RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr12	133298121	A	G	0.00026	PGAM5	+	TRUE	AluJo	SINE,Alu
chr19	57816261	A	G	0.00156		.	FALSE	AluY	SINE,Alu
chr2	191556847	G	T	9.96724E-06	NAB1	+	FALSE
chr7	16899197	C	T	0.00926	AGR3	-	FALSE
chr1	1252441	T	C	0.00602	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr2	70504926	A	G	0.00671	PCYOX1	+	FALSE	MER5A	SINE,Alu
chr11	31452571	A	G	0.00084	DNAJC24	+	TRUE
chr1	33086876	T	C	0.00399	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr1	1662547	T	C	0.00556	SLC35E2	-	TRUE	AluY	SINE,Alu
chr6	166824702	C	T	0.00587	RPS6KA2	-	FALSE	(T)n	SINE,Alu
chr3	44791320	T	C	0.00059	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	204524866	A	G	0.00369	MDM4	+	TRUE	AluSx	SINE,Alu
chr2	37331269	T	C	0.00781		.	FALSE	AluSx1	SINE,Alu
chr7	25160004	T	C	0.00915	CYCS	-	TRUE
chr7	120740103	G	T	0.00601	CPED1	+	FALSE
chr2	217366919	A	G	0.00480		.	FALSE	AluSz6	SINE,Alu
chr1	117617705	A	G	0.00475	TTF2	+	FALSE
chr1	78201745	G	T	0.00140	USP33	-	FALSE
chr4	177252326	A	G	2.59441E-08	SPCS3	+	TRUE
chrX	77083548	T	C	0.00205	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr2	10567337	G	C	0.00940	HPCAL1	+	FALSE
chr1	214524178	T	C	0.00265	PTPN14	-	TRUE	AluSx	SINE,Alu
chr1	227071525	C	T	0.00013	PSEN2	+	FALSE
chr14	74526976	T	C	1.13179E-06	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr2	98090610	T	C	0.00832	LOC100506076	-	FALSE	L1PREC2	SINE,Alu
chr1	10517306	T	C	0.00022		.	FALSE	AluJr	SINE,Alu
chr7	130629624	T	C	0.00435	LINC-PINT	-	TRUE
chr8	10689212	C	T	3.39921E-05	PINX1	-	FALSE
chr1	16932368	T	A	0.00336	NBPF1	-	FALSE	MLT1F-int	SINE,Alu
chr2	99812429	A	G	0.00504	MRPL30	+	TRUE	AluSx	SINE,Alu
chr3	160969268	C	T	0.00835	NMD3	+	FALSE
chr7	102004748	T	C	0.00050	LOC100289561,LOC100630923	+	FALSE
chr17	42880190	T	C	0.00284	GJC1	-	TRUE	AluJb	SINE,Alu
chr1	118502771	A	G	0.00466	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr1	43272842	A	T	5.93810E-05	SVBP	-	FALSE
chr1	100440553	A	G	9.79324E-05	SLC35A3	+	TRUE	AluJb	SINE,Alu
chr9	125609941	G	A	0.00043		.	FALSE
chr1	6694574	G	A	0.00983	THAP3,DNAJC11	+,-	FALSE
chr15	38645589	A	C	0.00445	SPRED1	+	FALSE
chr1	1683565	G	A	0.00269	NADK	-	FALSE
chr1	9160958	T	C	3.87385E-05		.	FALSE	AluJb	SINE,Alu
chr1	1595603	C	G	0.00017	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr1	16576836	A	G	0.00885	FBXO42	-	FALSE
chr1	16929056	C	T	0.00398	NBPF1	-	FALSE
chr2	191065246	T	A	0.00594	C2orf88	+	FALSE
chr1	33324136	T	C	0.00739	S100PBP	+	FALSE
chr4	39550715	T	C	0.00995	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu
chr15	42859922	A	G	0.00731	HAUS2	+	TRUE	AluSx1	SINE,Alu
chrX	77083672	T	C	2.97227E-07	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr4	73922981	T	C	0.00491	COX18	-	TRUE	AluSz	SINE,Alu
chr2	31557839	G	T	0.00145	XDH	-	FALSE	AluJr	SINE,Alu
chr12	69158881	A	G	0.00219	SLC35E3	+	TRUE	AluSp	SINE,Alu
chr1	16958064	A	G	0.00446		.	FALSE
chr14	23795219	C	T	0.00201	BCL2L2-PABPN1,PABPN1	+	FALSE
chr3	37407769	A	T	0.00406	GOLGA4	+	FALSE
chr1	23833607	A	T	0.00818	E2F2	-	FALSE
chr1	92862337	A	G	0.00595		.	FALSE	AluSp	SINE,Alu
chr1	1667419	A	C	0.00028	SLC35E2	-	FALSE	AluSg	SINE,Alu
chr6	3021492	A	G	0.00613	HTATSF1P2	-	FALSE	Tigger3a	SINE,Alu
