RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	10517635	T	C	0.00124		.	FALSE	AluSx1	SINE,Alu
chr16	2553869	A	T	0.00089	TBC1D24	+	FALSE
chr5	122165482	C	T	0.00367	SNX2	+	FALSE	(AC)n	SINE,Alu
chr1	205320515	A	G	0.00022	KLHDC8A	-	FALSE
chr8	146200271	T	C	0.00182	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr4	165998958	T	C	0.00021	TMEM192	-	TRUE	Alu	SINE,Alu
chr10	121437033	T	G	0.00357	BAG3	+	FALSE
chr1	244571947	C	T	0.00775	ADSS	-	FALSE
chr14	74524774	T	C	0.00906	BBOF1,ALDH6A1	+,-	FALSE	AluSc8	SINE,Alu
chr2	37327651	T	C	0.00395		.	FALSE
chr1	3545186	T	G	0.00314	TPRG1L	+	FALSE
chr1	45671430	A	T	0.00041	ZSWIM5	-	FALSE
chr1	21793735	C	G	0.00405	NBPF3	+	FALSE
chr9	32425898	T	C	0.00177	ACO1	+	FALSE
chr14	53243434	T	C	0.00421	GNPNAT1	-	TRUE	AluSx3	SINE,Alu
chr1	145500917	G	C	0.00930	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	146495574	C	T	0.00085	LOC728989	-	FALSE
chr4	4864940	C	T	0.00247	MSX1	+	FALSE
chr4	1205667	A	C	0.00990	CTBP1-AS,CTBP1	+,-	FALSE	(A)n	SINE,Alu
chr1	19585493	A	G	3.52757E-05	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr7	17384882	A	G	8.88136E-05	AHR	+	TRUE	AluSc	SINE,Alu
chr1	93828523	T	A	0.00155		.	FALSE
chr15	65442523	G	A	0.00068	CLPX	-	FALSE	AluSg4	SINE,Alu
chr1	36642420	T	C	0.00188	MAP7D1	+	FALSE
chr1	214813487	A	G	0.00027	CENPF	+	FALSE
chr1	201438098	T	G	2.75480E-05	PHLDA3	-	FALSE
chr1	8045340	C	A	0.00285	PARK7	+	FALSE
chr15	39880358	C	T	0.00028	THBS1	+	FALSE
chr19	41220529	C	T	0.00175	COQ8B	-	FALSE
chr1	3545200	G	A	0.00676	TPRG1L	+	FALSE
chr2	86252198	T	C	0.00076	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	16889563	C	A	0.00090	NBPF1	-	FALSE
chr2	99812311	A	G	0.00016	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	10516656	C	T	0.00808		.	FALSE
chr1	25570561	T	A	0.00425	RSRP1	-	FALSE	Alu	SINE,Alu
chr9	124095000	T	G	0.00764	GSN	+	FALSE	(TG)n	SINE,Alu
chr4	2940098	T	C	0.00034	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	145509569	A	G	0.00777	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	1653046	T	A	0.00217	CDK11B,CDK11A	-	FALSE
chr2	86249930	T	C	6.06022E-05	LOC90784	-	TRUE	AluJr	SINE,Alu
chr2	208619320	A	G	0.00339	CCNYL1	+	FALSE	EutTc1-N1	SINE,Alu
chr1	36067760	T	C	0.00768	PSMB2	-	TRUE	AluSz	SINE,Alu
chr15	90815787	A	G	0.00055		.	FALSE	FRAM	SINE,Alu
chr2	72968438	G	T	0.00147	EXOC6B	-	FALSE
chr5	40826639	A	G	0.00978	LOC100506548	-	FALSE	LTR78	SINE,Alu
chr1	12071680	A	G	0.00127	MFN2	+	FALSE
chr3	184429718	A	G	0.00914	MAGEF1	-	FALSE
chr1	10520067	T	C	2.08449E-05		.	FALSE	AluSx	SINE,Alu
chr2	234775941	A	G	0.00161	MSL3P1	-	FALSE
chr17	79004271	T	C	0.00200	BAIAP2-AS1	-	FALSE	AluSq2	SINE,Alu
chr1	110604747	G	A	0.00739	ALX3	-	FALSE
chr1	36770605	C	T	8.58098E-05	THRAP3	+	FALSE	(T)n	SINE,Alu
chr4	57326186	A	G	0.00203	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	16953672	C	T	0.00243	CROCCP2	-	FALSE
chr16	48386442	A	G	0.00824	LONP2,MIR5095	+	TRUE	AluSz6	SINE,Alu
chr15	34634033	A	G	0.00939	NOP10	-	FALSE
chr1	67874731	T	C	0.00817	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	27877418	G	A	0.00347	AHDC1	-	FALSE
chr3	53263333	G	A	0.00329	TKT	-	FALSE
