RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr5	40832555	A	T	0.00347	RPL37	-	FALSE
chr2	207942527	A	T	0.00107	KLF7	-	FALSE
chr1	146250905	G	C	0.00444	NBPF20,NBPF10,NBPF25P	+	FALSE
chr1	28836872	A	G	0.00019	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr14	64152516	T	C	0.00011	SGPP1	-	FALSE	(TA)n	SINE,Alu
chr1	16892135	G	A	0.00221	NBPF1	-	FALSE
chr1	23689522	G	T	0.00570	ZNF436	-	FALSE
chr2	37330527	T	C	0.00284		.	FALSE	AluSq2	SINE,Alu
chr1	176176230	G	A	0.00168	RFWD2	-	FALSE
chr7	29961939	G	T	1.47033E-05	SCRN1	-	FALSE
chr5	154194459	C	A	0.00832	LARP1	+	FALSE
chr2	8823958	G	A	0.00017	ID2	+	FALSE
chr1	203098275	T	G	0.00942	ADORA1	+	FALSE
chr3	181430334	G	A	0.00305	SOX2-OT,SOX2	+	FALSE
chr1	145282799	G	A	0.00081	NBPF20,NOTCH2NL	+	FALSE
chr1	109856391	G	C	0.00569	SORT1	-	FALSE
chr7	107789927	T	C	0.00111	NRCAM	-	FALSE
chr3	172117457	C	A	0.00037	FNDC3B	+	FALSE
chr3	195411239	A	C	5.03065E-05	SDHAP2	+	FALSE
chr1	21100753	T	C	0.00624	HP1BP3	-	TRUE	AluJr	SINE,Alu
chr7	17384818	A	G	0.00241	AHR	+	TRUE	AluSc	SINE,Alu
chr3	48787042	T	C	0.00799	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr2	26399214	G	A	0.00187	GAREM2	+	FALSE
chr1	145689601	A	G	0.00517	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	16889502	T	C	0.00516	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	6282400	T	C	0.00601	ICMT	-	TRUE	AluSz	SINE,Alu
chr9	130268407	C	G	0.00902	FAM129B	-	FALSE	(CTCA)n	SINE,Alu
chr1	9328242	A	G	0.00018	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	6282400	T	C	0.00132	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	120165038	A	G	0.00926	ZNF697	-	FALSE
chr5	149829072	G	T	0.00816	RPS14	-	FALSE
chr1	45975574	A	G	0.00299	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr2	37330507	T	C	9.86666E-05		.	FALSE	AluSq2	SINE,Alu
chr2	37328034	T	C	8.99638E-05		.	FALSE
chr17	4721376	A	G	0.00177	PLD2	+	FALSE
chr4	39551008	T	C	0.00017	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr5	68463014	G	T	0.00011	CCNB1	+	FALSE
chr5	174956492	A	C	0.00397	SFXN1	+	FALSE
chr2	86252198	T	C	0.00076	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	113672569	A	G	0.00742		.	FALSE	AluJb	SINE,Alu
chr1	19232017	T	G	0.00519	IFFO2	-	FALSE
chr1	28662199	A	G	7.40709E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	53291408	A	G	0.00931	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	10517313	T	C	0.00015		.	FALSE	AluJr	SINE,Alu
chr1	186332550	A	T	0.00328	TPR	-	FALSE
chr1	1595540	T	C	0.00048	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr5	122359499	C	A	0.00277	PPIC	-	FALSE	(AC)n	SINE,Alu
chr1	75171751	T	C	0.00563	CRYZ	-	FALSE
chr1	31905884	G	A	2.48126E-05	SERINC2	+	FALSE
chr19	7116159	G	T	0.00368	INSR	-	FALSE
chr1	45975331	A	G	0.00081	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	180855948	G	A	0.00218	XPR1	+	FALSE
chr4	128756738	A	G	0.00408		.	FALSE	AluSx	SINE,Alu
