RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	16909216	G	C	0.00232	NBPF1	-	FALSE
chr1	85785554	C	T	0.00365	DDAH1	-	FALSE
chr5	52388458	A	T	0.00152	ITGA2	+	FALSE
chr7	138740037	G	C	0.00598	ZC3HAV1	-	FALSE
chr17	55752444	C	T	0.00000	MSI2	+	FALSE
chr1	28662105	A	G	0.00846	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	205111761	A	C	0.00497	DSTYK	-	FALSE
chr1	26143698	T	A	0.00832	SEPN1	+	FALSE
chr7	91742142	C	A	0.00478	CYP51A1	-	FALSE	AluSx3	SINE,Alu
chr2	176790393	C	T	0.00282	LNPK	-	FALSE	AluSp	SINE,Alu
chr3	181430334	G	A	0.00305	SOX2-OT,SOX2	+	FALSE
chr4	3514539	G	A	6.66134E-16	LRPAP1	-	FALSE
chr3	184429718	A	G	0.00914	MAGEF1	-	FALSE
chr5	154194457	A	C	0.00466	LARP1	+	FALSE
chr2	174828621	A	C	0.00315	SP3	-	FALSE
chr1	38423181	T	G	0.00793	SF3A3	-	FALSE	AluJo	SINE,Alu
chr4	68483513	G	A	3.54156E-05	UBA6	-	FALSE
chr1	113243096	G	T	0.00114	MOV10	+	FALSE
chr1	33071159	A	G	0.00947	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	182353198	A	T	0.00473	GLUL	-	FALSE
chr2	61277443	A	G	0.00362	PEX13	+	TRUE	AluSx	SINE,Alu
chr1	45280109	A	G	0.00591		.	FALSE	AluYk3	SINE,Alu
chr1	242012149	C	T	0.00334	EXO1	+	FALSE
chr1	182356399	A	G	0.00740	GLUL	-	FALSE
chr1	27678712	A	G	0.00938	SYTL1	+	TRUE	AluSx1	SINE,Alu
chr2	29023117	A	T	0.00805	PPP1CB	+	FALSE
chr1	144852203	T	G	0.00029	NBPF20,PDE4DIP	+,-	FALSE
chr3	156258319	T	C	0.00012	SSR3	-	TRUE	AluYk3	SINE,Alu
chr4	7060959	T	C	0.00832	GRPEL1	-	FALSE
chr1	44818525	T	C	0.00235	ERI3	-	FALSE
chr2	176042865	G	T	0.00887	ATP5G3	-	FALSE
chr5	17276088	C	A	0.00171	BASP1	+	FALSE	(TC)n	SINE,Alu
chr3	196658640	C	T	0.00444	SENP5	+	FALSE
chr1	36068295	T	C	7.99343E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	16112795	A	G	4.56234E-06	FBLIM1	+	FALSE
chr1	116943511	T	C	0.00236	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr3	99515750	A	G	0.00216	MIR548G	-	FALSE
chr16	15023271	G	A	0.00403		.	FALSE
chr1	114515717	G	A	0.00018	HIPK1	+	FALSE
chr1	120839682	A	G	0.00073	FAM72B	+	FALSE
chr3	14986447	T	C	2.03372E-08	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr3	33185036	G	A	0.00573	CRTAP	+	FALSE	L2a	SINE,Alu
chr1	145511991	A	G	0.00673	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	27202789	T	C	0.00026		.	FALSE	AluSq2	SINE,Alu
chr3	15114398	T	C	0.00758	RBSN	-	TRUE	AluY	SINE,Alu
chr1	183187603	C	T	0.00357	LAMC2	+	FALSE
chr19	16661421	T	C	0.00427	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr4	2931174	T	C	0.00211	ADD1	+	FALSE
chr20	25428724	A	G	0.00789	GINS1	+	TRUE	AluJb	SINE,Alu
chr6	160526548	C	A	0.00086	IGF2R	+	FALSE
chr1	21810022	A	T	0.00218	NBPF3	+	FALSE
chr9	132573290	C	T	0.00881	TOR1B	+	FALSE
chr2	37076498	A	C	0.00797	STRN	-	FALSE
chr2	85776621	T	C	0.00194	GGCX	-	TRUE	AluSz6	SINE,Alu
chr4	142945451	T	C	0.00585		.	FALSE
chr10	102315864	T	A	0.00290		.	FALSE
chr2	207027628	A	G	2.96026E-05	EEF1B2	+	FALSE
chr5	114541533	T	C	0.00957		.	FALSE	L1ME3A	SINE,Alu
chr2	191745653	T	G	0.00030	GLS	+	FALSE
