RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	183105534	T	C	0.00125	LAMC1	+	FALSE
chr1	155734530	T	C	0.00214	GON4L	-	TRUE
chr1	6651457	G	A	0.00614	KLHL21	-	FALSE
chr1	153599390	T	C	0.00135	S100A13	-	FALSE
chr5	81571669	C	T	0.00143	RPS23	-	FALSE
chr1	10518591	A	T	0.00811		.	FALSE
chr1	19543973	T	C	0.00236	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	40336210	C	T	0.00828	SLC8A1-AS1	+	FALSE
chr2	61277775	A	G	0.00113	PEX13	+	TRUE	AluY	SINE,Alu
chr1	89518173	T	A	0.00465	GBP1	-	FALSE
chr1	28858860	C	T	0.00213	RCC1	+	FALSE
chr9	33624856	C	T	0.00823	ANXA2P2	+	FALSE
chr2	37331077	T	C	0.00937		.	FALSE	AluSx1	SINE,Alu
chr1	3697486	C	G	0.00110	LRRC47	-	FALSE	AluSc	SINE,Alu
chr1	62627128	A	G	0.00111	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	28835847	A	G	4.14471E-06	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	46076642	A	G	0.00552	NASP	+	TRUE	AluSx	SINE,Alu
chr1	150783955	T	C	0.00077	ARNT	-	FALSE	(CA)n	SINE,Alu
chr1	47767914	G	A	0.00636	STIL	-	FALSE
chr4	40631476	C	A	5.49937E-05	RBM47	-	FALSE
chr1	225156655	C	T	0.00671	DNAH14	+	FALSE
chrX	9863112	A	G	0.00498	SHROOM2	+	FALSE
chr2	9630247	T	G	0.00638	ADAM17	-	FALSE
chr4	153701130	C	T	2.11271E-05	ARFIP1	+	FALSE
chr1	114515717	G	A	0.00018	HIPK1	+	FALSE
chr12	120898554	A	G	0.00124	GATC	+	TRUE	AluY	SINE,Alu
chr1	121133733	G	A	0.00552	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr15	65249466	A	G	2.07949E-05	ANKDD1A	+	TRUE	AluSz6	SINE,Alu
chr2	206984202	T	C	0.00849		.	FALSE	AluSx	SINE,Alu
chr1	10519947	T	C	0.00323		.	FALSE	AluJr	SINE,Alu
chr1	168215575	G	A	0.00688	ANKRD36BP1	-	FALSE
chr17	42876398	T	C	0.00697	GJC1	-	FALSE	AluSz6	SINE,Alu
chr3	73116437	C	G	1.00237E-05	PPP4R2	+	FALSE
chr1	144053664	A	C	0.00050		.	FALSE
chr21	34730010	A	G	0.00518	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr6	29857113	C	A	0.00582		.	FALSE
chr17	40723650	A	T	0.00250	MLX	+	FALSE
chr1	27533879	G	A	0.00877		.	FALSE
chr1	12401868	A	C	0.00526	VPS13D	+	FALSE
chr1	94995653	A	C	0.00035	F3	-	FALSE	AluSx	SINE,Alu
chr12	48539888	C	A	0.00088	PFKM	+	FALSE
chr1	10519982	T	C	0.00572		.	FALSE	AluJr	SINE,Alu
chr1	6311399	A	G	0.00126	GPR153	-	FALSE
chr1	118472401	C	T	0.00396	WDR3	+	FALSE
chr1	65299551	G	T	0.00292	JAK1	-	FALSE
chr1	213037745	C	G	0.00015	FLVCR1	+	FALSE
chr4	83406544	C	T	0.00328	TMEM150C	-	FALSE
chr2	37328016	T	C	5.08368E-07		.	FALSE
chr1	26143731	A	G	0.00337	SEPN1	+	FALSE	AluSx	SINE,Alu
chr2	98409998	G	T	0.00261	TMEM131	-	FALSE
chr1	32373837	G	T	0.00068	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr1	1421531	C	A	0.00409	ATAD3B	+	FALSE
chr1	148577409	C	A	0.00897	NBPF15	+	FALSE
chr1	145512141	A	G	0.00215	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	1595006	T	C	1.43617E-06	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr2	206987561	T	C	0.00235		.	FALSE	AluJb	SINE,Alu