chr1	67874697	T	C	5.54610E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr15	91044381	C	A	0.00440	IQGAP1	+	FALSE
chr1	19984346	A	G	0.00071	MINOS1-NBL1,NBL1	+	FALSE
chr1	10517276	T	C	0.00604		.	FALSE	AluJr	SINE,Alu
chr4	89179595	T	C	0.00752	PPM1K	-	TRUE	AluSc	SINE,Alu
chr4	120979190	T	C	0.00970		.	FALSE	AluSg4	SINE,Alu
chr11	65179819	T	C	0.00038	FRMD8	+	FALSE
chr10	75008817	T	C	1.29877E-10	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	52817432	T	C	0.00518	CC2D1B	-	TRUE	AluSg4	SINE,Alu
chr7	5410425	G	C	0.00043	TNRC18	-	FALSE	(CACCGC)n	SINE,Alu
chr5	43175369	G	T	7.56035E-05	ZNF131	+	FALSE
chr1	179070187	G	A	0.00556	ABL2	-	FALSE
chr1	94930345	G	A	1.57139E-05	ABCD3	+	FALSE
chr1	9163328	T	C	0.00287		.	FALSE	AluSp	SINE,Alu
chr3	170609385	C	T	0.00212	EIF5A2	-	FALSE
chr1	89447720	G	A	0.00030	KYAT3,RBMXL1	-	FALSE
chr14	75202669	A	G	1.13156E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr12	62928633	G	A	0.00307	MON2	+	FALSE
chr1	19543456	T	C	0.00760	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	36067677	T	C	1.65353E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	11982544	T	C	4.37710E-05	KIAA2013	-	FALSE
chr1	16893813	A	G	0.00385	NBPF1	-	FALSE
chr8	41400022	A	G	0.00148	LOC102723729,GINS4	+,-	FALSE	AluY	SINE,Alu
chr1	1252184	A	G	0.00778	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr1	10520683	T	C	0.00790	DFFA	-	TRUE	AluSc8	SINE,Alu
chr6	90346418	A	T	1.30335E-05	LYRM2	-	FALSE	AluSz	SINE,Alu
chr5	52389811	T	G	0.00561	ITGA2	+	FALSE
chr1	153720690	G	A	0.00550	INTS3	+	FALSE
chr1	228682330	C	G	0.00509	RNF187	+	FALSE
chr1	206566948	G	A	0.00879	SRGAP2	+	FALSE
chr1	155142927	A	G	0.00877	KRTCAP2	-	FALSE
chr1	12628188	T	C	3.43513E-08	DHRS3	-	FALSE
chr1	10517352	T	C	0.00311		.	FALSE	AluJr	SINE,Alu
chr4	2940485	T	C	2.93326E-08	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	214527252	G	A	0.00181	PTPN14	-	FALSE	MADE2	SINE,Alu
chr3	99515750	A	G	0.00216	MIR548G	-	FALSE
chr4	71682381	T	C	0.00037	GRSF1	-	TRUE	AluSz6	SINE,Alu
chr2	98388810	G	T	6.24900E-05	TMEM131	-	FALSE
chr6	44417142	A	G	0.00020	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	45280109	A	G	0.00591		.	FALSE	AluYk3	SINE,Alu
chr2	187544218	T	G	0.00796	ITGAV	+	FALSE
chr1	16893691	C	A	0.00141	NBPF1	-	FALSE
chr9	136209396	C	T	0.00126	MED22	-	FALSE
chr2	242512736	G	C	0.00492	BOK	+	FALSE
chr1	1534614	T	C	5.67045E-11	FNDC10	-	FALSE
chr16	10624996	T	C	0.00059	EMP2	-	TRUE	AluSx3	SINE,Alu
chr19	21131571	A	G	0.00120	ZNF85	+	FALSE
chr3	44790636	T	C	0.00083	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	32799437	C	T	0.00318	MARCKSL1	-	FALSE
chr1	1595500	T	C	0.00482	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr12	51325237	A	G	5.73531E-05	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr1	169768080	C	A	5.53708E-05	C1orf112	+	FALSE
chr1	28859265	C	G	0.00030	RCC1	+	FALSE
chr12	56345408	T	G	0.00885	DGKA	+	FALSE
chr14	75202705	A	G	0.00017	FCF1	+	TRUE	AluSc	SINE,Alu
chr14	24760808	C	T	0.00203	DHRS1	-	FALSE
chr1	36299630	A	G	0.00828	AGO4	+	FALSE
chr10	75009781	T	C	9.15447E-06	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr1	150783968	T	A	0.00368	ARNT	-	FALSE
chr2	85548854	T	C	0.00097	TGOLN2	-	FALSE
chr4	128756738	A	G	0.00408		.	FALSE	AluSx	SINE,Alu
chr2	91805816	G	A	2.75786E-10		.	FALSE