chr1	163288931	G	A	0.00284	RGS5	-	FALSE	MamRep1527	SINE,Alu
chr2	96934504	T	C	0.00021	CIAO1	+	FALSE
chr6	13788200	T	C	0.00879	MCUR1	-	TRUE	AluSx	SINE,Alu
chr12	51325280	A	G	0.00370	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr5	34906587	T	C	0.00442	RAD1	-	TRUE	AluJo	SINE,Alu
chr2	85776590	T	C	0.00950	GGCX	-	TRUE	AluSz6	SINE,Alu
chr2	23926233	C	T	0.00907	KLHL29	+	FALSE
chr9	128001436	C	T	0.00052	HSPA5	-	FALSE
chr3	17200677	T	G	0.00371	TBC1D5	-	FALSE
chr14	50792787	A	G	0.00278	ATP5S	+	TRUE	AluSx	SINE,Alu
chr13	20246634	T	G	0.00071	MPHOSPH8	+	FALSE
chr2	20401859	A	T	0.00930	SDC1	-	FALSE	(A)n	SINE,Alu
chr7	100271437	C	A	0.00026	GNB2	+	FALSE
chr1	38326728	T	C	0.00079	INPP5B	-	TRUE	AluJr	SINE,Alu
chr2	206987229	T	C	0.00743		.	FALSE	AluSx	SINE,Alu
chr2	37333924	T	C	0.00298	EIF2AK2	-	FALSE	AluSz	SINE,Alu
chr1	8045340	C	A	0.00059	PARK7	+	FALSE
chr1	16907328	G	T	0.00973	NBPF1	-	FALSE
chr7	94060361	C	T	2.02320E-06	COL1A2	+	FALSE
chr4	57326875	A	G	0.00456	PAICS	+	TRUE	AluSx1	SINE,Alu
chr17	5288083	T	A	0.00232	RABEP1	+	FALSE
chr19	59095456	A	G	0.00125	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr1	16893686	G	C	0.00138	NBPF1	-	FALSE
chr1	33147947	A	G	0.00345	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr1	67874689	T	C	0.00896	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	100083425	G	A	0.00717	TOMM70	-	FALSE	FAM	SINE,Alu
chr2	29170763	G	A	5.21672E-05	WDR43	+	FALSE
chrX	123046695	A	G	0.00054	XIAP	+	TRUE	AluSz	SINE,Alu
chr2	61316542	A	G	0.00033	KIAA1841	+	TRUE	AluSx1	SINE,Alu
chr1	16929327	C	T	5.08143E-05	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	85785548	C	T	0.00350	DDAH1	-	FALSE
chr6	29911284	T	C	0.00019		.	FALSE
chr1	16932931	C	A	0.00191	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr2	173462230	G	T	0.00100	PDK1	+	FALSE	MIRc	SINE,Alu
chr1	53291382	A	G	0.00132	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	15990929	C	A	0.00202		.	FALSE	AluSx3	SINE,Alu
chr1	145281543	C	T	0.00028	NBPF20,NOTCH2NL	+	FALSE
chr7	29962666	T	A	0.00077	SCRN1	-	FALSE
chr1	17313654	C	T	0.00714	ATP13A2	-	FALSE
chr17	5288081	C	T	0.00518	RABEP1	+	FALSE
chr17	45195951	T	C	0.00011	CDC27	-	TRUE	MADE1	SINE,Alu
chr1	93616202	T	C	0.00055	TMED5	-	FALSE
chr1	79110518	A	G	0.00997	IFI44L	+	FALSE
chr3	152883475	A	T	0.00384	RAP2B	+	FALSE
chr1	19585917	T	A	0.00308	MRTO4	+	FALSE	AluJr	SINE,Alu
chr4	39552070	T	C	0.00068	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	21766776	G	C	0.00343	NBPF3	+	FALSE
chr1	155230131	C	T	0.00829	SCAMP3	-	FALSE
chr1	146033660	C	A	0.00091	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr3	16357708	A	G	0.00098	RFTN1	-	FALSE
chr2	23865260	T	C	0.00262	KLHL29	+	FALSE
chr1	76252687	T	C	0.00021	RABGGTB	+	FALSE
chr15	85184816	T	C	3.05793E-06	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr16	10625266	T	C	0.00587	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	10521238	T	C	0.00797	DFFA	-	TRUE	AluY	SINE,Alu
