RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	16529004	A	C	3.00007E-07	ARHGEF19	-	FALSE
chr1	109746745	A	G	0.00073	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr15	66791657	G	T	0.00422	RPL4	-	FALSE
chr12	66516911	A	T	0.00067	LLPH	-	FALSE
chr1	153920564	A	G	0.00057	CRTC2	-	FALSE
chr1	14150032	C	T	0.00163	PRDM2	+	FALSE
chr5	139931622	T	A	0.00881	SRA1	-	FALSE
chr1	46774813	C	G	0.00766	UQCRH	+	FALSE
chr15	90815820	A	G	0.00171		.	FALSE	FRAM	SINE,Alu
chr2	55199563	G	T	0.00172	RTN4	-	FALSE
chr3	13670508	G	A	0.00017	FBLN2	+	FALSE
chr16	57505656	T	G	0.00107	POLR2C	+	FALSE	(GGTGGG)n	SINE,Alu
chr1	143189473	C	A	0.00626	LOC102723769	-	FALSE
chr11	111930765	T	C	0.00764	DLAT	+	FALSE
chr1	6582498	T	C	0.00403	NOL9	-	TRUE	AluSx1	SINE,Alu
chr5	172385223	T	C	0.00796	LOC100268168	-	FALSE	AluSp	SINE,Alu
chr12	109887765	T	G	0.00091	KCTD10	-	FALSE
chr21	40567668	G	A	0.00559	BRWD1	-	FALSE
chr1	10517653	T	C	0.00475		.	FALSE	AluSx1	SINE,Alu
chr2	37328034	T	C	6.77479E-07		.	FALSE
chr20	43707842	A	G	0.00100	STK4	+	TRUE	AluJb	SINE,Alu
chr3	39450156	A	G	0.00985	RPSA	+	FALSE
chr1	118420452	C	G	0.00713	GDAP2	-	FALSE
chr7	131188652	G	C	0.00684	PODXL	-	FALSE	MIR3	SINE,Alu
chr22	18571457	A	G	0.00493	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	148004422	T	A	0.00017	NBPF8	-	FALSE
chr10	124913908	C	A	0.00784	BUB3	+	FALSE
chr17	65335291	T	C	0.00113	PSMD12	-	TRUE	AluSx	SINE,Alu
chr6	13788342	T	C	0.00048	MCUR1	-	TRUE	AluSx	SINE,Alu
chr2	91843429	G	A	0.00037	LOC654342	-	FALSE
chr5	140025058	G	T	0.00392	NDUFA2	-	FALSE
chr1	24935337	A	G	0.00773	NCMAP	+	TRUE	AluJb	SINE,Alu
chr1	89447715	T	G	0.00137	KYAT3,RBMXL1	-	FALSE
chr9	33046889	T	A	0.00932	SMU1	-	FALSE	AluSz	SINE,Alu
chr17	65334846	T	C	0.00456	PSMD12	-	FALSE	AluSq	SINE,Alu
chr1	154323557	C	T	0.00018	ATP8B2	+	FALSE
chr1	179829425	T	C	1.55944E-05	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	1309464	C	T	1.11022E-16	AURKAIP1	-	FALSE
chr1	6282237	T	C	0.00372	ICMT	-	TRUE	AluSz	SINE,Alu
chr19	39433138	G	A	0.00276	FBXO17	-	FALSE	AluJb	SINE,Alu
chr1	8045341	T	A	0.00750	PARK7	+	FALSE
chr7	131241049	G	A	0.00145	PODXL	-	FALSE	(GGCGAC)n	SINE,Alu
chr3	5258431	G	A	3.44849E-09	EDEM1	+	FALSE
chr5	82877162	G	A	0.00296	VCAN	+	FALSE	(A)n	SINE,Alu
chr2	128601464	T	C	0.00161		.	FALSE	AluJr	SINE,Alu
chr5	114541533	T	C	0.00957		.	FALSE	L1ME3A	SINE,Alu
chr12	98943103	A	G	0.00528	TMPO	+	TRUE	AluSz	SINE,Alu
chr11	76733945	A	T	0.00931	ACER3	+	FALSE	A-rich	SINE,Alu
chr1	145509569	A	G	0.00777	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	179843725	T	C	0.00028	TOR1AIP2	-	TRUE	AluJb	SINE,Alu
chr3	191097966	T	C	1.34670E-13	CCDC50	+	FALSE
chr1	144829799	G	C	2.98942E-05	NBPF20,NBPF9	+	FALSE	L1MC4	SINE,Alu
chr1	145293469	G	C	0.00578	NBPF20,NBPF10	+	FALSE
chr1	16945504	C	T	0.00995	CROCCP2	-	FALSE
chr1	1018144	T	C	0.00019	C1orf159	-	FALSE
chr1	25894472	C	G	0.00594	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr5	64016339	C	T	6.96791E-06	SREK1IP1	-	FALSE
chr12	64842974	C	A	0.00925		.	FALSE	AluSz	SINE,Alu
chr16	48386442	A	G	0.00964	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr16	81420621	G	C	0.00214		.	FALSE	L3b	SINE,Alu
