RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	38182333	G	T	0.00063	EPHA10	-	FALSE	L2d2	SINE,Alu
chr1	20976032	T	C	9.95086E-05	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	145513051	A	G	0.00269	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr10	81114959	C	T	0.00048	PPIF	+	FALSE	MSTA	SINE,Alu
chr2	24223251	A	G	0.00489	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	19543459	T	C	0.00540	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	59124223	G	A	0.00256	MYSM1	-	FALSE	MIR3	SINE,Alu
chr9	89626918	A	G	0.00048	LOC440173	-	FALSE
chr1	201846630	C	A	0.00212	IPO9	+	FALSE	(CA)n	SINE,Alu
chr2	152976703	T	A	0.00126	STAM2	-	FALSE
chr1	84373309	T	C	0.00627	TTLL7	-	FALSE
chr1	93803490	T	C	0.00572	CCDC18-AS1	-	FALSE	AluJr	SINE,Alu
chr1	26138325	G	A	0.00245	SEPN1	+	FALSE
chr1	110596569	G	A	0.00867	STRIP1	+	FALSE
chr1	145513114	A	G	0.00026	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chrX	118672600	T	C	0.00080	CXorf56	-	TRUE	AluSx	SINE,Alu
chr1	38174665	G	A	0.00475	CDCA8	+	FALSE
chr1	16889502	T	C	0.00516	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	20978332	A	T	0.00765	PINK1-AS,DDOST	-	FALSE	AluY	SINE,Alu
chr2	118854086	G	C	0.00066	INSIG2	+	FALSE
chr16	1819020	A	T	0.00258	MAPK8IP3	+	FALSE
chr3	119543179	C	A	0.00992	GSK3B	-	FALSE	(CA)n	SINE,Alu
chr1	46075724	A	G	0.00990	NASP	+	TRUE	AluSx4	SINE,Alu
chr4	36121334	C	G	0.00057	ARAP2	-	FALSE
chr1	186390303	A	C	0.00455	C1orf27	+	FALSE	L1ME3F	SINE,Alu
chr1	120611964	G	C	0.00077	NOTCH2	-	FALSE
chr4	159176109	C	A	0.00042	TMEM144	+	FALSE	MIR	SINE,Alu
chr2	232319610	A	T	0.00029	NCL	-	FALSE
chr1	36522603	A	G	0.00012		.	FALSE	AluSc	SINE,Alu
chr3	195415462	G	A	0.00140	LINC00969,SDHAP2	+	FALSE
chr1	46828700	A	G	0.00273	NSUN4	+	FALSE
chr7	127941334	C	T	0.00440	MGC27345	-	FALSE	MIR3	SINE,Alu
chr1	45474230	G	A	0.00012	HECTD3	-	FALSE
chr1	67874697	T	C	5.54610E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	44791293	A	T	0.00031	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr15	33064465	C	G	0.00735	FMN1	-	FALSE
chr1	145209366	A	G	0.00019	NBPF20,NOTCH2NL	+	FALSE
chr1	21102501	G	A	0.00148	HP1BP3	-	FALSE
chr1	19981886	T	G	0.00082	MINOS1-NBL1,NBL1	+	FALSE
chr2	70131964	A	C	0.00351	SNRNP27	+	FALSE	L1ME4a	SINE,Alu
chr3	38296817	G	A	3.46922E-11	OXSR1	+	FALSE
chr1	28825805	G	A	0.00115	PHACTR4	+	FALSE	AluSp	SINE,Alu
chr1	212114666	C	G	0.00858	INTS7	-	FALSE
chr2	206982257	T	C	0.00023		.	FALSE	AluSg7	SINE,Alu
chr1	179044242	A	G	0.00335	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	46830257	C	T	0.00208	NSUN4	+	FALSE	AluSx1	SINE,Alu
