| RBP | PUM2 |
| Knock-Method | shRNA |
| RBP Family | PUF |
| Biosample Name | HepG2 |
| Tissue Type | Liver |
| Biosample Type | Cell line |
| # of Control | 2 |
| # of Treat | 2 |
| Species | Human |
| Data Source | ENCODE |
| Profile ID | ENCSR210DML |
| Platform | HiSeq |
| Pubmed ID | 32252787 |
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| Chrom | Site | Ref_allele | Alt_allele | Pvalue | Genename | Strand | KnownRNAediting | RepeatName | RepeatFamily |
|---|---|---|---|---|---|---|---|---|---|
| chr17 | 8378932 | A | G | 0.00372 | MYH10 | - | FALSE | ||
| chr20 | 25428384 | A | G | 0.00195 | GINS1 | + | TRUE | AluSz | SINE,Alu |
| chr1 | 179077613 | T | C | 0.00731 | ABL2 | - | FALSE | ||
| chr1 | 10520378 | T | C | 0.00743 | . | FALSE | AluSx1 | SINE,Alu | |
| chr3 | 9833986 | C | T | 2.34147E-05 | TADA3 | - | FALSE | ||
| chr8 | 146200325 | T | C | 0.00599 | ZNF252P | - | TRUE | AluSc | SINE,Alu |
| chr2 | 37334139 | T | C | 0.00146 | EIF2AK2 | - | TRUE | AluSz | SINE,Alu |
| chr3 | 63996227 | G | T | 0.00114 | PSMD6-AS2,PSMD6 | +,- | FALSE | ||
| chr2 | 201774279 | T | C | 9.55391E-05 | . | FALSE | AluSz | SINE,Alu | |
| chr1 | 62627128 | A | G | 0.00087 | PATJ | + | TRUE | AluSx | SINE,Alu |
| chr7 | 38764395 | T | C | 0.00139 | VPS41 | - | TRUE | AluSp | SINE,Alu |
| chr1 | 110136329 | G | T | 0.00993 | GNAI3 | + | FALSE | ||
| chr1 | 26143697 | G | C | 0.00778 | SEPN1 | + | FALSE | ||
| chr1 | 3416449 | C | A | 0.00748 | MEGF6 | - | FALSE | ||
| chr1 | 117644949 | C | G | 0.00862 | TTF2 | + | FALSE | ||
| chr1 | 67451522 | A | T | 0.00949 | MIER1 | + | FALSE | ||
| chr2 | 102508659 | A | T | 0.00261 | MAP4K4 | + | FALSE | ||
| chrX | 54587254 | A | G | 0.00019 | GNL3L | + | TRUE | AluSq2 | SINE,Alu |
| chr3 | 22424405 | T | A | 0.00766 | . | FALSE | |||
| chr17 | 78091513 | G | A | 0.00810 | GAA | + | FALSE | ||
| chr4 | 88059663 | G | T | 0.00165 | AFF1 | + | FALSE | (GT)n | SINE,Alu |
| chr1 | 160967833 | T | C | 0.00717 | F11R | - | TRUE | AluSp | SINE,Alu |
| chr1 | 109192040 | T | C | 6.39517E-05 | HENMT1 | - | TRUE | AluJr | SINE,Alu |
| chr1 | 19543247 | T | C | 5.35430E-06 | LOC101927895,EMC1 | +,- | FALSE | AluJb | SINE,Alu |
| chr2 | 37330431 | T | C | 0.00231 | . | FALSE | AluSq2 | SINE,Alu | |
| chr3 | 120113403 | T | G | 0.00364 | FSTL1 | - | FALSE | ||
| chr3 | 10302056 | A | G | 0.00018 | TATDN2 | + | FALSE | ||
| chr1 | 109818161 | C | T | 0.00864 | CELSR2 | + | FALSE | ||
| chr1 | 61922059 | C | A | 0.00132 | NFIA | + | FALSE | (A)n | SINE,Alu |