chr6	126661502	G	T	0.00873	CENPW	+	FALSE
chr12	133298423	A	G	2.89213E-13	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	6583036	T	C	0.00296	NOL9	-	TRUE	AluSx4	SINE,Alu
chr2	70677439	A	G	0.00498	TGFA	-	FALSE
chr1	151742798	T	C	0.00626	OAZ3	+	FALSE
chr6	42855962	A	G	0.00045	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	1344998	A	G	0.00461		.	FALSE	AluSg	SINE,Alu
chr2	86272758	G	A	0.00023	POLR1A	-	FALSE
chr19	17414126	C	T	0.00029	ABHD8	-	FALSE
chr7	44918732	T	C	0.00039	PURB	-	FALSE	AluSg	SINE,Alu
chr19	19791650	A	G	1.64958E-05	ZNF101	+	TRUE	AluSc	SINE,Alu
chr1	11083395	C	T	0.00616	TARDBP	+	FALSE
chr1	59124634	C	A	0.00322	MYSM1	-	FALSE	(AC)n	SINE,Alu
chr1	32638906	C	T	4.63739E-10	KPNA6	+	FALSE
chr3	99516879	A	T	0.00667	MIR548G	-	FALSE
chr2	206987597	T	C	0.00085		.	FALSE	AluJb	SINE,Alu
chr2	85773623	T	C	0.00203	GGCX	-	TRUE	AluSx1	SINE,Alu
chr8	30535975	T	C	5.05710E-05	GSR	-	TRUE	AluJr	SINE,Alu
chr1	145512944	A	G	0.00171	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr12	121769840	T	C	0.00499	ANAPC5	-	TRUE	AluJr	SINE,Alu
chr5	74324902	C	T	0.00574	GCNT4	-	FALSE
chr1	19545145	A	T	0.00510	LOC101927895,EMC1	+,-	FALSE
chr1	47840953	A	G	0.00404	CMPK1	+	FALSE
chr1	24286327	G	A	0.00053	PNRC2	+	FALSE
chr2	201253956	A	G	0.00071	SPATS2L	+	FALSE
chr1	10519888	T	C	0.00878		.	FALSE	AluJr	SINE,Alu
chr2	202029999	T	G	0.00350	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chr1	117645998	A	G	0.00434		.	FALSE
chr2	98409998	G	T	0.00261	TMEM131	-	FALSE
chr1	109239335	G	T	0.00011	PRPF38B	+	FALSE
chr12	27955296	C	T	3.87648E-07	KLHL42	+	FALSE
chr1	1421531	C	A	0.00467	ATAD3B	+	FALSE
chr4	124237124	A	G	0.00119	SPATA5	+	TRUE	AluJr	SINE,Alu
chr7	115898442	G	C	2.36867E-05	TES	+	FALSE	AluSx	SINE,Alu
chr4	57326156	A	G	0.00170	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	109818161	C	T	0.00864	CELSR2	+	FALSE
chr1	28662199	A	G	0.00011	MED18	+	TRUE	AluSq2	SINE,Alu
chr10	116603648	A	G	0.00267	FAM160B1	+	FALSE
chr3	5026731	C	T	0.00824	BHLHE40	+	FALSE
chr3	9833986	C	T	2.34147E-05	TADA3	-	FALSE
chr3	183889337	A	T	3.46641E-05	DVL3	+	FALSE
chr2	44115183	T	A	0.00914	LRPPRC	-	FALSE
chr18	24127008	T	G	0.00800	KCTD1	-	FALSE	(TGG)n	SINE,Alu
chr5	108714298	T	C	0.00967	PJA2	-	FALSE
chr2	38971641	T	A	0.00071	SRSF7	-	FALSE
chr1	1421531	C	A	0.00409	ATAD3B	+	FALSE
chr3	172115465	T	A	0.00170	FNDC3B	+	FALSE
chr4	103809241	A	T	0.00073	CISD2,SLC9B1	+,-	FALSE
chr1	184661942	T	G	0.00343	EDEM3	-	FALSE
chr1	53680205	C	T	4.54902E-05	C1orf123	-	FALSE
chr16	3207362	A	T	1.09222E-05		.	FALSE
chr1	19934742	G	T	8.15259E-08	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	144053567	C	T	0.00963		.	FALSE
chr1	109818161	C	T	0.00382	CELSR2	+	FALSE
chr4	2940347	T	C	0.00113	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	10520684	T	C	0.00125	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	100550370	T	A	0.00308	SASS6	-	FALSE
chr1	183486859	G	A	0.00831	SMG7	+	FALSE
chr6	42856157	A	G	0.00081	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	10521172	T	C	0.00295	DFFA	-	TRUE	AluY	SINE,Alu
chr7	28860031	A	T	0.00017	CREB5	+	FALSE
chr1	121133733	G	A	0.00467	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	36522615	A	G	0.00658		.	FALSE	AluSc	SINE,Alu