chr1	180063334	G	A	2.71425E-05	CEP350	+	FALSE
chr1	214524129	T	C	0.00052	PTPN14	-	TRUE	AluSx	SINE,Alu
chr3	98307696	T	G	3.25383E-09	CPOX	-	FALSE
chr1	168218573	A	G	0.00202		.	FALSE	AluSz	SINE,Alu
chrX	123046290	A	G	0.00524	XIAP	+	TRUE	AluJb	SINE,Alu
chr2	217366821	A	G	0.00510		.	FALSE	AluSz6	SINE,Alu
chr15	90820095	A	G	6.27827E-07		.	FALSE	AluY	SINE,Alu
chr6	158613395	C	A	0.00031	GTF2H5	+	FALSE
chr7	64441627	G	A	0.00478	ZNF117	-	FALSE
chr1	16929056	C	T	0.00398	NBPF1	-	FALSE
chr1	16918783	C	T	0.00252	NBPF1	-	FALSE
chr1	45280099	A	G	0.00286		.	FALSE	AluYk3	SINE,Alu
chr3	107526033	T	A	0.00056	BBX	+	FALSE
chr5	137354051	C	T	0.00098	FAM13B	-	FALSE
chr1	92977228	T	C	0.00206	EVI5	-	TRUE	AluJr	SINE,Alu
chr17	57281098	A	G	0.00181	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	145513114	A	G	6.80046E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	113672634	A	G	0.00967		.	FALSE	AluJb	SINE,Alu
chr1	117945049	G	A	0.00120	MAN1A2	+	FALSE
chr3	53265766	C	T	0.00088	TKT	-	FALSE
chr5	149363214	A	G	6.58903E-07	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr1	144932200	G	T	0.00492	NBPF20,PDE4DIP	+,-	FALSE
chr17	73703945	C	T	0.00242	SAP30BP	+	FALSE	MIRc	SINE,Alu
chr9	132266648	A	G	0.00230	LINC00963	+	TRUE	AluSx	SINE,Alu
chr5	37290336	T	C	0.00036		.	FALSE	AluSz	SINE,Alu
chrX	2824933	T	C	0.00066	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	19585772	G	A	0.00576	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr2	37327590	T	C	0.00681		.	FALSE
chr14	23441380	T	C	0.00102	AJUBA	-	TRUE	Eutr2	SINE,Alu
chr3	10192811	A	G	0.00149	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	3545185	C	A	0.00347	TPRG1L	+	FALSE
chr1	144607387	G	C	0.00016	NBPF20	+	FALSE
chr6	42856029	A	G	0.00099	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	36787880	C	T	0.00023	EVA1B	-	FALSE
chr1	109475569	A	G	0.00046	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr5	149013587	G	A	0.00102	ARHGEF37	+	FALSE	L2d	SINE,Alu
chr12	1611798	C	T	0.00338	LINC00942	+	FALSE
chr1	179829584	T	C	0.00204	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	202993614	G	T	0.00990	TMEM183A	+	FALSE	(T)n	SINE,Alu
chr1	142803764	C	T	1.49403E-06		.	FALSE	MIRb	SINE,Alu
chr1	155142927	A	G	0.00877	KRTCAP2	-	FALSE
chr1	67874689	T	C	0.00053	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	22854702	C	T	4.66415E-11	ZBTB40	+	FALSE
chr5	32586597	G	C	0.00970	SUB1	+	FALSE
chr1	1593828	G	C	0.00348	CDK11B,SLC35E2B	-	FALSE
chr16	75479891	T	C	9.48885E-06	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	6583701	T	C	0.00029	NOL9	-	FALSE
chr1	241795525	A	G	0.00165	OPN3,CHML	-	FALSE	THE1B	SINE,Alu
chr1	145290818	C	G	0.00931	NBPF20	+	FALSE
chr1	153507176	C	T	0.00957	S100A6	-	FALSE
chr7	20177664	T	C	0.00089	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr2	121979980	G	A	0.00525	TFCP2L1	-	FALSE	L1MB8	SINE,Alu
chr1	10519982	T	C	6.11297E-05		.	FALSE	AluJr	SINE,Alu
chr3	195415493	C	T	0.00126	LINC00969,SDHAP2	+	FALSE	L1ME2	SINE,Alu
