RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	172412829	T	A	0.00477	CYBRD1	+	FALSE
chr19	19459215	C	T	0.00068	MAU2	+	FALSE
chr1	184761312	T	C	0.00308	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	26138325	G	A	0.00245	SEPN1	+	FALSE
chr17	73940888	T	C	2.69053E-06	ACOX1	-	TRUE	AluSx1	SINE,Alu
chr1	31905882	A	C	0.00132	SERINC2	+	FALSE
chr5	145838680	A	G	0.00395	TCERG1	+	FALSE	(GCCCAG)n	SINE,Alu
chr1	19585207	G	A	0.00672	MRTO4	+	FALSE
chr1	38423199	A	T	0.00192	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	28864731	A	G	0.00477	RCC1	+	FALSE
chr5	37290493	T	C	3.58668E-05		.	FALSE	AluSz	SINE,Alu
chr1	47716042	A	T	0.00574	STIL	-	FALSE
chr1	45452227	G	C	0.00256	EIF2B3	-	FALSE
chr1	44088117	G	T	0.00584	PTPRF	+	FALSE	(T)n	SINE,Alu
chr3	45267321	C	T	0.00059	TMEM158	-	FALSE
chr1	10521254	T	C	0.00640	DFFA	-	TRUE	AluY	SINE,Alu
chr20	25427801	A	G	0.00300	GINS1	+	TRUE	AluSz	SINE,Alu
chr4	2940477	T	C	1.61307E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	154554947	T	G	0.00511	ADAR	-	FALSE
chr1	62627128	A	G	0.00111	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	53711735	G	C	0.00884	LRP8	-	FALSE
chr19	39433140	G	T	0.00260	FBXO17	-	FALSE	AluJb	SINE,Alu
chr10	11912065	C	G	0.00191	PROSER2-AS1,PROSER2	+,-	FALSE
chr3	45721990	A	G	0.00022	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	9331255	A	G	0.00992	H6PD	+	TRUE	AluSx	SINE,Alu
chr1	205581853	C	T	0.00750	ELK4	-	FALSE
chr2	86251151	T	C	0.00763		.	FALSE	AluSx	SINE,Alu
chr1	26898378	C	A	0.00148	RPS6KA1	+	FALSE
chr1	6651728	C	T	0.00118	KLHL21	-	FALSE
chr15	92715131	A	T	0.00306	SLCO3A1	+	FALSE
chr1	19578192	G	A	0.00778	MRTO4	+	FALSE
chr16	11445552	T	C	0.00533	RMI2	+	FALSE
chr1	241795525	A	G	0.00165	OPN3,CHML	-	FALSE	THE1B	SINE,Alu
chr12	133298255	A	G	0.00016	PGAM5	+	TRUE	AluSp	SINE,Alu
chr1	10520099	T	C	0.00659		.	FALSE	AluSx	SINE,Alu
chr7	17384887	A	G	4.32861E-08	AHR	+	TRUE	AluSc	SINE,Alu
chr14	90509587	G	T	0.00203	TDP1	+	FALSE
chr2	86249906	T	C	0.00352	LOC90784	-	TRUE	AluJr	SINE,Alu
chr2	217366821	A	G	0.00510		.	FALSE	AluSz6	SINE,Alu
chr1	16912099	G	C	0.00450	NBPF1	-	FALSE
chr2	128602455	T	C	0.00632		.	FALSE	AluSq2	SINE,Alu
chr1	179042719	A	G	5.24590E-05	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	25570561	T	A	0.00425	RSRP1	-	FALSE	Alu	SINE,Alu
chr12	98943162	A	G	5.01524E-05	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	15988702	T	C	0.00362		.	FALSE
chr1	20826788	A	T	6.12716E-05	MUL1	-	FALSE
chr2	217366541	A	G	0.00071		.	FALSE	AluSz	SINE,Alu
chr1	100550370	T	A	0.00743	SASS6	-	FALSE
chr1	24296869	G	T	0.00902		.	FALSE	AluSg	SINE,Alu
chr1	23519110	G	A	0.00268	HTR1D	-	FALSE	AluSc	SINE,Alu
chr1	146650289	C	T	0.00736	PDIA3P1	+	FALSE
