RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	176739694	T	C	1.91391E-08	TBL1XR1	-	FALSE
chr1	155181396	A	G	0.00209	MTX1	+	FALSE
chr1	16889864	C	A	6.58858E-05	NBPF1	-	FALSE
chr1	1477244	T	C	0.00365	SSU72	-	FALSE
chr6	44417182	A	G	0.00018	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	61922059	C	A	0.00132	NFIA	+	FALSE	(A)n	SINE,Alu
chr8	95805070	A	G	0.00721	DPY19L4	+	TRUE	AluYf1	SINE,Alu
chr1	16932144	A	C	7.50683E-06	NBPF1	-	FALSE
chr3	42592902	T	C	5.80731E-05	SEC22C	-	FALSE	AluJr	SINE,Alu
chr2	37329300	T	C	0.00925		.	FALSE	AluJr4	SINE,Alu
chr1	203098275	T	G	0.00942	ADORA1	+	FALSE
chr1	205057482	A	T	0.00907	RBBP5	-	FALSE
chr10	114209888	A	G	0.00386	VTI1A	+	TRUE	AluSx3	SINE,Alu
chr1	10517952	C	A	0.00341		.	FALSE
chr1	169799880	G	T	0.00118	C1orf112	+	FALSE
chr2	109383604	G	A	0.00331	RANBP2	+	FALSE
chr1	33149376	A	G	0.00357	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	40503557	T	C	0.00746	RPL14	+	FALSE
chr2	37076498	A	C	0.00797	STRN	-	FALSE
chr1	93603177	T	C	0.00364	MTF2	+	FALSE
chr1	217804325	G	A	0.00229	GPATCH2	-	FALSE
chr5	130729522	T	G	0.00506	CDC42SE2	+	FALSE	(T)n	SINE,Alu
chr3	49506286	G	T	0.00052	DAG1	+	FALSE	AluJb	SINE,Alu
chr7	100072031	T	C	0.00238	TSC22D4	-	FALSE
chr1	94351065	A	T	0.00142	GCLM	-	FALSE
chr17	41133087	A	G	0.00141	RUNDC1	+	FALSE
chr15	41591039	A	G	0.00214	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr5	140594466	G	A	0.00209	PCDHB13	+	FALSE
chr17	4840811	A	G	0.00554	SLC25A11	-	FALSE
chr15	77403107	C	A	3.43068E-05	PEAK1	-	FALSE
chr1	33148210	A	G	0.00778	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	67874696	T	C	0.00245	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr12	125511958	A	G	0.00010	THRIL	-	FALSE	AluSx1	SINE,Alu
chr5	130537666	A	G	9.26326E-06	LYRM7	+	TRUE	AluJb	SINE,Alu
chr15	66791657	G	T	0.00422	RPL4	-	FALSE
chr1	94352646	G	T	0.00645	GCLM	-	FALSE	AluSx1	SINE,Alu
chr1	10044137	A	G	2.83529E-05	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr5	149829071	T	C	0.00407	RPS14	-	FALSE
chr3	69151152	C	A	0.00750	ARL6IP5	+	FALSE
chr1	212911836	T	C	0.00675	NSL1	-	FALSE
chr19	59093997	A	G	0.00047	CENPBD1P1	+	TRUE	AluY	SINE,Alu
chr5	96372165	G	A	0.00149		.	FALSE
chr3	10192596	A	G	9.40892E-06	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	37330611	T	C	0.00629		.	FALSE	AluSq2	SINE,Alu
chr10	120801785	T	A	0.00665	EIF3A	-	FALSE
chr7	105162638	G	C	0.00155	PUS7	-	FALSE
chr10	94414146	A	G	0.00911	KIF11	+	FALSE
chr1	11298093	C	T	1.54321E-14	MTOR	-	FALSE
chr4	2940026	T	C	0.00046	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr5	118174735	T	C	0.00046	DTWD2	-	TRUE	AluY	SINE,Alu
chr1	143135063	C	A	0.00397	LOC102723769	-	FALSE
chr3	42594019	C	T	3.51223E-05	SEC22C	-	FALSE
chr1	145688961	A	G	0.00324	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr6	31506635	T	G	6.78064E-05		.	FALSE
chr11	44641025	G	A	0.00850	CD82	+	FALSE
chr9	136335345	G	A	0.00490	CACFD1	+	FALSE	(TG)n	SINE,Alu
chr1	23636452	A	G	0.00294	HNRNPR	-	FALSE
chr1	31342374	A	C	0.00446	SDC3	-	FALSE	(A)n	SINE,Alu
chr1	36602176	G	T	0.00017	TRAPPC3	-	FALSE
chr1	566678	C	T	0.00559		.	FALSE
