RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	154323560	A	T	0.00013	ATP8B2	+	FALSE
chr3	4403537	C	T	0.00055	SUMF1	-	FALSE	MIR3	SINE,Alu
chr1	19542311	T	C	0.00682	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	33148736	A	G	4.97736E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr6	108363821	T	C	0.00769	OSTM1	-	TRUE	AluJb	SINE,Alu
chrX	153760176	A	G	0.00209	G6PD	-	FALSE
chr1	31905888	C	A	0.00667	SERINC2	+	FALSE
chr3	9519219	C	T	0.00146	SETD5	+	FALSE
chr19	53155674	T	C	1.27993E-05	ZNF83	-	TRUE	AluSg	SINE,Alu
chr5	112350098	C	T	7.36383E-05	DCP2	+	FALSE
chr1	91990445	A	G	0.00784	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr6	42981526	C	G	0.00129	MEA1	-	FALSE
chr1	26608018	G	A	2.25777E-05		.	FALSE
chr19	46214293	C	T	0.00137	FBXO46	-	FALSE
chr1	145512930	A	G	5.47366E-06	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	58306802	G	A	4.03384E-05		.	FALSE	AluSz	SINE,Alu
chr2	206981874	T	C	0.00060		.	FALSE	AluJb	SINE,Alu
chr1	58971831	G	A	0.00801	OMA1	-	FALSE
chr1	193054154	G	A	0.00757	TROVE2	+	FALSE
chr2	203922075	A	G	0.00058	NBEAL1	+	FALSE
chr1	145500933	C	T	0.00982	NBPF20,NBPF10,LIX1L	+	FALSE
chr5	79277952	A	C	0.00041	MTX3	-	FALSE	(AC)n	SINE,Alu
chr2	91843429	G	A	0.00037	LOC654342	-	FALSE
chr1	148252049	A	C	0.00666	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	225974645	A	G	0.00984	SRP9	+	TRUE	AluJr	SINE,Alu
chr10	22825288	G	A	0.00051	PIP4K2A	-	FALSE
chr3	101284940	T	C	8.16697E-05	TRMT10C	+	FALSE
chr11	86646405	C	A	9.05139E-05	PRSS23	+	FALSE	L2b	SINE,Alu
chr1	35649749	C	A	0.00597	SFPQ	-	FALSE
chr9	132268942	A	G	0.00104	LINC00963	+	TRUE	AluYf1	SINE,Alu
chr15	28502279	A	G	0.00120	HERC2	-	FALSE
chr5	114951140	T	G	0.00761	TMED7-TICAM2,LOC101927100,TMED7	+,-	FALSE
chr1	40537940	A	C	0.00155	CAP1	+	FALSE	(A)n	SINE,Alu
chr5	138618619	A	G	0.00513	SNHG4,MATR3	+	TRUE	AluSx	SINE,Alu
chr12	125512494	A	G	0.00427		.	FALSE	AluY	SINE,Alu
chr12	98943201	A	G	9.51066E-07	TMPO	+	TRUE	AluSz	SINE,Alu
chr19	58356478	A	G	0.00030	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr4	89181451	T	C	8.32748E-05	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr7	128169979	T	G	0.00569		.	FALSE
chr2	129024188	T	G	0.00051	HS6ST1	-	FALSE
chr1	179042551	A	G	0.00336	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	16889820	C	T	0.00012	NBPF1	-	FALSE
chr1	150548904	A	T	0.00052	MCL1	-	FALSE
chr16	88784415	T	C	0.00750	PIEZO1	-	TRUE	AluSx3	SINE,Alu
chr1	71531596	A	G	0.00016	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr12	19671149	C	T	0.00315	AEBP2	+	FALSE
chr5	6633042	C	T	0.00377	NSUN2	-	FALSE
chr1	148556784	G	A	0.00543		.	FALSE
chr13	52602919	A	C	0.00117	ALG11,UTP14C	+	FALSE
chr3	10976876	A	G	0.00343	SLC6A11	+	FALSE
chr1	326499	A	G	0.00583		.	FALSE
chr2	37331125	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr19	18476232	A	G	0.00189	PGPEP1	+	TRUE	AluJb	SINE,Alu
chr9	34088016	G	A	0.00226	DCAF12	-	FALSE
chr6	42854739	A	C	0.00671	RPL7L1	+	FALSE	AluSc	SINE,Alu