chr3	195961254	C	T	0.00119		.	FALSE
chr3	123368013	A	G	0.00812	MYLK	-	FALSE
chr1	40537944	C	A	0.00506	CAP1	+	FALSE
chr1	6282315	T	C	0.00508	ICMT	-	TRUE	AluSz	SINE,Alu
chr4	13604182	T	C	1.45661E-06	BOD1L1	-	FALSE
chr7	65618870	A	G	0.00097	CRCP	+	TRUE	AluSx3	SINE,Alu
chr1	45671434	G	C	0.00819	ZSWIM5	-	FALSE
chr4	152020782	C	T	0.00989	RPS3A	+	FALSE
chr16	2882267	G	C	0.00252	ZG16B	+	FALSE
chr2	197000455	T	C	0.00426	STK17B	-	FALSE	AluSz	SINE,Alu
chr1	46075663	A	G	0.00240	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	46032974	T	C	0.00141	AKR1A1	+	FALSE
chr1	86049390	A	G	0.00918	CYR61	+	FALSE
chr4	17803748	T	A	0.00859	DCAF16	-	FALSE
chr12	123253741	A	G	0.00134	DENR	+	TRUE	(AT)n	SINE,Alu
chr5	125961623	A	G	4.58304E-06	PHAX	+	TRUE	AluSz6	SINE,Alu
chr18	2803231	A	T	0.00638	SMCHD1	+	FALSE
chr1	9163334	T	C	0.00108		.	FALSE	AluSp	SINE,Alu
chr7	143003517	T	A	0.00251	CASP2	+	FALSE	AluY	SINE,Alu
chr2	152334389	A	G	0.00308		.	FALSE	AluSq	SINE,Alu
chr1	21806710	T	G	0.00194	NBPF3	+	FALSE
chr1	201438095	C	G	3.49736E-05	PHLDA3	-	FALSE
chr1	117530273	A	G	0.00601	PTGFRN	+	FALSE
chr8	12283440	A	G	0.00041	FAM86B2	-	FALSE
chr1	78414310	C	A	0.00067	FUBP1	-	FALSE
chr3	191114266	T	C	0.00258	CCDC50	+	FALSE
chr2	9629293	T	G	0.00426	ADAM17	-	FALSE	(TGT)n	SINE,Alu
chr1	42925688	T	G	0.00637	PPCS	+	FALSE
chr1	26143725	A	T	0.00920	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	17735266	G	A	0.00471	RCC2	-	FALSE
chr1	23636274	G	T	0.00165	HNRNPR	-	FALSE
chr4	17804785	T	C	0.00273	DCAF16	-	TRUE	AluSx	SINE,Alu
chr4	2940485	T	C	2.93326E-08	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	93804952	G	A	0.00421	CCDC18-AS1	-	FALSE
chr2	37331565	T	C	0.00121		.	FALSE	AluJb	SINE,Alu
chr1	16812082	A	G	0.00545	CROCCP3	-	FALSE
chr16	19725719	C	T	0.00471	KNOP1	-	FALSE
chr2	37327665	T	C	2.45403E-06		.	FALSE
chr2	206987725	T	C	0.00108		.	FALSE	AluJb	SINE,Alu
chr1	53288870	A	G	0.00501	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	24494671	T	C	0.00244	ITSN2	-	FALSE	(TATCCT)n	SINE,Alu
chr4	139091459	T	C	9.74854E-05	SLC7A11-AS1,SLC7A11	+,-	FALSE	(TA)n	SINE,Alu
chr3	27674782	A	G	0.00630		.	FALSE
chr1	165877575	A	C	0.00839	UCK2	+	FALSE
chr1	214524178	T	C	0.00265	PTPN14	-	TRUE	AluSx	SINE,Alu
chrX	77083007	T	C	0.00371	MAGT1	-	TRUE	AluSg	SINE,Alu
chr1	10520174	T	C	0.00413		.	FALSE	AluSx	SINE,Alu
chr10	75632760	C	T	0.00013	CAMK2G	-	FALSE
chr1	16893813	A	G	7.34801E-05	NBPF1	-	FALSE
chr6	3022725	T	C	0.00081	HTATSF1P2	-	TRUE	AluSz	SINE,Alu
chr15	42550349	A	C	0.00120	TMEM87A	-	FALSE
chr1	11347150	C	A	0.00016	UBIAD1	+	FALSE
chr1	28662253	A	G	0.00117	MED18	+	TRUE	AluSq2	SINE,Alu
chr12	3150859	C	T	0.00317		.	FALSE	(CCTCCCTG)n	SINE,Alu