chr1	145323656	A	T	0.00593	NBPF20,NBPF10	+	FALSE
chr5	25415881	T	C	0.00911		.	FALSE
chr1	22161275	G	A	0.00600	HSPG2	-	FALSE
chr1	161160460	T	A	0.00298	ADAMTS4	-	FALSE	(CA)n	SINE,Alu
chr1	13942884	A	C	0.00016	PDPN	+	FALSE
chr1	225974581	A	G	0.00732	SRP9	+	TRUE	AluJr	SINE,Alu
chr9	128127412	A	G	0.00751		.	FALSE
chr1	10042987	A	G	0.00199	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr3	69154081	G	A	0.00999	ARL6IP5	+	FALSE
chr1	118502767	G	A	0.00624	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	27879797	C	A	0.00246	AHDC1	-	FALSE	MIRb	SINE,Alu
chr1	148577409	C	A	0.00897	NBPF15	+	FALSE
chr1	6283551	T	C	0.00324	ICMT	-	FALSE
chr1	201845903	A	G	0.00041	IPO9	+	FALSE
chr1	144932151	G	T	0.00643	NBPF20,PDE4DIP	+,-	FALSE
chr4	56236480	T	A	0.00967	SRD5A3,SRD5A3-AS1	+,-	FALSE
chr6	37138024	G	C	0.00892	PIM1	+	FALSE	(GCA)n	SINE,Alu
chr1	6582161	T	C	0.00697	NOL9	-	TRUE	AluSq4	SINE,Alu
chr1	46075720	A	G	0.00105	NASP	+	TRUE	AluSx4	SINE,Alu
chr6	3021448	T	C	0.00126	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr1	203098275	T	G	0.00942	ADORA1	+	FALSE
chr2	64687665	C	A	0.00976	LGALSL	+	FALSE
chr1	17326540	G	A	0.00120	ATP13A2	-	FALSE
chr1	78342729	A	G	0.00175	MIGA1	+	TRUE	FRAM	SINE,Alu
chr1	26856462	T	G	0.00201	RPS6KA1	+	FALSE
chr1	160967816	T	C	0.00162	F11R	-	TRUE	AluSp	SINE,Alu
chr1	8045340	C	A	0.00059	PARK7	+	FALSE
chr1	33324136	T	C	0.00739	S100PBP	+	FALSE
chr8	22995145	T	C	3.53807E-06	TNFRSF10D	-	FALSE
chr7	38764332	T	C	0.00209	VPS41	-	TRUE	AluSp	SINE,Alu
chr2	64119873	A	T	0.00492	VPS54	-	FALSE
chr1	179326315	A	G	0.00187	SOAT1	+	TRUE
chr2	191556842	T	A	0.00812	NAB1	+	FALSE
chr1	43629979	G	T	0.00470	EBNA1BP2	-	FALSE
chr1	179044239	A	G	0.00143	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	19542458	T	C	0.00113	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	145513017	A	G	0.00037	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr7	129474438	C	T	0.00034	UBE2H	-	FALSE
chr10	28971535	T	A	0.00169	BAMBI	+	FALSE
chr13	21547679	A	G	0.00233	LATS2	-	FALSE
chr1	119683390	G	A	0.00283	LOC101929147	+	FALSE
chr1	145511983	A	G	0.00596	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr5	118174745	T	C	0.00084	DTWD2	-	TRUE	AluY	SINE,Alu
chr17	65335393	T	C	4.59862E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr2	64479079	G	A	0.00452	LOC100507006	+	FALSE
chr5	43609343	C	T	0.00556	NNT	+	FALSE
chr14	23795222	T	G	0.00162	BCL2L2-PABPN1,PABPN1	+	FALSE
chr3	40353791	A	T	0.00419	EIF1B	+	FALSE
chr1	44685732	T	C	9.79150E-12	DMAP1	+	FALSE
chr15	65442483	T	C	0.00523	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	40213412	A	G	0.00235	PPIE	+	TRUE	AluSx3	SINE,Alu
chr1	214524576	T	C	0.00060	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	15899630	T	C	0.00082	AGMAT	-	TRUE	AluSq2	SINE,Alu
chr1	38326700	T	C	5.61462E-05	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	19542679	T	C	0.00575	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr5	174956494	T	A	2.51545E-05	SFXN1	+	FALSE
chr2	103333654	A	T	0.00488	MFSD9	-	FALSE	AluYm1	SINE,Alu
chr1	86118417	T	G	0.00653	ZNHIT6	-	FALSE