| chr1 | 145283986 | C | T | 0.00814 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr1 | 27108245 | T | C | 0.00265 | ARID1A | + | FALSE | ||
| chr1 | 145369476 | A | G | 0.00332 | NBPF20,NBPF10 | + | FALSE | L1MC4 | SINE,Alu |
| chr1 | 180943529 | C | T | 0.00297 | STX6 | - | FALSE | ||
| chr1 | 24798089 | G | A | 0.00815 | NIPAL3 | + | FALSE | ||
| chr1 | 38326774 | T | C | 0.00664 | INPP5B | - | TRUE | AluJr | SINE,Alu |
| chr1 | 38174665 | G | A | 0.00339 | CDCA8 | + | FALSE | ||
| chr3 | 78646942 | T | G | 0.00093 | ROBO1 | - | FALSE | ||
| chr3 | 33186111 | T | C | 0.00349 | CRTAP | + | FALSE | LTR16A1 | SINE,Alu |
| chr6 | 114182982 | C | A | 0.00308 | MARCKS | + | FALSE | ||
| chr1 | 44402565 | G | A | 0.00010 | ARTN | + | FALSE | ||
| chr4 | 17803681 | T | C | 3.85233E-06 | DCAF16 | - | TRUE | AluY | SINE,Alu |
| chr1 | 3546128 | A | G | 0.00213 | TPRG1L | + | FALSE | AluSz | SINE,Alu |
| chr4 | 761850 | T | C | 0.00026 | PCGF3 | + | FALSE | ||
| chr1 | 161928771 | G | A | 0.00294 | ATF6 | + | FALSE | ||
| chr1 | 1417974 | C | T | 0.00677 | ATAD3B | + | FALSE | ||
| chr1 | 117618067 | C | T | 0.00118 | TTF2 | + | FALSE | ||
| chr3 | 12940374 | T | G | 0.00505 | IQSEC1 | - | FALSE | ||
| chr1 | 159946779 | G | A | 0.00019 | LINC01133 | + | FALSE | (GAAA)n | SINE,Alu |
| chr3 | 152555188 | G | T | 0.00016 | P2RY1 | + | FALSE | ||
| chr1 | 144868170 | C | T | 0.00750 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr1 | 1647871 | T | C | 7.46571E-06 | CDK11B,CDK11A | - | FALSE | ||
| chr1 | 161753841 | G | A | 0.00039 | ATF6 | + | FALSE | ||
| chr1 | 9160900 | T | C | 0.00893 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 179989742 | G | C | 9.63603E-05 | CEP350 | + | FALSE | ||
| chr22 | 22050366 | T | C | 0.00449 | PPIL2 | + | FALSE | MER5A | SINE,Alu |
| chr1 | 143189042 | C | T | 0.00087 | LOC102723769 | - | FALSE | L1MC4 | SINE,Alu |
| chr6 | 111588769 | A | G | 2.24603E-05 | MFSD4B | + | TRUE | AluYm1 | SINE,Alu |
| chr1 | 9161179 | T | C | 0.00570 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 94351064 | A | T | 0.00620 | GCLM | - | FALSE | ||
| chr1 | 23636452 | A | G | 0.00294 | HNRNPR | - | FALSE | ||
| chr7 | 20177613 | T | C | 0.00913 | MACC1,LOC101927668 | - | TRUE | AluSx | SINE,Alu |
| chr4 | 17802955 | T | C | 0.00071 | DCAF16 | - | FALSE | AluSz | SINE,Alu |
| chr9 | 136335345 | G | A | 0.00490 | CACFD1 | + | FALSE | (TG)n | SINE,Alu |
| chr8 | 144684474 | T | C | 0.00058 | . | FALSE | |||
| chr1 | 46077268 | A | G | 0.00311 | NASP | + | TRUE | AluSc8 | SINE,Alu |
| chr1 | 210025751 | G | A | 4.42687E-05 | DIEXF | + | FALSE | Tigger4a | SINE,Alu |