chr15	42859922	A	G	0.00731	HAUS2	+	TRUE	AluSx1	SINE,Alu
chr5	149013587	G	A	0.00102	ARHGEF37	+	FALSE	L2d	SINE,Alu
chr1	33149496	A	G	0.00308	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr9	19063167	C	T	0.00539	HAUS6	-	FALSE
chr6	116256595	C	A	5.71236E-05		.	FALSE
chr5	7885959	A	G	0.00628	MTRR	+	FALSE
chr1	16889639	T	C	0.00524	NBPF1	-	TRUE
chr1	53291420	A	G	0.00213	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	10520764	T	C	0.00542	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	144833405	C	A	0.00345	NBPF20	+	FALSE	L1MEc	SINE,Alu
chr11	8707397	T	A	0.00046	RPL27A	+	FALSE
chr1	155853219	A	G	0.00520	SYT11	+	TRUE	AluJb	SINE,Alu
chr19	42375624	A	G	0.00339		.	FALSE	AluSx	SINE,Alu
chr8	140475147	C	T	0.00719		.	FALSE
chr1	109855150	A	C	0.00251	SORT1	-	FALSE	A-rich	SINE,Alu
chr2	86250013	T	C	0.00867	LOC90784	-	TRUE	AluSx	SINE,Alu
chr2	44459528	G	A	0.00100	PPM1B	+	FALSE
chr21	37789767	A	G	0.00236		.	FALSE	AluSx	SINE,Alu
chr1	10518756	T	C	0.00323		.	FALSE	AluSx1	SINE,Alu
chr1	32661564	C	T	0.00058	TXLNA	+	FALSE	(T)n	SINE,Alu
chr1	19542310	T	C	2.12437E-06	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	36770065	C	T	0.00131	THRAP3	+	FALSE	(T)n	SINE,Alu
chr18	47014856	T	A	0.00722	RPL17-C18orf32,RPL17	-	FALSE
chr2	37331065	T	C	0.00293		.	FALSE	AluSx1	SINE,Alu
chr7	65844562	T	C	0.00695	LINC00174	-	FALSE
chr1	35648712	G	A	0.00298	SFPQ	-	FALSE
chr1	36534830	A	G	0.00470		.	FALSE	AluJo	SINE,Alu
chr3	44791454	A	T	3.12862E-05	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr2	37327685	T	C	0.00057		.	FALSE
chr1	160302244	T	C	0.00310	COPA	-	TRUE
chr1	19543457	T	C	0.00143	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	148004548	T	C	0.00110	NBPF8	-	FALSE
chr1	179042482	A	G	1.77761E-07	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr7	152345392	T	C	0.00643	XRCC2	-	TRUE	AluSx1	SINE,Alu
chr1	46159823	T	A	0.00823	TMEM69	+	FALSE
chr15	41597484	A	G	0.00619		.	FALSE	AluSz6	SINE,Alu
chr3	15483019	G	T	0.00751	EAF1	+	FALSE
chr1	206635245	T	C	0.00238	SRGAP2	+	FALSE
chr1	15993013	G	A	1.16652E-10		.	FALSE
chr4	83351845	G	T	0.00422	ENOPH1	+	FALSE
chr1	44463185	T	G	0.00397	SLC6A9	-	FALSE
chr1	36770599	G	T	0.00123	THRAP3	+	FALSE	(T)n	SINE,Alu
chr2	55452459	G	T	5.59903E-07	CLHC1	-	FALSE
chr1	9324451	C	T	0.00266	H6PD	+	FALSE
chr1	327407	A	G	0.00752		.	FALSE
chr1	9162223	T	C	0.00778		.	FALSE	AluSx	SINE,Alu
chrM	2619	A	T	0.00012	RNR2	+	FALSE	LSU-rRNA_Hsa	SINE,Alu
chr1	19542269	T	C	0.00744	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	120839743	C	T	0.00647	FAM72B	+	FALSE
chr2	220406239	T	G	0.00014	CHPF	-	FALSE	MIRb	SINE,Alu
chr1	33960062	A	G	0.00064	ZSCAN20	+	FALSE
chr1	156613517	C	A	0.00011	BCAN	+	FALSE
chr1	6282298	T	C	2.81673E-05	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	19665566	A	C	0.00028	CAPZB	-	FALSE
chr1	46164493	T	C	0.00977	IPP	-	TRUE	AluJb	SINE,Alu
chr1	206581246	T	C	0.00210	SRGAP2	+	FALSE
chr1	67874689	T	C	0.00896	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr7	157129834	C	G	1.26796E-05	DNAJB6	+	FALSE
chr3	169988286	C	T	0.00029	PRKCI	+	FALSE