chr1	100658578	G	A	0.00030	DBT	-	FALSE
chr15	63616881	G	A	0.00026	CA12	-	FALSE
chr15	90819444	A	G	5.90002E-05		.	FALSE	AluSx	SINE,Alu
chr19	39433142	T	A	0.00215	FBXO17	-	FALSE	AluJb	SINE,Alu
chr1	154315369	C	T	0.00022	ATP8B2	+	FALSE
chr3	14526648	T	G	9.03719E-05	SLC6A6	+	FALSE
chr1	1650801	T	C	0.00359	CDK11B,CDK11A	-	FALSE
chr19	9672943	T	C	1.63385E-06		.	FALSE	AluSx3	SINE,Alu
chr5	140025058	G	T	0.00392	NDUFA2	-	FALSE
chr8	37613073	A	C	0.00394	ERLIN2	+	FALSE	(CCCCCAC)n	SINE,Alu
chr1	33148789	A	G	0.00568	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	11710798	T	G	0.00328	FBXO2	-	FALSE	(CCT)n	SINE,Alu
chr19	39669600	A	G	0.00619	PAK4	+	FALSE	(TG)n	SINE,Alu
chr1	153917621	G	C	0.00020	DENND4B	-	FALSE
chr1	157092836	G	A	0.00383		.	FALSE
chr1	16907328	G	T	0.00973	NBPF1	-	FALSE
chr1	179876988	C	G	0.00047	TOR1AIP1	+	FALSE
chr5	125962175	A	G	0.00020	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	16892918	T	C	0.00128	NBPF1	-	FALSE
chr1	145283718	G	A	0.00897	NBPF20,NOTCH2NL	+	FALSE
chr1	115299505	A	T	0.00064	CSDE1	-	FALSE
chr3	12624763	T	C	1.62214E-06	MKRN2	+	FALSE
chr1	46159809	T	A	0.00761	TMEM69	+	FALSE
chr5	125961079	A	G	0.00258	PHAX	+	TRUE	AluSz	SINE,Alu
chr1	9163502	T	C	0.00366		.	FALSE	AluSp	SINE,Alu
chr1	53378536	T	C	0.00075	ECHDC2	-	TRUE	AluSp	SINE,Alu
chr1	182356399	A	G	0.00740	GLUL	-	FALSE
chr1	36067784	T	C	0.00821	PSMB2	-	TRUE	AluSz	SINE,Alu
chr7	148700783	G	A	0.00557	PDIA4	-	FALSE
chr1	104097685	C	T	0.00028	RNPC3,AMY2B	+	FALSE
chr8	1730491	A	G	5.38446E-06	CLN8	+	TRUE	AluSx1	SINE,Alu
chr1	113672616	A	G	0.00450		.	FALSE	AluJb	SINE,Alu
chr7	6501820	A	T	0.00288	KDELR2	-	FALSE
chr15	42503335	T	C	0.00023	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr7	80373463	A	C	0.00399	SEMA3C	-	FALSE
chr1	117530273	A	G	0.00270	PTGFRN	+	FALSE
chr12	100556267	T	C	0.00071	GOLGA2P5	-	FALSE
chr4	248996	A	G	0.00123	ZNF876P	+	TRUE	AluYk3	SINE,Alu
chr19	1981317	T	A	0.00539	CSNK1G2	+	FALSE
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr2	203742188	T	C	0.00522		.	FALSE	AluJb	SINE,Alu
chr1	164473	T	C	0.00152		.	FALSE	AluSq2	SINE,Alu
chr4	129924977	C	A	0.00760	SCLT1	-	FALSE
chr1	24999463	G	T	0.00012	SRRM1	+	FALSE	(T)n	SINE,Alu
chr5	154194459	C	A	0.00832	LARP1	+	FALSE
chr1	51822219	G	A	0.00017	EPS15	-	FALSE
chr1	28864731	A	G	0.00477	RCC1	+	FALSE
chr1	6311399	A	G	0.00126	GPR153	-	FALSE
chr1	3731959	C	T	0.00089	CEP104	-	FALSE
chr3	195961254	C	T	0.00119		.	FALSE
chr1	145369476	A	G	0.00332	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr1	10521126	T	C	0.00560	DFFA	-	TRUE	AluY	SINE,Alu
chr1	145688671	A	T	0.00822	NBPF20,NBPF10,RNF115	+	FALSE
chr17	48771488	C	A	0.00148	ANKRD40	-	FALSE	AluSz	SINE,Alu
chr2	37330606	T	C	0.00136		.	FALSE	AluSq2	SINE,Alu
chr1	10520154	T	C	0.00018		.	FALSE	AluSx	SINE,Alu
chr2	130807905	G	T	0.00634	FAR2P1	-	FALSE
chr15	90819594	A	G	9.20455E-05		.	FALSE	AluSx	SINE,Alu
chr8	25272423	G	T	0.00659	DOCK5	+	FALSE
