RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr2	99812808	A	G	5.12907E-06	MRPL30	+	TRUE	AluJb	SINE,Alu
chr2	128644574	A	G	0.00163		.	FALSE
chr1	45244433	G	A	0.00060		.	FALSE
chr1	156495521	C	A	0.00097	IQGAP3	-	FALSE
chr2	152334323	A	G	0.00504		.	FALSE	AluSq	SINE,Alu
chr1	6282301	T	C	0.00290	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	11141187	C	G	0.00814	EXOSC10	-	FALSE
chr5	52389817	T	A	0.00868	ITGA2	+	FALSE
chr1	110604747	G	A	0.00101	ALX3	-	FALSE
chr3	15114759	G	A	1.99109E-05	RBSN	-	FALSE
chr1	183218868	T	G	0.00091	NMNAT2	-	FALSE
chr7	137612915	G	A	0.00057	CREB3L2	-	FALSE
chr12	90914	C	T	0.00539	LOC100288778	+	FALSE
chr1	16932144	A	C	0.00559	NBPF1	-	FALSE
chr1	19543457	T	C	0.00362	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr2	128061053	A	G	0.00184	MAP3K2	-	FALSE
chr3	127790249	A	G	0.00276	RUVBL1,SEC61A1	+,-	FALSE
chr2	172413267	G	C	0.00938	CYBRD1	+	FALSE
chr1	203709034	A	G	0.00049	ATP2B4	+	FALSE
chr1	27108139	A	T	0.00683	ARID1A	+	FALSE
chr5	6668842	C	T	4.46208E-05	SRD5A1	+	FALSE
chr2	38971637	G	A	2.13337E-05	SRSF7	-	FALSE
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr1	19232017	T	G	0.00723	IFFO2	-	FALSE
chr5	31553968	T	C	0.00555	C5orf22	+	FALSE
chr1	117645998	A	G	0.00057		.	FALSE
chr1	54382632	T	C	0.00219		.	FALSE	AluSq2	SINE,Alu
chr14	88933002	C	G	0.00459	PTPN21	-	FALSE
chr7	131241052	A	G	0.00663	PODXL	-	FALSE	(GGCGAC)n	SINE,Alu
chr7	65619243	A	G	9.04168E-05	CRCP	+	TRUE	AluSz6	SINE,Alu
chr2	216903621	T	C	0.00611	PECR	-	TRUE	AluSx3	SINE,Alu
chr5	125961810	A	G	3.92353E-06	PHAX	+	TRUE	FLAM_C	SINE,Alu
chr1	45975266	A	G	0.00345	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	10519910	T	C	0.00735		.	FALSE	AluJr	SINE,Alu
chr2	36777209	T	C	0.00299	CRIM1	+	FALSE	(TG)n	SINE,Alu
chr19	9673275	T	C	0.00081		.	FALSE	Tigger1	SINE,Alu
chr1	79109337	G	T	0.00790	IFI44L	+	FALSE	LTR26	SINE,Alu
chr1	160966351	T	C	0.00023	F11R	-	TRUE	AluSg	SINE,Alu
chr1	246931057	A	G	0.00048	SCCPDH	+	FALSE
chr1	15993514	C	T	0.00802		.	FALSE	AluSx4	SINE,Alu
chr16	18794286	C	T	0.00633	RPS15A	-	FALSE
chr15	45366812	A	G	0.00446	SORD	+	FALSE
chr1	36068369	T	C	0.00511	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	89570148	A	G	0.00084		.	FALSE
chr3	194789663	T	C	0.00754	XXYLT1	-	FALSE	MARNA	SINE,Alu
chr1	8413839	A	G	0.00776	RERE	-	FALSE
chr1	22200473	C	T	0.00039	HSPG2	-	FALSE
chr1	28835847	A	G	0.00042	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	109475635	T	C	0.00458	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr5	139931627	C	T	0.00073	SRA1	-	FALSE
chr1	89447720	G	A	0.00030	KYAT3,RBMXL1	-	FALSE
chr3	52567617	A	G	0.00025	NT5DC2	-	FALSE	G-rich	SINE,Alu
chr2	217001882	T	C	0.00996	XRCC5	+	FALSE
chr1	36794266	A	G	0.00141		.	FALSE	AluJb	SINE,Alu