chr1	38463504	C	T	0.00068	FHL3	-	FALSE
chr1	210025751	G	A	4.42687E-05	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr2	113509977	C	T	0.00197	CKAP2L	-	FALSE
chr5	135513089	T	A	7.47633E-06	SMAD5	+	FALSE
chr19	9672981	T	C	0.00041		.	FALSE	AluSx3	SINE,Alu
chr10	75009781	T	C	9.15447E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr1	149943157	G	A	0.00024	OTUD7B	-	FALSE
chr1	67874731	T	C	0.00145	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	10520683	T	C	0.00457	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	29041856	A	G	0.00756	GMEB1	+	TRUE	AluSq4	SINE,Alu
chr4	5743512	T	C	0.00210	EVC	+	FALSE
chr2	24225006	A	G	0.00141		.	FALSE	AluSx	SINE,Alu
chr2	121979980	G	A	0.00525	TFCP2L1	-	FALSE	L1MB8	SINE,Alu
chr1	150619971	G	A	0.00126	GOLPH3L	-	FALSE	AluJo	SINE,Alu
chr2	224621887	T	C	0.00373	AP1S3	-	FALSE	AluSc	SINE,Alu
chr5	79277950	C	A	0.00037	MTX3	-	FALSE	(AC)n	SINE,Alu
chr4	83406544	C	T	0.00328	TMEM150C	-	FALSE
chr1	204526631	A	G	0.00536	MDM4	+	TRUE	AluSx	SINE,Alu
chr3	45722396	A	G	0.00337	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	36067817	T	C	0.00120	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	205687213	T	A	0.00950	NUCKS1	-	FALSE
chr1	168220427	A	G	0.00670		.	FALSE	AluSz6	SINE,Alu
chr6	74303531	T	C	0.00487	SLC17A5	-	TRUE	AluJr	SINE,Alu
chr1	16011005	G	C	0.00616	PLEKHM2	+	FALSE	(GCG)n	SINE,Alu
chr2	37330611	T	C	0.00629		.	FALSE	AluSq2	SINE,Alu
chr1	145293515	A	G	0.00885	NBPF20,NBPF10	+	FALSE
chr9	111779229	T	C	0.00269	TMEM245	-	FALSE
chr4	17802919	T	C	0.00857	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	161488401	T	A	0.00622	FCGR2A	+	FALSE
chr5	125961649	A	G	3.29658E-05	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	10518688	T	C	0.00154		.	FALSE	AluSx1	SINE,Alu
chr3	88103602	C	A	0.00284	CGGBP1	-	FALSE
chr2	176791182	T	C	0.00015	LNPK	-	TRUE	MSTD	SINE,Alu
chr4	10442610	T	C	0.00174	ZNF518B	-	FALSE
chr1	16932594	T	C	0.00064	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	990773	C	T	0.00486	AGRN	+	FALSE
chr4	16040617	C	T	0.00032	PROM1	-	FALSE
chr1	145369709	A	G	0.00258	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr16	10625101	T	C	0.00804	EMP2	-	TRUE	AluSx3	SINE,Alu
chr19	19793168	A	G	0.00481	ZNF101	+	TRUE	AluSz	SINE,Alu
chr6	158613395	C	A	0.00031	GTF2H5	+	FALSE
chr1	54355105	A	G	0.00398	YIPF1	-	FALSE	MIRb	SINE,Alu
chr12	93192790	G	T	0.00161	EEA1	-	FALSE
chr1	207942535	A	G	0.00102	CD46	+	TRUE	AluSg4	SINE,Alu
chr6	54805688	A	C	0.00220	FAM83B	+	FALSE
chr1	146643580	G	A	0.00113	PRKAB2	-	FALSE
chr2	220037666	A	G	0.00796	CNPPD1	-	FALSE
chr11	6411935	T	C	0.00905	SMPD1	+	FALSE	(CTGGCG)n	SINE,Alu
chr1	9163110	T	C	0.00103		.	FALSE	FRAM	SINE,Alu