chr3	195395399	G	A	0.00556	SDHAP2	+	FALSE
chr1	204525548	A	G	0.00027	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	145284132	G	A	0.00338	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr3	44790773	T	C	0.00122	KIAA1143	-	TRUE	AluY	SINE,Alu
chr7	29960804	C	T	6.73191E-06	SCRN1	-	FALSE
chr2	29023121	G	T	0.00077	PPP1CB	+	FALSE
chr1	16933629	A	G	0.00299	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr5	133738270	T	C	5.55380E-10	CDKN2AIPNL	-	TRUE	FRAM	SINE,Alu
chr1	244572643	C	A	0.00681	ADSS	-	FALSE
chr2	96915238	T	C	2.48142E-05		.	FALSE	AluJr	SINE,Alu
chr1	62627128	A	G	2.94675E-05	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	788795	T	G	0.00333	LINC01128	+	FALSE	Charlie19a	SINE,Alu
chr2	37331065	T	C	0.00017		.	FALSE	AluSx1	SINE,Alu
chrX	77083828	T	C	1.52468E-05	MAGT1	-	TRUE	AluSz	SINE,Alu
chr7	143003525	T	A	0.00064	CASP2	+	FALSE	AluY	SINE,Alu
chr8	30536554	T	C	0.00023	GSR	-	TRUE	AluSp	SINE,Alu
chr1	204521280	A	G	0.00519	MDM4	+	TRUE	AluSp	SINE,Alu
chr3	58306666	A	G	0.00139		.	FALSE	AluSz	SINE,Alu
chr12	89914261	T	C	0.00135	POC1B,GALNT4,POC1B-GALNT4	-	FALSE
chr6	28873868	T	C	0.00041		.	FALSE	AluJo	SINE,Alu
chr1	157092835	G	A	0.00595		.	FALSE
chr6	31112484	C	T	0.00538		.	FALSE
chr1	109816462	C	T	0.00083	CELSR2	+	FALSE
chr11	65404877	G	A	0.00106	PCNX3	+	FALSE
chr1	154128831	G	T	0.00183	TPM3	-	FALSE
chr8	146035211	T	C	0.00116	ZNF517	+	FALSE	AluSx1	SINE,Alu
chr2	54896395	A	C	0.00051	SPTBN1	+	FALSE
chr5	134062605	C	T	0.00019	SEC24A	+	FALSE
chr19	19792288	A	G	0.00379	ZNF101	+	TRUE	AluJb	SINE,Alu
chr1	32385071	T	A	0.00436	PTP4A2	-	FALSE
chr1	28661692	A	G	0.00219	MED18	+	TRUE	AluSg	SINE,Alu
chr2	128952015	A	G	0.00086	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	144598641	C	T	0.00250	NBPF20	+	FALSE
chr3	15838717	A	C	0.00673	ANKRD28	-	FALSE	(A)n	SINE,Alu
chr17	5288077	G	C	0.00066	RABEP1	+	FALSE
chr2	85776987	T	A	0.00059	GGCX	-	FALSE
chr2	131906031	C	T	0.00439	PLEKHB2	+	FALSE
chr3	14528004	T	C	0.00091	SLC6A6	+	FALSE
chr1	990773	C	T	0.00705	AGRN	+	FALSE
chr1	46782446	A	G	0.00145	UQCRH	+	FALSE
chr6	31110789	T	C	0.00798		.	FALSE
chr2	98272734	A	G	0.00996	ACTR1B	-	FALSE
chr5	73932315	T	C	0.00420	ENC1	-	FALSE
chrX	77083614	T	C	6.82446E-05	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr1	145293428	G	C	0.00855	NBPF20,NBPF10	+	FALSE
chr1	52253793	C	T	0.00966	OSBPL9	+	FALSE
chr3	49396588	T	C	0.00533	RHOA	-	FALSE
chr7	43665371	A	T	0.00430	STK17A,COA1	+,-	FALSE	(AG)n	SINE,Alu