chr1	148252785	T	C	0.00314	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	1252723	T	C	0.00367	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	143399338	G	A	0.00966		.	FALSE	L1MC4	SINE,Alu
chr2	10586904	C	T	0.00041	ODC1,SNORA80B	-	FALSE
chr1	193058937	C	T	0.00195	TROVE2	+	FALSE	AluSc	SINE,Alu
chr2	37328097	T	C	3.71887E-07		.	FALSE
chr1	10517567	T	C	0.00262		.	FALSE	AluSx1	SINE,Alu
chr1	16890630	T	G	0.00147	NBPF1	-	FALSE
chr16	15023271	G	A	0.00403		.	FALSE
chr19	13883927	A	G	0.00143	MRI1	+	TRUE	AluSz	SINE,Alu
chr2	176790393	C	T	0.00282	LNPK	-	FALSE	AluSp	SINE,Alu
chr3	52873072	A	C	0.00233	TMEM110-MUSTN1,TMEM110	-	FALSE
chr14	63841401	G	C	0.00014	PPP2R5E	-	FALSE
chr18	10752666	C	T	1.68498E-05	PIEZO2	-	FALSE
chr3	10192704	A	G	0.00402	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	988503	A	T	0.00402	AGRN	+	FALSE
chr1	184762627	T	C	0.00519	FAM129A	-	TRUE	AluSz	SINE,Alu
chr19	18306990	G	C	0.00090	MPV17L2	+	FALSE
chr1	1421531	C	A	0.00467	ATAD3B	+	FALSE
chr6	31321915	A	G	0.00000		.	FALSE
chr3	193334991	G	A	0.00473	OPA1	+	FALSE
chr1	79003523	C	G	0.00036	PTGFR	+	FALSE
chr3	45722381	A	G	0.00996	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	10043363	A	G	0.00429	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr1	193055149	A	G	0.00589	TROVE2	+	FALSE
chr6	28873868	T	C	0.00041		.	FALSE	AluJo	SINE,Alu
chr2	161130868	A	C	0.00297	RBMS1	-	FALSE
chr1	10518688	T	C	0.00154		.	FALSE	AluSx1	SINE,Alu
chr12	49745431	A	G	0.00033	DNAJC22	+	TRUE	AluSx3	SINE,Alu
chr6	150045755	T	C	0.00041	NUP43	-	TRUE	AluSq	SINE,Alu
chr19	13884422	A	G	0.00878	MRI1	+	TRUE	AluJr	SINE,Alu
chr14	66209686	T	A	7.37485E-06	FUT8	+	FALSE	(TT)n	SINE,Alu
chr1	46076599	A	G	0.00116	NASP	+	TRUE	AluSx	SINE,Alu
chr12	69160574	A	G	0.00891		.	FALSE	AluJb	SINE,Alu
chr1	40145850	G	C	0.00035	HPCAL4	-	FALSE
chr15	82336939	G	A	2.47536E-05	MEX3B	-	FALSE
chr15	23282993	G	A	0.00337	HERC2P2	-	FALSE
chr16	53525857	A	G	0.00093	AKTIP	-	FALSE
chrX	2825119	T	C	0.00670	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	11783001	A	G	0.00012		.	FALSE	AluSx	SINE,Alu
chr1	3730400	T	C	0.00457	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	54412181	T	C	0.00524	LRRC42	+	FALSE
chr3	49571462	G	T	0.00032	DAG1	+	FALSE
chr6	114178850	G	C	0.00045	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr1	10518733	T	C	0.00952		.	FALSE	AluSx1	SINE,Alu
chr1	988503	A	T	0.00141	AGRN	+	FALSE
chr1	40537940	A	C	0.00015	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	120162442	T	C	0.00065	ZNF697	-	FALSE
chr1	51434560	G	A	6.87938E-05	CDKN2C	+	FALSE
chr1	87811100	A	T	0.00084	LMO4	+	FALSE
chr19	11256703	T	C	2.95254E-05	SPC24	-	TRUE	AluJr4	SINE,Alu
chr14	90509564	C	T	0.00552	TDP1	+	FALSE
chr1	144594107	C	G	0.00706	NBPF20	+	FALSE
chr1	40213412	A	G	0.00235	PPIE	+	TRUE	AluSx3	SINE,Alu
chr1	53359745	A	G	0.00129	ZYG11A	+	TRUE	AluSx4	SINE,Alu
chr1	17320251	G	A	0.00367	ATP13A2	-	FALSE
