RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr4	56236845	A	G	6.76031E-06	SRD5A3,SRD5A3-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	16890428	T	A	1.76753E-05	NBPF1	-	FALSE
chr1	9163393	T	C	0.00327		.	FALSE	AluSp	SINE,Alu
chr1	46075709	A	G	0.00431	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	180063334	G	A	2.71425E-05	CEP350	+	FALSE
chr2	37329300	T	C	0.00590		.	FALSE	AluJr4	SINE,Alu
chr5	40832551	A	T	5.78892E-08	RPL37	-	FALSE
chr1	54692341	T	C	0.00045	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	20978294	T	A	0.00985	PINK1-AS,DDOST	-	FALSE
chr5	94050487	T	A	0.00380	MCTP1	-	FALSE
chr5	122165503	A	T	0.00170	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	1419700	A	G	0.00464	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr2	3592602	T	C	0.00232	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr7	64435677	G	A	0.00366	ZNF117	-	FALSE
chr1	16450928	T	C	0.00113	EPHA2	-	FALSE
chr1	155214017	C	A	0.00261	GBA	-	FALSE	AluSx3	SINE,Alu
chr1	19199221	C	T	0.00392	ALDH4A1	-	FALSE
chr5	154194420	G	A	0.00137	LARP1	+	FALSE
chr1	24296869	G	T	0.00505		.	FALSE	AluSg	SINE,Alu
chr1	24798068	C	A	0.00381	NIPAL3	+	FALSE	AluJr	SINE,Alu
chr1	117532790	C	T	0.00981	PTGFRN	+	FALSE
chr1	10520153	T	C	0.00398		.	FALSE	AluSx	SINE,Alu
chr1	179830012	A	C	0.00303	TOR1AIP2	-	FALSE
chr2	11323108	T	A	0.00100	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr1	46828700	A	G	0.00095	NSUN4	+	FALSE
chr1	40147817	C	A	0.00982	HPCAL4	-	FALSE
chr1	17199309	G	A	0.00398	LOC440570	+	FALSE
chr6	13788342	T	C	0.00454	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	206566195	C	T	0.00052	SRGAP2	+	FALSE
chr1	31905905	G	C	0.00028	SERINC2	+	FALSE
chr1	10517623	T	C	8.06723E-05		.	FALSE	AluSx1	SINE,Alu
chr1	6583109	T	C	6.65543E-05	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	40537922	A	G	0.00686	CAP1	+	FALSE	(A)n	SINE,Alu
chr5	118175329	T	C	2.47285E-05	DTWD2	-	TRUE	AluJr	SINE,Alu
chr2	37330517	T	C	0.00324		.	FALSE	AluSq2	SINE,Alu
chr8	11700676	T	C	0.00534	CTSB	-	TRUE	AluSg	SINE,Alu
chr2	37331525	T	C	0.00479		.	FALSE	AluJb	SINE,Alu
chr1	46075188	C	A	0.00199	NASP	+	FALSE	A-rich	SINE,Alu
chr1	153907297	C	T	3.91411E-05	DENND4B	-	FALSE	(CTG)n	SINE,Alu
chr1	35319605	A	C	0.00226	SMIM12	-	FALSE	AluSg	SINE,Alu
chr1	148251814	T	A	0.00353	NBPF8,NBPF14,NBPF9	-	FALSE
chr11	94801640	A	C	0.00790	SRSF8	+	FALSE
chr1	181026558	G	A	0.00217	MR1	+	FALSE
chr1	9643873	A	G	0.00064		.	FALSE	AluY	SINE,Alu
chr1	145511958	A	G	0.00038	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	100549715	T	A	0.00765	SASS6	-	FALSE
chr3	139086995	C	A	0.00743	COPB2	-	FALSE
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr1	144931392	G	A	0.00172	NBPF20,PDE4DIP	+,-	FALSE
chr1	33148736	A	G	0.00849	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr4	2940164	T	C	0.00381	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr17	65334886	T	C	8.05380E-09	PSMD12	-	TRUE	AluSq	SINE,Alu
chr2	69688897	T	C	0.00888	AAK1	-	TRUE	AluSq2	SINE,Alu
chr1	38326700	T	C	5.61462E-05	INPP5B	-	TRUE	AluJr	SINE,Alu
chr3	49067295	C	A	0.00740	QRICH1	-	FALSE