chr1	28836973	A	G	0.00017	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	33149414	A	G	5.81443E-05	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr3	14986452	T	C	0.00815	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr3	37407770	G	T	0.00530	GOLGA4	+	FALSE
chr14	69704553	G	T	7.62587E-05	EXD2	+	FALSE
chr1	16933642	G	A	0.00679	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr16	88789702	G	A	0.00125	PIEZO1	-	FALSE
chr16	29454768	A	G	0.00564	SMG1P6,BOLA2-SMG1P6	-	FALSE
chr1	24935369	A	G	0.00454	NCMAP	+	TRUE	AluJb	SINE,Alu
chr2	55459824	C	T	0.00786	RPS27A	+	FALSE
chr1	222907790	C	T	0.00253	BROX	+	FALSE
chr1	53291435	A	G	0.00790	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr20	43707759	A	G	0.00090	STK4	+	TRUE	AluJb	SINE,Alu
chr20	18468351	T	C	0.00169	RBBP9	-	TRUE	AluSz6	SINE,Alu
chrM	8859	G	A	0.00929		.	FALSE
chr5	177577138	T	C	0.00163	NHP2	-	FALSE
chr4	106767318	A	G	1.71247E-06	GSTCD	+	TRUE	AluJb	SINE,Alu
chr2	37331025	T	C	0.00055		.	FALSE	AluSx1	SINE,Alu
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr1	180063334	G	A	2.71425E-05	CEP350	+	FALSE
chr13	76378459	T	C	0.00239	LMO7	+	FALSE
chr2	204300093	A	C	0.00105	RAPH1	-	FALSE	FLAM_C	SINE,Alu
chrX	24095065	G	T	0.00291	EIF2S3	+	FALSE
chr3	10976876	A	G	0.00343	SLC6A11	+	FALSE
chr17	26672363	G	A	0.00599	TNFAIP1	+	FALSE
chr1	14604	A	G	0.00304	WASH7P	-	FALSE
chr1	10520099	T	C	6.30717E-05		.	FALSE	AluSx	SINE,Alu
chr1	144852203	T	G	0.00029	NBPF20,PDE4DIP	+,-	FALSE
chr7	6442892	C	A	0.00675	RAC1	+	FALSE
chr3	62282908	C	T	0.00281	PTPRG-AS1	-	FALSE
chr15	38645589	A	C	0.00445	SPRED1	+	FALSE
chr2	190617700	T	C	1.38394E-05	OSGEPL1	-	FALSE
chr2	210885022	C	T	0.00325	RPE	+	FALSE
chr12	56510709	G	A	0.00047	RPL41	+	FALSE
chr1	54691921	G	A	0.00010	SSBP3	-	FALSE
chr2	9629954	T	C	0.00802	ADAM17	-	FALSE
chr1	6282400	T	C	0.00385	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	10517276	T	C	0.00604		.	FALSE	AluJr	SINE,Alu
chr21	33974092	G	C	0.00865	C21orf59	-	FALSE
chr7	99649179	A	G	0.00360	ZSCAN21	+	TRUE	AluY	SINE,Alu
chr15	60678712	G	A	0.00801	ANXA2	-	FALSE
chr6	74134075	T	C	0.00018		.	FALSE	AluY	SINE,Alu
chr1	89479063	G	A	0.00076	GBP3	-	FALSE
chrX	123047295	A	G	9.23037E-05	XIAP	+	FALSE	AluSx	SINE,Alu
chr2	128603119	T	C	0.00340		.	FALSE	AluSp	SINE,Alu
chr1	144877176	C	T	0.00010	NBPF20,PDE4DIP	+,-	FALSE
chr1	109475572	A	G	0.00096	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr17	57281058	A	G	0.00061	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	200521412	G	A	0.00292	KIF14	-	FALSE