chr1	19586501	A	G	0.00288	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	113672616	A	G	0.00450		.	FALSE	AluJb	SINE,Alu
chr1	179843781	T	C	0.00888	TOR1AIP2	-	TRUE	AluJb	SINE,Alu
chr3	86993604	G	T	0.00253	VGLL3	-	FALSE	AluJo	SINE,Alu
chr1	32697085	T	C	0.00366	EIF3I	+	FALSE	AluSp	SINE,Alu
chr1	145281656	A	T	0.00768	NBPF20,NOTCH2NL	+	FALSE
chr12	1602602	A	G	8.31525E-05	ERC1	+	FALSE	AluSx	SINE,Alu
chr3	57612180	T	C	0.00018	DENND6A,PDE12	+,-	FALSE	AluSp	SINE,Alu
chr1	204525667	A	G	3.94227E-05	MDM4	+	TRUE	AluSz	SINE,Alu
chr12	69237056	A	G	0.00372	MDM2	+	TRUE
chr2	61416407	G	T	0.00041	USP34	-	FALSE	AluSc8	SINE,Alu
chr8	95805070	A	G	0.00721	DPY19L4	+	TRUE	AluYf1	SINE,Alu
chr6	97592900	C	A	0.00076	MMS22L	-	FALSE
chr5	34189578	T	C	0.00378		.	FALSE
chr2	238678002	C	G	0.00711	LRRFIP1	+	FALSE
chr1	9331254	A	G	0.00793	H6PD	+	TRUE	AluSx	SINE,Alu
chr3	169492101	C	T	0.00402	MYNN	+	FALSE
chr3	196080528	T	C	0.00700	UBXN7	-	TRUE	AluSx	SINE,Alu
chr1	207942336	A	G	0.00586	CD46	+	TRUE	AluSg4	SINE,Alu
chr6	46128910	A	G	0.00782	ENPP5	-	FALSE	(GT)n	SINE,Alu
chr17	49042388	T	C	2.65954E-10	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	31192650	T	G	0.00727	MATN1,MATN1-AS1	+,-	FALSE
chr3	48787118	T	C	0.00248	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr2	24223251	A	G	0.00489	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr17	73703945	C	T	0.00242	SAP30BP	+	FALSE	MIRc	SINE,Alu
chr4	47514685	C	T	2.65771E-05	ATP10D	+	FALSE
chr1	23833607	A	T	0.00818	E2F2	-	FALSE
chr5	41917695	C	T	0.00019	C5orf51	+	FALSE
chr3	56654600	C	G	2.66528E-07	CCDC66,FAM208A	+,-	FALSE
chr1	45279813	T	C	0.00614		.	FALSE	(TCTT)n	SINE,Alu
chr4	17803026	T	C	0.00396	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	54563156	A	G	3.59804E-06	TCEANC2	+	FALSE
chr3	40577752	A	G	0.00111	ZNF621	+	TRUE	AluSz	SINE,Alu
chr1	33148706	A	G	0.00038	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	206669958	G	A	0.00347	IKBKE	+	FALSE
chr2	88327464	C	T	0.00046	KRCC1	-	FALSE
chr1	145512078	A	G	0.00099	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	20450819	T	C	0.00807	PUM2	-	TRUE
chr17	65334802	T	C	1.10547E-05	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	1650801	T	C	1.21097E-05	CDK11B,CDK11A	-	FALSE
chr1	144828857	C	G	4.37583E-07	NBPF20,NBPF9	+	FALSE
chr5	125961426	A	G	0.00434	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	114940246	C	A	0.00628	TRIM33	-	FALSE
chrX	123043142	A	G	0.00045	XIAP	+	TRUE	AluSz	SINE,Alu
chr8	56985611	A	T	0.00028	RPS20	-	FALSE
chr3	44791554	T	C	7.29341E-07	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr1	566678	C	T	0.00559		.	FALSE
chr5	70248477	T	A	0.00163	SMN1,SMN2	+	FALSE	L1MC5a	SINE,Alu
chr1	6282361	T	C	0.00634	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	21808159	G	A	9.34000E-05	NBPF3	+	FALSE
chr1	118502757	G	A	0.00793	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	10520153	T	C	0.00398		.	FALSE	AluSx	SINE,Alu