chr1	9160963	T	C	0.00130		.	FALSE	AluJb	SINE,Alu
chr1	184661932	A	G	0.00063	EDEM3	-	FALSE
chr1	210004199	C	G	0.00531	DIEXF	+	FALSE
chr20	18468404	T	C	0.00301	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr2	39212563	G	T	9.15843E-06	SOS1	-	FALSE
chr1	46076468	A	G	0.00069	NASP	+	TRUE	AluSx	SINE,Alu
chr3	184550501	A	G	0.00508	VPS8	+	FALSE
chr1	9162348	T	C	0.00023		.	FALSE	AluSx	SINE,Alu
chr1	211917176	C	T	0.00498	LPGAT1	-	FALSE
chr1	67874731	T	C	0.00145	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr15	60678712	G	A	0.00801	ANXA2	-	FALSE
chr7	44618448	A	G	0.00962	TMED4	-	FALSE	AluSq2	SINE,Alu
chr1	20976023	T	C	0.00889	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr12	9464178	G	A	0.00081	LOC642846	+	FALSE
chr1	202984020	A	T	0.00842	TMEM183A,TMEM183B	+	FALSE
chr6	109784327	T	C	2.38076E-05	MICAL1,ZBTB24	-	TRUE	AluSg	SINE,Alu
chr3	37317605	A	G	9.02711E-05	GOLGA4	+	FALSE
chr3	156259229	T	C	0.00225	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	149576483	G	A	0.00323	LINC00623,LINC00869,LOC103091866	+	FALSE
chr1	10517512	T	C	0.00498		.	FALSE	AluSx1	SINE,Alu
chr1	148241604	G	T	0.00756	NBPF8	-	FALSE	U1	SINE,Alu
chr12	98943103	A	G	0.00306	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	11188109	C	A	0.00817	MTOR	-	FALSE
chr5	52389817	T	A	0.00868	ITGA2	+	FALSE
chr3	47386059	T	C	9.15846E-06	KLHL18	+	FALSE
chr10	13320110	T	C	0.00193	PHYH	-	FALSE
chr2	37328082	T	C	0.00530		.	FALSE
chr10	61548855	G	T	0.00070	CCDC6	-	FALSE
chr1	145209366	A	G	0.00019	NBPF20,NOTCH2NL	+	FALSE
chr5	96503523	C	T	0.00072	RIOK2	-	FALSE
chr1	21100856	A	C	0.00010	HP1BP3	-	FALSE	(AC)n	SINE,Alu
chr22	18571343	A	G	0.00501	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	31905905	G	C	0.00948	SERINC2	+	FALSE
chr2	128604232	A	T	0.00652	POLR2D	-	FALSE
chr3	39137789	G	A	0.00579	WDR48	+	FALSE
chr1	46164493	T	C	0.00977	IPP	-	TRUE	AluJb	SINE,Alu
chr1	19586532	A	G	7.13982E-05	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	11323108	T	A	0.00100	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr1	10517314	T	C	0.00288		.	FALSE	AluJr	SINE,Alu
chr1	144615138	T	G	0.00196	NBPF20,NBPF9	+	FALSE
chr3	136573440	A	G	0.00038	NCK1-AS1,SLC35G2	+,-	FALSE
chr1	116609185	G	A	0.00187	SLC22A15	+	FALSE
chr1	111682307	G	C	5.71833E-05	DRAM2,CEPT1	+,-	FALSE
chr1	160966301	T	C	8.33949E-06	F11R	-	TRUE	AluSg	SINE,Alu
chr1	112170157	C	G	0.00335	RAP1A	+	FALSE	L1ME4a	SINE,Alu
chr3	197024681	T	C	0.00018	DLG1	-	FALSE
chr1	16944809	G	C	0.00072	CROCCP2	-	FALSE
chr1	67874859	T	C	0.00214	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	44423703	C	T	1.17684E-14	IPO13	+	FALSE
chr3	196082911	T	C	0.00250	UBXN7	-	FALSE
chr1	10520072	T	C	0.00529		.	FALSE	AluSx	SINE,Alu
chr5	148873854	A	G	0.00453		.	FALSE
chr3	121351287	A	G	0.00656	HCLS1	-	FALSE
chr3	195963397	G	A	0.00037		.	FALSE
chr1	53708530	T	C	9.40494E-05	LRP8	-	FALSE	(TA)n	SINE,Alu
