RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	10193358	A	G	1.11864E-10	VHL	+	TRUE	L1ME4a	SINE,Alu
chr3	170609385	C	T	0.00212	EIF5A2	-	FALSE
chr3	72426071	T	A	0.00169	RYBP	-	FALSE	(T)n	SINE,Alu
chr10	51612914	T	C	0.00063	TIMM23B,TIMM23	+,-	FALSE
chr17	40466890	G	T	0.00260	STAT3	-	FALSE	AluSc8	SINE,Alu
chr4	2940485	T	C	2.93326E-08	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr19	8005999	T	C	0.00027	TIMM44	-	FALSE
chr1	28566320	T	C	0.00309		.	FALSE	AluSx1	SINE,Alu
chr1	1594977	T	C	0.00314	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr1	19234174	A	G	0.00046	IFFO2	-	FALSE
chr3	53319203	C	G	0.00453	DCP1A	-	FALSE
chr6	34254585	G	T	0.00519		.	FALSE	AluSq2	SINE,Alu
chr1	67874696	T	C	9.42249E-06	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr12	53936878	G	T	0.00036	ATF7	-	FALSE
chr8	30536016	T	C	2.97001E-06	GSR	-	TRUE	AluJr	SINE,Alu
chr1	32687473	T	G	0.00892	TMEM234,EIF3I	+,-	FALSE
chr2	37328008	T	C	1.98312E-07		.	FALSE
chr1	9642830	T	A	0.00059	SLC25A33	+	FALSE
chr1	109475629	A	G	0.00744	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr3	150262002	G	T	0.00016	SERP1	-	FALSE
chr1	3546128	A	G	0.00213	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr2	37331119	T	C	0.00758		.	FALSE	AluSx1	SINE,Alu
chr1	27205224	T	C	0.00353		.	FALSE	AluSc	SINE,Alu
chr6	160101733	T	C	0.00784	SOD2	-	TRUE	AluSz	SINE,Alu
chr2	128601556	T	C	3.22117E-06		.	FALSE	AluJr	SINE,Alu
chr1	6282420	T	C	0.00779	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	160967855	T	C	0.00042	F11R	-	TRUE	AluSp	SINE,Alu
chr10	60047608	A	G	0.00356	CISD1	+	FALSE	(A)n	SINE,Alu
chr5	118174668	T	C	1.32199E-05	DTWD2	-	TRUE	AluY	SINE,Alu
chr16	74734743	G	C	0.00436	MLKL	-	FALSE
chr9	68413593	C	A	0.00342		.	FALSE
chr1	23240255	G	A	0.00873	EPHB2	+	FALSE
chr22	41252612	G	A	0.00561	ST13	-	FALSE
chr1	148556087	G	C	0.00486		.	FALSE
chr1	156107534	C	T	0.00168	LMNA	+	FALSE
chr2	206983138	T	C	0.00669		.	FALSE	AluJb	SINE,Alu
chr1	184661933	G	A	0.00138	EDEM3	-	FALSE
chr3	196079305	T	C	0.00161		.	FALSE	AluSx	SINE,Alu
chr2	76672504	A	G	0.00010		.	FALSE	7SK	SINE,Alu
chr1	1595540	T	C	0.00042	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr7	116147752	A	G	0.00031	CAV2	+	FALSE	(AAAAGAAA)n	SINE,Alu
chr5	37291446	T	C	6.87884E-05		.	FALSE	AluSx3	SINE,Alu
chr1	121134169	A	T	0.00660	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	(TTTCCT)n	SINE,Alu
chr16	2821028	G	T	9.74054E-05	SRRM2	+	FALSE
chr7	6202695	A	C	0.00013	CYTH3	-	FALSE
chr14	69704553	G	T	7.62587E-05	EXD2	+	FALSE
chr2	152132130	A	G	6.12116E-05	NMI	-	FALSE
chr5	37291617	T	C	0.00022		.	FALSE	AluSx3	SINE,Alu
chr1	10044137	A	G	2.83529E-05	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr1	16200163	A	G	0.00078	SPEN	+	FALSE
chr1	120267061	C	A	0.00181	PHGDH	+	FALSE
chr3	86991598	G	T	0.00179	VGLL3	-	FALSE
chr3	181430508	G	A	3.55222E-06	SOX2-OT,SOX2	+	FALSE
chr3	101369192	C	T	0.00014	ZBTB11	-	FALSE
chr9	102744698	G	T	0.00301	ERP44	-	FALSE
chr1	36068325	T	C	0.00638	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	24022914	A	G	0.00347	RPL11	+	FALSE
chr1	17393889	A	G	0.00390	PADI2	-	FALSE
chr3	10192798	A	G	0.00722	VHL	+	TRUE	AluSx1	SINE,Alu
chr14	50361171	C	T	0.00017	ARF6	+	FALSE	(T)n	SINE,Alu