chr3	49396588	T	C	0.00239	RHOA	-	FALSE
chr6	13788297	T	C	0.00077	MCUR1	-	TRUE	AluSx	SINE,Alu
chr3	81539382	C	T	1.63276E-05	GBE1	-	FALSE
chr5	151041873	A	G	0.00136	SPARC	-	FALSE
chr1	19543282	T	C	0.00020	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	36067925	T	C	0.00397	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	150262002	G	T	0.00016	SERP1	-	FALSE
chr4	2841551	A	G	0.00258	SH3BP2	+	TRUE	AluJr	SINE,Alu
chr2	228421461	G	C	0.00069	AGFG1	+	FALSE
chr15	41591418	A	G	6.38388E-06	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	53680090	G	A	0.00321	C1orf123	-	FALSE
chr22	18572728	A	G	0.00050	PEX26	+	TRUE	AluYf1	SINE,Alu
chr1	27992798	C	A	0.00690	IFI6	-	FALSE	FAM	SINE,Alu
chr17	73940888	T	C	2.69053E-06	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr14	102901023	G	A	0.00546	TECPR2	+	FALSE
chr2	227662565	A	C	0.00028	IRS1	-	FALSE
chr18	11852628	C	T	0.00048	GNAL,CHMP1B	+	FALSE
chr6	42856029	A	G	7.18756E-05	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	24798520	A	C	0.00110	NIPAL3	+	FALSE
chr1	28826130	A	G	0.00207	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	1595527	T	C	0.00139	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	144955288	A	G	0.00574	NBPF20,PDE4DIP	+,-	FALSE
chr5	151041886	T	G	0.00176	SPARC	-	FALSE
chr2	174086940	C	A	0.00047	ZAK,MLK7-AS1	+,-	FALSE	AluJo	SINE,Alu
chr1	33961147	T	G	0.00196	ZSCAN20	+	FALSE
chr3	156258230	T	C	0.00011	SSR3	-	TRUE	AluYk3	SINE,Alu
chr4	49591495	G	C	0.00893		.	FALSE
chr3	121507231	A	T	0.00042	IQCB1	-	FALSE
chr6	26413368	T	G	0.01000	BTN3A1	+	FALSE
chr19	39874945	T	C	0.00335	SAMD4B	+	FALSE
chr5	41917694	T	C	0.00784	C5orf51	+	FALSE
chr19	23926877	A	T	0.00896	ZNF681	-	FALSE
chr1	114438951	A	G	0.00012	AP4B1-AS1,AP4B1	+,-	FALSE
chr2	217366191	T	A	0.00306		.	FALSE
chr3	10193683	T	G	0.00681	VHL	+	FALSE	AluJr	SINE,Alu
chr10	81114959	C	T	0.00048	PPIF	+	FALSE	MSTA	SINE,Alu
chr1	53289940	A	G	0.00245	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	36068210	T	C	0.00025	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	89447882	A	G	0.00103	KYAT3,RBMXL1	-	FALSE
chr1	165877671	T	C	0.00376	UCK2	+	FALSE	(T)n	SINE,Alu
chr2	97884961	G	A	0.00668	ANKRD36	+	FALSE
chr1	117530188	A	G	0.00199	PTGFRN	+	FALSE
chr1	10517688	T	C	0.00630		.	FALSE	AluSx1	SINE,Alu
chr2	201774641	T	C	0.00928		.	FALSE	AluJr4	SINE,Alu
chr1	28661767	A	G	0.00144	MED18	+	TRUE	AluSg	SINE,Alu
chr5	125962354	A	G	3.71532E-05	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	9161011	T	C	7.97270E-05		.	FALSE	AluJb	SINE,Alu
chr2	20401855	G	A	0.00107	SDC1	-	FALSE
chr1	160966353	T	C	0.00385	F11R	-	TRUE	AluSg	SINE,Alu
chr3	184429155	A	T	0.00056	MAGEF1	-	FALSE
chr17	3561396	C	T	0.00322	CTNS	+	FALSE
chr3	196771049	T	C	0.00010	DLG1	-	FALSE
chr1	95362514	G	T	7.06346E-05	CNN3	-	FALSE
chr1	214529725	T	C	0.00535	PTPN14	-	TRUE
chr3	40577755	A	G	0.00044	ZNF621	+	TRUE	AluSz	SINE,Alu