chr3	170021210	C	A	0.00015	PRKCI	+	FALSE
chr1	9160958	T	C	3.06099E-05		.	FALSE	AluJb	SINE,Alu
chr1	36068364	T	C	9.25575E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	128602974	A	T	4.23982E-05		.	FALSE	AluSp	SINE,Alu
chr1	67874689	T	C	0.00146	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	20238572	A	T	0.00950	OTUD3	+	FALSE
chr1	117531621	A	G	0.00577	PTGFRN	+	FALSE
chr3	195393406	C	T	0.00690	SDHAP2	+	FALSE
chr5	175816760	T	A	0.00016		.	FALSE
chr1	16575726	T	C	0.00916	FBXO42	-	FALSE
chr16	10625300	T	C	0.00178	EMP2	-	TRUE	AluSx	SINE,Alu
chr1	16890630	T	G	0.00147	NBPF1	-	FALSE
chr1	9328242	A	G	5.63395E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	114443609	A	G	0.00035	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	207943285	A	G	0.00011	CD46	+	TRUE	AluSx1	SINE,Alu
chr1	38326643	T	C	0.00458	INPP5B	-	TRUE	AluJr	SINE,Alu
chr4	6644391	G	A	0.00000	MRFAP1	+	FALSE
chr2	37327702	T	C	8.81739E-07		.	FALSE
chr1	160990878	C	T	9.31086E-06	F11R	-	FALSE
chrX	77083914	T	C	3.12092E-05	MAGT1	-	TRUE	AluSz	SINE,Alu
chr4	56236480	T	A	0.00967	SRD5A3,SRD5A3-AS1	+,-	FALSE
chr4	73922981	T	C	0.00491	COX18	-	TRUE	AluSz	SINE,Alu
chr1	145513094	A	G	0.00633	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr13	38936619	G	T	0.00212	UFM1	+	FALSE
chr1	109475629	A	G	0.00744	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	10520725	T	C	0.00795	DFFA	-	TRUE	AluSc8	SINE,Alu
chr3	73117835	C	T	2.08399E-05	PPP4R2	+	FALSE
chr3	196557274	C	T	0.00285	PAK2	+	FALSE
chr6	44417835	A	G	8.27091E-07	CDC5L	+	TRUE	AluSx	SINE,Alu
chr1	12677525	G	A	0.00122	DHRS3	-	FALSE	(A)n	SINE,Alu
chr2	99812843	A	G	0.00966	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	45244414	T	A	0.00456		.	FALSE
chr1	1595048	T	C	0.00399	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	154323558	A	T	0.00011	ATP8B2	+	FALSE
chr1	16932594	T	C	0.00064	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr3	148748197	T	A	0.00026	HLTF	-	FALSE
chr1	146740502	C	G	0.00692	CHD1L	+	FALSE
chr1	20238573	T	C	0.00204	OTUD3	+	FALSE
chr2	10074384	G	A	0.00765	TAF1B	+	FALSE
chr19	59093997	A	G	0.00047	CENPBD1P1	+	TRUE	AluY	SINE,Alu
chr1	1252441	T	C	0.00602	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	16945027	T	C	0.00483	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr1	11150682	C	T	3.65592E-05	EXOSC10	-	FALSE
chr2	37330343	C	T	0.00055		.	FALSE	AluSq2	SINE,Alu
chr1	212277616	C	T	0.00248	DTL	+	FALSE
chr1	144833386	A	G	0.00325	NBPF20	+	FALSE	L1MEc	SINE,Alu
chr1	160966351	T	C	0.00034	F11R	-	TRUE	AluSg	SINE,Alu
chr1	1593857	T	C	0.00424	CDK11B,SLC35E2B	-	FALSE
chr1	10093457	C	T	0.00777	UBE4B	+	FALSE
chr1	179072966	C	T	0.00107	ABL2	-	FALSE	MIRc	SINE,Alu
chr10	79552092	C	T	0.00159	DLG5	-	FALSE
chr1	23847464	C	A	0.00895	E2F2	-	FALSE
chr5	68505909	A	G	0.00178	CENPH	+	TRUE	AluSx3	SINE,Alu
chr8	8099397	T	C	0.00975	FAM86B3P	+	FALSE