chr1	1595077	T	C	0.00031	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	193054576	T	C	0.00068	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr4	1205668	C	A	0.00132	CTBP1-AS,CTBP1	+,-	FALSE	(A)n	SINE,Alu
chr1	11710798	T	G	0.00328	FBXO2	-	FALSE	(CCT)n	SINE,Alu
chr1	53289688	A	G	0.00069	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr2	37327666	T	C	0.00028		.	FALSE
chr2	74333235	C	T	0.00022	TET3	+	FALSE
chr1	145291494	A	G	0.00738	NBPF20	+	FALSE	MIRb	SINE,Alu
chr1	9161245	T	C	0.00071		.	FALSE	AluSx	SINE,Alu
chrX	2824894	T	C	0.00770	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	112266787	G	T	0.00642	FAM212B	-	FALSE
chr1	16889596	T	C	0.00905	NBPF1	-	TRUE
chr1	38158705	G	A	0.00168	CDCA8	+	FALSE
chr4	38946758	G	A	0.00294	FAM114A1	+	FALSE
chr1	25812110	T	C	0.00639	TMEM57	+	FALSE
chr5	180663941	G	T	0.00166	RACK1	-	FALSE
chr5	37290323	T	C	8.21848E-08		.	FALSE	AluSz	SINE,Alu
chr1	45975269	A	G	0.00098	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr5	125961810	A	G	3.92353E-06	PHAX	+	TRUE	FLAM_C	SINE,Alu
chr2	152132130	A	G	0.00071	NMI	-	FALSE
chr7	6501831	T	A	0.00170	KDELR2	-	FALSE
chr1	19586501	A	G	0.00055	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	10517567	T	C	0.00262		.	FALSE	AluSx1	SINE,Alu
chr1	12677549	T	A	1.84464E-05	DHRS3	-	FALSE	(A)n	SINE,Alu
chr6	13788222	T	C	0.00490	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	20976075	T	C	0.00135	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr3	133538762	A	T	0.00804	SRPRB	+	FALSE
chr1	28864731	A	G	0.00477	RCC1	+	FALSE
chr2	232196570	A	G	0.00765	ARMC9	+	FALSE
chr1	10521237	T	C	0.00348	DFFA	-	TRUE	AluY	SINE,Alu
chr1	145284175	G	C	0.00481	NBPF20,NOTCH2NL	+	FALSE
chr1	3697137	G	T	0.00250	LRRC47	-	FALSE
chr1	121133779	C	G	0.00567	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	67874689	T	C	0.00146	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr2	64327544	G	T	0.00340	PELI1	-	FALSE
chr3	30735330	G	T	0.00402	TGFBR2	+	FALSE
chr2	99812398	A	G	0.00019	MRPL30	+	TRUE	AluSx	SINE,Alu
chr5	6372180	C	T	0.00034	MED10	-	FALSE
chr1	9732611	T	C	0.00321	PIK3CD,PIK3CD-AS2	+,-	FALSE	AluJo	SINE,Alu
chr1	31905886	C	A	0.00226	SERINC2	+	FALSE
chr2	76672504	A	G	2.97414E-06		.	FALSE	7SK	SINE,Alu
chrX	152916229	G	A	0.00809	DUSP9	+	FALSE
chr9	19063167	C	T	0.00539	HAUS6	-	FALSE
chr1	145282904	A	G	0.00308	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr1	90401562	C	A	0.00057	LRRC8D	+	FALSE
chr1	33149486	A	G	0.00874	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	144931392	G	A	0.00683	NBPF20,PDE4DIP	+,-	FALSE
chr6	24719384	A	C	0.00215	C6orf62	-	FALSE	(A)n	SINE,Alu
chr3	15115270	G	T	0.00177	RBSN	-	FALSE
chr1	70718280	A	C	0.00946		.	FALSE
chr10	47221465	T	C	0.00201		.	FALSE	AluJb	SINE,Alu
chr1	94351064	A	T	0.00212	GCLM	-	FALSE
chr1	78414329	G	A	0.00874	FUBP1	-	FALSE	A-rich	SINE,Alu
chr2	10567337	G	C	0.00940	HPCAL1	+	FALSE
chr5	65120054	C	T	0.00625	NLN	+	FALSE
chr12	104186946	G	T	0.00523	NT5DC3	-	FALSE
chr17	61502460	T	A	0.00161	TANC2	+	FALSE
chr15	33064461	C	T	0.00653	FMN1	-	FALSE
chr7	156762446	G	T	0.00162	NOM1	+	FALSE
chr8	26435508	C	T	0.00106	DPYSL2	+	FALSE	(TC)n	SINE,Alu
chr5	43175369	G	T	7.56035E-05	ZNF131	+	FALSE