chr4	88059664	T	G	0.00178	AFF1	+	FALSE	(GT)n	SINE,Alu
chr6	44417182	A	G	0.00018	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr3	196660344	T	A	0.00366	SENP5	+	FALSE
chr1	118068558	G	A	0.00644		.	FALSE
chr1	36068278	T	C	0.00068	PSMB2	-	TRUE	AluSc	SINE,Alu
chr3	49067295	C	A	0.00740	QRICH1	-	FALSE
chr1	179327008	A	G	0.00168	SOAT1	+	TRUE
chr2	38975953	T	A	0.00432	SRSF7	-	FALSE
chr1	47844500	T	G	0.00169	CMPK1	+	FALSE
chr1	142449	G	A	0.00073		.	FALSE	MIRb	SINE,Alu
chr12	133298428	A	G	7.41792E-11	PGAM5	+	TRUE	AluSp	SINE,Alu
chr3	45960578	G	A	0.00632	FYCO1	-	FALSE
chr1	38279683	A	T	0.00685	MTF1	-	FALSE
chr3	196670081	C	G	0.00500	NCBP2-AS2	+	FALSE
chr1	32739982	G	A	0.00300	LCK	+	FALSE
chrX	54587196	A	G	0.00392	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr2	242615532	C	A	0.00603	DTYMK	-	FALSE
chr1	153920564	A	G	0.00747	CRTC2	-	FALSE
chr1	26143728	C	T	0.00800	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	6283305	T	C	0.00129	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	48787640	T	C	0.00320	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr2	1637648	T	C	9.03854E-11	PXDN	-	FALSE
chr14	105270480	T	G	0.00035	ZBTB42	+	FALSE
chr3	44790772	T	C	0.00024	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	90493918	G	A	0.00166	ZNF326	+	FALSE
chr2	55516903	G	A	3.31807E-05	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr1	47840938	A	G	0.00089	CMPK1	+	FALSE
chr2	201774244	T	C	0.00332		.	FALSE	AluSz	SINE,Alu
chr1	145512014	A	G	0.00370	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr7	2767939	T	C	0.00028	AMZ1,GNA12	+,-	FALSE
chr4	17804852	T	C	0.00600	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	10520117	T	C	0.00078		.	FALSE	AluSx	SINE,Alu
chr2	86251114	T	C	0.00709		.	FALSE	AluSx	SINE,Alu
chr3	45721891	A	G	0.00356	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	10520072	T	C	0.00115		.	FALSE	AluSx	SINE,Alu
chr3	169807548	T	C	0.00665	PHC3	-	TRUE	AluSx1	SINE,Alu
chr5	98128999	G	A	0.00663	RGMB	+	FALSE
chr1	16945027	T	C	0.00483	CROCCP2	-	FALSE	L1ME3Cz	SINE,Alu
chr2	232319529	T	A	1.32288E-06	NCL	-	FALSE
chr19	57802824	G	A	0.00924	ZNF460	+	FALSE
chr19	53914806	A	G	0.00221	ZNF765	+	TRUE	AluSp	SINE,Alu
chr1	120164252	G	A	0.00139	ZNF697	-	FALSE
chr1	42925688	T	G	0.00637	PPCS	+	FALSE
chr1	241792562	A	G	0.00800	OPN3,CHML	-	FALSE
chr2	99772813	A	G	1.48642E-06	LIPT1	+	TRUE	AluSx1	SINE,Alu
chr2	85548854	T	C	0.00097	TGOLN2	-	FALSE
chr12	993930	C	T	0.00163	WNK1	+	FALSE
chr1	117945049	G	A	0.00030	MAN1A2	+	FALSE
chr1	148556726	G	T	0.00976		.	FALSE
chr5	43700242	A	G	0.00932	NNT	+	FALSE
chr6	42060429	T	C	0.00017		.	FALSE	AluSz6	SINE,Alu
chr1	35644502	A	T	0.00702	SFPQ	-	FALSE	(A)n	SINE,Alu
chr8	146280802	C	T	0.00492	C8orf33	+	FALSE	LTR13	SINE,Alu
chr1	46075189	C	A	0.00597	NASP	+	FALSE	A-rich	SINE,Alu
chr1	67451521	A	T	0.00049	MIER1	+	FALSE
chr1	16889566	T	C	0.00436	NBPF1	-	TRUE