chr1	1650797	A	G	0.00325	CDK11B,CDK11A	-	FALSE
chr1	99164434	G	A	0.00911	SNX7	+	FALSE
chr17	74710572	T	C	0.00594	JMJD6	-	FALSE
chr6	151678865	T	G	0.00016	AKAP12	+	FALSE	(T)n	SINE,Alu
chr19	13883548	A	G	0.00566	MRI1	+	TRUE	AluYk3	SINE,Alu
chr15	33064742	C	G	0.00215	FMN1	-	FALSE
chr1	39794147	A	C	9.03176E-05	MACF1	+	FALSE
chr19	7084638	A	G	0.00024	ZNF557	+	TRUE	AluJb	SINE,Alu
chr3	14186757	C	G	0.00864	XPC	-	FALSE
chr1	6583036	T	C	0.00296	NOL9	-	TRUE	AluSx4	SINE,Alu
chr2	37329214	T	C	0.00081		.	FALSE	AluJr4	SINE,Alu
chr1	143189473	C	A	0.00626	LOC102723769	-	FALSE
chr5	141690772	C	T	0.00632	SPRY4	-	FALSE
chr7	20178567	T	C	1.15326E-05	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr1	160967833	T	C	6.62581E-12	F11R	-	TRUE	AluSp	SINE,Alu
chr1	46774813	C	G	0.00766	UQCRH	+	FALSE
chr1	53291425	A	G	0.00517	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr10	61548852	G	A	0.00693	CCDC6	-	FALSE
chr1	27107948	G	A	0.00177	ARID1A	+	FALSE
chr1	205683408	C	T	0.00082	NUCKS1	-	FALSE
chr1	19585772	G	A	2.66054E-05	MRTO4	+	FALSE	AluSc8	SINE,Alu
chr1	179084080	T	G	0.00926	ABL2	-	FALSE
chr1	146215138	A	G	0.00038	NBPF20,NBPF10,NBPF25P	+	FALSE
chr1	113511341	A	G	0.00283		.	FALSE	AluY	SINE,Alu
chr17	65335253	T	C	0.00344	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	9163400	T	C	0.00726		.	FALSE	AluSp	SINE,Alu
chr14	75202963	A	G	2.20276E-06	FCF1	+	TRUE	AluSx	SINE,Alu
chr19	39433140	G	T	0.00260	FBXO17	-	FALSE	AluJb	SINE,Alu
chr9	89626918	A	G	0.00048	LOC440173	-	FALSE
chr5	36143413	G	A	0.00097	LMBRD2	-	FALSE
chr1	138156	G	T	0.00177	LOC729737	-	FALSE
chr3	12598618	C	T	0.00812	MKRN2	+	FALSE
chr1	1337334	G	T	0.00549	LOC148413,MRPL20	+,-	FALSE
chr1	179829508	T	C	0.00048	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	53680090	G	A	0.00321	C1orf123	-	FALSE
chr1	153599390	T	C	0.00135	S100A13	-	FALSE
chr1	931935	T	C	0.00913		.	FALSE
chr3	15114399	T	C	0.00848	RBSN	-	TRUE	AluY	SINE,Alu
chr21	34729930	A	G	0.00060	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr5	130537666	A	G	0.00329	LYRM7	+	TRUE	AluJb	SINE,Alu
chr7	29960812	T	A	1.34773E-06	SCRN1	-	FALSE
chr12	25358943	T	C	0.00310	KRAS	-	FALSE
chr3	52800284	T	C	6.08396E-05	NEK4	-	FALSE
chr1	16890630	T	G	0.00147	NBPF1	-	FALSE
chr1	168218573	A	G	0.00202		.	FALSE	AluSz	SINE,Alu
chr3	15112495	T	C	0.00030	RBSN	-	TRUE	AluSq2	SINE,Alu
chr1	204524400	A	G	0.00029	MDM4	+	TRUE	AluY	SINE,Alu
chr5	125961447	A	G	0.00025	PHAX	+	TRUE	AluSz6	SINE,Alu
chr16	75479910	T	C	0.00026	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	203713133	G	A	0.00984	ATP2B4	+	FALSE
chr6	31595882	C	A	0.00450		.	FALSE
chr12	102517753	T	C	0.00022	PARPBP	+	FALSE
chr1	9160963	T	C	0.00354		.	FALSE	AluJb	SINE,Alu
chr1	193055149	A	G	0.00589	TROVE2	+	FALSE
chr1	10517313	T	C	0.00305		.	FALSE	AluJr	SINE,Alu