chr4	165998714	T	C	0.00254	TMEM192	-	TRUE	AluSg	SINE,Alu
chr12	64842974	C	A	0.00925		.	FALSE	AluSz	SINE,Alu
chr1	158067060	T	A	0.00778	KIRREL	+	FALSE
chr1	24288530	A	T	0.00031	PNRC2	+	FALSE
chr3	197362030	C	T	0.00302		.	FALSE
chr8	94935937	T	C	0.00338	PDP1	+	FALSE
chr1	10490539	G	C	0.00134	APITD1,APITD1-CORT	+	FALSE
chr19	45406538	C	G	0.00119	TOMM40	+	FALSE
chr1	10707812	G	A	0.00818	CASZ1	-	FALSE
chr14	103941379	C	A	0.00705	MARK3	+	FALSE
chr3	172115465	T	A	0.00170	FNDC3B	+	FALSE
chr2	31491075	A	G	0.00061	EHD3	+	FALSE
chr2	238463408	C	G	0.00644	MLPH	+	FALSE
chr5	21883662	T	G	0.00108	CDH12	-	FALSE
chr2	37331855	C	T	0.00965		.	FALSE	L1MC4	SINE,Alu
chr17	57279258	A	G	0.00095	PRR11	+	TRUE	AluSq2	SINE,Alu
chr2	128602507	T	C	4.02376E-05		.	FALSE	AluSq2	SINE,Alu
chr2	61315734	A	G	0.00396	KIAA1841	+	TRUE	AluSg	SINE,Alu
chr1	32372387	A	C	0.00757	PTP4A2	-	FALSE	(CA)n	SINE,Alu
chr7	135285707	G	A	0.00084	NUP205	+	FALSE
chr1	45244411	C	A	0.00362	RPS8	+	FALSE
chr1	25570549	C	A	0.00387	RSRP1	-	FALSE
chr1	45504720	G	C	0.00759	ZSWIM5	-	FALSE
chr2	132049915	A	G	0.00226	LOC440910	+	FALSE	AluSg4	SINE,Alu
chrX	3526616	G	A	0.00971	PRKX	-	FALSE
chr8	95805070	A	G	0.00721	DPY19L4	+	TRUE	AluYf1	SINE,Alu
chr1	92862682	A	G	0.00381		.	FALSE	AluJr	SINE,Alu
chr3	181430143	G	T	0.00126	SOX2-OT,SOX2	+	FALSE
chr2	232028396	A	G	0.00701	PSMD1	+	FALSE
chr19	58420152	C	A	0.00322	ZNF417	-	FALSE
chr3	10193683	T	G	0.00681	VHL	+	FALSE	AluJr	SINE,Alu
chr2	75888160	A	C	0.00188	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr18	19445881	T	A	0.00224	MIB1	+	FALSE
chr2	24225006	A	G	0.00555		.	FALSE	AluSx	SINE,Alu
chr1	16723840	G	A	0.00072	SZRD1	+	FALSE
chr1	197475873	G	A	0.00844	DENND1B	-	FALSE
chr1	179811337	C	A	0.00670	TOR1AIP2	-	FALSE	AluSp	SINE,Alu
chr1	16892276	T	C	0.00209	NBPF1	-	FALSE
chr16	57505662	T	G	0.00332	POLR2C	+	FALSE	(GGTGGG)n	SINE,Alu
chr3	17202334	A	C	0.00770	TBC1D5	-	FALSE
chr19	11560438	A	G	7.61449E-05	PRKCSH	+	FALSE	AluSx	SINE,Alu
chr1	1152310	C	T	0.00133	SDF4	-	FALSE
chr9	136209402	A	G	0.00431	MED22	-	FALSE	(CAGGG)n	SINE,Alu
chr1	9161203	T	C	3.69156E-05		.	FALSE	AluSx	SINE,Alu
chr4	123859284	C	T	0.00034	SPATA5	+	FALSE
chr1	20982631	G	A	0.00133	DDOST	-	FALSE
chr6	42855962	A	G	0.00781	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr19	42375624	A	G	0.00339		.	FALSE	AluSx	SINE,Alu
chr2	72968436	G	C	0.00171	EXOC6B	-	FALSE
chr1	27204516	T	C	0.00028		.	FALSE	AluSg7	SINE,Alu
chr1	179829505	T	C	0.00592	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	10368093	C	A	0.00131	KIF1B	+	FALSE