chr3	197682724	T	A	0.00556	IQCG	-	FALSE
chr1	24798499	T	C	0.00028	NIPAL3	+	FALSE	(T)n	SINE,Alu
chr2	105964472	C	T	0.00398	C2orf49	+	FALSE	(TTTCTCC)n	SINE,Alu
chr1	16890671	T	C	0.00097	NBPF1	-	FALSE
chr11	6703160	A	T	0.00111	MRPL17	-	FALSE
chr1	53288862	A	G	0.00799	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	160965379	T	C	0.00010	F11R	-	TRUE	AluSc	SINE,Alu
chr1	168220363	A	G	0.00488		.	FALSE	AluSz6	SINE,Alu
chr3	141667690	T	C	0.00018	TFDP2	-	TRUE	AluY	SINE,Alu
chr2	162268108	G	A	0.00091	PSMD14	+	FALSE
chr3	14986453	T	C	1.05842E-07	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr2	202031433	A	G	0.00611	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr15	40712737	T	C	0.00525	IVD	+	FALSE
chr1	33145958	G	T	0.00080	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr1	3546128	A	G	0.00213	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	93308168	T	A	0.00314	FAM69A	-	FALSE
chr1	9160989	T	C	0.00041		.	FALSE	AluJb	SINE,Alu
chr1	78414329	G	A	0.00785	FUBP1	-	FALSE	A-rich	SINE,Alu
chr4	3076659	A	C	0.00401	HTT	+	FALSE	(CAG)n	SINE,Alu
chr1	45241211	C	T	0.00947		.	FALSE
chr5	180682610	T	C	0.00014	CTC-338M12.4	+	FALSE
chr1	203839213	T	A	0.00800	SNRPE	+	FALSE
chr6	42856954	A	G	0.00037	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	36068052	G	T	1.69686E-12	PSMB2	-	FALSE	L1ME4b	SINE,Alu
chr1	92148839	T	C	0.00259	TGFBR3	-	FALSE
chr8	23290112	T	C	0.00121	ENTPD4	-	TRUE	AluY	SINE,Alu
chr2	101622884	C	A	0.00387	RPL31	+	FALSE
chr1	10517689	T	C	0.00504		.	FALSE	AluSx1	SINE,Alu
chr11	76733946	A	G	0.00725	ACER3	+	FALSE	A-rich	SINE,Alu
chr1	109812555	A	C	3.87556E-05	CELSR2	+	FALSE
chr5	79923793	T	C	0.00074	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	145284136	G	A	0.00072	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr1	200522059	A	T	0.00163	KIF14	-	FALSE	AluSg	SINE,Alu
chr6	74134781	T	C	0.00789		.	FALSE	AluSz	SINE,Alu
chr1	43917637	G	A	0.00164	SZT2,HYI	+,-	FALSE
chr1	9328120	A	G	0.00024	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	24746451	A	G	0.00683	NIPAL3	+	TRUE	AluSc	SINE,Alu
chr7	137612916	G	C	0.00356	CREB3L2	-	FALSE
chr1	33149373	A	G	0.00918	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	114940209	G	T	0.00177	TRIM33	-	FALSE	(T)n	SINE,Alu
chr6	99848757	C	T	0.00951	PNISR	-	FALSE	(TCTTTT)n	SINE,Alu
chr1	36770065	C	T	0.00131	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	11084103	T	A	0.00044	TARDBP	+	FALSE
chr2	3592674	C	A	0.00011	RNASEH1	-	FALSE
chr1	46830447	A	C	0.00168	NSUN4	+	FALSE	LTR108a_Mam	SINE,Alu
chr2	32535287	A	G	0.00891		.	FALSE	FLAM_C	SINE,Alu
chr2	85773061	A	G	0.00052	GGCX	-	FALSE
chr1	1344757	A	G	0.00024		.	FALSE	AluSx1	SINE,Alu
chr1	206579798	T	C	0.00883	SRGAP2	+	FALSE
chr1	145513017	A	G	0.00037	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr6	149912307	A	G	0.00026		.	FALSE	AluSc	SINE,Alu
chr3	15112612	T	C	0.00634	RBSN	-	TRUE	AluSq2	SINE,Alu