| chr10 | 75008955 | T | C | 0.00058 | DNAJC9-AS1,MRPS16 | +,- | FALSE | AluJr | SINE,Alu |
| chr2 | 223765491 | C | T | 0.00689 | ACSL3 | + | FALSE | ||
| chr2 | 128620436 | C | T | 0.00342 | AMMECR1L | - | FALSE | ||
| chr1 | 27202959 | T | C | 0.00094 | . | FALSE | AluSq2 | SINE,Alu | |
| chr5 | 125961455 | A | G | 0.00029 | PHAX | + | TRUE | AluSz6 | SINE,Alu |
| chr1 | 201846630 | C | A | 7.51318E-05 | IPO9 | + | FALSE | (CA)n | SINE,Alu |
| chr1 | 36068210 | T | C | 0.00025 | PSMB2 | - | TRUE | AluSc | SINE,Alu |
| chr16 | 89627988 | G | T | 5.83717E-06 | RPL13 | + | FALSE | ||
| chr1 | 28826118 | A | G | 0.00023 | PHACTR4 | + | TRUE | AluJb | SINE,Alu |
| chr5 | 55235967 | A | G | 0.00639 | IL6ST | - | FALSE | (AT)n | SINE,Alu |
| chr2 | 37330172 | T | G | 0.00972 | . | FALSE | |||
| chr1 | 227845283 | C | A | 0.00809 | ZNF678 | + | FALSE | ||
| chr4 | 159176109 | C | A | 0.00042 | TMEM144 | + | FALSE | MIR | SINE,Alu |
| chr1 | 109475569 | A | G | 0.00046 | GPSM2,CLCC1 | +,- | FALSE | AluJo | SINE,Alu |
| chr1 | 6582425 | T | C | 0.00039 | NOL9 | - | TRUE | AluSx1 | SINE,Alu |
| chr1 | 53288894 | A | G | 0.00066 | ZYG11B | + | TRUE | AluJo | SINE,Alu |
| chr1 | 6583036 | T | C | 0.00296 | NOL9 | - | TRUE | AluSx4 | SINE,Alu |
| chr2 | 37330507 | T | C | 9.86666E-05 | . | FALSE | AluSq2 | SINE,Alu | |
| chr12 | 106460001 | G | A | 2.23324E-05 | NUAK1 | - | FALSE | ||
| chr9 | 19376249 | G | T | 5.55883E-05 | . | FALSE | |||
| chr1 | 11347164 | A | C | 0.00667 | UBIAD1 | + | FALSE | ||
| chr2 | 25962253 | A | T | 0.00784 | ASXL2 | - | FALSE | ||
| chr1 | 53291420 | A | G | 6.80791E-05 | ZYG11B | + | TRUE | AluJr | SINE,Alu |
| chr1 | 145509570 | A | G | 0.00028 | NBPF20,NBPF10,RBM8A | + | TRUE | AluJr | SINE,Alu |
| chr1 | 6283264 | T | C | 0.00521 | ICMT | - | TRUE | AluSx3 | SINE,Alu |
| chr7 | 44841791 | C | T | 0.00182 | PPIA | + | FALSE | ||
| chr1 | 184762524 | T | C | 0.00778 | FAM129A | - | TRUE | AluSz | SINE,Alu |
| chr3 | 10192784 | A | G | 1.73909E-05 | VHL | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 112170157 | C | G | 0.00335 | RAP1A | + | FALSE | L1ME4a | SINE,Alu |
| chr13 | 46530764 | T | G | 0.00385 | . | FALSE | |||
| chr4 | 39551167 | T | C | 0.00361 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSz | SINE,Alu |
| chr4 | 153701130 | C | T | 2.11271E-05 | ARFIP1 | + | FALSE | ||
| chr1 | 28835937 | A | G | 0.00121 | SNHG3,RCC1 | + | TRUE | AluSx4 | SINE,Alu |
| chr6 | 42856924 | A | G | 2.08684E-05 | RPL7L1 | + | TRUE | AluSp | SINE,Alu |
| chr10 | 61548859 | A | C | 0.00011 | CCDC6 | - | FALSE | ||