chr1	62516683	G	C	0.00966	PATJ	+	FALSE
chr2	198368112	G	A	0.00127	HSPE1,HSPE1-MOB4	+	FALSE
chr2	128602913	G	A	0.00230		.	FALSE
chr6	42045545	A	G	0.00440	TAF8	+	TRUE	AluSz	SINE,Alu
chr1	112003957	G	A	0.01000	ATP5F1	+	FALSE	Helitron2Na_Mam	SINE,Alu
chr1	28661665	A	G	0.00808	MED18	+	TRUE	AluSg	SINE,Alu
chr1	28662213	A	G	0.00013	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	179042687	A	G	0.00782	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr19	50410816	G	T	0.00050	IL4I1,NUP62	-	FALSE	AluSz	SINE,Alu
chr1	148341981	T	C	0.00226	NBPF8,NBPF14,NBPF9	-	FALSE
chr2	71298486	T	C	0.00408	NAGK	+	FALSE
chr2	86731654	G	A	0.00931	CHMP3,RNF103-CHMP3	-	FALSE	AluJr	SINE,Alu
chrX	54587290	A	G	0.00504	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr1	9427842	A	G	0.00923	SPSB1	+	FALSE
chr2	241825926	T	C	7.75373E-05	C2orf54	-	FALSE
chr3	45722253	A	G	0.00663	LIMD1,LIMD1-AS1	+,-	FALSE	AluSz	SINE,Alu
chr1	109818158	C	T	0.00628	CELSR2	+	FALSE
chr4	165998226	T	C	0.00754	TMEM192	-	TRUE	AluSx	SINE,Alu
chr10	104661031	A	G	0.00265	BORCS7-ASMT,AS3MT	+	TRUE	AluY	SINE,Alu
chr8	144357992	A	G	0.00780	GLI4	+	FALSE
chr1	171501831	A	G	0.00040	PRRC2C	+	FALSE
chr1	152186699	T	A	0.00891	HRNR	-	FALSE
chr1	16945409	T	A	0.00105	CROCCP2	-	FALSE
chr7	158679732	G	A	0.00456	WDR60	+	FALSE
chr1	110136328	T	A	0.00577	GNAI3	+	FALSE
chr7	7918285	G	A	0.00255	UMAD1	+	FALSE
chr3	49460407	C	T	0.00080	NICN1	-	FALSE	L2c	SINE,Alu
chr2	20818330	T	C	0.00228	HS1BP3	-	TRUE
chr8	41401497	A	G	0.00051	LOC102723729,GINS4	+,-	FALSE	AluSq2	SINE,Alu
chr1	32661594	C	T	0.00528	TXLNA	+	FALSE	(T)n	SINE,Alu
chr7	64023371	T	C	0.00824	ZNF680	-	FALSE
chr12	62928633	G	A	0.00307	MON2	+	FALSE
chr6	74133968	T	C	0.00431		.	FALSE	AluY	SINE,Alu
chr4	119526740	C	G	0.00435	LOC729218	+	FALSE
chr6	34845648	T	C	0.00790	TAF11	-	FALSE
chr2	202031506	A	G	0.00508	CFLAR	+	TRUE	SVA_A	SINE,Alu
chr1	182993025	C	T	0.00490	LAMC1	+	FALSE
chr4	110635486	A	G	0.00021	PLA2G12A	-	FALSE
chr1	44071221	G	A	0.00105	PTPRF	+	FALSE
chr1	16927369	C	T	0.00943	NBPF1	-	FALSE
chr1	144595886	G	A	0.00242	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	24865333	A	G	0.00087		.	FALSE	FLAM_A	SINE,Alu
chr10	70502288	G	A	0.00347	CCAR1	+	FALSE
chr4	120979130	T	C	0.00729		.	FALSE	AluSg4	SINE,Alu
chr1	142660072	T	G	0.00773		.	FALSE
chr4	165998692	T	C	0.00568	TMEM192	-	TRUE	AluSg	SINE,Alu
chr3	195635455	T	C	0.00158	TNK2	-	FALSE
chr1	214529302	C	T	0.00331	PTPN14	-	FALSE	AluJb	SINE,Alu