chr1	109746601	A	G	0.00024	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr2	132049915	A	G	0.00226	LOC440910	+	FALSE	AluSg4	SINE,Alu
chr1	179042300	C	A	0.00491	FAM20B	+	FALSE
chr4	39528976	C	T	8.52335E-05	UGDH	-	FALSE
chr1	162752670	G	A	0.00594		.	FALSE
chr1	180167090	C	T	0.00607	QSOX1	+	FALSE
chr1	11187199	G	T	0.00047	MTOR	-	FALSE
chr1	206516261	C	T	0.00020	SRGAP2	+	FALSE
chr1	1431295	T	C	3.55878E-05	ATAD3B	+	FALSE
chr4	128756704	A	G	0.00271		.	FALSE	AluSx	SINE,Alu
chr12	124146094	A	G	2.86040E-06	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr1	45244053	A	G	0.00562	RPS8	+	FALSE
chr1	19586532	A	G	0.00166	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	37331277	T	C	0.00366		.	FALSE	AluSx1	SINE,Alu
chr2	24224134	A	G	9.70565E-06		.	FALSE	AluSp	SINE,Alu
chr2	44114074	G	A	0.00246	LRPPRC	-	FALSE	AluSz6	SINE,Alu
chr9	130268408	T	C	6.51633E-05	FAM129B	-	FALSE	(CTCA)n	SINE,Alu
chr2	61152521	G	A	0.00134	REL	+	FALSE
chr2	110373938	T	G	0.00413	SOWAHC	+	FALSE	(GAAT)n	SINE,Alu
chr1	109535088	G	A	0.00353	WDR47	-	FALSE
chr1	148003749	T	C	0.00114	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr1	214527252	G	A	0.00181	PTPN14	-	FALSE	MADE2	SINE,Alu
chr1	16893813	A	G	0.00255	NBPF1	-	FALSE
chr2	87820785	C	T	0.00110	LINC00152	+	FALSE
chr1	144521099	A	G	0.00682	NBPF20	+	FALSE
chr5	118175182	T	C	0.00205	DTWD2	-	TRUE	AluJr	SINE,Alu
chr9	136335345	G	A	0.00490	CACFD1	+	FALSE	(TG)n	SINE,Alu
chr6	71298816	A	T	0.00287		.	FALSE
chr3	73116347	T	A	0.00109	PPP4R2	+	FALSE
chr9	132266644	A	G	0.00081	LINC00963	+	TRUE	AluSx	SINE,Alu
chr15	33064742	C	G	0.00215	FMN1	-	FALSE
chr1	145291217	C	T	0.00075	NBPF20	+	FALSE
chr12	69237507	A	G	0.00889	MDM2	+	TRUE
chr2	97494866	C	T	0.00069	CNNM3	+	FALSE
chr17	55761035	G	A	0.00125	MSI2	+	FALSE
chr8	48889705	A	G	0.00339	MCM4	+	TRUE	AluSx3	SINE,Alu
chr3	192515510	G	T	0.00559	MB21D2	-	FALSE
chr4	39551167	T	C	0.00361	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr12	69237057	A	G	0.00259	MDM2	+	TRUE
chr1	15993013	G	A	1.16652E-10		.	FALSE
chr1	16945570	A	G	0.00251	CROCCP2	-	FALSE
chr1	3545192	C	G	0.00600	TPRG1L	+	FALSE
chr3	88101339	T	C	0.00531	CGGBP1	-	FALSE
chr1	31902343	T	C	1.48709E-05	SERINC2	+	FALSE
chr3	12624321	A	G	2.86985E-06	MKRN2	+	FALSE
chr1	16112795	A	G	3.02097E-05	FBLIM1	+	FALSE
chr2	128602366	T	C	0.00236		.	FALSE	AluSq2	SINE,Alu
chr5	125961447	A	G	0.00025	PHAX	+	TRUE	AluSz6	SINE,Alu
chr3	5026729	C	T	0.00539	BHLHE40	+	FALSE
chr4	2940098	T	C	0.00034	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr17	7124772	G	A	0.00175	ACADVL	+	FALSE
chr19	53914395	A	G	0.00227	ZNF765	+	TRUE	AluSx	SINE,Alu
chr1	165877671	T	C	0.00376	UCK2	+	FALSE	(T)n	SINE,Alu
chr1	46032311	A	G	0.00043	AKR1A1	+	FALSE
chr5	6633042	C	T	0.00377	NSUN2	-	FALSE
chr4	120982045	T	C	0.00293	MAD2L1	-	FALSE
chr1	144619903	T	A	0.00712	NBPF20,NBPF9	+	FALSE
chr1	60340527	G	A	0.00027	HOOK1	+	FALSE