chr5	31554465	A	T	1.69098E-06	C5orf22	+	FALSE
chr1	59142713	T	C	0.00078	MYSM1	-	FALSE
chr1	45975345	A	G	0.00129	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	16890130	A	C	0.00412	NBPF1	-	FALSE
chr1	35657874	G	C	0.00738	SFPQ	-	FALSE
chr1	16909208	C	G	0.00482	NBPF1	-	FALSE
chr1	19234174	A	G	0.00046	IFFO2	-	FALSE
chr1	6282383	T	C	0.00130	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	33148196	A	G	0.00529	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	19665310	C	T	0.00618	CAPZB	-	FALSE	(TTTCT)n	SINE,Alu
chr12	12618715	T	C	0.00714	BORCS5	+	FALSE
chr1	168220529	A	G	0.00161		.	FALSE	AluSz6	SINE,Alu
chr3	10290508	C	T	0.00682	TATDN2	+	FALSE
chr2	8823941	G	A	0.00053	ID2	+	FALSE
chr4	89181431	T	C	5.21801E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr1	25687901	T	C	0.00926	TMEM50A	+	FALSE
chr1	121133392	T	C	0.00651	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr1	12401868	A	C	0.00526	VPS13D	+	FALSE
chrX	77084001	T	C	1.05736E-07	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	1252221	T	C	0.00186	CPSF3L	-	TRUE	AluSx	SINE,Alu
chr1	32373563	G	A	0.00089	PTP4A2	-	FALSE
chr1	40537922	A	G	0.00686	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	9163319	T	C	0.00936		.	FALSE	AluSp	SINE,Alu
chr1	19542250	T	C	0.00015	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	114306369	A	T	0.00341	RSBN1	-	FALSE
chr9	137330713	T	G	0.00021	RXRA	+	FALSE
chr11	125763746	C	G	0.00166	HYLS1,PUS3	+,-	FALSE
chr1	142690928	C	A	0.00022		.	FALSE
chr1	245017462	G	A	0.00255	HNRNPU,SNORA100	-	FALSE
chr1	87379498	T	G	0.00784	SEP15	-	FALSE
chr1	11782984	A	G	0.00107		.	FALSE	AluSx	SINE,Alu
chr1	15909744	C	T	0.00100	AGMAT	-	FALSE
chr3	63997896	G	A	0.00301	PSMD6-AS2,PSMD6	+,-	FALSE
chr5	93018903	T	A	5.97109E-08	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr1	1662764	T	C	0.00505	SLC35E2	-	TRUE	AluY	SINE,Alu
chr5	125961455	A	G	0.00029	PHAX	+	TRUE	AluSz6	SINE,Alu
chr14	23300663	G	A	0.00120	MRPL52	+	FALSE	MIRb	SINE,Alu
chr1	16524869	T	C	0.00164	ARHGEF19	-	FALSE
chr1	114449662	T	C	0.00223	DCLRE1B	+	FALSE
chr1	6659505	G	A	0.00017	KLHL21	-	FALSE
chr19	21302045	A	G	0.00020	ZNF714	+	TRUE	AluSg4	SINE,Alu
chr1	33149496	A	G	0.00469	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	10942687	C	T	0.00082	PDIA6	-	FALSE
chr1	36067752	T	C	0.00402	PSMB2	-	TRUE	AluSz	SINE,Alu
chrX	77083538	T	C	0.00055	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	23519110	G	A	0.00268	HTR1D	-	FALSE	AluSc	SINE,Alu
chr1	44438961	A	G	0.00013	DPH2	+	FALSE	MER3	SINE,Alu
chr14	63841400	A	C	0.00122	PPP2R5E	-	FALSE
chr1	16905837	G	A	0.00029	NBPF1	-	FALSE
chr3	194125524	C	T	0.00271	ATP13A3	-	FALSE
chr19	7084638	A	G	0.00024	ZNF557	+	TRUE	AluJb	SINE,Alu
chr4	123816376	A	T	0.00445	FGF2,NUDT6	+,-	FALSE
chr1	205687358	T	C	0.00432	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr5	122165503	A	T	0.00170	SNX2	+	FALSE	(AC)n	SINE,Alu
chr8	41399722	A	G	0.00065	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr19	1037984	T	C	0.00908	CNN2	+	FALSE	(TT)n	SINE,Alu
chr1	45976723	T	C	0.00733	MMACHC,PRDX1	+,-	FALSE
chr1	160967856	T	C	0.00491	F11R	-	TRUE	AluSp	SINE,Alu