chr1	52378211	T	C	0.00195	RAB3B	-	TRUE	FLAM_C	SINE,Alu
chr6	46128910	A	G	0.00782	ENPP5	-	FALSE	(GT)n	SINE,Alu
chr1	16893822	C	T	0.00808	NBPF1	-	FALSE
chr1	32373858	A	T	0.00100	PTP4A2	-	FALSE
chr1	145512024	A	G	0.00836	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	94335333	G	T	0.00510	DNTTIP2	-	FALSE
chr2	238673923	C	A	0.00813	LRRFIP1	+	FALSE	(CA)n	SINE,Alu
chr1	19542679	T	C	0.00575	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr2	202029999	T	G	0.00350	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chr1	6283348	T	C	0.00082	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	16892918	T	C	0.00590	NBPF1	-	FALSE
chr1	28824041	T	A	0.00627	PHACTR4	+	FALSE	AluSx	SINE,Alu
chr16	603884	C	G	0.00118	CAPN15	+	FALSE
chr1	19542458	T	C	6.76498E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	33147722	G	A	1.17176E-11	SYNC,RBBP4	+,-	FALSE
chr5	6748659	T	C	0.00032	PAPD7	+	FALSE
chr3	181430141	G	C	0.00086	SOX2-OT,SOX2	+	FALSE
chr4	6718775	G	T	3.33433E-09	BLOC1S4	+	FALSE
chr1	28939803	C	T	1.99823E-11	TAF12	-	FALSE
chr1	1718810	G	A	5.85228E-05	GNB1	-	FALSE
chr1	200375846	G	T	0.00040	ZNF281	-	FALSE	(T)n	SINE,Alu
chr2	170103351	G	T	0.00139	LRP2	-	FALSE
chr1	19542401	T	C	0.00010	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	89447720	G	A	0.00497	KYAT3,RBMXL1	-	FALSE
chr2	197004439	A	G	0.00034	STK17B	-	FALSE
chr2	74442431	T	G	0.00375		.	FALSE
chr1	93297607	C	T	0.00016	RPL5	+	FALSE
chr7	131241085	G	A	0.00600	PODXL	-	FALSE	(GCA)n	SINE,Alu
chr1	236717926	T	C	0.00029	HEATR1	-	FALSE
chr1	65693725	C	T	0.00202	AK4	+	FALSE
chr1	8072233	T	C	0.00647	ERRFI1	-	FALSE
chr1	109242607	G	A	0.00652	PRPF38B	+	FALSE
chr20	25428724	A	G	0.00789	GINS1	+	TRUE	AluJb	SINE,Alu
chr10	73994158	A	G	0.00110	ANAPC16	+	TRUE	AluJr	SINE,Alu
chr1	155695960	A	G	1.11424E-05	DAP3	+	TRUE	AluSp	SINE,Alu
chr19	13883548	A	G	0.00566	MRI1	+	TRUE	AluYk3	SINE,Alu
chr1	12677525	G	A	0.00122	DHRS3	-	FALSE	(A)n	SINE,Alu
chr8	12286546	A	G	0.00400	FAM86B2	-	FALSE
chr15	43767774	G	C	0.00057	TP53BP1	-	FALSE
chr1	40974799	T	C	0.00038	EXO5	+	FALSE
chr1	109818161	C	T	0.00382	CELSR2	+	FALSE
chrX	77083845	T	C	0.00102	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	145291217	C	T	0.00415	NBPF20	+	FALSE
chr1	6283264	T	C	0.00284	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	6283260	T	C	0.00125	ICMT	-	TRUE	AluSx3	SINE,Alu
chr2	86364710	T	C	0.00056	PTCD3	+	FALSE
chr1	26143697	G	C	0.00778	SEPN1	+	FALSE
chr1	16576295	G	A	0.00139	FBXO42	-	FALSE	A-rich	SINE,Alu
chr22	39259541	A	G	0.00134	CBX6	-	FALSE
chr1	17199803	C	T	0.00997	LOC440570	+	FALSE
chr1	85278665	A	G	0.00242		.	FALSE
chr1	233518885	T	C	0.00021	MLK4	+	FALSE	(TTTC)n	SINE,Alu
chr6	44222157	G	A	0.00856	SLC35B2	-	FALSE
chr1	9989022	A	G	0.00616	LZIC	-	FALSE	L1MB5	SINE,Alu
chr4	71683841	T	C	8.62096E-05	GRSF1	-	TRUE	AluSz	SINE,Alu
chr1	204521159	A	G	0.00158	MDM4	+	TRUE	AluSp	SINE,Alu
chr14	64152514	T	C	1.52259E-06	SGPP1	-	TRUE	(TA)n	SINE,Alu
chr1	16928737	C	T	0.00448	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	184761350	T	C	0.00754	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	24792617	T	A	0.00553	NIPAL3	+	FALSE	MER90a	SINE,Alu
chr3	136667405	T	C	0.00190	NCK1	+	FALSE
chr17	56081432	G	A	4.92367E-05	SRSF1	-	FALSE