chr1	146650289	C	T	0.00024	PDIA3P1	+	FALSE
chr4	57326291	A	G	0.00549	PAICS	+	TRUE	AluJr	SINE,Alu
chr3	181430334	G	A	0.00305	SOX2-OT,SOX2	+	FALSE
chr1	227071525	C	T	0.00013	PSEN2	+	FALSE
chr2	17962998	T	A	0.01000	GEN1	+	FALSE
chr1	44071221	G	A	0.00105	PTPRF	+	FALSE
chr3	73115126	A	T	0.00228	PPP4R2	+	FALSE
chr1	67874849	T	C	0.00169	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	114940216	T	G	0.00207	TRIM33	-	FALSE	(T)n	SINE,Alu
chr2	9661424	G	C	0.00130	ADAM17	-	FALSE
chr3	10193797	A	G	0.00199	VHL	+	TRUE	AluSx	SINE,Alu
chr1	11347152	A	T	0.00295	UBIAD1	+	FALSE
chr1	150939883	A	G	0.00472	CERS2	-	FALSE
chr3	113528892	A	T	8.78648E-05	ATP6V1A	+	FALSE	AluSp	SINE,Alu
chr1	70611296	A	T	0.00061	LRRC40	-	FALSE
chr3	194309210	G	A	0.00317	TMEM44-AS1,TMEM44	+,-	FALSE
chr1	17199803	C	T	0.00997	LOC440570	+	FALSE
chr1	93617546	T	C	0.00026	TMED5	-	FALSE
chr4	57326156	A	G	0.00170	PAICS	+	TRUE	AluJr	SINE,Alu
chr3	126156660	C	G	0.00182	ZXDC	-	FALSE
chr1	145500925	T	A	0.00997	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	156878044	G	A	9.48586E-05	PEAR1	+	FALSE
chr2	131906031	C	T	0.00439	PLEKHB2	+	FALSE
chr1	160062340	G	A	0.00967	IGSF8	-	FALSE
chr5	121362874	A	G	0.00022	SRFBP1	+	TRUE	FRAM	SINE,Alu
chr1	10517623	T	C	0.00664		.	FALSE	AluSx1	SINE,Alu
chr2	128952075	A	G	0.00919	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	19586532	A	G	7.13982E-05	MRTO4	+	TRUE	AluSz	SINE,Alu
chr7	156764972	G	A	0.00871	NOM1	+	FALSE
chr3	194349178	C	T	0.00881	TMEM44	-	FALSE
chr4	88059663	G	T	0.00165	AFF1	+	FALSE	(GT)n	SINE,Alu
chr20	35410314	T	C	0.00602	SOGA1	-	TRUE	AluSz	SINE,Alu
chr16	48388258	A	G	8.02686E-05	MIR5095	+	TRUE	AluSz	SINE,Alu
chr1	40306898	T	C	9.21891E-07	TRIT1	-	FALSE
chr1	92862836	A	G	0.00430		.	FALSE	AluJr	SINE,Alu
chr2	61369774	T	C	0.00267	LOC339803	-	TRUE	AluSx	SINE,Alu
chr5	79922263	T	G	0.00913	DHFR	-	FALSE	HAL1	SINE,Alu
chr1	156564726	T	C	0.00995	GPATCH4	-	FALSE
chr5	179048585	T	C	0.00150	HNRNPH1	-	FALSE
chr1	6582689	T	C	4.44823E-05	NOL9	-	TRUE	AluSg	SINE,Alu
chr2	206986233	T	C	0.00491		.	FALSE	AluSz	SINE,Alu
chr9	127711532	T	C	0.00018	SCAI	-	TRUE	AluSp	SINE,Alu
chr1	17395521	G	A	0.00788	PADI2	-	FALSE
chr1	160920966	C	T	0.00980	ITLN2	-	FALSE
chr1	116238056	G	A	0.00014	VANGL1	+	FALSE
chr1	197070442	G	T	0.00468	ASPM	-	FALSE
chr2	99813003	A	G	2.46688E-05	MRPL30	+	TRUE	AluJb	SINE,Alu
chr4	7060935	G	C	0.00543	GRPEL1	-	FALSE	Tigger4a	SINE,Alu
chr5	149013844	T	A	0.00366	ARHGEF37	+	FALSE
chr1	144619903	T	A	0.00712	NBPF20,NBPF9	+	FALSE
chr1	6704652	C	T	0.00000	DNAJC11	-	FALSE
chr1	145290874	C	T	0.00380	NBPF20	+	FALSE
chr1	40435513	C	A	0.00656	MFSD2A	+	FALSE
chr8	30536078	T	C	0.00509	GSR	-	FALSE	AluJr	SINE,Alu