chr8	146200325	T	C	0.00599	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr1	204526631	A	G	0.00536	MDM4	+	TRUE	AluSx	SINE,Alu
chr12	27953264	A	T	0.00688	KLHL42	+	FALSE
chr1	10517623	T	C	0.00664		.	FALSE	AluSx1	SINE,Alu
chr1	36068325	T	C	3.42972E-06	PSMB2	-	TRUE	AluSc	SINE,Alu
chr19	24103951	A	G	0.00082	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr5	41917694	T	C	0.00784	C5orf51	+	FALSE
chr1	148595665	A	G	0.00062	NBPF15	+	TRUE	L1MC4	SINE,Alu
chr1	6585215	C	T	0.00286	NOL9	-	FALSE	FAM	SINE,Alu
chr1	24134721	T	C	0.00448	HMGCL	-	FALSE
chr1	201488771	A	G	0.00062		.	FALSE	AluSq2	SINE,Alu
chr1	6582425	T	C	0.00039	NOL9	-	TRUE	AluSx1	SINE,Alu
chr2	220422583	G	A	0.00089	OBSL1	-	FALSE
chr3	50327662	G	A	0.00707	IFRD2	-	FALSE
chr1	10520145	T	C	0.00424		.	FALSE	AluSx	SINE,Alu
chr6	34231301	G	C	0.00772		.	FALSE
chr1	19943823	C	A	0.00752	MINOS1,MINOS1-NBL1	+	FALSE
chr2	10270775	G	T	0.00953	RRM2	+	FALSE	AluSx	SINE,Alu
chr9	139417333	G	A	0.00463	NOTCH1	-	FALSE
chr1	220154768	C	T	0.00067	RNU5F-1,EPRS	+,-	FALSE
chr1	29631909	A	G	0.00029	PTPRU	+	FALSE
chr1	145512944	A	G	0.00178	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr3	12857493	C	T	0.00720	CAND2	+	FALSE
chr1	65720330	A	C	0.00211		.	FALSE
chr1	146649940	C	T	1.24118E-05	PDIA3P1	+	FALSE
chr9	136335345	G	A	0.00490	CACFD1	+	FALSE	(TG)n	SINE,Alu
chr1	207943385	A	G	0.00558	CD46	+	TRUE	AluSx1	SINE,Alu
chr2	61764895	C	A	0.00862	XPO1	-	FALSE	(AC)n	SINE,Alu
chr1	247319489	G	A	0.00729	ZNF124	-	FALSE
chr5	79923793	T	C	0.00074	DHFR	-	TRUE	AluSp	SINE,Alu
chr15	63988357	C	G	0.00539	HERC1	-	FALSE
chr1	121133779	C	G	2.29819E-05	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr19	21474857	T	C	0.00131	ZNF708	-	TRUE	AluSc	SINE,Alu
chr14	78390880	T	C	0.00050	ADCK1	+	FALSE
chr7	128143932	A	G	0.00332		.	FALSE	AluSq2	SINE,Alu
chr5	32404176	C	T	0.00342	ZFR	-	FALSE
chr6	24720539	G	C	0.00225		.	FALSE
chr2	170497653	T	G	0.00587		.	FALSE
chr1	36068281	T	C	0.00331	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	19543783	T	C	0.00822	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	206986949	T	C	0.00693		.	FALSE	AluJr	SINE,Alu
chr1	180943529	C	T	0.00297	STX6	-	FALSE
chr6	160211652	C	G	0.00719	MRPL18	+	FALSE
chr1	45975740	C	G	0.00096	MMACHC	+	FALSE	AluSx4	SINE,Alu
chr1	9910358	T	C	0.00083	CTNNBIP1	-	FALSE
chr1	114940216	T	G	0.00207	TRIM33	-	FALSE	(T)n	SINE,Alu
chr2	37328042	T	C	6.80414E-06		.	FALSE
chr3	179116220	T	C	0.00233	GNB4	-	TRUE	AluSz6	SINE,Alu
chr3	99517485	C	A	0.00088	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr1	3730400	T	C	0.00894	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	19586532	A	G	0.00769	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	169101270	T	G	0.00036	ATP1B1	+	FALSE	(T)n	SINE,Alu
chr11	118875356	A	G	0.00051	CCDC84	+	TRUE
chr5	72801323	C	A	0.00119	BTF3	+	FALSE
chr1	1594977	T	C	0.00314	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chrX	9863112	A	G	0.00498	SHROOM2	+	FALSE