chr1	155429590	G	T	0.00356	ASH1L	-	FALSE
chr1	3730400	T	C	0.00457	CEP104	-	TRUE	AluSx3	SINE,Alu
chr2	10179657	A	C	7.77751E-05		.	FALSE	L1ME4b	SINE,Alu
chr9	102744711	A	T	0.00675	ERP44	-	FALSE
chr10	15120275	T	C	0.00017	ACBD7	-	TRUE	L1PA7	SINE,Alu
chr1	16890130	A	C	0.00728	NBPF1	-	FALSE
chr12	133298095	A	G	0.00081	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	46093161	C	T	0.00628	GPBP1L1	-	FALSE
chr8	41399912	C	A	0.00056	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr2	3192912	G	A	0.00168	TSSC1	-	FALSE
chr1	36068295	T	C	0.00910	PSMB2	-	TRUE	AluSc	SINE,Alu
chr5	130538304	A	G	0.00050	LYRM7	+	TRUE	FAM	SINE,Alu
chr1	92862879	A	G	3.90108E-09		.	FALSE	AluJr	SINE,Alu
chr2	8823941	G	A	0.00053	ID2	+	FALSE
chr1	16890656	C	T	0.00812	NBPF1	-	FALSE
chr3	33909024	A	T	0.00134	PDCD6IP	+	FALSE
chr1	36067838	T	C	2.61513E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	54691922	T	A	0.00219	SSBP3	-	FALSE
chr1	171561859	A	T	0.00439	PRRC2C	+	FALSE
chr1	101442211	T	C	0.00590	SLC30A7	+	FALSE
chr5	149763305	A	G	0.00640	TCOF1	+	FALSE
chr1	6282383	T	C	0.00130	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	990380	C	T	3.90118E-06	AGRN	+	FALSE
chr1	40537940	A	C	0.00155	CAP1	+	FALSE	(A)n	SINE,Alu
chr4	2940364	T	C	0.00718	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr7	44918772	T	C	0.00026	PURB	-	FALSE	AluSg	SINE,Alu
chr3	121351277	A	T	0.00388	HCLS1	-	FALSE
chr5	43290210	A	G	0.00565	HMGCS1	-	FALSE	A-rich	SINE,Alu
chr1	16889502	T	C	0.00516	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr3	183209035	T	C	9.98912E-07	KLHL6	-	TRUE	AluSq	SINE,Alu
chr3	50150389	A	G	0.00046	RBM5	+	TRUE	AluSx	SINE,Alu
chr1	160990906	G	A	0.00270	F11R	-	FALSE
chr6	170887693	G	C	0.00045	PDCD2	-	FALSE
chr1	33149375	A	G	0.00840	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr6	44417182	A	G	0.00018	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	120612163	C	A	0.00566	NOTCH2	-	FALSE
chr1	10043504	A	G	0.00213	NMNAT1	+	FALSE	AluSx3	SINE,Alu
chr1	100489571	G	A	1.40531E-05	SLC35A3	+	FALSE	AluSc	SINE,Alu
chr3	44791553	T	C	0.00298	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr12	125511952	A	G	0.00138	THRIL	-	FALSE	AluSx1	SINE,Alu
chr2	217366868	A	G	0.00100		.	FALSE	AluSz6	SINE,Alu
chr3	141667460	T	G	0.00193	TFDP2	-	FALSE
chr1	117531096	C	T	0.00168	PTGFRN	+	FALSE
chr1	33149502	A	G	0.00045	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	31732677	G	A	0.00030	SNRNP40	-	FALSE	A-rich	SINE,Alu
chr17	65335430	T	C	0.00019	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	16929327	C	T	0.00646	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	19810692	A	C	0.00069	CAPZB	-	FALSE
chr17	55752444	C	T	0.00000	MSI2	+	FALSE
chr12	12967264	C	G	0.00781	DDX47	+	FALSE
chr17	65335253	T	C	0.00344	PSMD12	-	TRUE	AluSx	SINE,Alu
chr5	93018883	A	T	0.00393	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr8	17089564	T	C	0.00165	CNOT7	-	FALSE
chr1	118069696	T	C	0.00922		.	FALSE
chr1	19543456	T	C	0.00760	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	19542310	T	C	0.00510	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	181058313	G	A	0.00651	IER5	+	FALSE