chr7	6501820	A	T	0.00531	KDELR2	-	FALSE
chr1	10520117	T	C	0.00188		.	FALSE	AluSx	SINE,Alu
chr12	125269475	T	C	0.00184	SCARB1	-	FALSE
chr12	72096335	A	G	1.07858E-05	TMEM19	+	FALSE	AluSz6	SINE,Alu
chr1	6614230	G	A	0.00509	NOL9	-	FALSE
chr20	279774	A	C	0.00056	ZCCHC3	+	FALSE	L2b	SINE,Alu
chr16	58195430	G	C	0.00325	CSNK2A2	-	FALSE	(AC)n	SINE,Alu
chr2	99812289	A	G	0.00040	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	197053373	G	A	0.00124	ASPM	-	FALSE
chr1	1634860	G	T	0.00103	CDK11B,CDK11A	-	FALSE
chr2	206983087	T	C	0.00364		.	FALSE	AluJb	SINE,Alu
chr15	49419124	T	C	1.84263E-05	COPS2	-	TRUE	MARNA	SINE,Alu
chr6	111588769	A	G	2.24603E-05	MFSD4B	+	TRUE	AluYm1	SINE,Alu
chr15	41590839	A	G	0.00344	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr2	135208354	A	T	0.00249	MGAT5	+	FALSE
chr1	152884247	A	G	0.00642	IVL	+	FALSE
chr1	118071289	A	G	0.00023		.	FALSE
chr1	120163520	T	C	0.00017	ZNF697	-	FALSE
chr17	49042388	T	C	2.65954E-10	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	19542464	T	C	0.00736	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	155282600	A	G	0.00019	FDPS	+	TRUE	AluSp	SINE,Alu
chr3	47386059	T	C	9.15846E-06	KLHL18	+	FALSE
chr7	130629624	T	C	0.00568	LINC-PINT	-	TRUE
chr7	38764358	T	C	0.00675	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	1662694	T	C	0.00398	SLC35E2	-	TRUE	AluY	SINE,Alu
chr2	201774341	T	C	0.00010		.	FALSE	AluSz	SINE,Alu
chr1	19199221	C	T	0.00676	ALDH4A1	-	FALSE
chr2	99813020	A	G	0.00015	MRPL30	+	TRUE	AluJb	SINE,Alu
chr15	90820104	A	G	4.84304E-05		.	FALSE	AluY	SINE,Alu
chr4	89181456	T	C	0.00024	PPM1K	-	TRUE	AluSx1	SINE,Alu
chr7	91630345	G	A	0.00473	AKAP9	+	FALSE
chr1	152187183	C	A	0.00373	HRNR	-	FALSE
chr17	73885248	T	C	0.00017	TRIM65	-	TRUE	AluSg	SINE,Alu
chr10	60157509	T	G	0.00296	TFAM	+	FALSE
chr1	53291382	A	G	0.00114	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	19542305	T	C	0.00085	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr11	86646405	C	A	9.05139E-05	PRSS23	+	FALSE	L2b	SINE,Alu
chr1	153907287	G	C	0.00122	DENND4B	-	FALSE	(CTG)n	SINE,Alu
chr1	114939633	G	A	0.00188	TRIM33	-	FALSE
chr3	12613866	T	C	0.00043	MKRN2	+	FALSE
chr3	101369192	C	T	0.00014	ZBTB11	-	FALSE
chr5	175811094	C	T	0.00700	NOP16	-	FALSE
chr1	3545199	G	C	0.00188	TPRG1L	+	FALSE
chr1	20976023	T	C	6.30669E-06	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr3	160968914	T	C	0.00305	NMD3	+	FALSE
chr1	40722795	G	A	9.35494E-07		.	FALSE	Charlie2a	SINE,Alu
chr1	168218543	A	G	7.78857E-07		.	FALSE	AluSz	SINE,Alu
chr1	19586519	A	G	0.00239	MRTO4	+	TRUE	AluSz	SINE,Alu
chr16	19715588	T	C	0.00063		.	FALSE	AluSg	SINE,Alu
chr2	43625184	T	A	0.00587	THADA	-	FALSE