chr21	34730077	A	G	0.00019	IFNAR1	+	TRUE	AluSg7	SINE,Alu
chr1	150783968	T	A	0.00368	ARNT	-	FALSE
chr22	39127060	A	G	0.00647	GTPBP1	+	FALSE
chr1	155214017	C	A	0.00946	GBA	-	FALSE	AluSx3	SINE,Alu
chr1	120163007	G	A	0.00573	ZNF697	-	FALSE
chr15	74319808	A	G	0.00011	PML	+	TRUE	AluJr	SINE,Alu
chr1	26299050	G	A	0.00110	PAFAH2	-	FALSE
chr2	10050947	T	C	0.00273	TAF1B	+	FALSE
chr7	102006488	A	T	0.00168	LOC100289561,LOC100630923	+	FALSE
chr1	144902696	A	T	0.00997	NBPF20,PDE4DIP	+,-	FALSE
chr15	89739348	A	G	0.00035	ABHD2	+	FALSE	MER5A	SINE,Alu
chr14	75202532	A	G	1.20675E-07	FCF1	+	TRUE	AluSc	SINE,Alu
chr2	217366570	A	G	0.00332		.	FALSE	AluSz	SINE,Alu
chr1	204374665	G	A	0.00717	PPP1R15B	-	FALSE
chr1	10517513	T	C	0.00088		.	FALSE	AluSx1	SINE,Alu
chr1	145513031	A	G	0.00014	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	36067752	T	C	5.48772E-07	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	40353799	G	T	0.00906	EIF1B	+	FALSE
chr1	45280109	A	G	0.00591		.	FALSE	AluYk3	SINE,Alu
chr1	45975670	A	G	8.16323E-05	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr5	68850966	G	T	0.00134	OCLN	+	FALSE	AluSx4	SINE,Alu
chr1	22854702	C	T	5.42952E-11	ZBTB40	+	FALSE
chr1	97543764	C	T	0.00901	DPYD	-	FALSE
chr1	70833400	C	T	0.00224	HHLA3	+	FALSE	LTR7	SINE,Alu
chr1	14143003	A	G	0.00028	PRDM2	+	FALSE
chr1	16933753	G	A	0.00740	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	204096630	T	C	0.00471	SOX13	+	FALSE
chr7	44841236	G	A	0.00819	PPIA	+	FALSE
chr16	80636297	C	G	0.00161	CDYL2	-	FALSE
chr7	29961659	C	G	7.23387E-07	SCRN1	-	FALSE
chr1	28865502	G	A	0.00531	RCC1	+	FALSE
chr21	9908316	C	T	0.00719	TEKT4P2	-	FALSE
chr8	30536016	T	C	2.97001E-06	GSR	-	TRUE	AluJr	SINE,Alu
chr17	57279323	A	G	0.00159	PRR11	+	TRUE	AluSq2	SINE,Alu
chr4	2940026	T	C	3.38773E-05	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	45244413	T	A	0.00750		.	FALSE
chr3	39138082	C	T	8.26379E-05	WDR48	+	FALSE
chr1	9331254	A	G	0.00793	H6PD	+	TRUE	AluSx	SINE,Alu
chr1	36067752	T	C	0.00402	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	16958047	C	T	2.98219E-05		.	FALSE
chr2	96850885	T	C	0.00699	STARD7	-	FALSE
chr7	117825681	A	G	1.90524E-05	LSM8	+	FALSE
chr6	13788387	T	C	0.00240	MCUR1	-	TRUE	AluSx	SINE,Alu
chr10	51613297	A	G	0.00347	TIMM23B,TIMM23	+,-	FALSE
chr1	6282401	T	C	0.00806	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	87213175	A	T	0.00082	SH3GLB1	+	FALSE
chr1	91486839	T	C	0.00329	ZNF644	-	FALSE
chr1	109746745	A	G	0.00073	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr1	144606963	G	T	0.00080	NBPF20	+	FALSE
chr3	44790781	T	C	0.00074	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	148556753	G	A	0.00272		.	FALSE
chr1	10520145	T	C	0.00590		.	FALSE	AluSx	SINE,Alu
chr19	33470874	A	G	0.00119	RHPN2	-	FALSE