chr1	28661656	A	G	0.00031	MED18	+	TRUE	AluSg	SINE,Alu
chr1	53359181	A	G	0.00699	ZYG11A	+	TRUE	AluSx	SINE,Alu
chr12	98943149	A	G	0.00019	TMPO	+	TRUE	AluSz	SINE,Alu
chr17	5288082	A	G	0.00184	RABEP1	+	TRUE
chr3	73431830	A	G	0.00157	PDZRN3	-	FALSE
chr5	49692633	T	G	0.00808	EMB	-	FALSE
chr2	201774341	T	C	0.00010		.	FALSE	AluSz	SINE,Alu
chr2	86364707	G	T	0.00131	PTCD3	+	FALSE
chr5	52397314	C	T	0.00249	MOCS2	-	FALSE
chrX	3526658	A	T	0.00152	PRKX	-	FALSE	(AC)n	SINE,Alu
chr2	206980072	G	A	1.35396E-05		.	FALSE	MLT1A1	SINE,Alu
chr19	42376702	A	G	6.18708E-08		.	FALSE	AluSp	SINE,Alu
chr2	179368982	A	C	0.00530	MIR548N,PLEKHA3	+	FALSE
chr8	144357992	A	G	0.00780	GLI4	+	FALSE
chr1	6283264	T	C	0.00521	ICMT	-	TRUE	AluSx3	SINE,Alu
chrX	77083641	T	C	0.00055	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	21806710	T	G	0.00194	NBPF3	+	FALSE
chr1	206566948	G	A	0.00879	SRGAP2	+	FALSE
chr5	175802154	C	T	0.00883		.	FALSE	(CATC)n	SINE,Alu
chr1	29644328	C	T	0.00014	PTPRU	+	FALSE
chr8	25272446	A	T	0.00405	DOCK5	+	FALSE
chr17	36104904	A	G	0.00442	HNF1B	-	FALSE	G-rich	SINE,Alu
chr20	54963756	T	C	0.00476	AURKA	-	TRUE	AluSq10	SINE,Alu
chr1	109475706	T	C	0.00375	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr3	176739404	A	G	7.21134E-06	TBL1XR1	-	FALSE
chr1	12058869	C	T	0.00027	MFN2	+	FALSE
chr1	183486859	G	A	0.00831	SMG7	+	FALSE
chr17	1684352	T	C	0.00793	SMYD4	-	TRUE	AluSx1	SINE,Alu
chr3	120114953	G	A	0.00373	FSTL1	-	FALSE
chr12	98942904	A	G	0.00259	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	220310158	A	C	0.00159	IARS2	+	FALSE
chr3	45267310	C	T	0.00038	TMEM158	-	FALSE
chr1	45973928	G	A	0.00093	MMACHC	+	FALSE
chr1	143135063	C	A	0.00397	LOC102723769	-	FALSE
chr1	1622754	A	G	0.00221	CDK11B,SLC35E2B	-	FALSE	MLT1F2	SINE,Alu
chr1	53289873	A	G	0.00013	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	160966301	T	C	7.77749E-07	F11R	-	TRUE	AluSg	SINE,Alu
chr8	101932094	T	A	0.00288	YWHAZ	-	FALSE	MER34B-int	SINE,Alu
chr9	28607	T	C	0.00146	WASH1	-	FALSE
chr5	96498783	G	A	0.00056	RIOK2	-	FALSE
chr1	47844500	T	G	0.00169	CMPK1	+	FALSE
chr5	176916516	C	T	0.00093	PDLIM7	-	FALSE
chr1	150448374	T	A	0.00607	RPRD2	+	FALSE
chr3	183209036	T	C	1.78981E-05	KLHL6	-	TRUE	AluSq	SINE,Alu
chr7	17384440	A	G	0.00373	AHR	+	TRUE	AluSx	SINE,Alu
chr2	37331065	T	C	0.00585		.	FALSE	AluSx1	SINE,Alu
chr1	53679610	G	A	0.00119	CPT2	+	FALSE	AluSz	SINE,Alu
chr19	46052975	T	C	0.00652	OPA3	-	TRUE	AluSz6	SINE,Alu
chr2	172179003	T	C	0.00192	METTL8	-	TRUE	AluY	SINE,Alu
chr1	205684067	T	C	0.00499	NUCKS1	-	FALSE
chr15	91044387	T	G	0.00077	IQGAP1	+	FALSE
chr5	126889370	C	T	0.00713	PRRC1	+	FALSE
chr2	9770610	A	G	0.00466	YWHAQ	-	FALSE
chr2	76672504	A	G	2.97414E-06		.	FALSE	7SK	SINE,Alu
chr9	19376252	A	T	0.00367		.	FALSE
chr1	229652587	T	C	0.00732	ABCB10	-	FALSE
chr1	45187511	T	C	7.71832E-06	C1orf228	+	FALSE	U5	SINE,Alu
chr1	16933135	G	T	2.86961E-06	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	36068237	T	C	0.00075	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	1169973	G	A	0.00783	B3GALT6	+	FALSE
chr1	203277243	G	T	1.60795E-05	BTG2	+	FALSE