chr1	53289547	A	G	0.00505	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	52498140	G	A	0.00044	TXNDC12,KTI12	-	FALSE
chr4	52888499	G	A	8.91315E-05	SGCB	-	FALSE
chr1	10517672	T	C	0.00090		.	FALSE	AluSx1	SINE,Alu
chr2	232319611	A	T	3.84700E-07	NCL	-	FALSE
chr2	37331077	T	C	0.00937		.	FALSE	AluSx1	SINE,Alu
chr4	763539	G	C	0.00816	PCGF3	+	FALSE
chr2	132481526	C	A	0.00040	C2orf27A	+	FALSE
chr3	40503561	A	T	0.00012	RPL14	+	FALSE
chr1	223967953	C	T	0.00341	TP53BP2	-	FALSE
chr12	117467580	A	G	0.00064	FBXW8	+	TRUE	AluSz	SINE,Alu
chr1	169768080	C	A	5.53708E-05	C1orf112	+	FALSE
chr21	33974092	G	C	0.00865	C21orf59	-	FALSE
chr1	40539211	A	T	0.00105	PPT1	-	FALSE
chr1	193054574	G	T	0.00511	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr20	35409827	T	C	0.00267	SOGA1	-	TRUE	AluSx	SINE,Alu
chr1	10517653	T	C	0.00776		.	FALSE	AluSx1	SINE,Alu
chr1	21102501	G	A	0.00148	HP1BP3	-	FALSE
chr2	85776508	A	T	0.00747	GGCX	-	FALSE	AluSz6	SINE,Alu
chr16	67715404	T	C	0.00102	GFOD2	-	TRUE	AluSz	SINE,Alu
chr8	101932094	T	A	0.00288	YWHAZ	-	FALSE	MER34B-int	SINE,Alu
chr19	23542157	T	C	0.00140	ZNF91	-	TRUE	AluY	SINE,Alu
chr1	148556753	G	A	0.00472		.	FALSE
chr5	40832553	A	T	9.00390E-07	RPL37	-	FALSE
chr1	109465174	A	C	0.00234	GPSM2	+	FALSE
chr1	100489996	A	G	0.00069	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr4	3242100	G	A	0.00916	HTT	+	FALSE
chr1	19953131	G	A	0.00486	MINOS1,MINOS1-NBL1	+	FALSE
chr3	8922054	T	C	0.00300	RAD18	-	FALSE
chr2	71412707	G	A	0.00305	PAIP2B	-	FALSE	AluJr	SINE,Alu
chr1	27205632	T	C	0.00471		.	FALSE	FLAM_A	SINE,Alu
chr1	145283980	C	T	0.00113	NBPF20,NOTCH2NL	+	FALSE
chr1	180991777	T	C	0.00629	STX6	-	FALSE
chr21	34728095	A	G	8.47848E-05	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr1	85785107	T	C	4.02203E-05	DDAH1	-	FALSE
chr1	52306079	T	A	0.00033	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	16889413	T	C	0.00016	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	179327008	A	G	0.00168	SOAT1	+	TRUE
chr1	89518120	A	G	0.00453	GBP1	-	FALSE
chr14	65400786	T	G	0.00077	CHURC1-FNTB,CHURC1	+	FALSE	AluSx	SINE,Alu
chr7	129251289	C	T	0.00808		.	FALSE
chr20	43996145	T	A	0.00611	SYS1-DBNDD2,SYS1	+	FALSE
chr3	179117033	T	C	0.00019	GNB4	-	TRUE	AluSz	SINE,Alu
chr1	10520331	C	T	0.00527		.	FALSE	AluSx1	SINE,Alu
chr2	70131584	G	A	0.00366	SNRNP27	+	FALSE
chr1	79109353	G	T	0.00214	IFI44L	+	FALSE	LTR26	SINE,Alu
chr5	44818826	G	A	0.00595		.	FALSE
chr1	32697109	A	G	0.00015	EIF3I	+	FALSE	AluSp	SINE,Alu
chr19	21302035	A	G	5.57890E-05	ZNF714	+	TRUE	AluSg4	SINE,Alu
chr1	46075661	A	G	0.00071	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	86252214	T	C	0.00930	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	214524129	T	C	0.00052	PTPN14	-	TRUE	AluSx	SINE,Alu