chr3	10192642	A	G	0.00714	VHL	+	TRUE	AluSx1	SINE,Alu
chr5	180682612	A	T	0.00235	CTC-338M12.4	+	FALSE
chr1	149913513	T	C	0.00495	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	27202959	T	C	0.00653		.	FALSE	AluSq2	SINE,Alu
chr17	46024807	C	T	0.00295	PNPO	+	FALSE
chr1	210004199	C	G	0.00531	DIEXF	+	FALSE
chr1	2333763	G	A	0.00867	RER1	+	FALSE
chr16	10623631	T	C	1.36144E-05	EMP2	-	TRUE	AluSp	SINE,Alu
chr13	107196415	C	T	0.00285	ARGLU1	-	FALSE	(TTG)n	SINE,Alu
chr1	10520819	T	C	0.00034	DFFA	-	TRUE	AluSc8	SINE,Alu
chr3	69151152	C	A	0.00750	ARL6IP5	+	FALSE
chr3	63996262	C	T	0.00273	PSMD6-AS2,PSMD6	+,-	FALSE
chr5	140594470	G	A	0.00041	PCDHB13	+	FALSE
chr6	105546950	T	C	0.00443	BVES	-	TRUE	AluJb	SINE,Alu
chr1	6704652	C	T	0.00000	DNAJC11	-	FALSE
chr3	156258255	T	C	0.00059	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	200521412	G	A	0.00292	KIF14	-	FALSE
chr1	94353045	G	T	0.00351	GCLM	-	FALSE	AluSg	SINE,Alu
chr4	145031951	T	A	0.00377	GYPA	-	FALSE	(TG)n	SINE,Alu
chrX	118672641	T	C	0.00027	CXorf56	-	TRUE	AluSx	SINE,Alu
chr1	145284883	A	G	0.00062	NBPF20,NOTCH2NL	+	FALSE	L2a	SINE,Alu
chr1	54692341	T	C	0.00027	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	9328120	A	G	0.00386	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	143398850	G	T	0.00639		.	FALSE
chr1	145284175	G	C	0.00481	NBPF20,NOTCH2NL	+	FALSE
chr1	10520154	T	C	0.00124		.	FALSE	AluSx	SINE,Alu
chr8	146035211	T	C	0.00116	ZNF517	+	FALSE	AluSx1	SINE,Alu
chr3	38566722	T	C	0.00426	EXOG	+	FALSE	MIRb	SINE,Alu
chr2	196600548	G	T	0.00036	SLC39A10	+	FALSE
chr1	27204437	T	C	0.00319		.	FALSE	AluSg7	SINE,Alu
chr3	50150360	A	G	0.00651	RBM5	+	TRUE	AluSx	SINE,Alu
chr12	56215099	T	A	0.00227	DNAJC14	-	FALSE
chr12	98943103	A	G	0.00306	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	12628188	T	C	6.05765E-06	DHRS3	-	FALSE
chr1	202861470	C	A	0.00441	KLHL12	-	FALSE
chr7	94060361	C	T	2.02320E-06	COL1A2	+	FALSE
chr5	179020622	T	C	2.11448E-05	RUFY1	+	FALSE
chr1	145513094	A	G	0.00633	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr10	77807027	T	C	0.00089	C10orf11	+	FALSE
chr1	23631625	A	G	0.00536	HNRNPR	-	FALSE	UCON44	SINE,Alu
chr1	8045340	C	A	0.00056	PARK7	+	FALSE
chr1	205501469	A	G	0.00113	CDK18	+	FALSE
chr1	16893841	C	T	0.00272	NBPF1	-	FALSE
chr10	51613231	T	C	2.61914E-05	TIMM23B,TIMM23	+,-	FALSE
chr1	6694226	C	T	0.00742	THAP3	+	FALSE
chr2	61277463	A	G	0.00826	PEX13	+	TRUE	AluSx	SINE,Alu
chr4	71685846	A	T	0.00465	GRSF1	-	FALSE
chr12	98943214	A	G	4.64520E-05	TMPO	+	TRUE	AluSz	SINE,Alu
chr2	105881071	C	A	0.00851	TGFBRAP1	-	FALSE
chr1	154916602	C	A	0.00475	PBXIP1	-	FALSE	MIRb	SINE,Alu
chr1	19543456	T	C	0.00386	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	6659505	G	A	0.00405	KLHL21	-	FALSE
chr1	204524914	A	G	0.00766	MDM4	+	TRUE	AluSx	SINE,Alu
chr2	8823958	G	A	0.00017	ID2	+	FALSE
chr15	83826216	C	T	0.00278	HDGFRP3	-	FALSE	(CTT)n	SINE,Alu