chr1	27338911	C	T	0.00455	FAM46B	-	FALSE
chr5	290174	C	T	0.00083	PDCD6	+	FALSE
chr1	23833607	A	T	0.00890	E2F2	-	FALSE
chr1	201846630	C	A	0.00041	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	15989141	C	G	0.00677		.	FALSE
chr1	10520378	T	C	0.00895		.	FALSE	AluSx1	SINE,Alu
chrX	23721424	G	C	0.00651		.	FALSE
chr1	21904374	A	C	0.00198	ALPL	+	FALSE
chr19	42375564	A	G	0.00117		.	FALSE	AluSx	SINE,Alu
chr1	64114301	T	C	0.00955	PGM1	+	FALSE
chr1	205272926	C	T	0.00690	NUAK2	-	FALSE
chr1	145282904	A	G	0.00542	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr22	31744347	A	G	0.00113	LINC01521	+	TRUE	AluSp	SINE,Alu
chr6	3022725	T	C	0.00081	HTATSF1P2	-	TRUE	AluSz	SINE,Alu
chr19	18124755	A	G	0.00480	ARRDC2	+	FALSE
chr6	31324036	T	A	0.00378		.	FALSE
chr3	14986110	T	C	0.00632	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr6	109785887	T	C	7.14632E-06	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr2	128602507	T	C	4.02376E-05		.	FALSE	AluSq2	SINE,Alu
chr2	99812446	A	G	0.00461	MRPL30	+	TRUE	AluSx	SINE,Alu
chr5	37291504	T	C	0.00878		.	FALSE	AluSx3	SINE,Alu
chr5	14397238	T	C	0.00552	TRIO	+	FALSE
chr2	86252038	T	C	0.00931	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	10519888	T	C	0.00218		.	FALSE	AluJr	SINE,Alu
chr1	179829595	T	C	0.00188	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr15	33064474	G	C	0.00653	FMN1	-	FALSE
chr6	31321916	A	G	0.00000		.	FALSE
chr1	28607959	C	A	0.00230	SESN2	+	FALSE
chrX	77084007	T	C	0.00141	MAGT1	-	TRUE	AluSz	SINE,Alu
chr12	57450118	T	A	0.00669	NEMP1	-	FALSE
chr1	228675570	G	C	0.00298	RNF187	+	FALSE
chr1	19585519	A	G	3.44907E-05	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr3	196670086	T	G	1.91816E-05	NCBP2-AS2	+	FALSE
chr1	200589813	C	A	1.20032E-05	KIF14	-	FALSE
chr1	10043053	A	G	0.00042	NMNAT1	+	TRUE	AluSc	SINE,Alu
chrX	123046772	A	G	0.00548	XIAP	+	TRUE	AluSz	SINE,Alu
chr2	37327702	T	C	0.00119		.	FALSE
chr19	58374130	C	T	0.00124	ZNF587	+	FALSE
chr3	45721905	A	G	0.00238	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr8	37613073	A	C	0.00394	ERLIN2	+	FALSE	(CCCCCAC)n	SINE,Alu
chr17	65335362	T	C	3.02375E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr2	176792488	G	T	0.00195	LNPK	-	FALSE
chr1	19984107	G	A	0.00963	MINOS1-NBL1,NBL1	+	FALSE
chr3	42592874	T	C	9.28376E-05	SEC22C	-	FALSE	AluJr	SINE,Alu
chr1	65330637	C	T	0.00047	JAK1	-	FALSE
chr8	30536143	T	C	0.00883	GSR	-	TRUE	AluJr	SINE,Alu
chr8	42043493	G	A	0.00045	PLAT	-	FALSE	MLT2C1	SINE,Alu
chr1	65693725	C	T	0.00202	AK4	+	FALSE
chr3	195243012	A	C	0.00128	PPP1R2	-	FALSE
chr3	156259331	T	C	0.00088	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	9160976	T	C	0.00015		.	FALSE	AluJb	SINE,Alu
chr9	80888613	A	G	0.00904		.	FALSE	AluSx	SINE,Alu
chr1	36067886	T	C	0.00925	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	10517314	T	C	0.00073		.	FALSE	AluJr	SINE,Alu
chr19	58375157	A	G	0.00408	ZNF587	+	TRUE	AluSx4	SINE,Alu
chr1	24151858	C	T	0.00104	HMGCL	-	FALSE
chr17	49042216	T	C	0.00746	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	8021778	T	C	0.00495	PARK7	+	FALSE
chr1	144594170	C	T	0.00636	NBPF20	+	FALSE
chr1	203277245	G	A	0.00115	BTG2	+	FALSE