chr2	178406763	T	C	0.00452	AGPS	+	FALSE
chr3	183209036	T	C	1.78981E-05	KLHL6	-	TRUE	AluSq	SINE,Alu
chr2	55462744	C	A	0.00033	RPS27A	+	FALSE
chr1	65330637	C	T	0.00251	JAK1	-	FALSE
chr1	15909850	C	G	0.00660	AGMAT	-	FALSE
chr1	210025751	G	A	4.42687E-05	DIEXF	+	FALSE	Tigger4a	SINE,Alu
chr1	52381350	T	G	4.39398E-08	RAB3B	-	FALSE
chr8	30536606	T	C	0.00017	GSR	-	TRUE	AluSp	SINE,Alu
chr1	19953120	G	A	0.00197	MINOS1,MINOS1-NBL1	+	FALSE
chr13	47325380	G	A	0.00270	LRCH1	+	FALSE
chr1	46774813	C	G	0.00766	UQCRH	+	FALSE
chr1	184762524	T	C	0.00471	FAM129A	-	TRUE	AluSz	SINE,Alu
chr3	196670090	G	A	6.78352E-09	NCBP2-AS2	+	FALSE
chrX	118672600	T	C	0.00080	CXorf56	-	TRUE	AluSx	SINE,Alu
chr17	18111804	T	G	0.00487	ALKBH5	+	FALSE	(TTTTGTT)n	SINE,Alu
chr1	10518821	T	C	0.00913		.	FALSE	AluSx1	SINE,Alu
chr3	194998813	A	G	0.00572	ACAP2	-	FALSE	AluSx1	SINE,Alu
chr2	220416942	G	C	0.00100	OBSL1	-	FALSE
chr6	33269307	T	C	0.00645		.	FALSE	AluSx	SINE,Alu
chr1	9160989	T	C	0.00092		.	FALSE	AluJb	SINE,Alu
chr15	42503336	C	T	0.00916	TMEM87A	-	FALSE	(T)n	SINE,Alu
chr1	204393480	T	A	0.00783	PIK3C2B	-	FALSE
chr2	128949342	A	G	0.00397	UGGT1	+	TRUE	AluSg	SINE,Alu
chr1	160062340	G	A	0.00967	IGSF8	-	FALSE
chr19	19791274	A	G	7.64703E-05	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr10	119766673	T	G	0.00082	RAB11FIP2	-	FALSE
chr4	763539	G	C	0.00816	PCGF3	+	FALSE
chr2	216300795	C	G	0.00641		.	FALSE
chr1	9161137	T	C	0.00087		.	FALSE	AluSx	SINE,Alu
chr2	239355561	A	G	0.00343	ASB1	+	FALSE
chr4	139966801	A	G	0.00282	NOCT	+	TRUE	AluYj4	SINE,Alu
chr1	148251079	T	C	0.00378	NBPF8,NBPF14,NBPF9	-	FALSE	L1MC4	SINE,Alu
chr1	100361925	G	A	0.00181	AGL	+	FALSE
chr1	10042987	A	G	0.00199	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr2	178406767	A	T	0.00416	AGPS	+	FALSE
chr1	10521254	T	C	0.00684	DFFA	-	TRUE	AluY	SINE,Alu
chr1	70696395	A	T	0.00364	SRSF11	+	FALSE
chr3	191114266	T	C	0.00258	CCDC50	+	FALSE
chr1	156495520	T	A	0.00048	IQGAP3	-	FALSE
chr9	132575836	A	C	0.00546	TOR1A	-	FALSE
chr2	31491690	T	C	0.00335		.	FALSE
chr7	77409288	A	G	7.47972E-05		.	FALSE	AluSc	SINE,Alu
chr17	49042386	T	C	4.28426E-05	SPAG9	-	TRUE	AluJb	SINE,Alu
chr1	40147817	C	A	0.00982	HPCAL4	-	FALSE
chr1	20224152	G	A	0.00581	OTUD3	+	FALSE
chr1	145689491	A	G	0.00701	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr2	37327676	T	C	0.00462		.	FALSE
chr3	15112612	T	C	0.00634	RBSN	-	TRUE	AluSq2	SINE,Alu
chr19	3121451	C	T	0.00567	GNA11	+	FALSE
chr3	196079280	T	C	0.00614		.	FALSE	AluSx	SINE,Alu
chr1	16890176	A	C	0.00753	NBPF1	-	FALSE
chr8	92075904	T	C	0.00242	OTUD6B-AS1	-	FALSE	LTR67B	SINE,Alu
chr1	14106404	G	C	0.00156	PRDM2	+	FALSE
chr3	5258985	T	C	0.00436	EDEM1	+	FALSE
chr1	109465168	T	A	0.00246	GPSM2	+	FALSE
chr6	29911970	G	A	0.00284		.	FALSE
chr5	180663941	G	T	0.00166	RACK1	-	FALSE
chr4	177252326	A	G	2.59441E-08	SPCS3	+	TRUE
chr2	128951094	A	G	0.00415	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	205683407	T	A	0.00034	NUCKS1	-	FALSE
chr1	111682307	G	C	5.71833E-05	DRAM2,CEPT1	+,-	FALSE
chr2	47387306	G	T	0.00026	CALM2	-	FALSE
chr1	38463504	C	T	0.00068	FHL3	-	FALSE