chr3	183976477	C	T	0.00215	ECE2	+	FALSE
chr1	202696878	C	T	0.00159	KDM5B	-	FALSE
chr4	17803604	T	C	0.00174	DCAF16	-	TRUE	AluY	SINE,Alu
chrX	2824894	T	C	0.00770	ARSD	-	TRUE	AluSx1	SINE,Alu
chr2	86250101	T	C	0.00038	LOC90784	-	TRUE	AluSx	SINE,Alu
chr1	40537943	A	C	0.00115	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	149913726	T	C	8.62683E-05	OTUD7B	-	TRUE	MER96B	SINE,Alu
chr3	73116347	T	A	0.00109	PPP4R2	+	FALSE
chr3	56654600	C	G	0.00490	CCDC66,FAM208A	+,-	FALSE
chr3	44791569	T	C	0.00685	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr3	191110544	T	G	0.00031	CCDC50	+	FALSE	AluSz	SINE,Alu
chr19	11560461	A	G	0.00034	PRKCSH	+	TRUE	AluSx	SINE,Alu
chr1	53288916	A	G	0.00289	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	181026558	G	A	0.00217	MR1	+	FALSE
chr15	41590287	A	G	0.00319	OIP5-AS1	+	FALSE
chr1	179811936	T	C	0.00229	TOR1AIP2	-	FALSE	AluY	SINE,Alu
chr1	23835794	A	G	0.00132	E2F2	-	FALSE
chr1	3545199	G	C	0.00188	TPRG1L	+	FALSE
chr19	50370106	T	G	0.00359	PNKP	-	FALSE
chr11	4159457	A	G	0.00764	RRM1	+	FALSE
chr2	75888160	A	C	0.00599	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr1	20826784	T	C	0.00204	MUL1	-	FALSE
chr7	299843	G	A	6.16222E-05	FAM20C	+	FALSE
chr1	145689611	C	A	0.00142	NBPF20,NBPF10	+	FALSE	AluSg	SINE,Alu
chr10	99504630	G	T	0.00544	ZFYVE27	+	FALSE
chr1	3545196	T	C	0.00035	TPRG1L	+	FALSE
chr1	6283296	T	C	0.00122	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	203713133	G	A	0.00984	ATP2B4	+	FALSE
chr5	72801329	T	A	0.00073	BTF3	+	FALSE
chr1	205683408	C	T	0.00082	NUCKS1	-	FALSE
chr4	109734309	T	C	0.00197	COL25A1	-	FALSE
chr10	62554474	T	G	6.65730E-05	CDK1	+	FALSE
chr1	46828734	T	C	0.00604	NSUN4	+	FALSE
chr10	121437034	G	C	0.00120	BAG3	+	FALSE
chr1	3546269	C	A	0.00260	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	19542401	T	C	0.00052	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr12	125512540	A	G	7.43833E-09		.	FALSE
chr1	156613632	G	A	0.00187	BCAN	+	FALSE
chr12	9464178	G	A	0.00081	LOC642846	+	FALSE
chr2	201774775	T	C	0.00872		.	FALSE	AluJr4	SINE,Alu
chr1	6259025	C	T	0.00700	RPL22	-	FALSE
chr3	172117457	C	A	0.00037	FNDC3B	+	FALSE
chr17	57279281	A	G	0.00918	PRR11	+	TRUE	AluSq2	SINE,Alu
chr17	73940077	T	C	0.00146	ACOX1	-	TRUE	AluJb	SINE,Alu
chr3	88101339	T	C	0.00531	CGGBP1	-	FALSE
chr1	26856462	T	G	0.00201	RPS6KA1	+	FALSE
chr1	47905555	A	C	0.00661	FOXD2	+	FALSE
chr1	150281090	A	G	3.10555E-05	MRPS21	+	TRUE	AluSz	SINE,Alu
chr13	47345467	G	T	0.00495	ESD	-	FALSE
chr3	193334991	G	A	0.00473	OPA1	+	FALSE
chr5	70952934	C	T	0.00315	MCCC2	+	FALSE	MIR	SINE,Alu
chr14	95555551	C	T	0.00404	DICER1	-	FALSE
chr1	20976032	T	C	0.00010	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr2	37331565	T	C	0.00121		.	FALSE	AluJb	SINE,Alu
chr1	217688165	C	A	0.00343	GPATCH2	-	FALSE
chr2	9629953	C	A	0.00042	ADAM17	-	FALSE
chr1	33148216	A	G	0.00036	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr1	55224131	T	C	0.00169	PARS2	-	FALSE
chr1	145368461	A	C	0.00542	NBPF20,NBPF10	+	FALSE
chr3	189675270	T	G	0.00039	P3H2	-	FALSE
chr1	52381354	G	T	0.00157	RAB3B	-	FALSE
chr1	16933110	T	C	0.00821	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr5	37289051	T	C	0.00014		.	FALSE	AluSp	SINE,Alu