chr20	25428669	A	G	0.00023	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	15992470	G	A	0.00605		.	FALSE
chr2	131906031	C	T	0.00439	PLEKHB2	+	FALSE
chr7	6442891	G	A	0.00134	RAC1	+	FALSE
chr1	11710798	T	G	0.00328	FBXO2	-	FALSE	(CCT)n	SINE,Alu
chr1	95660019	G	T	0.00052	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	113672616	A	G	0.00450		.	FALSE	AluJb	SINE,Alu
chr3	195963397	G	A	0.00037		.	FALSE
chr4	10076658	T	C	6.66134E-16	WDR1	-	FALSE
chr1	228881190	T	G	0.00043	RHOU	+	FALSE
chr10	112596282	C	T	0.00885	RBM20	+	FALSE
chr4	57327058	A	G	0.00129	PAICS	+	TRUE	AluSx1	SINE,Alu
chr3	197682723	T	A	0.00686	IQCG	-	FALSE
chrX	135300092	T	C	0.00075	MAP7D3	-	TRUE	AluSz	SINE,Alu
chr12	49745425	A	G	0.00489	DNAJC22	+	TRUE	AluSx3	SINE,Alu
chr1	224380757	A	G	0.00618	DEGS1	+	FALSE	AluSx	SINE,Alu
chr1	160967855	T	C	0.00548	F11R	-	TRUE	AluSp	SINE,Alu
chr7	6064015	A	T	0.00746	EIF2AK1	-	FALSE
chr1	47767914	G	A	0.00636	STIL	-	FALSE
chr1	52306075	T	C	0.00135	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	145689491	A	G	0.00701	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	6583593	T	C	0.00088	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	36068231	T	C	9.19439E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	40537944	C	A	2.58277E-05	CAP1	+	FALSE
chr1	207247476	T	G	0.00576	PFKFB2	+	FALSE	MER5B	SINE,Alu
chr1	145369480	A	G	7.08400E-07	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr3	49395693	C	G	0.00243	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr7	35737649	G	A	0.00566	LOC101930085	+	FALSE	AluSz	SINE,Alu
chr1	17394775	G	A	0.00103	PADI2	-	FALSE
chr3	45721874	A	G	0.00296	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	72403402	C	A	0.00108	EXOC6B	-	FALSE	GA-rich	SINE,Alu
chr6	44417835	A	G	8.27091E-07	CDC5L	+	TRUE	AluSx	SINE,Alu
chr1	160062340	G	A	0.00967	IGSF8	-	FALSE
chr1	77759578	A	G	4.05543E-05	AK5	+	FALSE
chr3	183890097	G	A	1.43668E-06	DVL3	+	FALSE
chr1	39471000	G	A	0.00518	AKIRIN1	+	FALSE
chr3	98518160	T	A	0.00197	DCBLD2	-	FALSE
chr15	65442506	T	C	0.00088	CLPX	-	TRUE	AluSg4	SINE,Alu
chr1	118069696	T	C	0.00170		.	FALSE
chr6	33377511	T	C	5.31992E-06		.	FALSE	(TG)n	SINE,Alu
chr2	201774279	T	C	9.55391E-05		.	FALSE	AluSz	SINE,Alu
chr12	133298025	A	G	6.18330E-06	PGAM5	+	TRUE	AluJo	SINE,Alu
chr8	11701343	T	C	0.00280	CTSB	-	TRUE	AluSx1	SINE,Alu
chr6	74134673	T	C	0.00340		.	FALSE	AluSz	SINE,Alu
chr1	19934893	C	A	0.00171	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr2	75882576	T	C	0.00328	MRPL19	+	FALSE
chr4	177241194	C	T	6.44832E-08	SPCS3	+	FALSE
chr5	6633042	C	T	0.00348	NSUN2	-	FALSE
chr2	37331221	T	C	1.68149E-05		.	FALSE	AluSx1	SINE,Alu
chr3	136573440	A	G	0.00038	NCK1-AS1,SLC35G2	+,-	FALSE
chr6	42855962	A	G	0.00781	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	53366673	A	G	0.00243	ECHDC2	-	FALSE	AluJb	SINE,Alu
chr8	12879707	T	G	0.00780	KIAA1456	+	FALSE
chr1	117644949	C	G	0.00862	TTF2	+	FALSE
chr3	52288945	T	C	3.51556E-07	WDR82	-	FALSE
chr10	98281480	T	A	0.00620	TM9SF3	-	FALSE
chr3	141164940	C	A	0.00194	ZBTB38	+	FALSE
chr16	19725719	C	T	0.00471	KNOP1	-	FALSE