chr1	45975670	A	G	0.00530	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	19542310	T	C	0.00873	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	28826190	A	G	0.00233	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr18	10752666	C	T	1.68498E-05	PIEZO2	-	FALSE
chr3	170113718	T	C	0.00316	SKIL	+	FALSE
chr2	74645427	A	G	0.00011	C2orf81	-	FALSE
chr1	234561498	T	C	2.33971E-05	TARBP1	-	FALSE
chr2	201774775	T	C	0.00872		.	FALSE	AluJr4	SINE,Alu
chr1	28825331	A	G	0.00563	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr20	25428750	A	G	3.17139E-06	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	24022912	G	A	4.29449E-05	RPL11	+	FALSE
chr4	25279508	G	A	3.42130E-11	PI4K2B	+	FALSE
chr4	129796173	G	T	1.40481E-05	JADE1	+	FALSE
chr3	179115697	T	C	3.71610E-05	GNB4	-	TRUE	AluSg7	SINE,Alu
chr8	27632073	T	G	0.00013	ESCO2	+	FALSE
chr16	10624967	T	C	0.00013	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	10043527	A	G	0.00811	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr1	111991845	C	A	0.00803	WDR77,ATP5F1	+,-	FALSE
chr1	45244053	A	G	0.00202	RPS8	+	FALSE
chr6	31324078	G	T	0.00480		.	FALSE
chr15	41597559	A	G	0.00127		.	FALSE	AluSz6	SINE,Alu
chr10	98281480	T	A	0.00620	TM9SF3	-	FALSE
chr3	197612370	A	G	0.00157		.	FALSE	AluSp	SINE,Alu
chr1	33149508	A	G	0.00107	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	16891365	G	A	0.00475	NBPF1	-	FALSE
chr1	19543247	T	C	5.23836E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	159946783	A	G	0.00097	LINC01133	+	FALSE	(GAAA)n	SINE,Alu
chr2	37330435	T	C	3.14905E-06		.	FALSE	AluSq2	SINE,Alu
chr1	32385071	T	A	0.00436	PTP4A2	-	FALSE
chr1	62628606	A	G	0.00164	PATJ	+	TRUE	AluSg4	SINE,Alu
chr3	66430378	T	A	0.00326	LRIG1	-	FALSE
chr4	170643772	C	T	0.00926	CLCN3	+	FALSE
chr1	117945042	G	A	0.00150	MAN1A2	+	FALSE
chr1	203098275	T	G	0.00942	ADORA1	+	FALSE
chr10	129910475	T	G	0.00061	MKI67	-	FALSE
chr3	196197477	A	C	0.00174	RNF168	-	FALSE
chr1	9644562	A	G	0.00337		.	FALSE	AluSx	SINE,Alu
chr3	99515750	A	G	2.61553E-11	MIR548G	-	FALSE
chr6	42856064	A	G	0.00019	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr2	105881486	A	G	0.00042	TGFBRAP1	-	FALSE
chr16	719933	T	C	0.00067	RHOT2	+	FALSE
chr19	39440966	T	C	0.00011	FBXO17	-	FALSE
chr15	35272171	T	C	0.00183	ZNF770	-	FALSE
chr2	99812414	A	G	9.82924E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr19	16663345	T	C	0.00304	SLC35E1	-	TRUE	AluSg	SINE,Alu
chr1	145688983	A	G	0.00101	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr6	13788222	T	C	0.00490	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	151092875	A	G	0.00154	GABPB2	+	TRUE	AluSp	SINE,Alu
chr5	149364144	A	G	0.00014	SLC26A2	+	TRUE	AluSc8	SINE,Alu
chr2	224621887	T	C	0.00373	AP1S3	-	FALSE	AluSc	SINE,Alu