chr1	10520154	T	C	0.00380		.	FALSE	AluSx	SINE,Alu
chr2	74645427	A	G	0.00011	C2orf81	-	FALSE
chr2	204294497	C	T	0.00203	ABI2	+	FALSE
chr14	75202412	A	G	5.03546E-10	FCF1	+	TRUE	AluSc	SINE,Alu
chr4	57194712	A	C	0.00399	KIAA1211	+	FALSE
chr15	63988357	C	G	0.00539	HERC1	-	FALSE
chr16	75479484	T	C	1.12347E-07	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr2	216903544	T	C	0.00929	PECR	-	TRUE	AluSx3	SINE,Alu
chr5	52388459	A	T	0.00052	ITGA2	+	FALSE
chr15	85185045	T	C	0.00210	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chrX	152916233	C	A	0.00758	DUSP9	+	FALSE
chr1	9326888	T	C	0.00887	H6PD	+	FALSE	AluSx1	SINE,Alu
chr1	153963246	G	A	6.32081E-05	RPS27	+	FALSE
chr1	25655853	A	G	0.00147	RSRP1,RHD	+,-	FALSE	AluSz	SINE,Alu
chr2	85776590	T	C	0.00950	GGCX	-	TRUE	AluSz6	SINE,Alu
chr5	139876355	G	A	0.00815	ANKHD1,ANKHD1-EIF4EBP3	+	FALSE	GA-rich	SINE,Alu
chr5	56177850	A	T	0.00856	MAP3K1	+	FALSE	(CAA)n	SINE,Alu
chr2	128602507	T	C	4.02376E-05		.	FALSE	AluSq2	SINE,Alu
chr1	19543457	T	C	0.00362	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr11	769393	T	C	0.00186	PDDC1	-	TRUE	AluSq2	SINE,Alu
chr5	35064460	G	C	0.00920	PRLR	-	FALSE
chr5	174956494	T	A	2.51545E-05	SFXN1	+	FALSE
chr3	156258319	T	C	0.00012	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	10437995	G	A	0.00427	KIF1B	+	FALSE	AluSg	SINE,Alu
chr1	10520099	T	C	0.00152		.	FALSE	AluSx	SINE,Alu
chr3	33458266	T	C	0.00035	UBP1	-	FALSE
chr1	109816293	G	C	0.00759	CELSR2	+	FALSE
chr2	70452144	T	G	0.00191	TIA1	-	FALSE
chr20	25428669	A	G	0.00023	GINS1	+	TRUE	AluJb	SINE,Alu
chr3	44791343	T	C	0.00220	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr1	15896199	G	A	0.00483	DNAJC16	+	FALSE	AluSp	SINE,Alu
chr17	38512480	C	T	0.00725	RARA	+	FALSE
chr1	19934879	T	C	0.00454	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr3	189712010	G	A	1.42873E-07	P3H2	-	FALSE
chr1	68167935	A	G	0.00390	GNG12	-	FALSE
chr6	31132911	C	T	0.00000		.	FALSE
chr3	44790759	T	C	1.45198E-07	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	109746728	A	G	0.00171	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr12	27953264	A	T	0.00688	KLHL42	+	FALSE
chr2	85621889	C	T	0.00366	CAPG	-	FALSE
chr6	34254565	A	T	0.00617		.	FALSE	(A)n	SINE,Alu
chr1	68168152	C	T	0.00258	GNG12	-	FALSE
chr1	46076467	A	G	0.00118	NASP	+	TRUE	AluSx	SINE,Alu
chr19	16662827	T	C	0.00218	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr2	197184321	C	T	0.00923	HECW2	-	FALSE
chr15	33064148	T	C	1.59288E-05	FMN1	-	FALSE
chr1	156563898	T	C	0.00216	NAXE	+	FALSE
chr13	52989863	C	T	0.00132	VPS36	-	FALSE
chr2	220406239	T	G	0.00035	CHPF	-	FALSE	MIRb	SINE,Alu
chr1	27202812	T	C	0.00356		.	FALSE	AluSq2	SINE,Alu
chr4	36121334	C	G	0.00057	ARAP2	-	FALSE
chr1	36067784	T	C	2.18848E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	87573331	T	C	0.00699	HS2ST1	+	FALSE	(AT)n	SINE,Alu
chr17	4929861	A	G	0.00705	KIF1C	+	TRUE	AluJb	SINE,Alu
chr8	146280802	C	T	1.51873E-05	C8orf33	+	FALSE	LTR13	SINE,Alu
chr1	153533586	T	C	0.00358	S100A2	-	FALSE	Charlie18a	SINE,Alu
chr2	58387000	C	T	0.00027	VRK2,FANCL	+,-	FALSE