chr12	125511226	A	G	0.00205	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	10520532	T	C	0.00013		.	FALSE	AluSx1	SINE,Alu
chr2	76672504	A	G	2.97414E-06		.	FALSE	7SK	SINE,Alu
chr1	6282236	T	C	0.00388	ICMT	-	TRUE	AluSz	SINE,Alu
chr10	28971536	A	T	0.00815	BAMBI	+	FALSE
chr1	19542455	T	C	0.00263	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr3	40578843	A	G	0.00221	ZNF621	+	TRUE	AluJr	SINE,Alu
chr1	144916748	C	G	0.00354	NBPF20,PDE4DIP	+,-	FALSE
chr1	15990929	C	A	0.00202		.	FALSE	AluSx3	SINE,Alu
chr2	198255334	A	T	0.00551		.	FALSE
chr1	16926980	T	C	0.00062	NBPF1	-	FALSE
chr2	17965699	C	T	0.00497	GEN1	+	FALSE	L1M4	SINE,Alu
chr6	74134823	T	C	0.00305		.	FALSE	AluSz	SINE,Alu
chr3	113528892	A	T	8.78648E-05	ATP6V1A	+	FALSE	AluSp	SINE,Alu
chr1	19543459	T	C	0.00540	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	220231455	T	C	0.00274	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	150704418	T	C	0.00420	CTSS	-	TRUE	AluJo	SINE,Alu
chr7	91742141	T	A	0.00620	CYP51A1	-	FALSE	AluSx3	SINE,Alu
chr1	161088583	T	G	0.00745	NIT1	+	FALSE
chr1	10520505	T	C	0.00011		.	FALSE	AluSx1	SINE,Alu
chr1	327441	A	G	1.08612E-09		.	FALSE
chr2	32535865	A	G	0.00684		.	FALSE	AluJb	SINE,Alu
chr3	57611237	A	G	9.49839E-05	DENND6A,PDE12	+,-	FALSE
chr1	203839215	T	A	0.00692	SNRPE	+	FALSE
chr1	33148691	A	G	0.00547	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr2	24223256	A	G	0.00711	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	27202812	T	C	0.00388		.	FALSE	AluSq2	SINE,Alu
chr2	47604176	C	T	0.00328	EPCAM	+	FALSE
chr3	15112630	C	T	0.00017	RBSN	-	FALSE	AluSq2	SINE,Alu
chr2	198339559	G	T	0.00712	COQ10B	+	FALSE
chr1	160966353	T	C	0.00385	F11R	-	TRUE	AluSg	SINE,Alu
chr6	138412313	A	G	0.00092	PERP	-	FALSE
chr1	19633555	G	A	0.00219	AKR7A2	-	FALSE
chr1	78184325	A	G	0.00150	USP33	-	FALSE
chr2	38975954	A	C	0.00381	SRSF7	-	FALSE
chr3	14986471	T	C	3.70393E-05	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	1469546	G	A	0.00331	ATAD3A	+	FALSE
chr5	96429362	A	T	0.00907	LIX1	-	FALSE
chr1	3545199	G	C	0.00188	TPRG1L	+	FALSE
chr1	155030557	A	C	0.00883	LOC100505666,ADAM15	+,-	FALSE
chr1	19542464	T	C	0.00140	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	85785548	C	T	0.00220	DDAH1	-	FALSE
chr2	38971643	T	A	0.00013	SRSF7	-	FALSE
chr1	19585553	A	G	0.00039	MRTO4	+	TRUE	AluSc8	SINE,Alu
chr1	26144435	C	G	0.00129	SEPN1	+	FALSE
chr1	24022912	G	A	4.29449E-05	RPL11	+	FALSE
chr1	160967938	T	C	0.00270	F11R	-	TRUE	AluSp	SINE,Alu
chr1	160966434	T	C	0.00175	F11R	-	TRUE	AluSg	SINE,Alu
chr6	32148031	A	G	1.10299E-06		.	FALSE
chr17	7482018	C	A	9.29146E-05	SENP3-EIF4A1,EIF4A1	+	FALSE
chr1	10520378	T	C	0.00743		.	FALSE	AluSx1	SINE,Alu
chrX	123045103	A	G	0.00996	XIAP	+	TRUE	AluSp	SINE,Alu
chr1	202993056	T	C	0.00046	TMEM183A	+	FALSE
chr1	148251875	T	C	0.00436	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	16933642	G	A	0.00679	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr17	74561213	A	G	0.00241	SNHG16	+	FALSE
chr1	46828657	C	T	0.00378	NSUN4	+	FALSE
chr13	50487353	T	C	0.00538	SPRYD7	-	TRUE	AluSg	SINE,Alu
chr4	152583924	A	T	0.00284	FAM160A1	+	FALSE