chr12	72096330	A	G	0.00014	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr1	87213175	A	T	0.00082	SH3GLB1	+	FALSE
chr1	155161702	G	C	0.00020	MUC1	-	FALSE
chr3	63997896	G	A	0.00301	PSMD6-AS2,PSMD6	+,-	FALSE
chr1	85785550	C	A	0.00134	DDAH1	-	FALSE
chr5	130540369	C	A	0.00126	LYRM7	+	FALSE	Tigger4a	SINE,Alu
chr3	81698130	T	C	2.93981E-08	GBE1	-	FALSE
chr2	20401856	T	G	0.00263	SDC1	-	FALSE
chr1	180144485	G	A	0.00665	QSOX1	+	FALSE
chr1	78142856	T	C	0.00086	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr1	148004422	T	A	0.00733	NBPF8	-	FALSE
chr12	56510707	G	A	0.00056	RPL41	+	FALSE
chr2	55199563	G	T	0.00172	RTN4	-	FALSE
chr17	26955330	A	C	0.00291	KIAA0100	-	FALSE
chr3	181430146	C	A	0.00256	SOX2-OT,SOX2	+	FALSE
chr1	65692500	T	C	0.00281	AK4	+	FALSE	(T)n	SINE,Alu
chr1	9416574	A	G	0.00144	SPSB1	+	FALSE
chr1	145323668	G	C	0.00241	NBPF20,NBPF10	+	FALSE
chr1	15844615	A	G	0.00792	CASP9	-	FALSE
chr1	114306372	A	G	0.00243	RSBN1	-	FALSE
chr1	19543353	T	C	0.00377	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	120612006	G	A	0.00602	NOTCH2	-	FALSE
chr1	114940209	G	T	5.13716E-05	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	16576295	G	A	0.00139	FBXO42	-	FALSE	A-rich	SINE,Alu
chr8	144940792	G	C	9.20360E-05	EPPK1	-	FALSE
chr1	224380498	A	G	6.58460E-05	DEGS1	+	TRUE	AluSx	SINE,Alu
chr1	40537941	A	C	0.00489	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	237064432	C	G	0.00019	MTR	+	FALSE
chr2	63272724	T	C	0.00210	EHBP1,LOC100132215	+,-	FALSE
chr7	100804430	C	T	0.00629	AP1S1	+	FALSE
chr12	124105948	C	T	0.00778	EIF2B1	-	FALSE
chr6	38140503	C	T	0.00065	BTBD9	-	FALSE
chr1	225707043	T	C	2.18813E-07	ENAH	-	FALSE
chr1	19984100	G	C	0.00037	MINOS1-NBL1,NBL1	+	FALSE
chr1	148556784	G	A	0.00543		.	FALSE
chrX	24095325	A	G	7.48023E-10	EIF2S3	+	TRUE	AluSx	SINE,Alu
chr1	6283273	T	C	0.00109	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	236702210	A	G	0.00153	LGALS8	+	FALSE
chr1	1252652	T	C	0.00219	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr8	48890247	A	G	2.58682E-14	MCM4	+	TRUE	AluJb	SINE,Alu
chr2	230629138	C	T	0.00958	TRIP12	-	FALSE
chr2	24223159	A	G	0.00717	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr9	117050998	G	A	0.00326	COL27A1	+	FALSE
chr2	206986291	T	C	0.00143		.	FALSE	AluSz	SINE,Alu
chr4	17803026	T	C	0.00396	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	36068364	T	C	0.00013	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	28662254	A	G	0.00052	MED18	+	TRUE	AluSq2	SINE,Alu
chr9	111781015	A	C	0.00853	TMEM245	-	FALSE
chr2	37329238	T	C	0.00754		.	FALSE	AluJr4	SINE,Alu
chr2	99812843	A	G	0.00966	MRPL30	+	TRUE	AluJb	SINE,Alu
chr4	17804872	T	C	0.00096	DCAF16	-	TRUE	AluSx	SINE,Alu
chr19	39433140	G	T	0.00260	FBXO17	-	FALSE	AluJb	SINE,Alu
chr1	182568729	C	G	0.00012	RGS16	-	FALSE
chr1	145368837	C	A	4.93702E-07	NBPF20,NBPF10	+	FALSE
chr19	200571	T	C	0.00079	LINC01002	-	FALSE
chr1	225683161	T	G	0.00168	ENAH	-	FALSE	(T)n	SINE,Alu
chr1	109242607	G	A	0.00652	PRPF38B	+	FALSE