chr1	28661656	A	G	0.00319	MED18	+	TRUE	AluSg	SINE,Alu
chr2	238499528	T	G	0.00332	RAB17	-	FALSE
chr1	9642830	T	A	0.00059	SLC25A33	+	FALSE
chr2	86364707	G	T	0.00131	PTCD3	+	FALSE
chr7	5085646	C	T	0.00168	RBAK-RBAKDN,RBAK	+	FALSE
chr6	32800221	C	T	0.00900		.	FALSE	(GCATCA)n	SINE,Alu
chr15	90815820	A	G	0.00171		.	FALSE	FRAM	SINE,Alu
chr1	25894471	G	A	0.00778	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	226333556	C	A	0.00977	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr1	174983207	T	G	0.00681	MRPS14	-	FALSE
chr1	1650797	A	G	0.00798	CDK11B,CDK11A	-	FALSE
chr2	61416406	T	G	0.00010	USP34	-	FALSE	AluSc8	SINE,Alu
chr1	145273431	A	G	7.55666E-05	NBPF20,NOTCH2NL	+	FALSE
chr1	145100772	A	G	0.00945	NBPF20,SEC22B	+	TRUE	AluSg4	SINE,Alu
chr1	153963246	G	A	6.32081E-05	RPS27	+	FALSE
chr1	21780000	G	T	0.00153	NBPF3	+	FALSE	ERVL-E-int	SINE,Alu
chr2	191556844	T	A	0.00261	NAB1	+	FALSE
chr3	112320485	T	C	0.00107	LINC01279	-	TRUE	AluJb	SINE,Alu
chr5	156905300	A	C	0.00870	ADAM19	-	FALSE	MER92B	SINE,Alu
chr1	242011534	A	G	0.00248	EXO1	+	FALSE
chr1	10517314	T	C	8.82505E-05		.	FALSE	AluJr	SINE,Alu
chr3	196558949	A	G	6.63189E-10	PAK2	+	FALSE
chr1	6582689	T	C	4.44823E-05	NOL9	-	TRUE	AluSg	SINE,Alu
chr1	144596317	C	T	0.00020	NBPF20	+	FALSE	AluJb	SINE,Alu
chr5	56177851	A	T	0.00796	MAP3K1	+	FALSE	(CAA)n	SINE,Alu
chr1	33149373	A	G	0.00918	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	242176182	G	A	2.43141E-09	HDLBP	-	FALSE
chr7	158590740	A	T	0.00211	ESYT2	-	FALSE
chr3	141012493	C	A	0.00249	PXYLP1	+	FALSE	MER58A	SINE,Alu
chr2	3192912	G	A	0.00168	TSSC1	-	FALSE
chr1	26755136	A	G	0.00279	LIN28A	+	FALSE	AluSx1	SINE,Alu
chr7	6501832	A	C	0.00175	KDELR2	-	FALSE
chr1	24288530	A	T	0.00031	PNRC2	+	FALSE
chr4	152025795	T	A	0.00516	RPS3A	+	FALSE
chr1	11347154	A	T	0.00441	UBIAD1	+	FALSE
chr3	69154081	G	A	0.00999	ARL6IP5	+	FALSE
chr1	52817376	T	C	0.00175	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr13	96506664	A	G	5.36176E-05	UGGT2	-	FALSE
chr14	31916782	T	C	4.67250E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr4	103715820	A	C	0.00652	LOC102723704,UBE2D3	+,-	FALSE	(A)n	SINE,Alu
chr1	1255402	C	G	0.00333	CPSF3L	-	FALSE	(GCAGG)n	SINE,Alu
chr4	17803578	T	C	0.00712	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	65299551	G	T	0.00292	JAK1	-	FALSE
chr1	118066459	A	G	0.00788	MAN1A2	+	FALSE
chr6	150047423	T	C	0.00688	NUP43	-	TRUE	AluSc	SINE,Alu
chr17	62541203	G	A	0.00660	SMURF2	-	FALSE
chr2	202252539	G	A	0.00293	TRAK2	-	FALSE
chr1	205320515	A	G	0.00022	KLHDC8A	-	FALSE
chr1	118167515	C	T	4.87028E-05	FAM46C	+	FALSE
chr1	67468124	G	C	0.00201	SLC35D1	-	FALSE
chr1	54354935	G	C	0.00831	YIPF1	-	FALSE
chr1	160990906	G	A	0.00270	F11R	-	FALSE
chr4	190878580	A	G	0.00097	FRG1	+	FALSE
chr1	89447720	G	A	0.00497	KYAT3,RBMXL1	-	FALSE
chr4	17803673	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	28661657	A	G	0.00910	MED18	+	TRUE	AluSg	SINE,Alu
chr9	115447518	T	C	0.00084	INIP	-	TRUE	AluJb	SINE,Alu