chr17	55752444	C	T	0.00000	MSI2	+	FALSE
chr1	36067784	T	C	1.68158E-09	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	19543249	T	C	0.00564	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	145324364	C	G	0.00157	NBPF20,NBPF10	+	FALSE
chr1	150241230	G	T	7.51943E-05	APH1A	-	FALSE
chr1	138980	G	T	0.00608	LOC729737	-	FALSE
chr1	70718272	A	T	0.00166		.	FALSE
chr5	149363273	A	G	0.00587	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr19	9672465	T	C	0.00155		.	FALSE	AluJr	SINE,Alu
chr3	12877522	A	T	0.00956	RPL32	-	FALSE
chr1	93827995	C	T	0.00714	DR1	+	FALSE
chr1	28825337	A	G	0.00099	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr5	125961447	A	G	0.00025	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	95362514	G	T	0.00279	CNN3	-	FALSE
chr1	228881190	T	G	0.00043	RHOU	+	FALSE
chr1	9328094	A	G	0.00107	H6PD	+	TRUE	AluJr	SINE,Alu
chr19	48753070	T	C	0.00214	CARD8	-	TRUE
chr3	119543179	C	A	0.00992	GSK3B	-	FALSE	(CA)n	SINE,Alu
chr9	91724517	C	T	0.00289	SHC3	-	FALSE
chr2	99812465	A	G	2.16984E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr9	115447532	T	C	9.24886E-06	INIP	-	TRUE	AluJb	SINE,Alu
chr1	145273345	T	C	0.00133	NBPF20,NOTCH2NL	+	FALSE
chr6	149912307	A	G	0.00026		.	FALSE	AluSc	SINE,Alu
chr1	24798068	C	A	0.00381	NIPAL3	+	FALSE	AluJr	SINE,Alu
chr1	36067817	T	C	0.00339	PSMB2	-	TRUE	AluSz	SINE,Alu
chr4	39552022	T	C	0.00840	UGDH-AS1,SMIM14	+,-	FALSE	AluSx	SINE,Alu
chr1	9331254	A	G	0.00793	H6PD	+	TRUE	AluSx	SINE,Alu
chr2	28002599	T	A	0.00566	MRPL33	+	FALSE
chr1	19543349	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	200521412	G	A	0.00110	KIF14	-	FALSE
chr19	19793729	A	G	0.00124	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr1	220231959	T	C	2.75997E-05	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr2	84670484	T	C	0.00324	SUCLG1	-	TRUE
chr1	44072066	C	T	0.00846	PTPRF	+	FALSE
chr1	26143697	G	C	0.00778	SEPN1	+	FALSE
chr1	145441841	A	T	0.00636	NBPF20,NBPF10,TXNIP	+	FALSE
chr1	10520378	T	C	0.00115		.	FALSE	AluSx1	SINE,Alu
chr1	1662793	T	C	0.00489	SLC35E2	-	TRUE	AluY	SINE,Alu
chr5	149829072	G	T	0.00816	RPS14	-	FALSE
chr2	28002603	C	A	0.00010	MRPL33	+	FALSE
chr1	179044100	A	G	0.00219	FAM20B	+	TRUE	AluSx	SINE,Alu
chr4	2517223	A	G	2.74855E-08	RNF4	+	FALSE
chr3	181430508	G	A	3.55222E-06	SOX2-OT,SOX2	+	FALSE
chr4	170643973	C	T	0.00232	CLCN3	+	FALSE
chr1	32681795	C	T	0.00791	DCDC2B,TMEM234	+,-	FALSE
chr1	27332852	C	T	0.00829	FAM46B	-	FALSE
chr1	33148623	A	G	0.00078	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	179042905	A	G	0.00972	FAM20B	+	TRUE
chr1	6659505	G	A	0.00405	KLHL21	-	FALSE
chr4	103183510	C	T	0.00718	SLC39A8	-	FALSE
chr1	21780000	G	T	0.00153	NBPF3	+	FALSE	ERVL-E-int	SINE,Alu
chr1	36642420	T	C	0.00162	MAP7D1	+	FALSE
chr1	1593060	T	C	5.25946E-05	CDK11B,SLC35E2B	-	FALSE
chr5	125961816	A	G	0.00013	PHAX	+	TRUE	FLAM_C	SINE,Alu
chr5	95236459	C	T	0.00330	ELL2	-	FALSE
chr2	675831	G	T	0.00731	TMEM18	-	FALSE
chr1	113672634	A	G	0.00967		.	FALSE	AluJb	SINE,Alu
chr2	10270757	A	T	0.00382	RRM2	+	FALSE
chr1	87170493	T	G	0.00345	SH3GLB1	+	FALSE
chr1	36752811	C	T	0.00000	THRAP3	+	FALSE
chr1	224517842	C	T	0.00014	NVL	-	FALSE