chr6	34249357	T	A	0.00373		.	FALSE
chr1	201438098	T	G	2.75480E-05	PHLDA3	-	FALSE
chr8	117858600	T	A	0.00015	RAD21	-	FALSE
chr1	52381354	G	T	0.00157	RAB3B	-	FALSE
chr7	16823610	T	G	0.00765	TSPAN13	+	FALSE
chr1	7833544	T	C	0.00186	VAMP3	+	FALSE
chr1	93804952	G	A	0.00421	CCDC18-AS1	-	FALSE
chr3	169807548	T	C	0.00665	PHC3	-	TRUE	AluSx1	SINE,Alu
chr3	14986080	T	C	4.44089E-16	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr3	75779644	C	A	0.00177	ZNF717	-	FALSE
chr1	19934879	T	C	0.00454	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	36068281	T	C	0.00026	PSMB2	-	TRUE	AluSc	SINE,Alu
chr6	74133990	T	C	0.00201		.	FALSE	AluY	SINE,Alu
chr1	120839682	A	G	0.00073	FAM72B	+	FALSE
chr19	11257644	T	C	0.00991	SPC24	-	TRUE	AluSp	SINE,Alu
chr13	31033317	C	T	0.00254	HMGB1	-	FALSE
chr11	31452750	A	G	0.00326	DNAJC24	+	TRUE	AluSx1	SINE,Alu
chr3	42591046	C	A	0.00933	SEC22C	-	FALSE
chr1	40539211	A	T	0.00105	PPT1	-	FALSE
chr6	150046484	T	C	0.00953	NUP43	-	TRUE	AluSq2	SINE,Alu
chr2	26613949	A	G	0.00669	EPT1	+	FALSE
chr2	37330612	T	C	0.00136		.	FALSE	AluSq2	SINE,Alu
chr16	5134599	G	C	0.00355	ALG1,EEF2KMT	+,-	FALSE
chr7	2473747	A	G	0.00872	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr12	56532056	G	C	0.00743	ESYT1	+	FALSE
chr1	36067752	T	C	0.00031	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	1344757	A	G	0.00024		.	FALSE	AluSx1	SINE,Alu
chr6	105546950	T	C	0.00443	BVES	-	TRUE	AluJb	SINE,Alu
chr1	16576290	G	A	0.00104	FBXO42	-	FALSE	A-rich	SINE,Alu
chr2	187544234	C	T	0.00078	ITGAV	+	FALSE
chr1	1607574	C	T	0.00187	CDK11B,SLC35E2B	-	FALSE
chr1	19244904	G	A	0.00487	IFFO2	-	FALSE
chr1	205686520	A	G	0.00980	NUCKS1	-	FALSE
chr1	145512073	A	G	0.00131	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	244219904	T	G	0.00482	ZBTB18	+	FALSE
chr1	6282334	T	C	0.00408	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	154128333	T	A	0.00204	TPM3	-	FALSE
chr6	74133914	T	C	0.00014		.	FALSE	AluY	SINE,Alu
chr1	28826118	A	G	0.00948	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr3	170114078	A	C	0.00219	SKIL	+	FALSE
chr1	1419888	A	G	0.00630	ATAD3B	+	TRUE	AluSp	SINE,Alu
chr6	57034840	T	G	0.00581	ZNF451,LOC101927211	+,-	FALSE
chr1	10521238	T	C	0.00597	DFFA	-	TRUE	AluY	SINE,Alu
chr16	10623525	T	C	8.96209E-06	EMP2	-	TRUE	AluSp	SINE,Alu
chr2	70506338	C	T	0.00026	PCYOX1	+	FALSE
chr17	80347528	T	C	0.00048	OGFOD3	-	TRUE	AluJb	SINE,Alu
chr3	122283293	C	G	0.00071	DTX3L,PARP9	+,-	FALSE
chr14	23441380	T	C	0.00102	AJUBA	-	TRUE	Eutr2	SINE,Alu
chr1	145281633	C	A	0.00059	NBPF20,NOTCH2NL	+	FALSE
chr6	35259646	G	C	0.00808	ZNF76	+	FALSE
chr8	145159708	A	G	0.00101	MAF1	+	FALSE
chr1	36067925	T	C	3.39837E-06	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	118066459	A	G	1.18146E-05	MAN1A2	+	FALSE
chr4	2841802	A	G	0.00016	SH3BP2	+	TRUE	AluJb	SINE,Alu
chr1	117532372	G	T	0.00678	PTGFRN	+	FALSE
chr6	3022725	T	C	0.00081	HTATSF1P2	-	TRUE	AluSz	SINE,Alu
chr7	94060360	T	G	0.00014	COL1A2	+	FALSE
chr15	33063527	C	T	0.00183	FMN1	-	FALSE	AluYk3	SINE,Alu
chr2	128602462	T	C	0.00298		.	FALSE	AluSq2	SINE,Alu