chr1	148010973	C	T	0.00045	NBPF8	-	FALSE
chr1	116243380	G	A	0.00426	CASQ2	-	FALSE
chr7	20178490	T	C	0.00028	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr3	196729939	C	T	0.00862	MELTF,MFI2-AS1	+,-	FALSE	G-rich	SINE,Alu
chr3	196662641	T	C	0.00059	NCBP2	-	FALSE
chr1	16929327	C	T	0.00646	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr8	27661037	A	T	0.00314	ESCO2	+	FALSE	A-rich	SINE,Alu
chr1	10521130	T	C	0.00860	DFFA	-	TRUE	AluY	SINE,Alu
chr1	184762524	T	C	0.00471	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	87213175	A	T	0.00082	SH3GLB1	+	FALSE
chr2	29135468	C	G	0.00217	WDR43	+	FALSE
chr1	10519912	T	C	0.00737		.	FALSE	AluJr	SINE,Alu
chr8	30536450	T	C	8.74573E-07	GSR	-	TRUE	AluSp	SINE,Alu
chr1	245006499	C	G	0.00171	COX20	+	FALSE
chr1	45244053	A	G	0.00202	RPS8	+	FALSE
chr1	145511993	A	G	0.00088	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr9	131071425	A	T	0.00068	TRUB2	-	FALSE
chr14	50713578	T	C	0.00260	L2HGDH	-	TRUE	AluSx	SINE,Alu
chr1	144931392	G	A	0.00241	NBPF20,PDE4DIP	+,-	FALSE
chr5	180663940	A	G	0.00331	RACK1	-	FALSE
chr1	46164493	T	C	0.00325	IPP	-	TRUE	AluJb	SINE,Alu
chr17	57279284	A	G	0.00149	PRR11	+	TRUE	AluSq2	SINE,Alu
chr1	27107948	G	A	0.00177	ARID1A	+	FALSE
chr1	210025751	G	A	4.42687E-05	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr2	207942527	A	T	0.00107	KLF7	-	FALSE
chr3	140695493	C	A	0.00559	SLC25A36	+	FALSE
chr8	42876058	A	G	0.00029	HOOK3	+	TRUE	AluSq2	SINE,Alu
chr7	35737649	G	A	0.00566	LOC101930085	+	FALSE	AluSz	SINE,Alu
chr3	15113656	T	C	1.73787E-06	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	19543309	T	C	0.00769	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr5	148873854	A	G	0.00453		.	FALSE
chr1	27212513	T	C	0.00260	GPN2	-	FALSE
chr5	10265488	A	G	0.00120	CCT5	+	FALSE
chr1	1361641	C	T	0.00928	TMEM88B	+	FALSE
chr1	145116149	T	A	0.00585	NBPF20,SEC22B	+	FALSE
chr12	72096318	A	G	0.00547	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr1	121133733	G	A	0.00455	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr3	196078364	G	A	6.64958E-05		.	FALSE	GA-rich	SINE,Alu
chr2	37328097	T	C	0.00091		.	FALSE
chr1	15736656	A	G	0.00958	EFHD2	+	FALSE
chr3	40560101	A	G	0.00322		.	FALSE	AluSc8	SINE,Alu
chr6	29910583	C	T	4.95604E-05		.	FALSE
chr17	48771489	T	A	0.00101	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr1	11141187	C	G	0.00814	EXOSC10	-	FALSE
chr17	40466890	G	T	0.00260	STAT3	-	FALSE	AluSc8	SINE,Alu
chr2	191799595	A	G	0.00162	GLS	+	FALSE
chr14	77787088	C	T	0.00076	POMT2	-	FALSE
chr6	31378387	T	C	0.00207		.	FALSE
chr7	20178420	T	C	0.00053	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr5	77655378	T	C	0.00555	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu

RBP	NSUN2
Knock-Method	shRNA
RBP Family	Methyltr_RsmB-F
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR829EFL
Platform	HiSeq
Pubmed ID	32252787

NSUN2 - Target Gene Network