chr1	145509493	A	G	0.00264	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr2	46524711	C	T	0.00513	EPAS1	+	FALSE
chr1	2336210	C	T	0.00175	RER1	+	FALSE
chr2	99812817	A	G	0.00018	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	36068369	T	C	0.00511	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	109812555	A	C	3.87556E-05	CELSR2	+	FALSE
chr21	40567667	A	G	0.00658	BRWD1	-	FALSE
chr4	109551185	G	A	0.00344	RPL34	+	FALSE
chr3	48632596	A	G	0.00666		.	FALSE
chr1	115313039	A	G	0.00895	SIKE1	-	FALSE
chr1	11298093	C	T	1.54321E-14	MTOR	-	FALSE
chr3	46623292	T	C	0.00408	TDGF1	+	FALSE	AluSx3	SINE,Alu
chr5	170837892	C	A	0.00725		.	FALSE
chr4	2070260	G	A	0.00724	NAT8L	+	FALSE	(TG)n	SINE,Alu
chr1	62380298	G	A	0.00025	PATJ	+	FALSE
chr1	145512950	A	G	2.03454E-08	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr2	201774279	T	C	9.55391E-05		.	FALSE	AluSz	SINE,Alu
chr10	22824831	C	T	0.00702	PIP4K2A	-	FALSE
chr3	189675266	G	T	0.00781	P3H2	-	FALSE	(TG)n	SINE,Alu
chr21	34730108	A	G	0.00680	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr2	152314385	G	A	0.00040	RIF1	+	FALSE
chr1	183105534	T	C	0.00424	LAMC1	+	FALSE
chr2	37330368	T	C	0.00069		.	FALSE	AluSq2	SINE,Alu
chr1	10517306	T	C	0.00022		.	FALSE	AluJr	SINE,Alu
chr1	8412989	A	G	0.00225	RERE	-	FALSE
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr3	100083426	C	T	0.00908	TOMM70	-	FALSE	FAM	SINE,Alu
chr1	148003752	T	C	0.00015	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr15	50648940	C	T	0.00114	GABPB1-AS1	+	FALSE
chr1	156565045	C	A	0.00995	GPATCH4	-	FALSE
chr8	17087341	C	A	0.00197	CNOT7	-	FALSE
chr5	125961623	A	G	4.58304E-06	PHAX	+	TRUE	AluSz6	SINE,Alu
chr2	29170756	A	T	0.00573	WDR43	+	FALSE
chr8	42882287	A	G	0.00771	HOOK3	+	TRUE	AluSx1	SINE,Alu
chr1	145688665	T	A	0.00015	NBPF20,NBPF10,RNF115	+	FALSE
chr1	169768080	C	A	0.00857	C1orf112	+	FALSE
chr22	21304408	A	G	0.00967	CRKL	+	FALSE
chr1	1164179	G	A	0.00983	SDF4	-	FALSE	G-rich	SINE,Alu
chr1	26143725	A	T	0.00291	SEPN1	+	FALSE	AluSx	SINE,Alu
chr2	68402154	A	T	0.00991	PNO1	+	FALSE
chr3	15115270	G	T	0.00177	RBSN	-	FALSE
chr2	206982257	T	C	0.00023		.	FALSE	AluSg7	SINE,Alu
chr5	72801321	T	A	0.00212	BTF3	+	FALSE
chr2	188385337	C	T	0.00210	TFPI	-	FALSE	L1MC3	SINE,Alu
chr1	16889820	C	T	0.00709	NBPF1	-	FALSE
chr1	26143726	G	T	0.00556	SEPN1	+	FALSE	AluSx	SINE,Alu
chr20	43954058	G	C	0.00876	SDC4	-	FALSE
chr19	19745479	C	T	0.00175	GMIP	-	FALSE
chr12	1602602	A	G	8.31525E-05	ERC1	+	FALSE	AluSx	SINE,Alu
chr2	86251114	T	C	0.00150		.	FALSE	AluSx	SINE,Alu
chr2	3609064	G	A	0.00614	RNASEH1-AS1	+	FALSE	MER33	SINE,Alu
chr3	52237970	C	T	0.00017	ALAS1	+	FALSE
chr1	110023610	G	A	0.00636	SYPL2	+	FALSE
chr6	29910581	C	A	6.62336E-05		.	FALSE
chr3	5260057	A	T	0.00117	EDEM1	+	FALSE
chr6	33384325	G	T	0.00456		.	FALSE
chr3	75475670	A	C	0.00506	FAM86DP	-	FALSE
chr3	99517466	G	A	0.00088	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr16	19715543	T	C	0.00879		.	FALSE	AluSg	SINE,Alu