| chr22 | 39127060 | A | G | 0.00647 | GTPBP1 | + | FALSE | ||
| chr1 | 900725 | T | G | 0.00110 | KLHL17 | + | FALSE | (TTTA)n | SINE,Alu |
| chr1 | 10520378 | T | C | 0.00047 | . | FALSE | AluSx1 | SINE,Alu | |
| chr4 | 152020782 | C | T | 0.00989 | RPS3A | + | FALSE | ||
| chr1 | 16861804 | G | A | 0.00903 | LOC100132147 | - | FALSE | tRNA-Glu-GAA | SINE,Alu |
| chr5 | 93018884 | A | C | 0.00538 | FAM172A | - | FALSE | (TCA)n | SINE,Alu |
| chr1 | 21780000 | G | T | 0.00153 | NBPF3 | + | FALSE | ERVL-E-int | SINE,Alu |
| chr3 | 40578935 | A | G | 0.00063 | ZNF621 | + | TRUE | AluJr | SINE,Alu |
| chr8 | 144940222 | A | C | 0.00202 | EPPK1 | - | FALSE | ||
| chr1 | 16889575 | T | C | 0.00467 | NBPF1 | - | TRUE | ||
| chr1 | 23519110 | G | A | 0.00268 | HTR1D | - | FALSE | AluSc | SINE,Alu |
| chr6 | 79649800 | C | G | 0.00864 | PHIP | - | FALSE | ||
| chr2 | 176792488 | G | T | 0.00195 | LNPK | - | FALSE | ||
| chr9 | 128001436 | C | T | 0.00052 | HSPA5 | - | FALSE | ||
| chr5 | 149363273 | A | G | 0.00587 | SLC26A2 | + | TRUE | AluJr | SINE,Alu |
| chr20 | 42933642 | T | C | 0.00275 | FITM2 | - | TRUE | AluJo | SINE,Alu |
| chr1 | 1684347 | C | T | 0.00550 | NADK | - | FALSE | ||
| chr1 | 25169634 | A | G | 0.00531 | CLIC4 | + | FALSE | ||
| chr2 | 127826533 | A | G | 0.00942 | BIN1 | - | FALSE | ||
| chr6 | 42857067 | A | G | 0.00310 | RPL7L1 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 16133978 | T | C | 0.00625 | UQCRHL | - | FALSE | ||
| chrX | 3526616 | G | A | 0.00971 | PRKX | - | FALSE | ||
| chr4 | 7762675 | C | T | 3.92312E-07 | AFAP1,AFAP1-AS1 | +,- | FALSE | ||
| chr7 | 131188652 | G | C | 0.00684 | PODXL | - | FALSE | MIR3 | SINE,Alu |
| chr3 | 73115390 | C | T | 0.00462 | PPP4R2 | + | FALSE | (AT)n | SINE,Alu |
| chr1 | 86046472 | G | T | 0.00409 | CYR61 | + | FALSE | ||
| chr1 | 35886030 | T | C | 0.00606 | ZMYM4 | + | FALSE | ||
| chr1 | 94351064 | A | T | 0.00212 | GCLM | - | FALSE | ||
| chr1 | 10518921 | C | T | 0.00398 | . | FALSE | AluSx3 | SINE,Alu | |
| chr1 | 205684067 | T | C | 0.00499 | NUCKS1 | - | FALSE | ||
| chr1 | 101444071 | G | A | 0.00963 | SLC30A7 | + | FALSE | MIR3 | SINE,Alu |
| chr14 | 74388908 | T | C | 0.00835 | ZNF410 | + | FALSE | ||
| chr13 | 114204255 | A | G | 0.00134 | TMCO3 | + | FALSE | ||
| chr1 | 40219065 | C | T | 0.00232 | PPIE | + | FALSE | ||
| chr1 | 24798499 | T | C | 0.00028 | NIPAL3 | + | FALSE | (T)n | SINE,Alu |
| chr12 | 49745500 | A | G | 0.00265 | DNAJC22 | + | TRUE | AluSx3 | SINE,Alu |
| chr3 | 10193683 | T | G | 0.00681 | VHL | + | FALSE | AluJr | SINE,Alu |
| chr1 | 203821865 | C | T | 0.00222 | ZC3H11A | + | FALSE | ||