chr1	10517276	T	C	0.00079		.	FALSE	AluJr	SINE,Alu
chr14	23300663	G	A	0.00120	MRPL52	+	FALSE	MIRb	SINE,Alu
chr2	85776987	T	A	0.00059	GGCX	-	FALSE
chr1	87209658	G	A	0.00219	SH3GLB1	+	FALSE
chr1	26608014	C	A	1.07737E-06		.	FALSE
chr1	173457945	G	A	0.00287	PRDX6	+	FALSE
chr4	53364	G	A	0.00714	ZNF718,ZNF595	+	FALSE
chr4	153898316	A	G	0.00312	FHDC1	+	TRUE	AluJo	SINE,Alu
chr1	16927039	C	T	0.00040	NBPF1	-	FALSE
chr1	220231959	T	C	0.00028	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr14	53109677	T	C	5.62031E-05	ERO1A	-	FALSE
chr19	57818376	A	G	0.00031		.	FALSE	AluJr	SINE,Alu
chr7	22984967	A	G	0.00108	FAM126A	-	FALSE
chr1	32687475	T	C	0.00785	TMEM234,EIF3I	+,-	FALSE
chr20	18468339	T	C	0.00062	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	15993514	C	T	6.34808E-08		.	FALSE	AluSx4	SINE,Alu
chr3	148748339	G	T	0.00666	HLTF	-	FALSE
chr13	47345467	G	T	0.00495	ESD	-	FALSE
chr7	65618870	A	G	0.00097	CRCP	+	TRUE	AluSx3	SINE,Alu
chr1	1344749	A	G	0.00307		.	FALSE	AluSx1	SINE,Alu
chr1	206635244	T	A	0.00195	SRGAP2	+	FALSE
chr1	9989022	A	G	0.00616	LZIC	-	FALSE	L1MB5	SINE,Alu
chr4	39551167	T	C	0.00031	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr4	185309400	T	A	0.00250	IRF2	-	FALSE	(GGGAT)n	SINE,Alu
chr12	56510697	G	A	0.00055	RPL41	+	FALSE
chr2	61276758	A	G	0.00924	PEX13	+	TRUE	AluSp	SINE,Alu
chr9	125609940	T	A	0.00044		.	FALSE
chr1	144852203	T	G	0.00518	NBPF20,PDE4DIP	+,-	FALSE
chr11	63394020	A	T	0.00175	ATL3	-	FALSE
chr8	62626962	C	T	0.00823	ASPH	-	FALSE
chr1	144599819	C	T	0.00682	NBPF20	+	FALSE
chr14	50361171	C	T	0.00017	ARF6	+	FALSE	(T)n	SINE,Alu
chr1	33071096	A	G	0.00692	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr11	119533726	A	G	0.00169	NECTIN1	-	FALSE
chr1	201846675	C	T	0.00145	IPO9	+	FALSE
chr2	68402797	T	A	0.00656	PNO1	+	FALSE
chr3	12598618	C	T	0.00812	MKRN2	+	FALSE
chr1	16912014	A	C	0.00704	NBPF1	-	FALSE
chr7	143003517	T	A	0.00251	CASP2	+	FALSE	AluY	SINE,Alu
chr1	184761350	T	C	0.00754	FAM129A	-	TRUE	AluJo	SINE,Alu
chr3	195243012	A	C	0.00128	PPP1R2	-	FALSE
chr1	175161849	G	T	0.00030	KIAA0040	-	FALSE
chr2	20401855	G	A	0.00107	SDC1	-	FALSE
chr1	145513017	A	G	0.00037	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr10	75009720	T	C	0.00016	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr2	191745641	G	C	0.00222	GLS	+	FALSE	(GCA)n	SINE,Alu
chr2	176789478	T	C	0.00219	LNPK	-	TRUE	MSTB1	SINE,Alu
chr17	28513176	G	A	0.00996	NSRP1	+	FALSE	AluJr	SINE,Alu
chr6	42856330	A	G	2.22045E-16	RPL7L1	+	TRUE
chr9	117050998	G	A	0.00326	COL27A1	+	FALSE
chr2	32447868	A	G	0.00663	SLC30A6	+	FALSE
chr1	86047210	C	T	0.00201	CYR61	+	FALSE
chr1	38155699	T	G	0.00824	C1orf109	-	FALSE	AluSx1	SINE,Alu
chr1	201975173	G	T	0.00053	RNPEP	+	FALSE
chr19	42375564	A	G	0.00117		.	FALSE	AluSx	SINE,Alu
chr7	94297293	G	T	0.00573	PEG10	+	FALSE
chr1	1597356	G	C	0.00995	CDK11B,SLC35E2B	-	FALSE
chr1	1252723	T	C	7.44553E-05	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr2	10270757	A	T	0.00382	RRM2	+	FALSE
chrM	10307	A	C	0.00046		.	FALSE
chr1	52520864	A	T	0.00041	TXNDC12	-	FALSE
chr1	46075663	A	G	0.00543	NASP	+	TRUE	AluSx4	SINE,Alu