chr1	86049363	C	T	0.00064	CYR61	+	FALSE
chr14	75202704	A	G	2.33511E-06	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	45976261	T	A	0.00018	MMACHC	+	FALSE
chr1	23636452	A	G	0.00294	HNRNPR	-	FALSE
chr3	57612180	T	C	0.00018	DENND6A,PDE12	+,-	FALSE	AluSp	SINE,Alu
chr2	37331525	T	C	0.00140		.	FALSE	AluJb	SINE,Alu
chr1	10520487	T	C	0.00710		.	FALSE	AluSx1	SINE,Alu
chr3	160283126	A	C	0.00564	KPNA4	-	FALSE
chr4	17626174	T	A	0.00534	MED28	+	FALSE
chr2	91847987	C	G	0.00083		.	FALSE	TAR1	SINE,Alu
chr1	92862764	A	G	0.00415		.	FALSE	AluJr	SINE,Alu
chr1	91990450	A	T	0.00614	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr1	10519936	T	C	0.00349		.	FALSE	AluJr	SINE,Alu
chr9	33624856	C	T	0.00823	ANXA2P2	+	FALSE
chr1	33219771	G	C	0.00256	KIAA1522	+	FALSE
chr19	9672318	T	C	2.91158E-05		.	FALSE	AluJr	SINE,Alu
chr1	6948204	T	C	4.22429E-07	CAMTA1	+	FALSE	L2a	SINE,Alu
chr5	81571876	A	T	0.00092	RPS23	-	FALSE
chr6	114181223	A	G	0.00365	MARCKS	+	FALSE
chr1	53679610	G	A	0.00084	CPT2	+	FALSE	AluSz	SINE,Alu
chr1	19586520	A	G	0.00846	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	10520153	T	C	0.00907		.	FALSE	AluSx	SINE,Alu
chr5	149823786	C	T	0.00327		.	FALSE
chr1	50883798	T	C	0.00156	DMRTA2	-	FALSE
chr1	15909744	C	T	0.00100	AGMAT	-	FALSE
chr7	138732191	T	C	0.00746	ZC3HAV1	-	TRUE	MER5B	SINE,Alu
chr1	10517276	T	C	0.00079		.	FALSE	AluJr	SINE,Alu
chr1	19543247	T	C	5.23836E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	10192720	A	G	0.00110	VHL	+	TRUE	AluSx1	SINE,Alu
chr5	150578574	A	G	0.00447	CCDC69	-	FALSE
chr10	120801786	G	C	0.00752	EIF3A	-	FALSE
chr1	26143731	A	G	0.00337	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	94995225	G	A	0.00344	F3	-	FALSE
chr1	114443458	A	G	0.00320	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr19	3053116	G	C	0.00276	AES	-	FALSE
chr7	94297301	G	T	0.00145	PEG10	+	FALSE
chr1	33071096	A	G	0.00692	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	200375837	T	G	0.00429	ZNF281	-	FALSE	(T)n	SINE,Alu
chr1	181057874	T	G	0.00099	IER5	+	FALSE
chr5	174956218	A	G	0.00953	SFXN1	+	TRUE	AluSp	SINE,Alu
chr15	72635903	C	T	0.00334	HEXA	-	FALSE
chr1	19542679	T	C	0.00738	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr8	30536583	T	C	0.00031	GSR	-	TRUE	AluSp	SINE,Alu
chr1	40537937	A	C	0.00091	CAP1	+	FALSE	(A)n	SINE,Alu
chr15	40712737	T	C	0.00525	IVD	+	FALSE
chr19	47278340	A	G	0.00449	SLC1A5	-	FALSE	(AC)n	SINE,Alu
chr1	47903063	G	C	0.00292	FOXD2	+	FALSE
chr1	3416449	C	A	0.00748	MEGF6	-	FALSE
chr12	7074517	C	T	0.00369	PHB2	-	FALSE
chr2	61278017	A	G	8.96590E-05	PEX13	+	TRUE	AluY	SINE,Alu
chr1	24086788	C	T	0.00040	TCEB3	+	FALSE
chr5	130729522	T	G	0.00506	CDC42SE2	+	FALSE	(T)n	SINE,Alu
chr3	15112631	A	G	0.00019	RBSN	-	FALSE
chr3	10255002	C	G	0.00043	IRAK2	+	FALSE
chr2	216903544	T	C	0.00929	PECR	-	TRUE	AluSx3	SINE,Alu
chr1	20976078	T	C	0.00344	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	36067760	T	C	0.00768	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	67874859	T	C	0.00374	SERBP1	-	TRUE	AluSx	SINE,Alu
chr1	16945227	G	T	0.00139	CROCCP2	-	FALSE
chr1	33149502	A	G	0.00045	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	53291344	A	G	0.00088	ZYG11B	+	FALSE	(A)n	SINE,Alu
chr1	109465168	T	A	0.00246	GPSM2	+	FALSE