chr16	29454288	T	C	9.60363E-06	SMG1P6,BOLA2-SMG1P6	-	FALSE	Tigger4a	SINE,Alu
chr9	96439041	A	T	0.00751	PHF2	+	FALSE
chr1	202984020	A	T	0.00842	TMEM183A,TMEM183B	+	FALSE
chr1	6582761	T	C	0.00052	NOL9	-	FALSE	AluSg	SINE,Alu
chr1	32661615	A	T	0.00454	TXLNA	+	FALSE
chr3	57612314	T	C	0.00529	DENND6A,PDE12	+,-	FALSE	AluSp	SINE,Alu
chr1	205056476	T	C	0.00096	RBBP5	-	FALSE	AluSx	SINE,Alu
chr1	15905501	G	A	0.00359	AGMAT	-	FALSE
chr3	194125524	C	T	0.00271	ATP13A3	-	FALSE
chr4	53364	G	A	0.00714	ZNF718,ZNF595	+	FALSE
chr12	133298254	A	G	1.64181E-10	PGAM5	+	TRUE	AluSp	SINE,Alu
chr4	39550978	T	C	0.00558	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr3	28390351	A	G	1.14010E-06	AZI2	-	FALSE
chr1	40435513	C	A	0.00656	MFSD2A	+	FALSE
chr8	144940368	C	T	0.00020	EPPK1	-	FALSE
chr17	57279253	A	G	1.08987E-07	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	118068699	C	G	0.00191		.	FALSE
chr1	201845882	G	A	0.00890	IPO9	+	FALSE
chr3	197611048	A	G	0.00064		.	FALSE	AluSx1	SINE,Alu
chr1	120695049	G	A	0.00129		.	FALSE
chr5	56177846	G	C	0.00952	MAP3K1	+	FALSE
chr1	11846092	G	T	0.00877	C1orf167,MTHFR	+,-	FALSE
chr1	144598641	C	T	0.00250	NBPF20	+	FALSE
chr1	20945264	A	C	0.00605	CDA	+	FALSE
chr2	110373919	G	A	0.00669	SOWAHC	+	FALSE
chr1	36068237	T	C	0.00150	PSMB2	-	TRUE	AluSc	SINE,Alu
chr7	6064009	C	G	0.00273	EIF2AK1	-	FALSE
chr1	16254872	C	A	1.11022E-16	SPEN	+	FALSE
chr1	145282600	A	C	0.00391	NBPF20,NOTCH2NL	+	FALSE	MER126	SINE,Alu
chr1	6282255	T	C	0.00954	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	53288862	A	G	0.00155	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	206480819	C	T	0.00663	PARD3B	+	FALSE
chr14	92629726	T	A	0.00787	CPSF2	+	FALSE
chr1	45244411	C	A	0.00656	RPS8	+	FALSE
chr9	137330709	G	T	0.00965	RXRA	+	FALSE	(GCTG)n	SINE,Alu
chr1	200375846	G	T	0.00061	ZNF281	-	FALSE	(T)n	SINE,Alu
chr1	201488143	A	G	0.00492		.	FALSE	AluSz	SINE,Alu
chr2	191184475	A	G	0.00895	HIBCH	-	FALSE
chr5	40852810	G	T	0.00276	CARD6	+	FALSE
chr1	24289896	T	G	0.00051	PNRC2	+	FALSE
chr1	31905889	A	G	0.00483	SERINC2	+	FALSE
chr1	16890598	T	A	0.00428	NBPF1	-	FALSE
chr1	148023067	C	T	0.00772	NBPF8	-	FALSE
chr2	128602455	T	C	0.00632		.	FALSE	AluSq2	SINE,Alu
chr1	10042987	A	G	8.46336E-05	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr12	69237507	A	G	0.00889	MDM2	+	TRUE
chr5	93018883	A	T	0.00181	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr2	69685864	A	C	0.00610	AAK1	-	FALSE	(CA)n	SINE,Alu
chr3	15114293	T	C	2.60553E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr1	79109337	G	T	0.00790	IFI44L	+	FALSE	LTR26	SINE,Alu
chr19	42376710	A	G	1.82395E-05		.	FALSE	AluSp	SINE,Alu
chr3	149237753	G	A	2.17555E-05	WWTR1	-	FALSE	AluSq2	SINE,Alu
chr1	144922523	C	T	0.00566	NBPF20,PDE4DIP	+,-	FALSE
chr17	73940918	T	C	6.48265E-05	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr4	17804847	T	C	0.00306	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	109746825	A	G	0.00281	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr3	98304403	G	A	0.00997	CPOX	-	FALSE
chr5	70503890	A	T	0.00188		.	FALSE
chr1	144930940	T	C	0.00181	NBPF20,PDE4DIP	+,-	FALSE
chr3	196079280	T	C	0.00614		.	FALSE	AluSx	SINE,Alu