chr1	29631909	A	G	0.00029	PTPRU	+	FALSE
chr3	52028445	C	T	0.00934	RPL29	-	FALSE
chr1	75171751	T	C	0.00161	CRYZ	-	FALSE
chr1	33149260	A	G	0.00143	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr8	12880381	A	G	0.00031	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr2	37331546	T	C	0.00694		.	FALSE	AluJb	SINE,Alu
chr1	6583592	T	C	0.00939	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	40537923	G	A	0.00609	CAP1	+	FALSE	(A)n	SINE,Alu
chr2	207943789	G	T	0.00118	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr19	198079	T	C	0.00933	LINC01002	-	FALSE
chr5	148382005	C	A	8.42472E-06	SH3TC2	-	FALSE
chr1	120572572	C	T	0.00084	NOTCH2	-	FALSE
chr1	93826611	C	G	0.00072	DR1	+	FALSE
chr1	10519947	T	C	0.00323		.	FALSE	AluJr	SINE,Alu
chr1	113243048	C	T	0.00941	MOV10	+	FALSE
chr1	160967833	T	C	6.62581E-12	F11R	-	TRUE	AluSp	SINE,Alu
chr1	246829742	T	C	0.00960	CNST	+	FALSE	(TGTG)n	SINE,Alu
chr8	30536437	T	C	0.00062	GSR	-	FALSE	AluSp	SINE,Alu
chr1	145513090	A	G	0.00017	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	24296874	G	A	0.00627		.	FALSE	AluSg	SINE,Alu
chr1	9161218	T	C	0.00581		.	FALSE	AluSx	SINE,Alu
chr3	40578933	A	G	0.00947	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	40539203	A	T	0.00179	PPT1	-	FALSE
chr3	15114288	T	C	7.51597E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr3	41281407	G	T	0.00011	CTNNB1	+	FALSE
chr11	94801635	G	T	0.00844	SRSF8	+	FALSE
chr10	70277096	T	C	0.00229	SLC25A16	-	FALSE	L2c	SINE,Alu
chr6	74134075	T	C	0.00018		.	FALSE	AluY	SINE,Alu
chr4	155457052	T	A	0.00833	PLRG1	-	FALSE	L2d2	SINE,Alu
chr1	16958063	C	T	0.00246		.	FALSE
chr5	134670071	A	T	0.00405	C5orf66,H2AFY	+,-	FALSE
chr1	9161231	T	C	0.00481		.	FALSE	AluSx	SINE,Alu
chr2	128952015	A	G	0.00086	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	3730332	T	C	0.00025	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	36529582	A	G	0.00476		.	FALSE	AluJr	SINE,Alu
chr1	16912014	A	C	0.00029	NBPF1	-	FALSE
chr2	31491629	A	G	2.09863E-05		.	FALSE
chr1	230416414	T	G	0.00360	GALNT2	+	FALSE
chr1	45280099	A	G	0.00286		.	FALSE	AluYk3	SINE,Alu
chr2	102484482	G	A	0.00213	MAP4K4	+	FALSE
chr3	49452957	A	T	0.00066	TCTA	+	FALSE	AluSg	SINE,Alu
chr4	39550978	T	C	3.11849E-06	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	184661932	A	G	0.00063	EDEM3	-	FALSE
chr1	45975673	A	G	0.00827	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	45279900	T	C	0.00073		.	FALSE	(TCTT)n	SINE,Alu
chr1	28835847	A	G	0.00553	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr4	10076860	G	A	1.69987E-09	WDR1	-	FALSE
chr6	83921257	G	T	0.00876	ME1	-	FALSE
chr19	13883927	A	G	0.00143	MRI1	+	TRUE	AluSz	SINE,Alu
chr1	148556753	G	A	0.00472		.	FALSE
chr1	1419690	A	G	0.00464	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	155695968	A	G	0.00017	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	67896040	G	A	1.31286E-05	SERBP1	-	FALSE
chr1	145369476	A	G	0.00332	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr7	38764332	T	C	0.00209	VPS41	-	TRUE	AluSp	SINE,Alu
chr2	206986233	T	C	0.00109		.	FALSE	AluSz	SINE,Alu