| chr2 | 64863970 | C | T | 9.52027E-09 | SERTAD2 | - | FALSE | ||
| chr3 | 88191444 | A | C | 0.00020 | CGGBP1,ZNF654 | +,- | FALSE | ||
| chr3 | 10142949 | C | T | 0.00721 | FANCD2,FANCD2OS | +,- | FALSE | ||
| chr2 | 170488325 | A | G | 0.00698 | PPIG | + | FALSE | ||
| chr1 | 31905889 | A | G | 0.00483 | SERINC2 | + | FALSE | ||
| chr1 | 156878044 | G | A | 9.48586E-05 | PEAR1 | + | FALSE | ||
| chr1 | 179044181 | A | G | 0.00083 | FAM20B | + | TRUE | AluSx | SINE,Alu |
| chr2 | 86249961 | T | C | 0.00173 | LOC90784 | - | TRUE | AluJr | SINE,Alu |
| chr1 | 67874859 | T | C | 0.00071 | SERBP1 | - | TRUE | AluSx | SINE,Alu |
| chr17 | 57279258 | A | G | 0.00095 | PRR11 | + | TRUE | AluSq2 | SINE,Alu |
| chr18 | 2804129 | G | A | 0.00157 | SMCHD1 | + | FALSE | ||
| chr1 | 145513051 | A | G | 0.00269 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | AluSz6 | SINE,Alu |
| chr11 | 8707394 | T | A | 4.23595E-06 | RPL27A | + | FALSE | ||
| chr1 | 150281017 | A | G | 0.00057 | MRPS21 | + | TRUE | AluSz | SINE,Alu |
| chr3 | 122283289 | C | A | 0.00072 | DTX3L,PARP9 | +,- | FALSE | ||
| chr1 | 155695998 | A | G | 0.00574 | DAP3 | + | TRUE | AluSp | SINE,Alu |
| chr9 | 96439041 | A | T | 0.00751 | PHF2 | + | FALSE | ||
| chr3 | 57549504 | A | G | 0.00384 | PDE12 | + | TRUE | AluJb | SINE,Alu |
| chr17 | 5288079 | A | C | 0.00085 | RABEP1 | + | FALSE | ||
| chr2 | 131906031 | C | T | 0.00439 | PLEKHB2 | + | FALSE | ||
| chr5 | 79923430 | T | C | 0.00817 | DHFR | - | TRUE | AluJr | SINE,Alu |
| chr9 | 132266624 | A | G | 5.52448E-06 | LINC00963 | + | TRUE | AluSx | SINE,Alu |
| chr1 | 114443606 | A | G | 0.00014 | AP4B1-AS1,AP4B1 | +,- | FALSE | AluSp | SINE,Alu |
| chr1 | 108742632 | C | T | 0.00933 | SLC25A24 | - | FALSE | ||
| chr20 | 25428547 | A | G | 7.92315E-05 | GINS1 | + | TRUE | AluJb | SINE,Alu |
| chr12 | 120898658 | A | G | 0.00372 | GATC | + | TRUE | AluY | SINE,Alu |
| chr5 | 79923293 | T | C | 0.00039 | DHFR | - | TRUE | AluJr | SINE,Alu |
| chr1 | 28661633 | A | G | 0.00053 | MED18 | + | TRUE | AluSg | SINE,Alu |
| chr1 | 168220489 | A | G | 0.00319 | . | FALSE | AluSz6 | SINE,Alu | |
| chr1 | 6640640 | T | G | 0.00982 | ZBTB48 | + | FALSE | ||
| chr17 | 43002237 | C | A | 0.00141 | KIF18B | - | FALSE | ||
| chr1 | 46076462 | A | G | 1.23194E-07 | NASP | + | TRUE | AluSx | SINE,Alu |
| chr1 | 78445292 | A | G | 7.48186E-07 | DNAJB4 | + | FALSE | ||
| chr6 | 32789807 | C | T | 0.00281 | . | FALSE | |||
| chr5 | 139931633 | C | A | 0.00014 | SRA1 | - | FALSE | ||
| chr14 | 53242859 | T | C | 9.31997E-05 | GNPNAT1 | - | TRUE | AluJr | SINE,Alu |
