSx3	SINE,Alu
chr3	42252924	G	C	0.00079	TRAK1	+	FALSE
chr1	148251083	T	C	0.00041	NBPF8,NBPF14,NBPF9	-	FALSE	L1MC4	SINE,Alu
chr1	165877575	A	C	0.00839	UCK2	+	FALSE
chr2	47398328	G	A	0.00434	CALM2	-	FALSE
chr1	145513114	A	G	0.00026	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr7	66105163	C	G	0.00594	KCTD7	+	FALSE
chr2	204301753	T	A	0.00012	RAPH1	-	FALSE
chr1	148251079	T	C	0.00880	NBPF8,NBPF14,NBPF9	-	FALSE	L1MC4	SINE,Alu
chr1	86049362	C	A	0.00140	CYR61	+	FALSE
chr5	130537666	A	G	0.00329	LYRM7	+	TRUE	AluJb	SINE,Alu
chr2	152132130	A	G	6.12116E-05	NMI	-	FALSE
chr14	102547384	A	T	0.00403	HSP90AA1	-	FALSE
chr1	150446673	A	G	2.11627E-07	RPRD2	+	FALSE
chr1	65147002	C	T	6.62669E-07	CACHD1	+	FALSE
chr1	149819554	T	C	0.00137		.	FALSE	MLT1C2	SINE,Alu
chr16	81064629	A	G	6.04166E-07	CENPN	+	TRUE	AluSg	SINE,Alu
chr3	191115082	G	C	0.00980	CCDC50	+	FALSE
chr1	19586520	A	G	0.00305	MRTO4	+	TRUE	AluSz	SINE,Alu
chr14	75202532	A	G	1.20675E-07	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	179326296	A	G	0.00171	SOAT1	+	TRUE
chr2	201676441	G	A	0.00140	LOC101927795,BZW1	+,-	FALSE
chr7	2274221	T	C	0.00579	MRM2	-	TRUE	AluJr	SINE,Alu

RBP	PKM
Knock-Method	shRNA
RBP Family	Non-canonical_RBP
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR656DQV
Platform	HiSeq
Pubmed ID	32252787

PKM - Target Gene Network