chr1	153533813	A	T	0.00451	S100A2	-	FALSE
chr2	37327669	T	C	0.00566		.	FALSE
chr1	145689601	A	G	0.00517	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr1	201939479	T	A	0.00645	TIMM17A	+	FALSE
chr2	232574807	C	G	0.00134	PTMA	+	FALSE
chr3	10004768	G	A	3.85967E-05	EMC3	-	FALSE	Tigger14a	SINE,Alu
chr5	140594467	G	A	0.00045	PCDHB13	+	FALSE
chr2	46524711	C	T	0.00513	EPAS1	+	FALSE
chr5	79923912	T	C	0.00037	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	52520867	T	A	0.00206	TXNDC12	-	FALSE
chr1	148004422	T	A	0.00017	NBPF8	-	FALSE
chr5	6491892	G	A	0.00707	UBE2QL1	+	FALSE
chr10	15120275	T	C	0.00387	ACBD7	-	TRUE	L1PA7	SINE,Alu
chr2	55516941	C	T	0.00110	CCDC88A	-	FALSE
chr3	88104073	G	C	0.00887	CGGBP1	-	FALSE
chr2	61277835	A	G	0.00105	PEX13	+	TRUE	AluY	SINE,Alu
chr7	38764332	T	C	0.00209	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	36282608	G	T	0.00886	AGO4	+	FALSE
chr1	10042987	A	G	0.00149	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	201860626	A	G	0.00599	SHISA4	+	FALSE
chr5	178293266	G	A	0.00924	ZNF354B	+	FALSE
chr1	89525966	T	C	0.00039	GBP1	-	FALSE
chr1	33148706	A	G	0.00050	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr5	95130803	T	C	0.00531	RHOBTB3	+	FALSE	AluSz	SINE,Alu
chr11	94863488	C	T	0.00615	ENDOD1	+	FALSE
chr3	197400501	C	G	0.00011	RUBCN	-	FALSE
chr8	87485483	G	C	0.00554	RMDN1	-	FALSE
chr2	37331025	T	C	0.00029		.	FALSE	AluSx1	SINE,Alu
chr4	39550978	T	C	3.11849E-06	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	6582149	T	C	0.00173	NOL9	-	TRUE	AluSq4	SINE,Alu
chr3	23958355	C	T	0.00997	NKIRAS1,RPL15	+,-	FALSE
chr9	131872857	C	G	0.00151	CRAT	-	FALSE
chr1	26449327	A	G	0.00330	PDIK1L	+	FALSE
chr1	155403831	A	G	0.00676	ASH1L,POU5F1P4	+,-	FALSE
chr1	39470979	C	A	0.00160	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr1	31905887	A	C	4.57629E-05	SERINC2	+	FALSE
chr1	900725	T	G	0.00110	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr9	115447527	T	C	0.00200	INIP	-	TRUE	AluJb	SINE,Alu
chr3	69151152	C	A	0.00750	ARL6IP5	+	FALSE
chr8	25272423	G	T	0.00659	DOCK5	+	FALSE
chr8	48889659	A	G	1.71928E-05	MCM4	+	TRUE	AluSx3	SINE,Alu
chr1	47716042	A	T	0.00574	STIL	-	FALSE
chr2	206983087	T	C	0.00364		.	FALSE	AluJb	SINE,Alu
chr3	195411991	C	A	0.00058	SDHAP2	+	FALSE
chr16	88891240	C	A	0.00826	GALNS	-	FALSE
chr17	46941448	G	T	0.00017	CALCOCO2	+	FALSE	AluSz6	SINE,Alu
chr4	120979178	T	C	0.00433		.	FALSE	AluSg4	SINE,Alu
chr1	28785597	G	C	0.00595	PHACTR4	+	FALSE
chr5	41919747	C	T	0.00814	C5orf51	+	FALSE	L2c	SINE,Alu
chr1	28661692	A	G	0.00219	MED18	+	TRUE	AluSg	SINE,Alu
chr1	1337737	G	C	2.51903E-05	MRPL20	-	FALSE
chr1	205687351	T	C	2.02150E-05	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	6282401	T	C	0.00806	ICMT	-	TRUE	AluSz	SINE,Alu
chr2	217498311	T	C	0.00977	IGFBP2	+	FALSE	(CCG)n	SINE,Alu
chr1	10520174	T	C	0.00158		.	FALSE	AluSx	SINE,Alu
chr1	153907297	C	T	3.91411E-05	DENND4B	-	FALSE	(CTG)n	SINE,Alu
chr19	58356478	A	G	0.00030	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr1	6282400	T	C	0.00132	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	880052	C	T	0.00231	NOC2L	-	FALSE
chr1	45244411	C	A	0.00362	RPS8	+	FALSE
chr1	46500251	G	A	0.00205	MAST2	+	FALSE
chr1	246829742	T	C	0.00037	CNST	+	FALSE	(TGTG)n	SINE,Alu