chr6	116600774	C	G	0.00180	DSE,TSPYL1	+,-	FALSE
chr1	41326886	C	G	0.00085	CITED4	-	FALSE
chr5	125961649	A	G	3.29658E-05	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	148595665	A	G	0.00062	NBPF15	+	TRUE	L1MC4	SINE,Alu
chr1	10518756	T	C	0.00323		.	FALSE	AluSx1	SINE,Alu
chr1	236208773	C	T	0.00722	NID1	-	FALSE
chr19	19793795	A	G	0.00030	ZNF101	+	TRUE	AluSc8	SINE,Alu
chr1	47142539	T	A	0.00066	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	100489992	A	G	0.00938	SLC35A3	+	TRUE	AluSg	SINE,Alu
chr2	99812447	A	G	0.00501	MRPL30	+	TRUE	AluSx	SINE,Alu
chr17	57281058	A	G	0.00061	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	789232	C	T	0.00335	LINC01128	+	FALSE
chr3	176739694	T	C	1.91391E-08	TBL1XR1	-	FALSE
chr17	73702478	G	C	8.31704E-05	SAP30BP	+	FALSE
chr4	89625427	G	C	0.00025	HERC3	+	FALSE
chr1	145511988	A	G	0.00131	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	46159823	T	A	0.00461	TMEM69	+	FALSE
chr7	29960315	C	T	0.00015	SCRN1	-	FALSE
chr2	101587455	C	T	0.00178	NPAS2	+	FALSE
chr1	320211	A	G	6.69717E-05		.	FALSE	AluJo	SINE,Alu
chr2	217123958	T	C	0.00012	MARCH4	-	FALSE
chr1	183094547	T	C	0.00277	LAMC1	+	FALSE
chr2	105964472	C	T	0.00398	C2orf49	+	FALSE	(TTTCTCC)n	SINE,Alu
chr1	100489619	A	G	0.00319	SLC35A3	+	TRUE
chr1	6282237	T	C	0.00455	ICMT	-	TRUE	AluSz	SINE,Alu
chr15	93198678	T	C	0.00064	FAM174B	-	FALSE	(GCCGCT)n	SINE,Alu
chr1	151668295	A	C	0.00576	SNX27	+	FALSE
chr1	40538317	C	A	0.00178	CAP1	+	FALSE
chrX	2824343	T	C	0.00108	ARSD	-	TRUE	AluJb	SINE,Alu
chr14	105270478	G	T	0.00252	ZBTB42	+	FALSE
chr5	40828060	T	C	0.00253	LOC100506548	-	FALSE
chr3	57913810	G	A	0.00477	SLMAP	+	FALSE
chr1	161932324	A	G	0.00356	ATF6	+	FALSE
chr5	14397238	T	C	0.00552	TRIO	+	FALSE
chr12	7052982	T	G	0.00199	C12orf57	+	FALSE	U7	SINE,Alu
chr1	3697137	G	T	0.00250	LRRC47	-	FALSE
chr3	99463810	G	T	0.00599	MIR548G,COL8A1	+,-	FALSE
chr1	186390303	A	C	0.00455	C1orf27	+	FALSE	L1ME3F	SINE,Alu
chr2	39009427	A	G	0.00673		.	FALSE	AluSx3	SINE,Alu
chr1	151742798	T	C	0.00626	OAZ3	+	FALSE
chr14	70838369	T	C	0.00015	SYNJ2BP-COX16,SYNJ2BP	-	TRUE	AluSg	SINE,Alu
chr1	27182751	C	A	0.00122		.	FALSE
chr1	179829425	T	C	1.55944E-05	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr12	12618715	T	C	0.00714	BORCS5	+	FALSE
chr14	88933002	C	G	0.00459	PTPN21	-	FALSE
chrX	153760176	A	G	0.00209	G6PD	-	FALSE
chr5	172461896	T	A	0.00335	ATP6V0E1	+	FALSE
chr1	8045340	C	A	0.00242	PARK7	+	FALSE
chr1	179312752	C	T	0.00106	SOAT1	+	FALSE
chr1	6282324	T	C	0.00142	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	169293721	G	A	0.00978	NME7	-	FALSE
chr1	9163334	T	C	0.00074		.	FALSE	AluSp	SINE,Alu
chr2	98409998	G	T	0.00261	TMEM131	-	FALSE
chr1	114940216	T	G	0.00674	TRIM33	-	FALSE	(T)n	SINE,Alu
chr1	184761312	T	C	0.00308	FAM129A	-	TRUE	AluJo	SINE,Alu
chr3	195963395	A	G	0.00028		.	FALSE
chr1	153585584	G	A	0.00011	S100A16	-	FALSE
chr16	10625460	T	C	0.00015	EMP2	-	TRUE	AluSx	SINE,Alu
chr2	206981796	T	C	0.00137		.	FALSE	AluJb	SINE,Alu
chr6	42856937	A	G	0.00122	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr2	203426264	C	T	0.00948	BMPR2	+	FALSE