chr1	220231254	T	C	0.00974	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	115313039	A	G	0.00895	SIKE1	-	FALSE
chr2	96918126	G	T	0.00821	TMEM127	-	FALSE
chr1	10520683	T	C	0.00457	DFFA	-	TRUE	AluSc8	SINE,Alu
chr7	44841237	T	A	0.00599	PPIA	+	FALSE
chr1	36068231	T	C	0.00508	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	19542463	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	65330637	C	T	0.00047	JAK1	-	FALSE
chr20	35409827	T	C	0.00267	SOGA1	-	TRUE	AluSx	SINE,Alu
chr1	156613632	G	A	0.00187	BCAN	+	FALSE
chr3	14986399	T	C	1.19850E-05	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	33139178	A	G	0.00108	RBBP4	+	TRUE	AluSx3	SINE,Alu
chr1	22419433	T	G	0.00156	CDC42	+	FALSE
chr1	46075664	A	G	0.00842	NASP	+	TRUE	AluSx4	SINE,Alu
chr5	154194459	C	A	0.00832	LARP1	+	FALSE
chr1	23636030	A	T	0.00067	HNRNPR	-	FALSE
chr7	105162562	G	C	0.00096	PUS7	-	FALSE
chr9	132266624	A	G	5.52448E-06	LINC00963	+	TRUE	AluSx	SINE,Alu
chr4	79447807	G	C	0.00339	FRAS1	+	FALSE
chr1	10517623	T	C	0.00145		.	FALSE	AluSx1	SINE,Alu
chr1	120163247	T	C	0.00010	ZNF697	-	FALSE
chr1	31905882	A	C	0.00132	SERINC2	+	FALSE
chr1	145281408	C	T	0.00087	NBPF20,NOTCH2NL	+	FALSE
chr1	33149414	A	G	0.00990	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	32799434	C	T	0.00227	MARCKSL1	-	FALSE
chr2	69689663	T	C	0.00091	AAK1	-	TRUE	AluSg	SINE,Alu
chr17	73940077	T	C	0.00146	ACOX1	-	TRUE	AluJb	SINE,Alu
chr3	45721990	A	G	0.00779	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr3	17199207	T	A	0.00075	TBC1D5	-	FALSE	A-rich	SINE,Alu
chr3	183898428	T	G	0.00611	AP2M1	+	FALSE
chr2	37328097	T	C	0.00301		.	FALSE
chr1	78445292	A	G	7.48186E-07	DNAJB4	+	FALSE
chr1	155214017	C	A	0.00261	GBA	-	FALSE	AluSx3	SINE,Alu
chr1	87573327	T	C	0.00571	HS2ST1	+	FALSE	(AT)n	SINE,Alu
chr1	16913677	T	C	0.00638	NBPF1	-	FALSE
chr17	65334868	T	C	0.00096	PSMD12	-	TRUE	AluSq	SINE,Alu
chr1	38279683	A	T	0.00685	MTF1	-	FALSE
chr5	68788642	G	C	3.71778E-05	OCLN	+	FALSE
chr1	22854702	C	T	4.66415E-11	ZBTB40	+	FALSE
chr1	229738170	T	G	0.00168	TAF5L	-	FALSE
chr2	67630980	G	A	0.00225	ETAA1	+	FALSE
chr1	9643155	A	G	0.00015		.	FALSE	AluSx	SINE,Alu
chr20	54943385	C	A	0.00844	FAM210B	+	FALSE
chr3	181430144	C	T	0.00043	SOX2-OT,SOX2	+	FALSE
chr11	32623987	T	A	5.29256E-06	CCDC73,EIF3M	+,-	FALSE
chr1	33071159	A	G	0.00947	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	1252441	T	C	0.00602	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr3	20025661	C	T	4.83976E-05	RAB5A,PP2D1	+,-	FALSE
chr17	73773311	T	G	0.00474	H3F3B	-	FALSE
chr1	158066834	A	G	0.00609	KIRREL	+	FALSE
chr1	988503	A	T	8.91206E-06	AGRN	+	FALSE
chr2	176792535	T	G	0.00211	LNPK	-	FALSE
chrX	77083939	T	C	5.71267E-05	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	10042911	A	G	0.00043	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr15	65442523	G	A	0.00068	CLPX	-	FALSE	AluSg4	SINE,Alu
chr1	26801731	G	T	0.00325	HMGN2	+	FALSE	(T)n	SINE,Alu
chr2	10050947	T	C	0.00273	TAF1B	+	FALSE
chr1	108742130	T	C	1.29742E-06	SLC25A24	-	FALSE
chr5	170837887	T	A	0.00401	NPM1	+	FALSE
chr12	56532056	G	C	0.00743	ESYT1	+	FALSE