chr5	40832551	A	T	5.78892E-08	RPL37	-	FALSE
chr6	42857179	C	A	0.00492	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr8	41400022	A	G	0.00148	LOC102723729,GINS4	+,-	FALSE	AluY	SINE,Alu
chr3	45721836	A	G	0.00714	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	19953120	G	A	0.00027	MINOS1,MINOS1-NBL1	+	FALSE
chr3	195694454	C	T	0.00307	SDHAP1	-	FALSE
chr3	169492101	C	T	0.00402	MYNN	+	FALSE
chr1	148556790	T	A	0.00728		.	FALSE
chr2	85824711	G	A	0.00198	RNF181	+	FALSE
chr1	89447839	C	G	0.00589	KYAT3,RBMXL1	-	FALSE
chr1	47099235	A	C	0.00919		.	FALSE
chr13	41635235	C	T	0.00400		.	FALSE
chr6	31236900	G	A	0.00167		.	FALSE
chr17	42876398	T	C	0.00697	GJC1	-	FALSE	AluSz6	SINE,Alu
chr5	179665201	C	T	0.00037	MAPK9	-	FALSE	AluSx4	SINE,Alu
chr1	38423183	C	T	0.00210	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	46164493	T	C	0.00325	IPP	-	TRUE	AluJb	SINE,Alu
chr1	8412989	A	G	0.00190	RERE	-	FALSE
chr6	3021360	T	C	0.00321	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr2	242512736	G	C	0.00492	BOK	+	FALSE
chr1	146650091	C	A	0.00361	PDIA3P1	+	FALSE
chr1	144931581	C	G	0.00292	NBPF20,PDE4DIP	+,-	FALSE
chr1	144606963	G	T	0.00337	NBPF20	+	FALSE
chr1	36068231	T	C	0.00508	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	53679610	G	A	0.00084	CPT2	+	FALSE	AluSz	SINE,Alu
chr1	109475629	A	G	0.00310	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	9162234	T	C	0.00896		.	FALSE	AluSx	SINE,Alu
chr2	36776054	C	T	0.00117	CRIM1	+	FALSE
chrX	77083941	T	C	0.00271	MAGT1	-	TRUE	AluSz	SINE,Alu
chr13	50102992	T	C	0.00956	SETDB2-PHF11,PHF11	+	FALSE	L2a	SINE,Alu
chr17	7482325	T	A	5.04428E-06		.	FALSE
chr5	125962175	A	G	0.00020	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	93827991	A	C	0.00533	DR1	+	FALSE
chr4	17804852	T	C	0.00056	DCAF16	-	TRUE	AluSx	SINE,Alu
chr3	148748339	G	T	0.00666	HLTF	-	FALSE
chr1	43391823	C	T	0.00718	SLC2A1	-	FALSE
chr2	38971644	T	G	0.00021	SRSF7	-	FALSE
chr3	20025677	G	T	0.00116	RAB5A,PP2D1	+,-	FALSE
chr1	65898873	G	C	0.00530	LEPR,LEPROT	+	FALSE
chr12	33021934	A	G	0.00035	PKP2	-	FALSE
chr1	33145978	A	T	0.00288	SYNC,RBBP4	+,-	FALSE
chr15	52601189	C	T	0.00574	MYO5A	-	FALSE
chr15	41593268	A	G	0.00084		.	FALSE	AluSz6	SINE,Alu
chr2	37330611	T	C	0.00835		.	FALSE	AluSq2	SINE,Alu
chr17	74561213	A	G	0.00241	SNHG16	+	FALSE
chr3	196293764	G	C	0.00392	WDR53	-	FALSE
chr3	42592138	G	A	0.00056	SEC22C	-	FALSE
chr6	90346418	A	T	1.30335E-05	LYRM2	-	FALSE	AluSz	SINE,Alu
chr19	46052996	T	C	2.38036E-05	OPA3	-	TRUE	AluSz6	SINE,Alu
chr2	32447868	A	G	0.00663	SLC30A6	+	FALSE
chr1	179044100	A	G	0.00897	FAM20B	+	TRUE	AluSx	SINE,Alu
chr5	135513089	T	A	7.47633E-06	SMAD5	+	FALSE
chr3	10004768	G	A	3.85967E-05	EMC3	-	FALSE	Tigger14a	SINE,Alu
chr5	167898510	C	G	0.00013	WWC1	+	FALSE
chr5	130536842	A	G	0.00016	LYRM7	+	TRUE	AluSx4	SINE,Alu
chr1	145369556	A	G	0.00061	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr20	35467713	G	A	0.00373	SOGA1	-	FALSE