chr17	42880190	T	C	0.00284	GJC1	-	TRUE	AluJb	SINE,Alu
chr1	9324670	A	G	0.00734	H6PD	+	FALSE
chr2	172413267	G	C	0.00938	CYBRD1	+	FALSE
chr6	97592900	C	A	0.00076	MMS22L	-	FALSE
chr7	100804430	C	T	0.00629	AP1S1	+	FALSE
chr1	55207982	C	A	0.00063	MROH7-TTC4,TTC4	+	FALSE
chr1	32661594	C	T	0.00528	TXLNA	+	FALSE	(T)n	SINE,Alu
chr1	1252443	T	C	0.00392	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr2	208620143	A	G	0.00605	CCNYL1	+	TRUE	EutTc1-N1	SINE,Alu
chr1	45975345	A	G	0.00127	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	38326704	T	C	0.00328	INPP5B	-	TRUE	AluJr	SINE,Alu
chr2	85776765	T	C	0.00426	GGCX	-	TRUE	AluSz6	SINE,Alu
chr3	156258319	T	C	0.00909	SSR3	-	TRUE	AluYk3	SINE,Alu
chr1	241796948	T	C	0.00082	OPN3,CHML	-	FALSE
chr1	949608	G	A	0.00416	ISG15	+	FALSE
chr1	12058878	T	C	0.00110	MFN2	+	FALSE
chr12	125511952	A	G	0.00138	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	120163247	T	C	0.00680	ZNF697	-	FALSE
chr8	12286546	A	G	0.00400	FAM86B2	-	FALSE
chr5	68858545	C	G	0.00034	GTF2H2C,GTF2H2C_2	+	FALSE	AluSz	SINE,Alu
chr20	29631604	G	A	0.00045	FRG1BP	+	FALSE
chr1	154554945	A	G	0.00877	ADAR	-	FALSE
chr1	16133987	T	C	0.00830	UQCRHL	-	FALSE
chr3	15114398	T	C	0.00758	RBSN	-	TRUE	AluY	SINE,Alu
chr5	174956492	A	C	0.00397	SFXN1	+	FALSE
chr10	75009720	T	C	0.00016	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr2	152132130	A	G	0.00071	NMI	-	FALSE
chr1	62627191	A	G	0.00146	PATJ	+	TRUE	AluSx	SINE,Alu
chr2	113962806	A	G	0.00309		.	FALSE	AluSz	SINE,Alu
chr19	39982631	A	G	0.00316	TIMM50	+	TRUE	AluJr	SINE,Alu
chr3	15113847	T	C	0.00026	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	156565045	C	A	0.00995	GPATCH4	-	FALSE
chr6	32800221	C	T	0.00900		.	FALSE	(GCATCA)n	SINE,Alu
chr1	881627	G	A	2.43828E-05	NOC2L	-	FALSE
chr1	9643106	A	G	0.00088		.	FALSE	AluSx	SINE,Alu
chr17	67539228	G	C	0.00200		.	FALSE
chr3	14986461	T	C	3.09385E-06	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	33148362	A	T	0.00870	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr4	165999188	T	C	0.00751	TMEM192	-	TRUE	FLAM_C	SINE,Alu
chr1	100657416	C	T	0.00102	DBT	-	FALSE	AluJb	SINE,Alu
chr1	45116985	C	T	0.00318	RNF220	+	FALSE
chr1	38158705	G	A	0.00168	CDCA8	+	FALSE
chr9	108152702	G	A	2.83018E-05	SLC44A1	+	FALSE
chr2	25044957	G	A	0.00651	CENPO,ADCY3	+,-	FALSE
chr2	99812398	A	G	0.00019	MRPL30	+	TRUE	AluSx	SINE,Alu
chr22	22050366	T	C	0.00449	PPIL2	+	FALSE	MER5A	SINE,Alu
chr3	38296817	G	A	3.46922E-11	OXSR1	+	FALSE
chr4	3219613	A	C	0.00361	HTT	+	FALSE
chr1	145293428	G	C	0.00855	NBPF20,NBPF10	+	FALSE
chr1	40537944	C	A	0.00506	CAP1	+	FALSE
chr12	125514124	A	G	3.15634E-06		.	FALSE	(TA)n	SINE,Alu
chr2	38971639	A	T	0.00019	SRSF7	-	FALSE
chr3	43098969	T	G	0.00596	FAM198A	+	FALSE	L1ME3G	SINE,Alu
chr6	43582750	A	G	0.00844	POLH	+	TRUE	AluSx1	SINE,Alu
chr1	89447720	G	A	0.00029	KYAT3,RBMXL1	-	FALSE
chr2	158169499	A	G	0.00119	GALNT5	+	FALSE
chr2	86252038	T	C	0.00931	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr2	9629953	C	A	0.00105	ADAM17	-	FALSE
chr1	40219065	C	T	0.00232	PPIE	+	FALSE
chr1	1595586	T	C	0.00206	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	6932082	T	A	0.00330	CAMTA1	+	FALSE