chr1	19655758	T	A	0.00044	PQLC2	+	FALSE	AluSz	SINE,Alu
chr1	10517300	T	C	0.00113		.	FALSE	AluJr	SINE,Alu
chr4	3769307	C	A	0.00173	ADRA2C	+	FALSE
chr2	99992822	A	C	0.00266	EIF5B	+	FALSE
chr1	114940216	T	G	0.00148	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	120162587	G	A	0.00730	ZNF697	-	FALSE
chr3	196670081	C	G	0.00500	NCBP2-AS2	+	FALSE
chr3	40503554	A	C	0.00197	RPL14	+	FALSE
chr19	21474901	T	C	1.34658E-06	ZNF708	-	TRUE	AluSc	SINE,Alu
chr1	16889820	C	T	0.00012	NBPF1	-	FALSE
chr1	145688943	A	G	0.00492	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr3	195243006	C	A	0.00982	PPP1R2	-	FALSE
chr1	204521616	A	G	0.00455	MDM4	+	TRUE	AluSg	SINE,Alu
chr2	37330620	T	C	0.00216		.	FALSE	AluSq2	SINE,Alu
chr1	28566320	T	C	0.00309		.	FALSE	AluSx1	SINE,Alu
chr1	36067677	T	C	0.00522	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	135392426	T	C	8.62804E-07	TGFBI	+	FALSE
chr3	137787047	C	T	0.00735	DZIP1L	-	FALSE
chr1	28564252	A	G	0.00986	ATPIF1	+	FALSE
chr2	236957822	G	A	0.00929	AGAP1	+	FALSE
chr12	1611798	C	T	0.00338	LINC00942	+	FALSE
chr9	21863621	C	A	0.00123	MTAP	+	FALSE	AluY	SINE,Alu
chr2	240954005	C	A	0.00021	NDUFA10	-	FALSE
chr1	1650801	T	C	0.00359	CDK11B,CDK11A	-	FALSE
chr2	214182561	C	T	0.00703	SPAG16	+	FALSE	L1MC1	SINE,Alu
chr1	46828700	A	G	0.00805	NSUN4	+	FALSE
chr4	44176960	T	C	0.00043	KCTD8	-	FALSE
chr8	48890114	A	G	2.61683E-11	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	38423184	C	T	4.70100E-06	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	38326728	T	C	0.00079	INPP5B	-	TRUE	AluJr	SINE,Alu
chr6	13790848	T	C	0.00344	MCUR1	-	TRUE	AluSx1	SINE,Alu
chr1	1252248	A	G	0.00938	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr2	219100202	C	T	0.00027	ARPC2	+	FALSE	AluJr	SINE,Alu
chr3	179042910	A	G	0.00061	ZNF639	+	TRUE	AluSp	SINE,Alu
chr1	201488771	A	G	0.00062		.	FALSE	AluSq2	SINE,Alu
chr1	150190851	G	T	0.00339	ANP32E	-	FALSE
chr12	104186946	G	T	0.00523	NT5DC3	-	FALSE
chr1	52817434	T	C	0.00799	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr1	179044169	A	G	0.00039	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	110604747	G	A	0.00101	ALX3	-	FALSE
chr1	1344749	A	G	3.37361E-05		.	FALSE	AluSx1	SINE,Alu
chr14	57879959	G	A	0.00144		.	FALSE
chr1	19984461	C	T	0.00090	MINOS1-NBL1,NBL1	+	FALSE
chr1	1252513	T	C	0.00223	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr5	122359498	A	C	0.00362	PPIC	-	FALSE	(AC)n	SINE,Alu
chr1	44072018	C	T	0.00783	PTPRF	+	FALSE
chr8	23049112	T	C	0.00774	TNFRSF10A	-	TRUE
chr3	12940346	G	A	0.00411	IQSEC1	-	FALSE
chr1	145689611	C	A	0.00142	NBPF20,NBPF10	+	FALSE	AluSg	SINE,Alu
chr14	65400786	T	G	0.00077	CHURC1-FNTB,CHURC1	+	FALSE	AluSx	SINE,Alu
chr1	45452227	G	C	0.00084	EIF2B3	-	FALSE
chr2	230629138	C	T	0.00958	TRIP12	-	FALSE
chr1	235383188	A	G	0.00531	ARID4B	-	FALSE
chr1	1534676	C	T	4.01953E-10	FNDC10	-	FALSE
chr1	16254872	C	A	1.11022E-16	SPEN	+	FALSE
chr1	28904397	C	G	0.00125	TRNAU1AP	+	FALSE
chr1	10517314	T	C	8.82505E-05		.	FALSE	AluJr	SINE,Alu
chr1	16926980	T	C	0.00062	NBPF1	-	FALSE
chr5	177576461	A	T	0.00659		.	FALSE