chr19	36033460	C	T	0.00622	GAPDHS,TMEM147-AS1	+,-	FALSE
chr17	57279258	A	G	0.00114	PRR11	+	TRUE	AluSq2	SINE,Alu
chr7	100739267	G	A	0.00654		.	FALSE	AluSx	SINE,Alu
chr1	9416574	A	G	0.00144	SPSB1	+	FALSE
chr1	1447756	G	C	0.00354	ATAD3A	+	FALSE
chr1	33149363	A	G	0.00237	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	202993614	G	T	0.00990	TMEM183A	+	FALSE	(T)n	SINE,Alu
chr2	20648946	C	T	0.00531	RHOB	+	FALSE
chr1	220970028	A	G	0.00444	MARC1	+	FALSE
chr1	117530213	G	T	0.00256	PTGFRN	+	FALSE
chr1	24785393	C	T	0.00837	NIPAL3	+	FALSE
chr3	195461463	A	G	0.00609		.	FALSE	AluJb	SINE,Alu
chr1	24933701	A	G	0.00372	NCMAP	+	TRUE	AluJr	SINE,Alu
chr1	23636278	A	T	0.00085	HNRNPR	-	FALSE
chr4	114135223	A	T	5.22810E-05	ANK2	+	FALSE
chr3	195964298	A	G	0.00263		.	FALSE
chr17	49041732	T	C	0.00135	SPAG9	-	TRUE	AluSx	SINE,Alu
chr2	190617700	T	C	1.38394E-05	OSGEPL1	-	FALSE
chr1	17734207	G	A	0.00020	RCC2	-	FALSE
chr2	188330285	G	T	0.00590	TFPI	-	FALSE
chr3	9848222	A	T	0.00083	ARPC4,ARPC4-TTLL3	+	FALSE
chr20	35520229	T	C	3.77169E-05	TLDC2,SAMHD1	+,-	FALSE	AluSx3	SINE,Alu
chr2	118589029	T	G	0.00058	DDX18	+	FALSE
chr1	206635247	C	T	0.00291	SRGAP2	+	FALSE	(AC)n	SINE,Alu
chr5	151041873	A	G	0.00136	SPARC	-	FALSE
chr1	143189076	G	A	0.00048	LOC102723769	-	FALSE
chr1	10517352	T	C	0.00064		.	FALSE	AluJr	SINE,Alu
chr2	238463408	C	G	0.00644	MLPH	+	FALSE
chr17	65334967	T	C	0.00045	PSMD12	-	TRUE	AluSq	SINE,Alu
chr2	113513825	T	C	2.13681E-05	CKAP2L	-	FALSE
chr19	19791270	A	G	0.00732	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr1	1345006	A	G	1.26297E-06		.	FALSE	AluSg	SINE,Alu
chr1	45975740	C	G	0.00096	MMACHC	+	FALSE	AluSx4	SINE,Alu
chr1	16893721	A	C	0.00179	NBPF1	-	FALSE
chr1	86049391	T	A	0.00019	CYR61	+	FALSE
chr1	28662157	A	G	0.00159	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	33147722	G	A	1.17176E-11	SYNC,RBBP4	+,-	FALSE
chr1	46828700	A	G	0.00012	NSUN4	+	FALSE
chr1	235612219	T	A	0.00148	TBCE,B3GALNT2	+,-	FALSE
chr1	249139806	G	A	0.00983	ZNF672	+	FALSE
chr1	3730400	T	C	0.00800	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	46075664	A	G	0.00842	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	145369706	T	C	0.00186	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr14	93712365	A	G	0.00210	BTBD7	-	FALSE
chr1	1594835	C	G	0.00195	CDK11B,SLC35E2B	-	FALSE
chr4	39550564	T	C	0.00996	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr9	28403	G	T	1.21037E-06	WASH1	-	FALSE	MIR	SINE,Alu
chr2	201842434	T	C	1.94652E-05	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	200375418	C	T	0.00671	ZNF281	-	FALSE
chr1	220231461	T	C	0.00050	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr4	17803616	T	C	4.59289E-05	DCAF16	-	TRUE	AluY	SINE,Alu
chr8	1730500	A	G	3.50527E-05	CLN8	+	TRUE	AluSx1	SINE,Alu
chr2	158169499	A	G	0.00119	GALNT5	+	FALSE
chr1	1252662	T	C	0.00136	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	186281696	T	G	0.00564	PRG4,TPR	+,-	FALSE
chr6	42857179	C	A	0.00492	RPL7L1	+	FALSE	AluSp	SINE,Alu
chr3	40503561	A	T	0.00012	RPL14	+	FALSE

RBP	HNRNPF
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR693MZJ
Platform	HiSeq
Pubmed ID	32252787

HNRNPF - Target Gene Network