chr1	33149486	A	G	0.00874	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr4	139091459	T	C	9.74854E-05	SLC7A11-AS1,SLC7A11	+,-	FALSE	(TA)n	SINE,Alu
chr3	109045430	G	A	4.43689E-05	DPPA4	-	FALSE
chr3	63996262	C	T	0.00273	PSMD6-AS2,PSMD6	+,-	FALSE
chr1	16944953	T	G	0.00158	CROCCP2	-	FALSE
chr12	49745500	A	G	0.00265	DNAJC22	+	TRUE	AluSx3	SINE,Alu
chr1	45975669	A	G	0.00695	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr4	42003671	A	G	0.00535	SLC30A9	+	FALSE
chr1	9163290	T	C	0.00016		.	FALSE	AluSp	SINE,Alu
chr7	128143945	A	G	0.00607		.	FALSE	AluSq2	SINE,Alu
chr1	1717502	T	G	0.00239	GNB1	-	FALSE
chr14	103941379	C	A	0.00705	MARK3	+	FALSE
chr2	37429737	A	G	3.16512E-05	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr3	15114486	T	C	3.99101E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr1	42886523	T	C	0.00649	RIMKLA	+	FALSE	MIRc	SINE,Alu
chr1	10521260	T	C	0.00658	DFFA	-	TRUE	AluY	SINE,Alu
chr1	45975574	A	G	0.00050	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	113455441	C	A	0.00020	SLC16A1	-	FALSE	(A)n	SINE,Alu
chr3	52873072	A	C	0.00233	TMEM110-MUSTN1,TMEM110	-	FALSE
chr1	10520819	T	C	0.00022	DFFA	-	TRUE	AluSc8	SINE,Alu
chr8	37717121	C	A	0.00087	RAB11FIP1	-	FALSE
chr19	4428790	A	T	0.00000	CHAF1A	+	FALSE
chr2	75120158	A	T	0.00222	HK2	+	FALSE
chr4	17803026	T	C	0.00396	DCAF16	-	TRUE	AluSz	SINE,Alu
chr5	40715440	A	C	0.00646	TTC33	-	FALSE
chr2	191224981	G	T	0.00245	INPP1	+	FALSE
chr3	40353799	G	T	0.00906	EIF1B	+	FALSE
chr19	4654601	A	G	0.00016	TNFAIP8L1	+	TRUE	AluJb	SINE,Alu
chr2	242447628	T	G	0.00674	STK25	-	FALSE
chr1	46830430	G	A	0.00023	NSUN4	+	FALSE	LTR108a_Mam	SINE,Alu
chr17	65335362	T	C	3.02375E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr3	69038160	G	A	0.00557	EOGT	-	FALSE
chr1	1344998	A	G	0.00235		.	FALSE	AluSg	SINE,Alu
chr1	44171143	C	A	0.00118	KDM4A-AS1,KDM4A	+,-	FALSE
chr1	87328401	A	T	0.00946	SEP15	-	FALSE
chr19	1981317	T	A	0.00539	CSNK1G2	+	FALSE
chr1	16893763	T	C	0.00996	NBPF1	-	FALSE
chr19	49619561	T	C	2.39173E-05	LIN7B	+	FALSE
chr1	36067851	T	C	0.00269	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	220231997	T	C	0.00244	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr1	95658358	T	C	0.00633	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	71532815	G	A	0.00712	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr14	90871942	C	A	0.00057	CALM1	+	FALSE
chr1	202993056	T	C	0.00046	TMEM183A	+	FALSE
chr1	21545089	C	T	0.00010	ECE1	-	FALSE	AluSx1	SINE,Alu
chr4	56237899	A	G	0.00503	SRD5A3,SRD5A3-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	16889633	T	C	0.00217	NBPF1	-	TRUE
chr1	8412989	A	G	0.00225	RERE	-	FALSE
chr1	113455427	T	A	0.00814	SLC16A1	-	FALSE
chr16	88785189	T	C	0.00636	PIEZO1	-	TRUE	AluJr	SINE,Alu
chr1	10518826	T	C	0.00292		.	FALSE	AluSx1	SINE,Alu
chr16	81064656	A	G	0.00120	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	28825486	A	G	0.00049	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	990380	C	T	3.90118E-06	AGRN	+	FALSE
chr7	64441632	A	T	0.00038	ZNF117	-	FALSE
chr2	55255314	A	C	0.00638	RTN4	-	FALSE
chr2	223436459	A	T	1.48017E-05	FARSB	-	FALSE
chr7	44841239	T	A	0.00199	PPIA	+	FALSE
chr11	62407518	T	C	3.11115E-06	GANAB	-	TRUE	AluY	SINE,Alu