chr3	24163645	C	G	1.00972E-05	THRB	-	FALSE
chr1	65898269	C	T	0.00399	LEPR,LEPROT	+	FALSE	MIRc	SINE,Alu
chr18	6986259	G	A	5.32960E-05	LAMA1	-	FALSE
chr1	10520331	C	T	0.00060		.	FALSE	AluSx1	SINE,Alu
chr1	20826781	C	T	0.00296	MUL1	-	FALSE
chr8	117858602	A	G	0.00133	RAD21	-	FALSE
chr7	17384887	A	G	4.32861E-08	AHR	+	TRUE	AluSc	SINE,Alu
chr1	19542458	T	C	0.00113	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr5	75469427	G	A	0.00155	SV2C	+	FALSE
chr1	144607285	A	C	0.00208	NBPF20	+	FALSE
chr2	217366534	A	G	0.00733		.	FALSE	AluSz	SINE,Alu
chr1	19586455	A	G	0.00245	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	10520154	T	C	0.00124		.	FALSE	AluSx	SINE,Alu
chr1	113247898	G	A	0.00077	RHOC	-	FALSE
chr1	16258610	C	G	0.00142	SPEN	+	FALSE
chr17	79674375	C	T	0.00129	MRPL12	+	FALSE
chr2	110842200	C	A	0.00131	MALL	-	FALSE
chr1	53679878	T	C	0.00348	C1orf123	-	FALSE
chr2	176042866	A	T	0.00596	ATP5G3	-	FALSE
chr1	120166681	G	A	0.00241	ZNF697	-	FALSE
chr6	74133968	T	C	0.00431		.	FALSE	AluY	SINE,Alu
chr1	161932324	A	G	0.00104	ATF6	+	FALSE
chr5	172396725	T	A	0.00014	RPL26L1	+	FALSE
chr1	182356399	A	G	0.00740	GLUL	-	FALSE
chr15	63988357	C	G	0.00539	HERC1	-	FALSE
chr2	32447868	A	G	0.00663	SLC30A6	+	FALSE
chr8	42043493	G	A	0.00045	PLAT	-	FALSE	MLT2C1	SINE,Alu
chr1	231557138	C	G	0.00394	EGLN1	-	FALSE
chr1	9330479	C	T	0.00352	H6PD	+	FALSE
chr1	10044366	A	G	0.00531	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr12	51324122	A	G	0.00226	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr5	118175329	T	C	2.47285E-05	DTWD2	-	TRUE	AluJr	SINE,Alu
chr12	98942824	A	G	2.17067E-06	TMPO	+	TRUE	AluSc	SINE,Alu
chr8	128944719	A	T	0.00093	PVT1	+	FALSE
chr2	5837878	G	A	7.66453E-07	SOX11	+	FALSE
chr1	9663444	C	T	0.00140	TMEM201	+	FALSE
chr1	16892256	T	C	0.00370	NBPF1	-	FALSE
chr15	44751338	G	A	0.00374	CTDSPL2	+	FALSE
chr20	25428588	A	G	0.00068	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	32661615	A	T	0.00225	TXLNA	+	FALSE
chr1	25812110	T	C	0.00639	TMEM57	+	FALSE
chr19	58356478	A	G	0.00030	ZNF587B	+	TRUE	AluSx	SINE,Alu
chr12	98942696	A	G	3.06836E-07	TMPO	+	TRUE	AluSc	SINE,Alu
chr4	17804740	T	C	0.00015	DCAF16	-	TRUE	AluSx	SINE,Alu
chr1	25894466	A	C	0.00783	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr2	8823954	G	A	7.64310E-06	ID2	+	FALSE
chr7	20178490	T	C	0.00028	MACC1,LOC101927668	-	TRUE	AluY	SINE,Alu
chr16	81064440	A	G	0.00409	CENPN	+	TRUE	AluSg	SINE,Alu
chr3	57126614	C	T	0.00358	IL17RD	-	FALSE	AluY	SINE,Alu
chr1	28825337	A	G	0.00904	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	85484276	C	T	0.00168	MCOLN3	-	FALSE
chr10	72187740	C	A	0.00668	EIF4EBP2	+	FALSE
chr3	195964298	A	G	0.00263		.	FALSE
chr1	10042987	A	G	0.00488	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr19	46052975	T	C	0.00652	OPA3	-	TRUE	AluSz6	SINE,Alu
chr8	143744556	T	C	0.00586	JRK	-	TRUE	AluJr	SINE,Alu
chr6	111588769	A	G	2.24603E-05	MFSD4B	+	TRUE	AluYm1	SINE,Alu
chr1	1246978	A	T	0.00760	PUSL1,CPSF3L	+,-	FALSE
chr1	28825337	A	G	0.00191	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr9	131457814	G	A	0.00021	SET	+	FALSE