chr5	176916516	C	T	0.00093	PDLIM7	-	FALSE
chr2	50147867	T	A	0.00896	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr2	232319524	T	A	0.00245	NCL	-	FALSE
chr3	15112630	C	T	0.00017	RBSN	-	FALSE	AluSq2	SINE,Alu
chr2	39212565	T	G	0.00662	SOS1	-	FALSE
chr1	31342374	A	C	0.00446	SDC3	-	FALSE	(A)n	SINE,Alu
chr1	28661831	A	G	9.37902E-09	MED18	+	TRUE	AluSg	SINE,Alu
chr1	100731820	G	A	0.00771	RTCA	+	FALSE
chr1	112266790	C	T	0.00892	FAM212B	-	FALSE
chr1	205501469	A	G	0.00113	CDK18	+	FALSE
chr3	73112378	A	G	0.00261	PPP4R2,EBLN2	+	FALSE
chr6	42856156	A	G	0.00105	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	16893763	T	C	0.00996	NBPF1	-	FALSE
chr1	1595006	T	C	1.43617E-06	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr10	77807027	T	C	0.00089	C10orf11	+	FALSE
chr1	54636689	A	G	0.00268		.	FALSE
chr7	43665371	A	T	0.00430	STK17A,COA1	+,-	FALSE	(AG)n	SINE,Alu
chr1	87213174	T	G	0.00081	SH3GLB1	+	FALSE
chr1	146374185	C	G	0.00376	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr1	142804471	C	G	0.00555		.	FALSE	MIRb	SINE,Alu
chr1	16133978	T	C	0.00625	UQCRHL	-	FALSE
chr2	38975953	T	A	0.00432	SRSF7	-	FALSE
chr1	93827764	A	G	0.00098	DR1	+	FALSE
chr1	53289688	A	G	0.00059	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr19	53914411	A	G	8.16883E-05	ZNF765	+	TRUE	AluSx	SINE,Alu
chr2	234438139	A	G	0.00220	USP40	-	FALSE
chr1	35649749	C	A	0.00597	SFPQ	-	FALSE
chr1	71531596	A	G	1.07667E-05	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr6	74133968	T	C	0.00431		.	FALSE	AluY	SINE,Alu
chr2	232196570	A	G	0.00765	ARMC9	+	FALSE
chr22	33257176	A	G	0.00930	SYN3,TIMP3	+,-	FALSE
chr1	23636028	T	A	0.00029	HNRNPR	-	FALSE
chr1	78342729	A	G	0.00175	MIGA1	+	TRUE	FRAM	SINE,Alu
chr1	31351513	G	A	0.00265	SDC3	-	FALSE
chr1	143135240	C	T	0.00391	LOC102723769	-	FALSE
chr1	138156	G	T	0.00140	LOC729737	-	FALSE
chr1	28824041	T	A	0.00872	PHACTR4	+	FALSE	AluSx	SINE,Alu
chr15	91044385	G	T	0.00440	IQGAP1	+	FALSE
chr1	6582527	T	C	0.00139	NOL9	-	TRUE	AluSx1	SINE,Alu
chr2	207027628	A	G	0.00022	EEF1B2	+	FALSE
chr1	182543666	T	G	0.00124	RNASEL	-	FALSE
chr10	12292344	A	G	0.00434	CDC123	+	FALSE
chr1	10520099	T	C	0.00659		.	FALSE	AluSx	SINE,Alu
chr1	19934930	T	C	0.00026	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr2	217366534	A	G	0.00733		.	FALSE	AluSz	SINE,Alu
chr19	47278340	A	G	0.00449	SLC1A5	-	FALSE	(AC)n	SINE,Alu
chr1	101372409	T	C	0.00203	SLC30A7	+	FALSE
chr1	16933327	C	T	6.62916E-05	NBPF1	-	FALSE
chr2	233199107	C	T	0.00675	DIS3L2	+	FALSE
chr17	42876738	T	C	0.00481	GJC1	-	TRUE	AluSz6	SINE,Alu
chr1	6583474	T	C	0.00438	NOL9	-	TRUE	AluSq	SINE,Alu
chr5	178986978	C	G	0.00341	RUFY1	+	FALSE
chr11	65179818	C	T	0.00799	FRMD8	+	FALSE
chr1	1650801	T	C	0.00761	CDK11B,CDK11A	-	FALSE
chr1	33149508	A	G	0.00032	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	1597020	C	G	0.00021	CDK11B,SLC35E2B	-	FALSE