chr15	41597484	A	G	0.00619		.	FALSE	AluSz6	SINE,Alu
chr1	53288862	A	G	0.00799	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	10586904	C	T	0.00041	ODC1,SNORA80B	-	FALSE
chr1	6697343	C	T	0.00054	DNAJC11	-	FALSE
chr3	48787684	T	C	0.00813	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr19	58374130	C	T	0.00124	ZNF587	+	FALSE
chr8	27592828	G	A	0.00133	CCDC25	-	FALSE
chr16	48388258	A	G	8.02686E-05	MIR5095	+	TRUE	AluSz	SINE,Alu
chr1	16952298	A	C	2.15086E-05	CROCCP2	-	FALSE
chr1	205686522	G	T	0.00427	NUCKS1	-	FALSE
chr4	38937372	T	C	0.00388	FAM114A1	+	FALSE
chr3	73117835	C	T	2.08399E-05	PPP4R2	+	FALSE
chr15	41591418	A	G	6.38388E-06	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr3	191100561	C	A	2.52744E-07	CCDC50	+	FALSE
chr1	168218671	A	G	0.00974		.	FALSE	AluSz	SINE,Alu
chr9	132268359	A	G	0.00436	LINC00963	+	TRUE	AluJb	SINE,Alu
chr1	36068196	T	C	0.00376	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	153907297	C	T	3.91411E-05	DENND4B	-	FALSE	(CTG)n	SINE,Alu
chr1	19953131	G	A	0.00486	MINOS1,MINOS1-NBL1	+	FALSE
chr7	43665371	A	T	0.00430	STK17A,COA1	+,-	FALSE	(AG)n	SINE,Alu
chr14	52906081	T	G	0.00602	TXNDC16	-	FALSE
chr1	179813613	T	C	7.15786E-05	TOR1AIP2	-	FALSE
chr3	69151152	C	A	0.00750	ARL6IP5	+	FALSE
chr1	10521103	T	C	0.00788	DFFA	-	TRUE	AluY	SINE,Alu
chr1	44447006	T	C	0.00767	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr1	19543459	T	C	0.00395	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	10290511	G	T	0.00289	TATDN2	+	FALSE
chr1	28087457	G	T	0.00178	FAM76A	+	FALSE	(T)n	SINE,Alu
chr12	98942665	A	G	1.31028E-05	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	569782	T	C	0.00010		.	FALSE
chr15	42503336	C	T	0.00916	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr19	19793729	A	G	0.00124	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr2	203745105	T	C	0.00644		.	FALSE	AluSx	SINE,Alu
chr1	144931392	G	A	0.00241	NBPF20,PDE4DIP	+,-	FALSE
chr3	196660344	T	A	0.00366	SENP5	+	FALSE
chr1	184762676	T	C	0.00720	FAM129A	-	TRUE	AluSz	SINE,Alu
chr2	191224981	G	T	0.00245	INPP1	+	FALSE
chrX	77083673	T	C	0.00090	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	65330637	C	T	0.00251	JAK1	-	FALSE
chr1	24022437	A	G	0.00342	RPL11	+	FALSE
chr2	44459528	G	A	0.00100	PPM1B	+	FALSE
chr3	120046117	G	T	0.00443	LRRC58	-	FALSE	AluYi6	SINE,Alu
chr14	19684445	A	G	0.00351	DUXAP10	+	FALSE
chr11	8707908	A	G	0.00262	RPL27A	+	TRUE	AluSx1	SINE,Alu
chr1	36322433	G	A	0.00663	AGO4	+	FALSE
chr1	31351513	G	A	0.00265	SDC3	-	FALSE
chr1	6582149	T	C	0.00173	NOL9	-	TRUE	AluSq4	SINE,Alu
chr14	105270478	G	T	0.00252	ZBTB42	+	FALSE
chr6	43582795	A	G	0.00087	POLH	+	TRUE	AluSx1	SINE,Alu
chr1	26143726	G	T	0.00560	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	28921019	A	G	0.00030	RAB42	+	TRUE	AluSx	SINE,Alu