chrX	123047168	A	G	2.82326E-05	XIAP	+	TRUE	AluSx	SINE,Alu
chr17	1683647	T	C	0.00763	SMYD4	-	TRUE	AluJb	SINE,Alu
chr7	44841933	A	G	0.00192	PPIA	+	TRUE	AluSx	SINE,Alu
chr1	10519982	T	C	0.00417		.	FALSE	AluJr	SINE,Alu
chr8	25272364	C	G	0.00693	DOCK5	+	FALSE
chr1	16889502	T	C	5.54778E-06	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	154554940	G	C	0.00032	ADAR	-	FALSE
chr1	9161245	T	C	0.00071		.	FALSE	AluSx	SINE,Alu
chr22	18572730	A	G	6.64824E-05	PEX26	+	TRUE	AluYf1	SINE,Alu
chr17	46025078	A	G	0.00021	PNPO	+	TRUE	AluSc	SINE,Alu
chr4	39550981	T	C	5.85020E-07	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	144598755	G	A	0.00044	NBPF20	+	FALSE
chr1	160965379	T	C	0.00081	F11R	-	TRUE	AluSc	SINE,Alu
chr1	1653093	A	G	0.00036	CDK11B,CDK11A	-	FALSE	L2	SINE,Alu
chr1	36642328	C	T	0.00971	MAP7D1	+	FALSE	GA-rich	SINE,Alu
chr3	44791536	T	C	4.11776E-05	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr15	42707317	A	T	8.30558E-05	ZNF106	-	FALSE
chr2	85772404	C	A	0.00015	GGCX	-	FALSE
chr1	32681797	C	T	0.00791	DCDC2B,TMEM234	+,-	FALSE
chr1	117945049	G	A	0.00030	MAN1A2	+	FALSE
chr2	47387307	G	T	0.00035	CALM2	-	FALSE
chr1	116234083	T	A	0.00477	VANGL1	+	FALSE
chr1	109967951	A	C	0.00095	PSMA5	-	FALSE
chr4	2940091	T	C	0.00212	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	179832838	A	G	0.00018	TOR1AIP2	-	FALSE	MLT1L	SINE,Alu
chr1	142688599	A	G	0.00860		.	FALSE
chr1	1469546	G	A	0.00300	ATAD3A	+	FALSE
chr16	8902411	A	G	0.00357	PMM2	+	FALSE
chr1	36533368	A	G	0.00635		.	FALSE	AluSx	SINE,Alu
chr7	44842099	A	G	1.82502E-05	PPIA	+	TRUE
chr2	91805833	A	G	1.63980E-13		.	FALSE	MLT1H1	SINE,Alu
chr1	16577794	C	T	0.00805	FBXO42	-	FALSE
chr2	32534897	A	G	0.00680		.	FALSE	AluSx1	SINE,Alu
chr2	32534897	A	G	0.00111		.	FALSE	AluSx1	SINE,Alu
chr1	155161704	G	C	0.00034	MUC1	-	FALSE
chr1	220154768	C	T	0.00067	RNU5F-1,EPRS	+,-	FALSE
chr7	100064719	A	G	0.00276	TSC22D4	-	FALSE
chr1	19586458	A	G	0.00053	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	44463185	T	G	0.00397	SLC6A9	-	FALSE
chr1	145513098	A	G	0.00067	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	10518831	T	C	0.00410		.	FALSE	AluSx1	SINE,Alu
chr4	56236845	A	G	6.76031E-06	SRD5A3,SRD5A3-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	99813015	A	G	0.00139	MRPL30	+	TRUE	AluJb	SINE,Alu
chr3	57913810	G	A	0.00477	SLMAP	+	FALSE
chr1	10520331	C	T	2.36721E-05		.	FALSE	AluSx1	SINE,Alu
chr2	206480819	C	T	0.00663	PARD3B	+	FALSE
chr1	203277252	G	A	0.00559	BTG2	+	FALSE
chr2	7182946	T	C	0.00748	RNF144A	+	FALSE