| chr1 | 226172221 | T | C | 0.00030 | SDE2 | - | FALSE | L1MEf | SINE,Alu |
| chr1 | 36068052 | G | T | 1.69686E-12 | PSMB2 | - | FALSE | L1ME4b | SINE,Alu |
| chr3 | 122293773 | A | T | 0.00147 | DTX3L | + | FALSE | ||
| chr1 | 28835847 | A | G | 5.60567E-05 | SNHG3,RCC1 | + | TRUE | AluSx4 | SINE,Alu |
| chr1 | 144828764 | G | T | 0.00976 | NBPF20,NBPF9 | + | FALSE | ||
| chr1 | 32373837 | G | T | 0.00068 | PTP4A2 | - | FALSE | (T)n | SINE,Alu |
| chr7 | 21941586 | A | C | 0.00016 | CDCA7L | - | FALSE | ||
| chr4 | 165998694 | T | C | 0.00041 | TMEM192 | - | TRUE | AluSg | SINE,Alu |
| chr5 | 79923998 | T | C | 0.00753 | DHFR | - | TRUE | AluSp | SINE,Alu |
| chr10 | 8116464 | G | A | 0.00695 | GATA3 | + | FALSE | A-rich | SINE,Alu |
| chr3 | 185826740 | T | G | 0.00041 | ETV5 | - | FALSE | ||
| chr2 | 200813126 | T | C | 0.00713 | TYW5 | - | FALSE | ||
| chr1 | 201846617 | A | C | 0.00380 | IPO9 | + | FALSE | (CA)n | SINE,Alu |
| chr12 | 123253741 | A | G | 0.00134 | DENR | + | TRUE | (AT)n | SINE,Alu |
| chr1 | 229652587 | T | C | 0.00732 | ABCB10 | - | FALSE | ||
| chr15 | 65442476 | T | C | 0.00084 | CLPX | - | TRUE | AluSg4 | SINE,Alu |
| chr1 | 90478690 | A | C | 0.00035 | ZNF326 | + | FALSE | ||
| chr1 | 116947126 | C | A | 4.37114E-09 | ATP1A1,ATP1A1-AS1 | +,- | FALSE | ||
| chr1 | 90049040 | A | G | 0.00190 | LRRC8B | + | FALSE | ||
| chr1 | 28422194 | A | C | 0.00018 | . | FALSE | |||
| chr1 | 1595540 | T | C | 0.00048 | CDK11B,SLC35E2B | - | TRUE | AluJr | SINE,Alu |
| chr2 | 176792357 | A | G | 7.02808E-05 | LNPK | - | FALSE | ||
| chr1 | 713710 | G | C | 0.00448 | LOC100288069 | - | FALSE | FRAM | SINE,Alu |
| chr4 | 13570943 | T | G | 2.17672E-09 | BOD1L1 | - | FALSE | ||
| chr1 | 36522615 | A | G | 0.00658 | . | FALSE | AluSc | SINE,Alu | |
| chr6 | 43738977 | C | T | 0.00088 | VEGFA | + | FALSE | ||
| chr1 | 33066859 | A | G | 0.00403 | ZBTB8A | + | TRUE | AluSq4 | SINE,Alu |
| chr4 | 152025793 | T | A | 0.00675 | RPS3A | + | FALSE | ||
| chr1 | 146650289 | C | T | 0.00024 | PDIA3P1 | + | FALSE | ||
| chr5 | 40832555 | A | T | 5.95918E-06 | RPL37 | - | FALSE | ||
| chr6 | 52365328 | T | G | 0.00983 | TRAM2 | - | FALSE | (T)n | SINE,Alu |
| chr2 | 204294497 | C | T | 0.00203 | ABI2 | + | FALSE | ||
| chr1 | 52817504 | T | C | 0.00934 | CC2D1B | - | TRUE | AluSg4 | SINE,Alu |
| chr2 | 206987597 | T | C | 0.00085 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 16890428 | T | A | 1.76753E-05 | NBPF1 | - | FALSE | ||
| chr1 | 10517290 | T | C | 0.00437 | . | FALSE | AluJr | SINE,Alu | |