chr2	223807974	A	T	0.00593	ACSL3	+	FALSE
chr1	46076467	A	G	0.00475	NASP	+	TRUE	AluSx	SINE,Alu
chr5	140594467	G	A	0.00045	PCDHB13	+	FALSE
chr1	144932199	C	A	0.00584	NBPF20,PDE4DIP	+,-	FALSE
chr6	26368938	C	T	0.00121	BTN3A2	+	FALSE
chr2	191799592	A	G	0.00021	GLS	+	TRUE
chr1	87328403	A	T	0.00235	SEP15	-	FALSE
chr1	1345051	A	G	0.00816		.	FALSE	AluSg	SINE,Alu
chr1	11979809	A	C	0.00744	KIAA2013	-	FALSE
chr1	89447720	G	A	0.00029	KYAT3,RBMXL1	-	FALSE
chr16	4935146	C	T	0.00676	PPL	-	FALSE
chr16	11445552	T	C	0.00533	RMI2	+	FALSE
chr2	98089475	T	A	0.00385	LOC100506076,LOC100506123	-	FALSE
chr1	1419700	A	G	0.00464	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr3	14239845	G	A	0.00375	LSM3	+	FALSE
chr1	19542310	T	C	9.10228E-06	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	46075664	A	G	0.00537	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	3729182	T	C	0.00300	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	206566195	C	T	0.00052	SRGAP2	+	FALSE
chr1	25894469	A	T	0.00326	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr2	48025764	C	T	0.00722	MSH6	+	FALSE
chr16	48387296	A	G	0.00058	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr8	62538200	A	T	0.00552	ASPH	-	FALSE
chr2	99812450	A	G	7.07141E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr20	29631557	A	G	0.00159	FRG1BP	+	FALSE
chr1	45975269	A	G	0.00827	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr16	74656352	T	C	0.00187	RFWD3	-	TRUE	AluJb	SINE,Alu
chr1	16889633	T	C	0.00217	NBPF1	-	TRUE
chr7	79848334	G	T	0.00158	GNAI1	+	FALSE
chr14	70838268	T	C	0.00365	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr4	17803604	T	C	0.00174	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	54691906	C	G	0.00465	SSBP3	-	FALSE
chr1	156692052	T	A	0.00369	ISG20L2	-	FALSE	AluY	SINE,Alu
chr19	10795968	C	T	0.00700	ILF3	+	FALSE
chr1	31192650	T	G	0.00727	MATN1,MATN1-AS1	+,-	FALSE
chr1	38326728	T	C	0.00399	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	982994	T	C	0.00432	AGRN	+	FALSE
chr1	145282799	G	A	0.00915	NBPF20,NOTCH2NL	+	FALSE
chr2	31491690	T	C	0.00335		.	FALSE
chr1	41326886	C	G	0.00085	CITED4	-	FALSE
chr1	15904318	C	T	9.04121E-06	AGMAT	-	FALSE
chr3	101576175	T	C	0.00246	NFKBIZ	+	FALSE
chr1	16932428	C	G	0.00017	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	47767914	G	A	0.00636	STIL	-	FALSE
chr1	1459332	G	A	1.33172E-08	ATAD3A	+	FALSE
chr2	24224000	A	G	0.00464		.	FALSE	AluSp	SINE,Alu
chr1	36068281	T	C	0.00026	PSMB2	-	TRUE	AluSc	SINE,Alu
chr22	36677549	C	T	0.00040	MYH9	-	FALSE
chr17	3512398	T	C	0.00709	SHPK,TRPV1	-	TRUE	AluSx	SINE,Alu
chr2	24223159	A	G	0.00717	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	10518613	A	T	0.00819		.	FALSE	AluSx1	SINE,Alu
chr1	74672640	T	A	0.00011	FPGT-TNNI3K,FPGT	+	FALSE
chr12	98942885	A	G	1.31269E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr3	196077460	G	T	0.00416		.	FALSE