chr19	39433142	T	A	0.00215	FBXO17	-	FALSE	AluJb	SINE,Alu
chr19	21273765	A	G	0.00253	ZNF714	+	FALSE	AluSc	SINE,Alu
chr1	179042905	A	G	0.00034	FAM20B	+	TRUE
chr4	84525973	C	G	0.00148	GPAT3	+	FALSE
chr2	67631831	G	A	0.00423	ETAA1	+	FALSE
chr1	184675814	G	A	0.00730	EDEM3	-	FALSE
chr1	28930023	G	A	0.00037	TAF12	-	FALSE
chr2	206983115	T	C	0.00992		.	FALSE	AluJb	SINE,Alu
chr5	41917695	C	T	0.00546	C5orf51	+	FALSE
chr1	54412181	T	C	0.00524	LRRC42	+	FALSE
chr1	11782935	A	G	0.00067		.	FALSE	AluSx	SINE,Alu
chr1	16890630	T	G	0.00147	NBPF1	-	FALSE
chr1	33149376	A	G	0.00284	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	150241230	G	T	7.51943E-05	APH1A	-	FALSE
chr1	1597403	C	T	0.00033	CDK11B,SLC35E2B	-	FALSE
chr6	31236900	G	A	0.00167		.	FALSE
chr3	196079280	T	C	0.00614		.	FALSE	AluSx	SINE,Alu
chr1	114307293	A	G	0.00499	RSBN1	-	FALSE
chr1	23884661	G	A	0.00205	ID3	-	FALSE
chr3	152555188	G	T	0.00016	P2RY1	+	FALSE
chr1	47141718	T	C	0.00978	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	1152601	A	G	0.00075	SDF4	-	FALSE
chr1	119683390	G	A	0.00283	LOC101929147	+	FALSE
chr1	1337733	A	C	0.00017	MRPL20	-	FALSE
chr1	67874854	T	C	0.00358	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	11181327	C	T	0.00573	MTOR	-	FALSE
chr4	128757345	A	G	0.00040		.	FALSE	AluY	SINE,Alu
chr1	87211940	A	C	0.00164	SH3GLB1	+	FALSE
chr1	154179193	A	T	0.00122	C1orf43	-	FALSE
chr21	18940466	A	T	0.00169	CXADR	+	FALSE	AluY	SINE,Alu
chr3	66430378	T	A	0.00326	LRIG1	-	FALSE
chr1	36067749	T	C	0.00748	PSMB2	-	TRUE	AluSz	SINE,Alu
chr20	25427805	A	G	1.54320E-07	GINS1	+	TRUE	AluSz	SINE,Alu
chr7	100031511	C	T	0.00490	MEPCE	+	FALSE
chr16	10625050	T	C	1.54421E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	184761350	T	C	0.00219	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	32638096	C	T	0.00857	KPNA6	+	FALSE
chr7	17384882	A	G	8.88136E-05	AHR	+	TRUE	AluSc	SINE,Alu
chr1	150597527	T	C	0.00058	ENSA	-	FALSE
chr1	1549354	G	A	0.00383		.	FALSE	HAL1	SINE,Alu
chr10	89623858	G	C	0.00086	PTEN	+	FALSE	(CGG)n	SINE,Alu
chr8	97506373	C	G	0.00579	SDC2	+	FALSE	(CCCCGAG)n	SINE,Alu
chr1	9161090	A	G	0.00068		.	FALSE	AluJb	SINE,Alu
chr1	3730332	T	C	9.76659E-06	CEP104	-	TRUE	AluSx3	SINE,Alu
chr12	52631385	G	C	0.00777	KRT7	+	FALSE
chr3	45721891	A	G	0.00163	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	17739586	G	A	0.00093	RCC2	-	FALSE
chr4	39550978	T	C	0.00558	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr3	101369192	C	T	0.00014	ZBTB11	-	FALSE
chr3	5258280	A	G	4.07938E-08	EDEM1	+	FALSE
chr1	51873951	G	A	0.00591	EPS15	-	FALSE
chr3	47554503	T	G	0.00720	ELP6	-	FALSE	AluSx	SINE,Alu
chr1	16889624	T	C	3.50465E-05	NBPF1	-	TRUE
chr1	117530273	A	G	0.00601	PTGFRN	+	FALSE
chr1	6683578	T	C	0.00497	PHF13	+	FALSE
chr1	40219280	T	C	0.00169	PPIE	+	FALSE
chr1	3371368	C	G	0.00689	ARHGEF16	+	FALSE
chr4	140310370	T	C	0.00335	NAA15	+	FALSE	(T)n	SINE,Alu
chr1	22854702	C	T	4.66415E-11	ZBTB40	+	FALSE
chr3	45721990	A	G	0.00022	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	145513031	A	G	0.00705	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	19953120	G	A	0.00025	MINOS1,MINOS1-NBL1	+	FALSE