| chr2 | 37331019 | T | C | 0.00033 | . | FALSE | AluSx1 | SINE,Alu | |
| chr2 | 118854086 | G | C | 0.00066 | INSIG2 | + | FALSE | ||
| chr12 | 25357680 | T | C | 0.00861 | ETFRF1 | + | FALSE | ||
| chr1 | 15755550 | A | C | 0.00969 | EFHD2 | + | FALSE | ||
| chr1 | 118502087 | C | T | 0.00585 | WDR3,SPAG17 | +,- | FALSE | ||
| chr1 | 67875011 | G | T | 0.00359 | SERBP1 | - | FALSE | ||
| chr2 | 69548320 | C | T | 7.68354E-05 | GFPT1 | - | FALSE | ||
| chr1 | 33148691 | A | G | 0.00547 | SYNC,RBBP4 | +,- | FALSE | AluSc | SINE,Alu |
| chr16 | 58054472 | T | C | 0.00530 | USB1 | + | FALSE | ||
| chr5 | 130729522 | T | G | 0.00506 | CDC42SE2 | + | FALSE | (T)n | SINE,Alu |
| chr1 | 1252468 | T | C | 0.00096 | CPSF3L | - | TRUE | AluJr | SINE,Alu |
| chr5 | 122165482 | C | T | 0.00367 | SNX2 | + | FALSE | (AC)n | SINE,Alu |
| chr7 | 116147752 | A | G | 0.00031 | CAV2 | + | FALSE | (AAAAGAAA)n | SINE,Alu |
| chr1 | 87569223 | G | C | 0.00436 | HS2ST1 | + | FALSE | ||
| chr1 | 1656557 | T | C | 0.00012 | SLC35E2 | - | TRUE | AluSz | SINE,Alu |
| chr7 | 20177519 | T | C | 0.00885 | MACC1,LOC101927668 | - | TRUE | AluSx | SINE,Alu |
| chr1 | 1252221 | T | C | 0.00728 | CPSF3L | - | TRUE | AluSx | SINE,Alu |
| chr1 | 153963246 | G | A | 6.32081E-05 | RPS27 | + | FALSE | ||
| chr1 | 8045340 | C | A | 0.00059 | PARK7 | + | FALSE | ||
| chr11 | 769459 | T | C | 0.00082 | PDDC1 | - | TRUE | AluSq2 | SINE,Alu |
| chr1 | 1534826 | C | T | 0.00382 | FNDC10 | - | FALSE | ||
| chr8 | 30536152 | T | C | 0.00015 | GSR | - | TRUE | AluJr | SINE,Alu |
| chr1 | 142688506 | T | C | 0.00337 | . | FALSE | |||
| chr1 | 204526648 | A | G | 0.00302 | MDM4 | + | TRUE | AluSx | SINE,Alu |
| chr1 | 46076533 | A | G | 1.88265E-05 | NASP | + | TRUE | AluSx | SINE,Alu |
| chr17 | 7124772 | G | A | 0.00175 | ACADVL | + | FALSE | ||
| chr1 | 143915879 | A | C | 0.00097 | . | FALSE | |||
| chr3 | 179115501 | A | T | 1.86203E-06 | GNB4 | - | FALSE | ||
| chr2 | 85548074 | T | C | 0.00428 | TGOLN2 | - | FALSE | ||
| chr1 | 100731820 | G | A | 0.00771 | RTCA | + | FALSE | ||
| chr1 | 52383255 | T | C | 0.00708 | RAB3B | - | FALSE | AluJr | SINE,Alu |
| chr1 | 120165040 | T | C | 0.00107 | ZNF697 | - | FALSE | ||
| chr17 | 26955330 | A | C | 0.00291 | KIAA0100 | - | FALSE | ||
| chr1 | 9642828 | T | A | 0.00148 | SLC25A33 | + | FALSE | ||
| chr1 | 36921372 | A | T | 0.00259 | MRPS15 | - | FALSE | ||
| chr1 | 93602673 | C | T | 0.00252 | MTF2 | + | FALSE | ||
| chr4 | 73922981 | T | C | 0.00491 | COX18 | - | TRUE | AluSz | SINE,Alu |
| chr2 | 128602913 | G | A | 0.00230 | . | FALSE | |||