chr3	195393406	C	T	0.00690	SDHAP2	+	FALSE
chr1	155161704	G	C	0.00034	MUC1	-	FALSE
chr2	179371305	A	G	0.00696	MIR548N	+	FALSE
chr2	238678004	A	G	0.00631	LRRFIP1	+	FALSE
chr2	189159003	G	A	0.00260	GULP1	+	FALSE
chr4	120981118	T	A	0.00024	MAD2L1	-	FALSE
chr1	1595388	A	G	0.00135	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr4	184238324	G	A	0.00870	WWC2	+	FALSE
chr18	11852628	C	T	0.00048	GNAL,CHMP1B	+	FALSE
chr3	40578843	A	G	0.00749	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	144595935	G	A	0.00860	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	15904318	C	T	0.00109	AGMAT	-	FALSE
chr1	229439639	T	A	0.00276	RAB4A	+	FALSE
chr19	18047216	C	A	0.00113	CCDC124	+	FALSE
chr2	152132130	A	G	0.00071	NMI	-	FALSE
chr19	37236432	T	C	0.00333	ZNF850	-	TRUE	AluSp	SINE,Alu
chr1	16932181	C	T	0.00641	NBPF1	-	FALSE
chr18	691521	T	C	0.00150	ENOSF1	-	TRUE	AluJr	SINE,Alu
chr4	109551183	T	A	0.00270	RPL34	+	FALSE
chr1	41088377	C	T	8.47840E-10	RIMS3	-	FALSE
chr7	143003526	A	T	0.00050	CASP2	+	FALSE	AluY	SINE,Alu
chr10	13320111	G	T	0.00571	PHYH	-	FALSE
chr4	66439443	T	C	0.00593	EPHA5	-	FALSE
chr3	137787192	T	C	0.00764	DZIP1L	-	FALSE
chr1	46075715	A	G	0.00058	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	53291382	A	G	0.00132	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	36789546	A	G	0.00562	EVA1B	-	FALSE	MIRb	SINE,Alu
chr2	206987738	T	C	0.00859		.	FALSE	AluJb	SINE,Alu
chr19	19792288	A	G	0.00379	ZNF101	+	TRUE	AluJb	SINE,Alu
chr1	184675814	G	A	0.00048	EDEM3	-	FALSE
chr3	14985983	A	T	6.81677E-14	FGD5-AS1	-	FALSE
chr3	180694878	A	T	0.00431	FXR1	+	FALSE	(T)n	SINE,Alu
chr1	114306374	G	A	0.00124	RSBN1	-	FALSE
chr1	210025751	G	A	0.00067	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr1	6259658	G	C	0.00012	RPL22	-	FALSE
chr3	73116347	T	A	0.00109	PPP4R2	+	FALSE
chr5	96498783	G	A	0.00056	RIOK2	-	FALSE
chr1	35648711	A	C	0.00377	SFPQ	-	FALSE
chr14	69254646	T	C	0.00181	ZFP36L1	-	FALSE
chr14	75202645	A	G	3.73418E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr3	123368013	A	G	0.00812	MYLK	-	FALSE
chr6	33384326	A	T	0.00678		.	FALSE
chr4	6644327	A	G	0.00000	MRFAP1	+	FALSE
chr20	18468512	T	C	0.00072	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	10517306	T	C	0.00176		.	FALSE	AluJr	SINE,Alu
chr6	42855256	A	G	0.00572	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr1	9328243	A	G	0.00616	H6PD	+	TRUE	AluJr	SINE,Alu
chr15	77403107	C	A	3.43068E-05	PEAK1	-	FALSE
chr1	31838550	T	A	0.00595	FABP3	-	FALSE
chr1	160967843	T	C	0.00247	F11R	-	TRUE	AluSp	SINE,Alu
chr6	42855972	A	G	0.00182	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	36531942	A	G	0.00042		.	FALSE	AluSq2	SINE,Alu
chr1	67874252	C	A	0.00558	SERBP1	-	FALSE
chr1	121115958	T	C	0.00147	SRGAP2-AS1,SRGAP2D,SRGAP2B,SRGAP2C	+,-	FALSE
chr10	13687171	T	C	0.00033	FRMD4A	-	FALSE
chr1	204521625	A	G	0.00808	MDM4	+	TRUE	AluSg	SINE,Alu
chr1	9163290	T	C	0.00130		.	FALSE	AluSp	SINE,Alu
chr1	10520487	T	C	0.00638		.	FALSE	AluSx1	SINE,Alu