chr2	206986926	T	C	0.00478		.	FALSE	AluJr	SINE,Alu
chr6	13788297	T	C	0.00979	MCUR1	-	TRUE	AluSx	SINE,Alu
chr3	196079293	T	C	0.00308		.	FALSE	AluSx	SINE,Alu
chr1	210006603	C	T	0.00829	DIEXF	+	FALSE
chr1	144912233	C	T	0.00066	NBPF20,PDE4DIP	+,-	FALSE
chr14	76045220	T	C	0.00421	LOC102724153,FLVCR2	+,-	FALSE
chr5	149781426	A	G	0.00977	CD74	-	FALSE
chr1	85113229	A	G	0.00080	SSX2IP	-	FALSE
chr1	19665566	A	C	0.00028	CAPZB	-	FALSE
chr3	10193796	A	G	0.00493	VHL	+	TRUE	AluSx	SINE,Alu
chr1	54571491	A	G	0.00538	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr1	10519148	T	C	0.00214		.	FALSE	AluSx3	SINE,Alu
chr1	46751578	T	G	0.00380	LRRC41	-	FALSE
chr2	191745655	C	G	0.00163	GLS	+	FALSE
chr5	139931626	T	G	0.00490	SRA1	-	FALSE
chr1	218617543	G	A	0.00291	TGFB2	+	FALSE
chr2	217366919	A	G	0.00615		.	FALSE	AluSz6	SINE,Alu
chr6	47200348	T	C	0.00274	TNFRSF21	-	FALSE
chr1	155032752	A	G	0.00347	LOC100505666,ADAM15	+,-	FALSE
chr1	75671215	C	T	0.00019	SLC44A5	-	FALSE
chr1	116943511	T	C	0.00236	ATP1A1,ATP1A1-AS1	+,-	FALSE
chr7	116437206	A	G	0.00118	MET	+	FALSE
chr1	145375869	G	A	0.00480	NBPF20,NBPF10	+	FALSE
chr3	58308214	G	A	0.00113		.	FALSE	LTR49	SINE,Alu
chr3	99886662	G	A	0.00011	CMSS1	+	FALSE
chr1	41088377	C	T	2.57179E-08	RIMS3	-	FALSE
chr1	224927968	G	A	0.00695	CNIH3	+	FALSE
chr1	12677547	G	A	0.00015	DHRS3	-	FALSE	(A)n	SINE,Alu
chr1	206566195	C	T	0.00706	SRGAP2	+	FALSE
chr1	6282400	T	C	0.00321	ICMT	-	TRUE	AluSz	SINE,Alu
chr4	2516791	T	G	4.75740E-05	RNF4	+	FALSE
chr3	45721905	A	G	0.00238	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	61921200	A	T	0.00177	NFIA	+	FALSE
chr1	154128831	G	T	0.00183	TPM3	-	FALSE
chr1	9160989	T	C	0.00183		.	FALSE	AluJb	SINE,Alu
chr16	10623666	T	C	1.68352E-07	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	9329105	T	A	0.00233	H6PD	+	FALSE
chr21	34730010	A	G	0.00518	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr9	115446668	T	C	1.81109E-05	INIP	-	TRUE	AluJr	SINE,Alu
chr1	28826085	A	G	0.00212	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	53288862	A	G	0.00503	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr5	130538304	A	G	0.00050	LYRM7	+	TRUE	FAM	SINE,Alu
chr7	6501829	T	A	0.00124	KDELR2	-	FALSE
chr1	15755550	A	C	0.00969	EFHD2	+	FALSE
chr5	180682612	A	T	0.00235	CTC-338M12.4	+	FALSE
chr1	109475635	T	C	0.00458	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	28661633	A	G	0.00053	MED18	+	TRUE	AluSg	SINE,Alu
chr7	66007124	T	C	0.00158	GS1-124K5.11	-	TRUE	AluJo	SINE,Alu
chr1	148004548	T	C	0.00110	NBPF8	-	FALSE
chr1	24288535	A	T	0.00271	PNRC2	+	FALSE
chr1	16890421	G	A	0.00024	NBPF1	-	FALSE
chr12	12796592	A	C	0.00801	CREBL2	+	FALSE
chr1	31732602	C	A	0.00148	SNRNP40	-	FALSE
chr9	132266624	A	G	5.52448E-06	LINC00963	+	TRUE	AluSx	SINE,Alu
chr3	183861243	A	G	0.00049	EIF2B5	+	FALSE
chr4	17803616	T	C	0.00046	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	90478690	A	C	0.00035	ZNF326	+	FALSE
chr2	37327614	T	C	0.00035		.	FALSE
chr4	160279820	C	T	0.00354	RAPGEF2	+	FALSE
chr21	44331718	A	G	0.00410		.	FALSE	AluJb	SINE,Alu