chr1	180855948	G	A	0.00218	XPR1	+	FALSE
chr1	40722795	G	A	9.35494E-07		.	FALSE	Charlie2a	SINE,Alu
chr5	92956173	C	T	0.00646	FAM172A	-	FALSE
chr1	149913731	T	C	0.00198	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr1	27992825	G	A	0.00012	IFI6	-	FALSE
chr1	157094053	G	A	0.00740		.	FALSE	A-rich	SINE,Alu
chr1	145441841	A	T	0.00636	NBPF20,NBPF10,TXNIP	+	FALSE
chr1	179310439	C	T	0.00907	SOAT1	+	FALSE
chr1	206566195	C	T	7.54522E-05	SRGAP2	+	FALSE
chr4	17802772	G	T	0.00328	DCAF16	-	FALSE	AluSz	SINE,Alu
chr1	175129946	C	T	0.00466	KIAA0040	-	FALSE	(TCT)n	SINE,Alu
chr5	74324902	C	T	0.00574	GCNT4	-	FALSE
chr1	33068221	A	G	0.00448	ZBTB8A	+	TRUE	AluY	SINE,Alu
chr7	29960812	T	A	1.34773E-06	SCRN1	-	FALSE
chr1	154321623	G	A	0.00782	ATP8B2	+	FALSE
chr1	46164493	T	C	0.00822	IPP	-	TRUE	AluJb	SINE,Alu
chr5	130494984	A	T	0.00018	HINT1	-	FALSE
chr12	133298121	A	G	1.85542E-11	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	10520178	T	C	2.78615E-06		.	FALSE	AluSx	SINE,Alu
chr1	45279903	C	T	0.00052		.	FALSE	(TCTT)n	SINE,Alu
chr5	151041871	C	A	0.00165	SPARC	-	FALSE
chr1	161088583	T	G	0.00822	NIT1	+	FALSE
chr1	26901090	C	T	0.00952	RPS6KA1	+	FALSE
chr14	90509582	T	C	0.00017	TDP1	+	FALSE
chr1	10521130	T	C	1.15946E-05	DFFA	-	TRUE	AluY	SINE,Alu
chr1	28835937	A	G	0.00061	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr11	72003767	C	A	0.00297	CLPB	-	FALSE
chr3	42253664	C	T	0.00065	TRAK1	+	FALSE
chr1	10519064	T	C	0.00192		.	FALSE	AluSx3	SINE,Alu
chr2	175711942	C	T	8.43847E-05	CHN1	-	FALSE
chr19	49619561	T	C	2.39173E-05	LIN7B	+	FALSE
chr1	20238573	T	C	0.00204	OTUD3	+	FALSE
chr1	145513031	A	G	0.00705	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	931935	T	C	0.00913		.	FALSE
chr4	1982726	C	T	0.00828	WHSC1	+	FALSE
chr1	9416574	A	G	0.00144	SPSB1	+	FALSE
chr12	56215099	T	A	0.00227	DNAJC14	-	FALSE
chr1	220870440	G	A	0.00193	C1orf115	+	FALSE
chr2	128605225	G	A	0.00401	POLR2D	-	FALSE
chr3	33907945	A	G	3.34896E-07	PDCD6IP	+	FALSE
chr1	10520058	T	C	0.00907		.	FALSE	AluSx	SINE,Alu
chr1	12073252	A	G	0.00990	MFN2	+	FALSE
chr1	6281866	A	C	0.00102	ICMT	-	FALSE
chr4	39552174	T	C	0.00026	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	16841620	T	A	0.00023		.	FALSE
chr1	172547465	A	G	0.00725	SUCO	+	FALSE
chr1	100440563	A	G	0.00732	SLC35A3	+	FALSE	AluJb	SINE,Alu
chr1	32801694	A	C	0.00847	MARCKSL1	-	FALSE

RBP	FUS
Knock-Method	shRNA
RBP Family	zf-RanBP
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR325OOM
Platform	HiSeq
Pubmed ID	32252787

FUS - Target Gene Network