chr1	10519112	T	C	0.00333		.	FALSE	AluSx3	SINE,Alu
chr3	196079280	T	C	0.00614		.	FALSE	AluSx	SINE,Alu
chr1	6283306	T	C	0.00558	ICMT	-	TRUE	AluSx3	SINE,Alu
chr19	42375549	A	G	4.56329E-05		.	FALSE	AluSx	SINE,Alu
chr1	101541172	A	G	6.48917E-05	LOC102606465	+	TRUE	MLT1K	SINE,Alu
chr1	36067817	T	C	7.91657E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	16895634	T	G	0.00472	NBPF1	-	FALSE
chr1	41972198	A	T	0.00276	HIVEP3	-	FALSE
chr1	162752670	G	A	0.00594		.	FALSE
chr1	53366576	A	G	0.00484	ECHDC2	-	FALSE	AluJb	SINE,Alu
chr1	145324364	C	G	0.00157	NBPF20,NBPF10	+	FALSE
chr1	145693958	A	G	3.55543E-06	NBPF20,NBPF10	+	TRUE	AluSz	SINE,Alu
chrX	16782947	A	G	0.00225		.	FALSE	AluJb	SINE,Alu
chr1	153932212	G	C	0.00340	SLC39A1	-	FALSE
chr1	33148635	A	G	5.38540E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	1650801	T	C	0.00827	CDK11B,CDK11A	-	FALSE
chr1	121115958	T	C	0.00147	SRGAP2-AS1,SRGAP2D,SRGAP2B,SRGAP2C	+,-	FALSE
chr1	148752615	C	A	0.00042		.	FALSE
chr1	9160982	T	C	0.00304		.	FALSE	AluJb	SINE,Alu
chr15	63616883	A	T	0.00036	CA12	-	FALSE
chr1	17393261	T	C	3.60266E-05	PADI2	-	FALSE
chr1	32799437	C	T	0.00318	MARCKSL1	-	FALSE
chrX	77084017	T	C	0.00179	MAGT1	-	TRUE	AluSz	SINE,Alu
chr5	175816758	T	A	0.00528		.	FALSE
chr14	50792933	C	T	0.00156	ATP5S	+	FALSE	AluSx	SINE,Alu
chr7	36447345	A	T	0.00553	ANLN	+	FALSE
chr17	43002237	C	A	0.00141	KIF18B	-	FALSE
chr1	19543783	T	C	0.00822	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	27205871	G	T	0.00931		.	FALSE
chr1	21101369	T	C	0.00028	HP1BP3	-	TRUE	AluSc	SINE,Alu
chr1	144598755	G	A	0.00743	NBPF20	+	FALSE
chr3	58306797	A	G	8.72021E-05		.	FALSE	AluSz	SINE,Alu
chr1	222906392	C	T	0.00804	BROX	+	FALSE	AluSx	SINE,Alu
chr1	46033497	T	C	0.00719	AKR1A1	+	FALSE	AluYk3	SINE,Alu
chr2	202028727	A	G	0.00833	CFLAR	+	TRUE	AluSx1	SINE,Alu
chr1	45244421	G	A	0.00925		.	FALSE
chr1	38327542	T	C	0.00068	INPP5B	-	TRUE	AluSx3	SINE,Alu
chr1	1534826	C	T	0.00382	FNDC10	-	FALSE
chr1	28825337	A	G	0.00167	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	1234095	C	A	0.00039	ACAP3	-	FALSE
chr5	135382989	G	C	7.70449E-09	TGFBI	+	FALSE
chr4	57326873	A	G	0.00034	PAICS	+	TRUE	AluSx1	SINE,Alu
chr3	32496328	C	A	0.00013	CMTM7	+	FALSE
chr1	45279903	C	T	0.00052		.	FALSE	(TCTT)n	SINE,Alu
chr1	9328243	A	G	0.00616	H6PD	+	TRUE	AluJr	SINE,Alu
chr11	8707396	C	A	0.00081	RPL27A	+	FALSE
chr2	85132777	T	C	1.13350E-06	TMSB10	+	FALSE
chr1	213037745	C	G	0.00015	FLVCR1	+	FALSE
chr4	39551167	T	C	0.00361	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	241794056	C	A	0.00753	OPN3,CHML	-	FALSE
chr19	13054905	T	C	0.00324	CALR	+	FALSE	(T)n	SINE,Alu
chr12	72096330	A	G	0.00014	TMEM19	+	TRUE	AluSz6	SINE,Alu
chr4	177252238	A	G	9.63526E-05	SPCS3	+	TRUE
chr3	113351702	A	G	0.00042		.	FALSE	7SLRNA	SINE,Alu
chr2	37331929	T	C	0.00518		.	FALSE	L1MC4	SINE,Alu
chr3	86992161	C	G	0.00050	VGLL3	-	FALSE	(GT)n	SINE,Alu
chr1	204526795	A	G	0.00199	MDM4	+	TRUE	AluSx	SINE,Alu

RBP	SF3B1
Knock-Method	shRNA
RBP Family	SF3b1
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR896CFV
Platform	HiSeq
Pubmed ID	32252787

SF3B1 - Target Gene Network