chr3	45722287	A	G	0.00197	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	6585331	T	C	0.00779	NOL9	-	TRUE	FAM	SINE,Alu
chr1	45976265	A	G	0.00657	MMACHC	+	FALSE
chr1	47843356	A	T	0.00556	CMPK1	+	FALSE
chr4	154257510	A	C	0.00121	TRIM2	+	FALSE	(A)n	SINE,Alu
chr4	177252326	A	G	0.00554	SPCS3	+	TRUE
chr1	36770605	C	T	0.00041	THRAP3	+	FALSE	(T)n	SINE,Alu
chr6	138412313	A	G	0.00092	PERP	-	FALSE
chr2	85548854	T	C	0.00097	TGOLN2	-	FALSE
chr20	62598815	C	T	0.00711	ZNF512B	-	FALSE
chr1	6684050	G	A	2.21294E-05	PHF13	+	FALSE
chr1	100489996	A	G	0.00069	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr1	709591	G	A	0.00226	LOC100288069	-	FALSE
chr1	33071096	A	G	0.00692	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr2	10933249	C	T	0.00889	PDIA6	-	FALSE
chr9	136209402	A	G	0.00431	MED22	-	FALSE	(CAGGG)n	SINE,Alu
chr3	45721934	A	G	0.00639	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr3	14526648	T	G	9.03719E-05	SLC6A6	+	FALSE
chr8	146280802	C	T	1.51873E-05	C8orf33	+	FALSE	LTR13	SINE,Alu
chr8	11666384	C	T	0.00029	FDFT1	+	FALSE
chr14	50361197	G	T	1.76251E-06	ARF6	+	FALSE
chr4	39551975	T	C	5.31269E-07	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	78414329	G	A	0.00874	FUBP1	-	FALSE	A-rich	SINE,Alu
chr3	172115476	A	G	0.00892	FNDC3B	+	FALSE	(A)n	SINE,Alu
chr1	171501831	A	G	0.00040	PRRC2C	+	FALSE
chr3	40578831	A	G	0.00956	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	145511929	A	G	0.00023	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	144822294	G	C	0.00371	NBPF20,NBPF9	+	FALSE
chr11	67765170	G	T	0.00185	UNC93B1	-	FALSE
chr1	53289759	A	G	0.00582	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	27992823	A	C	0.00087	IFI6	-	FALSE	FAM	SINE,Alu
chr1	16913612	G	A	0.00145	NBPF1	-	FALSE
chr1	51873951	G	A	1.40484E-05	EPS15	-	FALSE
chr5	74063154	C	G	0.00255	GFM2,NSA2	+,-	FALSE
chr15	90820082	A	G	0.00297		.	FALSE	AluY	SINE,Alu
chr22	50745987	C	G	0.00683	PLXNB2	-	FALSE
chr1	149816373	G	A	0.00364		.	FALSE	(A)n	SINE,Alu
chrM	9988	T	C	0.00011		.	FALSE
chr1	144930596	C	A	0.00103	NBPF20,PDE4DIP	+,-	FALSE
chr1	19543783	T	C	0.00822	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr4	2743678	G	A	0.00170	TNIP2	-	FALSE
chr5	149823786	C	T	0.00327		.	FALSE
chr1	32373838	T	G	0.00376	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr1	28835937	A	G	0.00181	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	165370475	G	C	0.00256	RXRG	-	FALSE
chr5	77655342	T	C	0.00919	SCAMP1-AS1	-	TRUE	AluSx4	SINE,Alu
chr7	128294489	G	T	0.00354	LINC01000	+	FALSE
chr3	45960560	T	A	0.00201	FYCO1	-	FALSE
chr11	118875356	A	G	0.00051	CCDC84	+	TRUE
chr12	133298938	A	G	0.00034	PGAM5	+	TRUE	AluSg	SINE,Alu
chr1	93603188	A	G	0.00374	MTF2	+	FALSE
chr1	150337289	G	T	0.00020	RPRD2	+	FALSE