chr1	10093749	T	C	0.00521	UBE4B	+	FALSE
chr1	51822219	G	A	0.00283	EPS15	-	FALSE
chr3	17201882	C	T	0.00259	TBC1D5	-	FALSE
chr2	3609064	G	A	0.00212	RNASEH1-AS1	+	FALSE	MER33	SINE,Alu
chr1	35319119	A	T	0.00111	SMIM12	-	FALSE	L1ME4c	SINE,Alu
chr1	116947396	A	G	0.00226	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr2	216225584	G	T	0.00848	FN1	-	FALSE
chr1	210025751	G	A	4.42687E-05	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr1	204525744	A	G	0.00010	MDM4	+	TRUE	AluSz	SINE,Alu
chr6	30572804	C	T	2.81740E-06		.	FALSE
chr2	99772827	A	G	0.00108	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr1	95363041	C	T	0.00105	CNN3	-	FALSE
chr1	20519808	G	A	0.00882	UBXN10	+	FALSE
chr2	54896390	G	T	0.00110	SPTBN1	+	FALSE
chr7	6500726	A	T	0.00560	KDELR2	-	FALSE
chr15	90819579	A	G	0.00933		.	FALSE	AluSx	SINE,Alu
chr10	73994170	A	G	0.00218	ANAPC16	+	TRUE	AluJr	SINE,Alu
chr1	40539203	A	T	0.00179	PPT1	-	FALSE
chr1	16892135	G	A	0.00508	NBPF1	-	FALSE
chr1	16096934	C	T	0.00336	FBLIM1	+	FALSE
chr17	57279258	A	G	0.00095	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	78142901	T	C	0.00332	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr1	28825827	A	G	0.00097	PHACTR4	+	TRUE	AluSp	SINE,Alu
chr19	19793875	A	G	0.00198	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr3	170609385	C	T	0.00212	EIF5A2	-	FALSE
chr1	53289940	A	G	7.75582E-06	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr6	42856905	A	G	4.80826E-12	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr5	180236449	G	C	0.00011	MGAT1	-	FALSE
chr1	27204437	T	C	0.00319		.	FALSE	AluSg7	SINE,Alu
chr5	34906750	T	C	0.00527	RAD1	-	TRUE	AluJo	SINE,Alu
chr16	89627988	G	T	5.83717E-06	RPL13	+	FALSE
chr1	27180861	C	T	0.00721	ZDHHC18	+	FALSE
chr1	6282383	T	C	0.00130	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	191745653	T	G	0.00799	GLS	+	FALSE
chr1	17395521	G	A	0.00788	PADI2	-	FALSE
chr1	224380498	A	G	6.58460E-05	DEGS1	+	TRUE	AluSx	SINE,Alu
chr14	50792961	G	A	0.00547		.	FALSE	AluSx	SINE,Alu
chr1	28825419	A	G	0.00204	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	1595048	T	C	0.00495	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr6	32148031	A	G	1.10299E-06		.	FALSE
chr7	129472357	A	G	0.00287	UBE2H	-	FALSE
chr2	206981856	T	C	0.00174		.	FALSE	AluJb	SINE,Alu
chr1	173860808	A	G	0.00042		.	FALSE	FLAM_A	SINE,Alu
chr5	130538043	A	G	0.00713	LYRM7	+	TRUE	AluSp	SINE,Alu
chr3	40503554	A	C	0.00197	RPL14	+	FALSE
chr1	32687472	G	A	0.00877	TMEM234,EIF3I	+,-	FALSE
chr20	25428669	A	G	0.00023	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	230979247	G	A	0.00137	C1orf198	-	FALSE
chr7	137561084	G	A	0.00194	CREB3L2	-	FALSE	(GT)n	SINE,Alu
chr1	28930023	G	A	5.17411E-07	TAF12	-	FALSE
chr2	239970718	C	A	0.00244	HDAC4	-	FALSE	(AAAAC)n	SINE,Alu
chr4	152583924	A	T	0.00284	FAM160A1	+	FALSE
chr2	46414708	G	A	0.00173	PRKCE	+	FALSE