chr1	29041856	A	G	0.00756	GMEB1	+	TRUE	AluSq4	SINE,Alu
chr11	65544381	T	C	0.00433	AP5B1	-	TRUE	AluJb	SINE,Alu
chr8	12880246	A	G	0.00012	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr17	61502460	T	A	0.00161	TANC2	+	FALSE
chr3	24019987	A	C	0.00563	NR1D2	+	FALSE
chr3	195963910	C	T	0.00149		.	FALSE
chr1	228880098	T	A	4.07865E-05	RHOU	+	FALSE
chr3	45721836	A	G	0.00310	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr4	129795663	T	A	0.00165	JADE1	+	FALSE
chr1	71532815	G	A	0.00712	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr1	19543309	T	C	0.00769	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	10520296	T	C	0.00299		.	FALSE	AluSx	SINE,Alu
chr7	135291501	T	C	0.00627	NUP205	+	FALSE
chr1	150190851	G	T	0.00339	ANP32E	-	FALSE
chr1	19586458	A	G	2.46370E-10	MRTO4	+	TRUE	AluSz	SINE,Alu
chr17	37006249	T	C	0.00774		.	FALSE	AluSx	SINE,Alu
chr1	78184325	A	G	0.00150	USP33	-	FALSE
chr1	19543282	T	C	0.00228	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	148561089	T	C	0.00011	NBPF15	+	FALSE
chr19	11257634	T	C	0.00237	SPC24	-	TRUE	AluSp	SINE,Alu
chr3	57548976	A	G	0.00132	PDE12	+	TRUE	FRAM	SINE,Alu
chr6	29911970	G	A	0.00284		.	FALSE
chr3	10028294	G	A	1.35555E-07	EMC3	-	FALSE
chr1	36068369	T	C	0.00012	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	101893244	C	A	0.00332	RNF149	-	FALSE	(A)n	SINE,Alu
chr1	36068231	T	C	9.19439E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	55452459	G	T	5.59903E-07	CLHC1	-	FALSE
chr4	17802956	T	C	0.00249	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	25894469	A	T	0.00326	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	201975173	G	T	0.00053	RNPEP	+	FALSE
chr1	10044366	A	G	0.00958	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr14	75203036	A	G	0.00837	FCF1	+	TRUE	AluSx	SINE,Alu
chr1	171501831	A	G	0.00037	PRRC2C	+	FALSE
chr7	99055940	T	C	0.00289	ATP5J2-PTCD1,ATP5J2	-	FALSE
chr3	40577755	A	G	0.00044	ZNF621	+	TRUE	AluSz	SINE,Alu
chr4	2940135	T	C	5.42423E-07	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	16890130	A	C	0.00728	NBPF1	-	FALSE
chr3	39137794	T	C	0.00240	WDR48	+	FALSE
chr1	90470915	T	A	9.94810E-07	ZNF326	+	FALSE
chr1	220232143	T	C	7.81076E-05	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	10517290	T	C	0.00366		.	FALSE	AluJr	SINE,Alu
chr10	51613297	A	G	0.00347	TIMM23B,TIMM23	+,-	FALSE
chr3	14986137	T	C	1.37684E-08	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr14	70838264	T	C	0.00059	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr1	20978304	T	A	0.00018	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr2	112874290	A	T	0.00455	TMEM87B	+	FALSE
chr17	79514129	G	A	0.00164	FAAP100	-	FALSE
chr2	37331038	T	C	4.65669E-05		.	FALSE	AluSx1	SINE,Alu
chr1	85733095	G	A	0.00651	BCL10	-	FALSE

RBP	SUGP2
Knock-Method	shRNA
RBP Family	Surp
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR837QDN
Platform	HiSeq
Pubmed ID	32252787

SUGP2 - Target Gene Network