chr2	217366515	A	G	0.00357		.	FALSE	AluSz	SINE,Alu
chr2	172413267	G	C	0.00938	CYBRD1	+	FALSE
chr1	24999468	G	T	0.00075	SRRM1	+	FALSE	(T)n	SINE,Alu
chr3	14239845	G	A	0.00375	LSM3	+	FALSE
chr15	35272171	T	C	0.00183	ZNF770	-	FALSE
chr5	109204057	T	A	0.00614	MAN2A1	+	FALSE
chr1	16927369	C	T	0.00943	NBPF1	-	FALSE
chr16	15023271	G	A	0.00403		.	FALSE
chr17	28506279	G	A	0.00634	NSRP1	+	FALSE
chr19	49232226	G	A	0.00887	RASIP1	-	FALSE
chr2	176042871	A	T	0.00204	ATP5G3	-	FALSE
chr3	156259340	T	C	0.00070	SSR3	-	TRUE	AluSq2	SINE,Alu
chr3	53319203	C	G	0.00453	DCP1A	-	FALSE
chr1	207219603	T	C	0.00429	YOD1	-	FALSE
chr3	197611048	A	G	0.00064		.	FALSE	AluSx1	SINE,Alu
chr1	38280611	G	T	0.00670	MTF1	-	FALSE	(T)n	SINE,Alu
chr3	197612430	A	G	0.00095		.	FALSE	AluSp	SINE,Alu
chr19	21474901	T	C	1.34658E-06	ZNF708	-	TRUE	AluSc	SINE,Alu
chr2	86252038	T	C	0.00931	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr7	26708303	G	T	0.00095	SKAP2	-	FALSE	AluSx3	SINE,Alu
chr3	42266360	T	C	0.00279	TRAK1	+	FALSE
chr1	569803	G	A	0.00695		.	FALSE
chr11	124954212	C	A	0.00827	SLC37A2	+	FALSE
chr2	100897573	G	A	0.00231	LONRF2	-	FALSE
chr1	153782688	G	T	0.00032	GATAD2B	-	FALSE
chr1	145116141	G	A	0.00266	NBPF20,SEC22B	+	FALSE
chr6	38140505	A	G	0.00109	BTBD9	-	FALSE
chr2	36776054	C	T	0.00117	CRIM1	+	FALSE
chr1	16893763	T	C	0.00159	NBPF1	-	FALSE
chr8	30536437	T	C	0.00062	GSR	-	FALSE	AluSp	SINE,Alu
chr1	68940566	A	C	0.00126	DEPDC1	-	FALSE
chr1	11782984	A	G	0.00107		.	FALSE	AluSx	SINE,Alu
chr1	155695968	A	G	0.00017	DAP3	+	TRUE	AluSp	SINE,Alu
chr1	118502731	T	G	0.00155	WDR3,SPAG17	+,-	FALSE
chr1	26131654	G	A	0.00149	SEPN1	+	FALSE
chr3	48787640	T	C	0.00038	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr1	120497841	T	C	0.00673	NOTCH2	-	FALSE
chr3	194361768	C	T	1.49766E-06	LSG1	-	FALSE	MSTA	SINE,Alu
chr1	58999651	T	G	0.00980	OMA1	-	FALSE
chr6	97592894	A	C	0.00654	MMS22L	-	FALSE
chr1	179042551	A	G	0.00336	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr2	61764916	A	C	0.00361	XPO1	-	FALSE	(AC)n	SINE,Alu
chr1	121115958	T	C	0.00818	SRGAP2-AS1,SRGAP2D,SRGAP2B,SRGAP2C	+,-	FALSE
chr1	226333556	C	A	0.00250	ACBD3	-	FALSE	(CAAAA)n	SINE,Alu
chr3	101399939	G	T	1.18387E-05	RPL24	-	FALSE
chr3	24019987	A	C	0.00563	NR1D2	+	FALSE
chr1	193058937	C	T	0.00195	TROVE2	+	FALSE	AluSc	SINE,Alu
chr17	10578246	A	G	0.00093		.	FALSE
chr1	9160996	T	C	0.00023		.	FALSE	AluJb	SINE,Alu
chr1	23636875	T	A	0.00686	HNRNPR	-	FALSE
chr15	77403107	C	A	3.43068E-05	PEAK1	-	FALSE
chr2	218696215	A	G	0.00915	TNS1	-	FALSE
chr1	16912099	G	C	0.00928	NBPF1	-	FALSE
chr1	17393261	T	C	3.60266E-05	PADI2	-	FALSE
chr1	145689701	A	G	0.00765	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	789187	C	G	5.07459E-05	LINC01128	+	FALSE
chr12	133298125	A	G	0.00025	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	205320515	A	G	0.00022	KLHDC8A	-	FALSE
chr1	10043363	A	G	0.00429	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr1	19542455	T	C	0.00048	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	45721989	A	G	0.00713	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu

RBP	ESF1
Knock-Method	shRNA
RBP Family	NUC153
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR060IWW
Platform	HiSeq
Pubmed ID	32252787

ESF1 - Target Gene Network