chr1	28662254	A	G	0.00052	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	212114663	G	A	0.00858	INTS7	-	FALSE
chr1	36535560	A	G	0.00059		.	FALSE	AluSx1	SINE,Alu
chr7	38764395	T	C	0.00139	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	12072783	C	A	0.00914	MFN2	+	FALSE
chr1	32688036	A	T	0.00265	EIF3I	+	FALSE
chr1	21810575	T	C	0.00827	NBPF3	+	FALSE
chr1	155582104	T	A	0.00099	MSTO1	+	FALSE
chr1	10517623	T	C	0.00145		.	FALSE	AluSx1	SINE,Alu
chr19	36260451	A	G	0.00854		.	FALSE	AluY	SINE,Alu
chr2	98272734	A	G	0.00996	ACTR1B	-	FALSE
chr1	35817023	G	C	0.00030	ZMYM4	+	FALSE
chr1	104097685	C	T	0.00721	RNPC3,AMY2B	+	FALSE
chr5	150578574	A	G	0.00447	CCDC69	-	FALSE
chr1	167759281	T	C	0.00923	MPZL1	+	FALSE
chr1	42925688	T	G	0.00637	PPCS	+	FALSE
chr17	78294253	A	G	0.00031	RNF213	+	TRUE	AluSp	SINE,Alu
chr1	36067752	T	C	0.00402	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	19585771	A	G	0.00029	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr1	31345785	T	A	0.00962	SDC3	-	FALSE
chr21	40567668	G	A	0.00559	BRWD1	-	FALSE
chr2	11321778	G	T	0.00402	ROCK2	-	FALSE	AluSx1	SINE,Alu
chr1	23636277	A	T	0.00295	HNRNPR	-	FALSE
chr5	125961166	A	G	0.00732	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	45975279	T	C	0.00019	MMACHC	+	FALSE	AluSg7	SINE,Alu
chr6	109786003	T	C	0.00245	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr7	193091	C	T	1.15297E-06	FAM20C	+	FALSE
chr1	15755248	C	T	0.00405	EFHD2	+	FALSE
chr1	146650363	T	A	0.00982	PDIA3P1	+	FALSE
chr1	193055149	A	G	0.00589	TROVE2	+	FALSE
chr8	30536078	T	C	5.73232E-10	GSR	-	FALSE	AluJr	SINE,Alu
chr1	36068231	T	C	0.00582	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	179720333	A	G	0.00308		.	FALSE
chr2	99772827	A	G	0.00377	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr7	36447346	G	A	0.00419	ANLN	+	FALSE
chr3	52109841	T	C	7.35943E-05	POC1A	-	FALSE
chr2	191065246	T	A	0.00594	C2orf88	+	FALSE
chr1	41088377	C	T	2.57179E-08	RIMS3	-	FALSE
chr1	46075612	A	G	0.00153	NASP	+	TRUE	AluSx4	SINE,Alu
chr7	6501829	T	A	0.00081	KDELR2	-	FALSE
chr1	36067677	T	C	0.00048	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	125961487	A	G	0.00776	PHAX	+	FALSE	AluSz6	SINE,Alu
chr1	22161275	G	A	0.00600	HSPG2	-	FALSE
chr2	232319593	A	C	0.00348	NCL	-	FALSE	A-rich	SINE,Alu
chr1	145511962	A	G	0.00187	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	9161137	T	C	0.00087		.	FALSE	AluSx	SINE,Alu
chr5	115428334	G	T	0.00265	COMMD10	+	FALSE
chr11	125452298	A	G	0.00583	EI24,STT3A-AS1	+,-	FALSE
chr1	20977748	T	G	0.00474	PINK1,PINK1-AS	+,-	FALSE
chr1	87200770	C	T	0.00623	SH3GLB1	+	FALSE
chr1	27434251	G	A	0.00504	SLC9A1	-	FALSE
chr1	79003523	C	G	0.00036	PTGFR	+	FALSE
chr1	19586519	A	G	0.00015	MRTO4	+	TRUE	AluSz	SINE,Alu
chr4	39551018	T	C	0.00224	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr2	128620438	C	A	0.00230	AMMECR1L	-	FALSE