chr3	196077460	G	T	0.00416		.	FALSE
chr9	130268407	C	G	0.00902	FAM129B	-	FALSE	(CTCA)n	SINE,Alu
chr1	113248365	A	G	0.00252	RHOC	-	FALSE
chr4	2940243	T	A	0.00028	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr2	91847976	C	T	0.00010		.	FALSE	TAR1	SINE,Alu
chr1	10521200	T	C	0.00096	DFFA	-	TRUE	AluY	SINE,Alu
chr4	169299528	T	C	0.00745	DDX60L	-	FALSE
chr5	149829072	G	T	0.00816	RPS14	-	FALSE
chr4	2517223	A	G	2.74855E-08	RNF4	+	FALSE
chr6	32147696	G	A	6.22517E-06		.	FALSE
chr3	197612430	A	G	0.00095		.	FALSE	AluSp	SINE,Alu
chr1	1255400	T	C	0.00224	CPSF3L	-	FALSE
chr1	19543352	T	C	0.00086	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr14	31916927	T	C	1.57126E-05	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr8	143413136	C	T	0.00267	TSNARE1	-	FALSE
chr5	93018903	T	A	5.97109E-08	FAM172A	-	FALSE	(TCA)n	SINE,Alu
chr12	98942695	A	G	0.00204	TMPO	+	TRUE	AluSc	SINE,Alu
chr3	47036756	C	G	0.00091	NBEAL2	+	FALSE
chr3	72426059	T	A	0.00417	RYBP	-	FALSE
chr1	16841972	G	A	1.76809E-05		.	FALSE	MER41E	SINE,Alu
chr1	155230131	C	T	0.00829	SCAMP3	-	FALSE
chr1	26226610	C	T	0.00955	STMN1	-	FALSE
chr14	23441380	T	C	0.00102	AJUBA	-	TRUE	Eutr2	SINE,Alu
chr6	56972883	T	C	0.00939	ZNF451	+	FALSE	AluY	SINE,Alu
chr1	159946779	G	A	0.00019	LINC01133	+	FALSE	(GAAA)n	SINE,Alu
chr1	63924020	C	T	0.00139	ITGB3BP	-	FALSE
chr2	118854086	G	C	0.00066	INSIG2	+	FALSE
chr7	74169234	G	T	8.95897E-05	GTF2I	+	FALSE
chr1	45241587	G	A	0.00248	RPS8,SNORD55	+	FALSE
chr1	11979809	A	C	0.00744	KIAA2013	-	FALSE
chr1	40214313	A	G	0.00330	PPIE	+	TRUE	AluSq2	SINE,Alu
chr1	89570148	A	G	0.00084		.	FALSE
chr12	125513788	A	G	0.00592		.	FALSE	AluSx1	SINE,Alu
chr7	6048973	C	A	8.39369E-05	AIMP2	+	FALSE
chr6	74346347	A	G	4.16931E-07	SLC17A5	-	FALSE
chr1	19542458	T	C	0.00113	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	197611095	A	G	0.00694		.	FALSE	AluSx1	SINE,Alu
chr5	151041871	C	A	0.00165	SPARC	-	FALSE
chr9	116812614	A	G	0.00674	ZNF618	+	FALSE
chr1	19655758	T	A	0.00044	PQLC2	+	FALSE	AluSz	SINE,Alu
chr1	149581854	C	A	0.00175	LINC00623,LINC00869,LOC103091866	+	FALSE	L2b	SINE,Alu
chr3	191115082	G	C	0.00980	CCDC50	+	FALSE
chr1	36067749	T	C	0.00748	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	197004439	A	G	0.00034	STK17B	-	FALSE
chr1	205737665	G	T	0.00025	RAB29	-	FALSE	AluSq2	SINE,Alu
chr16	19715518	T	C	0.00502		.	FALSE	AluSg	SINE,Alu
chr1	205687344	C	T	0.00633	NUCKS1	-	FALSE	(T)n	SINE,Alu

RBP	FMR1
Knock-Method	shRNA
RBP Family	FXMRP1_C_core
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR905HID
Platform	HiSeq
Pubmed ID	32252787

FMR1 - Target Gene Network