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr2	234386134	A	G	0.00196	USP40	-	FALSE
chr5	122359502	A	C	0.00707	PPIC	-	FALSE	(AC)n	SINE,Alu
chr3	186838874	G	A	0.00972	RPL39L	-	FALSE
chr17	16344882	T	G	0.00060	LRRC75A-AS1	+	FALSE	AluJb	SINE,Alu
chr1	89271574	T	C	3.83690E-05	PKN2	+	FALSE
chr1	145512078	A	G	0.00907	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr6	13788215	T	C	0.00546	MCUR1	-	TRUE	AluSx	SINE,Alu
chr2	61416403	T	G	0.00350	USP34	-	FALSE	AluSc8	SINE,Alu
chr7	64023437	A	G	0.00073	ZNF680	-	FALSE
chr2	37330487	T	C	0.00242		.	FALSE	AluSq2	SINE,Alu
chr3	49394834	G	A	0.00000	GPX1	-	FALSE
chr2	50147867	T	A	0.00896	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr1	53291420	A	G	0.00011	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	89649369	T	C	0.00333	GBP4	-	TRUE	AluJb	SINE,Alu
chr2	196602326	T	G	0.00503	SLC39A10	+	FALSE
chr15	38645589	A	C	0.00445	SPRED1	+	FALSE
chr1	16933110	T	C	0.00143	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	6697343	C	T	0.00054	DNAJC11	-	FALSE
chr1	33148736	A	G	0.00849	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr9	125866242	T	G	0.00988	RABGAP1	+	FALSE	(TG)n	SINE,Alu
chr1	19542455	T	C	0.00263	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	67874731	T	C	0.00613	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr6	134492482	A	C	0.00108	SGK1	-	FALSE
chr17	48771489	T	A	0.00101	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr1	157963370	C	G	0.00445	KIRREL	+	FALSE
chr6	42856100	A	G	0.00048	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr14	53109823	T	C	2.25911E-06	ERO1A	-	TRUE	MER53	SINE,Alu
chr2	174090630	C	A	0.00025	ZAK,MLK7-AS1	+,-	FALSE
chr3	181430144	C	T	0.00043	SOX2-OT,SOX2	+	FALSE
chr4	17804279	G	A	0.00606	DCAF16	-	FALSE	(A)n	SINE,Alu
chr1	10520258	T	C	0.00746		.	FALSE	AluSx	SINE,Alu
chr1	109475629	A	G	0.00315	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	11084345	C	T	0.00558	TARDBP	+	FALSE
chr1	16944809	G	C	9.47535E-05	CROCCP2	-	FALSE
chr6	79647408	T	G	0.00561	PHIP	-	FALSE
chr1	84373309	T	C	0.00627	TTLL7	-	FALSE
chr1	9161357	T	C	0.00739		.	FALSE	AluSx	SINE,Alu
chr1	28825427	A	G	0.00484	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr19	42375627	A	G	0.00463		.	FALSE	AluSx	SINE,Alu
chr1	176176230	G	A	0.00091	RFWD2	-	FALSE
chr10	82192266	A	G	0.00391	FAM213A	+	TRUE	AluSx1	SINE,Alu
chr1	206580231	A	G	0.00100	SRGAP2	+	FALSE
chr1	154987526	C	T	0.00218	ZBTB7B	+	FALSE
chr8	144827206	A	T	0.00196	FAM83H-AS1	+	FALSE	ERVL-B4-int	SINE,Alu
chr3	10320968	T	A	0.00237	TATDN2	+	FALSE
chr1	52498140	G	A	0.00044	TXNDC12,KTI12	-	FALSE
chr1	1650845	G	A	0.00094	CDK11B,CDK11A	-	FALSE
chr5	64964623	T	C	1.14652E-05	SGTB	-	TRUE	AluSx1	SINE,Alu
chr2	136541072	T	C	0.00496	UBXN4	+	FALSE
chr2	8996323	G	A	0.00159	MBOAT2	-	FALSE

RBP	SND1
Knock-Method	shRNA
RBP Family	SNase
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR232XRZ
Platform	HiSeq
Pubmed ID	32252787

SND1 - Target Gene Network