chr6	72012435	A	G	0.00723	OGFRL1	+	FALSE	AluSg	SINE,Alu
chr5	10435491	G	A	0.00606	MARCH6	+	FALSE
chr1	38280611	G	T	0.00955	MTF1	-	FALSE	(T)n	SINE,Alu
chr2	198416727	T	A	0.00378	HSPE1-MOB4,MOB4	+	FALSE
chr22	31375020	T	A	0.00990	TUG1	+	FALSE
chr9	96439041	A	T	0.00751	PHF2	+	FALSE
chr17	53239140	C	T	0.00954	STXBP4	+	FALSE	MIR	SINE,Alu
chr2	113513825	T	C	2.13681E-05	CKAP2L	-	FALSE
chr1	10519910	T	C	7.27344E-07		.	FALSE	AluJr	SINE,Alu
chr11	33694645	T	C	2.61039E-05	KIAA1549L	+	FALSE
chr1	10521238	T	C	0.00795	DFFA	-	TRUE	AluY	SINE,Alu
chr5	40832555	A	T	0.00347	RPL37	-	FALSE
chr1	53289852	A	G	0.00020	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	26774224	A	G	0.00295	DHDDS	+	TRUE	AluSz6	SINE,Alu
chr2	206987597	T	C	0.00085		.	FALSE	AluJb	SINE,Alu
chr2	101622886	T	A	0.00705	RPL31	+	FALSE
chr1	110040310	A	G	2.45230E-05	CYB561D1	+	FALSE
chr1	10521172	T	C	1.01590E-06	DFFA	-	TRUE	AluY	SINE,Alu
chr1	33145958	G	T	0.00080	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chrX	123046757	A	G	0.00535	XIAP	+	TRUE	AluSz	SINE,Alu
chr1	113212974	A	T	0.00424	CAPZA1	+	FALSE
chr1	54692358	G	A	0.00195	SSBP3	-	FALSE
chr1	24862649	A	G	0.00074	RCAN3	+	FALSE
chr1	55224131	T	C	0.00169	PARS2	-	FALSE
chr3	14986137	T	C	1.37684E-08	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr7	300513	T	C	2.92808E-06	FAM20C	+	FALSE
chr1	6283430	T	C	0.00751	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	179116220	T	C	0.00233	GNB4	-	TRUE	AluSz6	SINE,Alu
chr1	53288870	A	G	0.00184	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	26608018	G	A	2.25777E-05		.	FALSE
chr7	158719116	A	G	0.00824	WDR60	+	FALSE
chr18	47920424	A	G	0.00000	SKA1	+	FALSE	MER21C	SINE,Alu
chr1	160990876	C	A	1.09997E-06	F11R	-	FALSE
chr1	148556790	T	A	0.00728		.	FALSE
chr1	6283306	T	C	0.00505	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	174090321	C	A	0.00563	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr2	9770610	A	G	0.00466	YWHAQ	-	FALSE
chr1	87213182	A	T	0.00072	SH3GLB1	+	FALSE
chr11	118471800	T	A	0.00875	ARCN1	+	FALSE	AluSx3	SINE,Alu
chr2	99812447	A	G	0.00501	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	35319580	T	A	0.00988	SMIM12	-	FALSE	AluSg	SINE,Alu
chr3	99463810	G	T	0.00496	MIR548G,COL8A1	+,-	FALSE
chr17	42876730	T	C	0.00024	GJC1	-	TRUE	AluSz6	SINE,Alu
chr14	53242652	T	C	0.00081	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	36067886	T	C	1.98907E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	23636278	A	T	0.00121	HNRNPR	-	FALSE
chr1	55317685	G	A	0.00121	DHCR24	-	FALSE	MIRb	SINE,Alu
chr2	206861649	T	A	0.00066	INO80D	-	FALSE

RBP	NELFE
Knock-Method	shRNA
RBP Family	RRM_1
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR201WFU
Platform	HiSeq
Pubmed ID	32252787

NELFE - Target Gene Network