| chr2 | 132481470 | C | T | 0.00594 | C2orf27A | + | FALSE | ||
| chr2 | 204300093 | A | C | 0.00105 | RAPH1 | - | FALSE | FLAM_C | SINE,Alu |
| chr7 | 128143932 | A | G | 0.00332 | . | FALSE | AluSq2 | SINE,Alu | |
| chr1 | 115119377 | A | T | 0.00157 | BCAS2 | - | FALSE | ||
| chr1 | 23834008 | A | C | 0.00374 | E2F2 | - | FALSE | AluSz | SINE,Alu |
| chr1 | 150446028 | G | T | 0.00624 | RPRD2 | + | FALSE | ||
| chr1 | 145284883 | A | G | 0.00062 | NBPF20,NOTCH2NL | + | FALSE | L2a | SINE,Alu |
| chr1 | 24134721 | T | C | 0.00448 | HMGCL | - | FALSE | ||
| chr1 | 50883798 | T | C | 0.00156 | DMRTA2 | - | FALSE | ||
| chr6 | 42856158 | A | G | 0.00118 | RPL7L1 | + | TRUE | AluSz | SINE,Alu |
| chr8 | 9639522 | A | G | 0.00823 | TNKS | + | TRUE | MER53 | SINE,Alu |
| chr2 | 100019496 | A | G | 0.00789 | REV1 | - | FALSE | ||
| chr4 | 17628548 | A | G | 0.00991 | . | FALSE | AluSz | SINE,Alu | |
| chr1 | 10519932 | T | C | 0.00710 | . | FALSE | AluJr | SINE,Alu | |
| chr5 | 139931630 | A | T | 0.00052 | SRA1 | - | FALSE | ||
| chr1 | 955597 | G | T | 3.81431E-06 | AGRN | + | FALSE | ||
| chr1 | 33149375 | A | G | 0.00840 | SYNC,RBBP4 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr1 | 36186320 | T | C | 0.00281 | . | FALSE | AluSg | SINE,Alu | |
| chr2 | 202032107 | A | G | 0.00401 | CFLAR | + | TRUE | AluJo | SINE,Alu |
| chr17 | 65334766 | T | C | 4.45484E-05 | PSMD12 | - | TRUE | AluSq | SINE,Alu |
| chr1 | 16912099 | G | C | 0.00450 | NBPF1 | - | FALSE | ||
| chr3 | 66428450 | G | A | 0.00355 | SLC25A26 | + | FALSE | ||
| chr15 | 33064148 | T | C | 1.59288E-05 | FMN1 | - | FALSE | ||
| chr3 | 14985983 | A | T | 6.81677E-14 | FGD5-AS1 | - | FALSE | ||
| chr5 | 53841241 | T | A | 0.00179 | SNX18 | + | FALSE | ||
| chr1 | 184762627 | T | C | 0.00519 | FAM129A | - | TRUE | AluSz | SINE,Alu |
| chr2 | 32532809 | A | G | 0.00255 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 169101269 | T | G | 0.00307 | ATP1B1 | + | FALSE | (T)n | SINE,Alu |
| chr2 | 191067764 | A | T | 0.00165 | C2orf88 | + | FALSE | ||
| chr1 | 89648329 | T | C | 0.00093 | GBP4 | - | TRUE | AluYg6 | SINE,Alu |
| chr1 | 204524400 | A | G | 0.00029 | MDM4 | + | TRUE | AluY | SINE,Alu |
| chr6 | 158613393 | A | T | 0.00108 | GTF2H5 | + | FALSE | ||
| chr2 | 75882576 | T | C | 0.00328 | MRPL19 | + | FALSE | ||
| chr4 | 843695 | A | G | 0.00602 | GAK | - | FALSE | ||
| chr1 | 144852203 | T | G | 0.00518 | NBPF20,PDE4DIP | +,- | FALSE | ||
| chr6 | 29911284 | T | C | 0.00019 | . | FALSE | |||
| chr1 | 33148691 | A | G | 2.12433E-06 | SYNC,RBBP4 | +,- | FALSE | AluSc | SINE,Alu |