chr3	98531342	A	G	0.00607	DCBLD2	-	FALSE
chr1	89525966	T	C	0.00039	GBP1	-	FALSE
chr7	44841931	A	G	0.00054	PPIA	+	TRUE	AluSx	SINE,Alu
chr2	37334139	T	C	0.00146	EIF2AK2	-	TRUE	AluSz	SINE,Alu
chr14	74524774	T	C	0.00906	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr1	46117185	C	T	0.00714	GPBP1L1	-	FALSE
chr11	133689	G	A	0.00856		.	FALSE	AluJb	SINE,Alu
chr1	162497738	G	C	0.00390	UHMK1	+	FALSE
chr15	41590287	A	G	0.00568	OIP5-AS1	+	FALSE
chr2	71298486	T	C	0.00408	NAGK	+	FALSE
chr10	65380587	A	G	0.00344	REEP3	+	FALSE
chr1	68624878	C	T	0.00465	GNG12-AS1,WLS	+,-	FALSE
chr1	144606963	G	T	0.00080	NBPF20	+	FALSE
chr1	788840	T	C	0.00415	LINC01128	+	FALSE
chr2	136542427	T	A	0.00075	UBXN4	+	FALSE	L1ME4b	SINE,Alu
chr5	140240514	A	G	0.00151	PCDHA1,PCDHA2,PCDHA3,PCDHA4,PCDHA5,PCDHA6,PCDHA7,PCDHA8,PCDHA9,PCDHA10	+	FALSE	AluY	SINE,Alu
chr1	24746451	A	G	0.00683	NIPAL3	+	TRUE	AluSc	SINE,Alu
chr5	134670071	A	T	0.00405	C5orf66,H2AFY	+,-	FALSE
chr2	217366499	A	G	0.00063		.	FALSE	AluSz	SINE,Alu
chr1	179044180	A	G	0.00416	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	204521580	A	G	0.00469	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	1431295	T	C	0.00400	ATAD3B	+	FALSE
chr1	100361925	G	A	0.00181	AGL	+	FALSE
chr1	24086807	T	C	0.00352	TCEB3	+	FALSE	(T)n	SINE,Alu
chr18	47014856	T	A	0.00722	RPL17-C18orf32,RPL17	-	FALSE
chr1	179044110	A	G	5.39593E-06	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	53359181	A	G	0.00699	ZYG11A	+	TRUE	AluSx	SINE,Alu
chr4	68587786	G	T	0.00658	UBA6-AS1	+	FALSE	MER41B	SINE,Alu
chr11	32625925	A	G	0.00845	CCDC73	-	FALSE	AluJb	SINE,Alu
chr17	74556011	A	G	0.00819	SNHG16	+	TRUE	AluSq2	SINE,Alu
chr1	87811249	T	A	0.00653	LMO4	+	FALSE
chr1	19543456	T	C	0.00386	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	109239335	G	T	0.00011	PRPF38B	+	FALSE
chr8	23087535	A	G	0.00491	LOC389641	+	FALSE	AluSx1	SINE,Alu
chr3	52288956	A	T	0.00042	WDR82	-	FALSE
chr1	46075709	A	G	0.00431	NASP	+	TRUE	AluSx4	SINE,Alu
chr21	34728099	A	G	1.57787E-05	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr1	9161218	T	C	0.00641		.	FALSE	AluSx	SINE,Alu
chr3	119212009	G	A	0.00241	POGLUT1	+	FALSE
chr1	24999463	G	T	0.00012	SRRM1	+	FALSE	(T)n	SINE,Alu
chr1	153963246	G	A	6.32081E-05	RPS27	+	FALSE
chr1	16921146	T	C	0.00835	NBPF1	-	FALSE
chr6	47592459	A	G	0.00789	CD2AP	+	FALSE
chr12	56815652	C	T	1.92663E-05	TIMELESS	-	FALSE
chr11	65179817	T	C	0.00599	FRMD8	+	FALSE
chr1	109737090	G	A	0.00173	KIAA1324	+	FALSE
chr7	79848333	T	G	0.00322	GNAI1	+	FALSE
chr5	125961573	A	G	0.00217	PHAX	+	TRUE	AluSz6	SINE,Alu
chr5	125961210	A	G	0.00966	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	168220489	A	G	0.00319		.	FALSE	AluSz6	SINE,Alu
chr1	16912015	G	A	0.00092	NBPF1	-	FALSE

RBP	HNRNPF
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR392HSJ
Platform	HiSeq
Pubmed ID	32252787

HNRNPF - Target Gene Network