chr6	3021465	T	C	0.00029	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr3	149686507	T	C	0.00193	PFN2	-	FALSE
chr1	120539742	G	A	0.00469	NOTCH2	-	FALSE
chr1	38280618	G	T	0.00020	MTF1	-	FALSE	(T)n	SINE,Alu
chr1	149819554	T	C	0.00137		.	FALSE	MLT1C2	SINE,Alu
chr5	72801321	T	A	0.00212	BTF3	+	FALSE
chr2	132481470	C	T	0.00594	C2orf27A	+	FALSE
chr7	152343700	T	C	0.00061	XRCC2	-	TRUE	AluSx3	SINE,Alu
chr5	94050487	T	A	0.00380	MCTP1	-	FALSE
chr3	98518157	A	T	8.60022E-05	DCBLD2	-	FALSE
chr2	206987223	T	C	0.00532		.	FALSE	AluSx	SINE,Alu
chr1	1595500	T	C	0.00482	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	26143728	C	T	0.00800	SEPN1	+	FALSE	AluSx	SINE,Alu
chr10	124913908	C	A	0.00784	BUB3	+	FALSE
chr4	103809324	A	C	0.00658	CISD2,SLC9B1	+,-	FALSE
chr1	142804471	C	G	0.00555		.	FALSE	MIRb	SINE,Alu
chr3	156258273	T	C	0.00927	SSR3	-	TRUE	AluYk3	SINE,Alu
chr5	125962169	A	G	0.00013	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	10521254	T	C	0.00640	DFFA	-	TRUE	AluY	SINE,Alu
chr3	155660773	A	G	0.00592		.	FALSE	AluSz	SINE,Alu
chr1	19542305	T	C	0.00085	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr14	53242425	T	C	0.00473	GNPNAT1	-	TRUE	AluJo	SINE,Alu
chr1	53289892	A	G	0.00505	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	145369556	A	G	0.00373	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr15	90820082	A	G	0.00297		.	FALSE	AluY	SINE,Alu
chr8	11666384	C	T	0.00029	FDFT1	+	FALSE
chr1	117644949	C	G	0.00862	TTF2	+	FALSE
chr1	11785182	A	G	0.00262		.	FALSE	AluJr	SINE,Alu
chr7	152342999	T	C	0.00313		.	FALSE	FRAM	SINE,Alu
chr3	195415462	G	A	0.00140	LINC00969,SDHAP2	+	FALSE
chr2	201774600	T	C	1.56082E-05		.	FALSE	AluJr4	SINE,Alu
chr1	11298093	C	T	1.54321E-14	MTOR	-	FALSE
chr15	85190470	G	T	8.70862E-05	WDR73	-	FALSE
chr2	74332837	G	T	4.72839E-05	TET3	+	FALSE
chr12	56510697	G	A	0.00055	RPL41	+	FALSE
chr1	59120961	G	A	0.00383	MYSM1	-	FALSE
chr2	113287424	T	A	0.00361	TTL	+	FALSE
chr1	54691922	T	A	0.00415	SSBP3	-	FALSE
chr14	63841402	A	C	0.00692	PPP2R5E	-	FALSE
chr1	36067752	T	C	1.27861E-08	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	156905300	A	C	0.00870	ADAM19	-	FALSE	MER92B	SINE,Alu
chr2	50147866	G	A	0.00130	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr1	86049302	A	G	0.00114	CYR61	+	FALSE
chr1	9328102	A	G	7.16435E-05	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	10518733	T	C	0.00050		.	FALSE	AluSx1	SINE,Alu
chr6	57034841	G	T	0.00581	ZNF451,LOC101927211	+,-	FALSE
chr3	195243024	C	A	0.00729	PPP1R2	-	FALSE
chr1	1594197	C	T	0.00097	CDK11B,SLC35E2B	-	FALSE
chr1	35648714	A	T	0.00841	SFPQ	-	FALSE
chr12	49745500	A	G	0.00265	DNAJC22	+	TRUE	AluSx3	SINE,Alu
chr1	9910357	A	T	0.00056	CTNNBIP1	-	FALSE
chr4	39551008	T	C	0.00017	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr3	57542173	C	T	0.00020	PDE12	+	FALSE
chr5	176026131	A	T	0.00979	GPRIN1	-	FALSE
chr1	15896984	A	G	0.00297	DNAJC16	+	FALSE	FLAM_C	SINE,Alu

RBP	DDX27
Knock-Method	shRNA
RBP Family	DEAD
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR584LDM
Platform	HiSeq
Pubmed ID	32252787

DDX27 - Target Gene Network