chr1	3545204	C	G	0.00829	TPRG1L	+	FALSE
chr6	31656514	C	T	0.00325		.	FALSE
chr3	121351287	A	G	0.00656	HCLS1	-	FALSE
chr3	57612180	T	C	0.00018	DENND6A,PDE12	+,-	FALSE	AluSp	SINE,Alu
chr1	19201928	C	T	0.00149	ALDH4A1	-	FALSE
chr2	176042866	A	T	0.00596	ATP5G3	-	FALSE
chr17	73940094	T	C	0.00557	ACOX1	-	TRUE	AluJb	SINE,Alu
chr1	8412989	A	G	0.00225	RERE	-	FALSE
chr3	195451488	C	T	1.73907E-06	MUC20	+	FALSE
chr3	15113681	T	C	0.00048	RBSN	-	TRUE	AluSz6	SINE,Alu
chr19	42375602	A	G	0.00011		.	FALSE	AluSx	SINE,Alu
chr2	1168781	C	A	0.00650	SNTG2	+	FALSE
chr3	18427924	G	T	0.00312	SATB1	-	FALSE
chr1	144595886	G	A	0.00205	NBPF20	+	FALSE	AluJb	SINE,Alu
chr8	146280802	C	T	0.00492	C8orf33	+	FALSE	LTR13	SINE,Alu
chr1	19542458	T	C	0.00988	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	179843725	T	C	0.00028	TOR1AIP2	-	TRUE	AluJb	SINE,Alu
chr2	127826533	A	G	0.00104	BIN1	-	FALSE
chr1	160967833	T	C	6.62581E-12	F11R	-	TRUE	AluSp	SINE,Alu
chr9	80333361	C	T	0.00382	GNAQ	-	FALSE
chr1	25655853	A	G	0.00147	RSRP1,RHD	+,-	FALSE	AluSz	SINE,Alu
chr4	113198883	G	T	0.00905	TIFA	-	FALSE
chr4	17803009	T	C	0.00062	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	109818159	G	T	0.00036	CELSR2	+	FALSE
chr2	86252198	T	C	0.00076	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr8	128944712	A	C	0.00033	PVT1	+	FALSE
chr1	201845880	T	A	0.00491	IPO9	+	FALSE
chr1	28826085	A	G	0.00153	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	33149376	A	G	0.00357	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	160231113	C	T	0.00204	DCAF8	-	FALSE
chr19	39433140	G	T	0.00260	FBXO17	-	FALSE	AluJb	SINE,Alu
chr1	10517567	T	C	9.16527E-06		.	FALSE	AluSx1	SINE,Alu
chr1	33148795	A	G	0.00513	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr9	133579674	A	G	0.00018	EXOSC2	+	TRUE	AluSx3	SINE,Alu
chr1	117648269	G	A	0.00988		.	FALSE	AluSz6	SINE,Alu
chr12	64842974	C	A	0.00925		.	FALSE	AluSz	SINE,Alu
chr2	152334421	A	G	0.00464		.	FALSE	AluSq	SINE,Alu
chr1	223967953	C	T	0.00341	TP53BP2	-	FALSE
chr5	149823799	A	T	0.00672	RPS14	-	FALSE
chr1	173864944	G	T	0.00415		.	FALSE
chr1	1595048	T	C	0.00399	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	2303108	T	C	5.78895E-05	MORN1	-	FALSE	AluSp	SINE,Alu
chr1	182809019	G	A	0.00274	DHX9	+	FALSE
chr5	70503941	C	A	0.00130		.	FALSE
chr2	201774393	T	C	0.00971		.	FALSE	AluSz	SINE,Alu
chr1	155230131	C	T	0.00829	SCAMP3	-	FALSE
chr2	86248309	T	C	0.00808	LOC90784	-	FALSE
chr3	44791293	A	T	0.00031	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr8	145159705	G	A	0.00383	MAF1	+	FALSE
chr17	73885248	T	C	0.00017	TRIM65	-	TRUE	AluSg	SINE,Alu
chr1	33149399	A	G	0.00148	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	31732602	C	A	0.00336	SNRNP40	-	FALSE
chr15	85184816	T	C	3.05793E-06	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr1	231398555	A	G	0.00401	GNPAT	+	FALSE
chr1	230415244	T	C	0.00780	GALNT2	+	FALSE

RBP	FUS
Knock-Method	shRNA
RBP Family	zf-RanBP
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR927JXU
Platform	HiSeq
Pubmed ID	32252787

FUS - Target Gene Network