chr1	154554950	G	T	0.00599	ADAR	-	FALSE
chr1	21810903	A	G	0.00498	NBPF3	+	FALSE	L1MC4	SINE,Alu
chr5	125961647	A	G	1.53189E-07	PHAX	+	FALSE	AluSz6	SINE,Alu
chr2	65432447	C	T	0.00486		.	FALSE
chr1	11710798	T	G	0.00328	FBXO2	-	FALSE	(CCT)n	SINE,Alu
chrX	54587218	A	G	0.00014	GNL3L	+	TRUE	AluSq2	SINE,Alu
chr1	65720330	A	C	0.00211		.	FALSE
chr3	44791569	T	C	0.00685	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	27733305	A	C	0.00374	WASF2	-	FALSE
chr2	110373919	G	A	0.00240	SOWAHC	+	FALSE
chrX	77083548	T	C	0.00205	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr5	6491892	G	A	0.00707	UBE2QL1	+	FALSE
chr1	10521254	T	C	0.00856	DFFA	-	TRUE	AluY	SINE,Alu
chr5	175816760	T	A	0.00016		.	FALSE
chr1	33148282	A	G	0.00825	SYNC,RBBP4	+,-	FALSE	AluSg	SINE,Alu
chr5	174956487	T	C	0.00457	SFXN1	+	FALSE
chr4	155457052	T	A	0.00833	PLRG1	-	FALSE	L2d2	SINE,Alu
chr1	19954014	G	T	0.00055	MINOS1,MINOS1-NBL1	+	FALSE	L2c	SINE,Alu
chr1	16892918	T	C	0.00158	NBPF1	-	FALSE
chr17	57281058	A	G	0.00061	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	87811103	T	G	0.00028	LMO4	+	FALSE
chr1	204520409	A	G	0.00504	MDM4	+	TRUE	AluJb	SINE,Alu
chr7	100279138	A	T	0.00741	GIGYF1	-	FALSE	A-rich	SINE,Alu
chr1	236744712	C	A	0.00054	HEATR1	-	FALSE
chr1	67518534	C	T	0.00030	SLC35D1	-	FALSE
chr1	1570928	G	T	0.00173	CDK11B	-	FALSE
chr5	81571876	A	T	0.00013	RPS23	-	FALSE
chr1	154554945	A	G	0.00877	ADAR	-	FALSE
chr3	48787118	T	C	0.00359	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	145293498	G	C	0.00154	NBPF20,NBPF10	+	FALSE
chr1	10517538	T	C	0.00840		.	FALSE	AluSx1	SINE,Alu
chr12	124069108	G	A	0.00635	TMED2	+	FALSE	(GCG)n	SINE,Alu
chr1	234744480	G	A	0.00409	IRF2BP2	-	FALSE
chr1	78142856	T	C	0.00086	ZZZ3	-	TRUE	AluSx	SINE,Alu
chr8	11700737	T	C	0.00126	CTSB	-	TRUE	AluSg	SINE,Alu
chr3	45721891	A	G	0.00163	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr3	10290515	G	A	0.00904	TATDN2	+	FALSE
chr1	27879800	T	G	0.00473	AHDC1	-	FALSE	MIRb	SINE,Alu
chr1	1655474	G	A	0.00694	CDK11B,CDK11A	-	FALSE
chr7	130629624	T	C	0.00435	LINC-PINT	-	TRUE
chr1	183105534	T	C	0.00125	LAMC1	+	FALSE
chr1	205687213	T	A	0.00950	NUCKS1	-	FALSE
chr7	65888510	T	C	0.00519		.	FALSE
chr3	12882839	C	G	0.00118	RPL32	-	FALSE
chr3	48787909	T	C	6.24209E-06	PRKAR2A	-	TRUE	AluJr	SINE,Alu
chr8	144684445	G	A	0.00062		.	FALSE
chr1	92862826	A	G	0.00100		.	FALSE	AluJr	SINE,Alu
chr2	206988075	G	A	0.00672	NDUFS1	-	FALSE
chr2	37331745	T	C	0.00097		.	FALSE	AluJb	SINE,Alu
chr4	17804879	T	C	0.00863	DCAF16	-	TRUE	AluSx	SINE,Alu
chr7	66007124	T	C	0.00158	GS1-124K5.11	-	TRUE	AluJo	SINE,Alu
chr1	10517352	T	C	0.00064		.	FALSE	AluJr	SINE,Alu
chr5	145666109	A	T	0.00728	RBM27	+	FALSE
chr1	40214333	A	G	0.00112	PPIE	+	TRUE	AluSq2	SINE,Alu
chr5	41917697	A	T	0.00051	C5orf51	+	FALSE
chr1	27879797	C	A	0.00246	AHDC1	-	FALSE	MIRb	SINE,Alu
chr2	37075013	T	A	0.00119	STRN	-	FALSE
chr1	179042482	A	G	0.00079	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr1	19542456	T	C	0.00323	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr15	102512797	A	G	0.00080	WASH3P	+	FALSE
chr15	90375419	T	C	0.00521	C15orf38-AP3S2,AP3S2	-	TRUE	AluJr	SINE,Alu
chr1	120612163	C	A	0.00566	NOTCH2	-	FALSE
chr1	15755248	C	T	0.00405	EFHD2	+	FALSE
chr9	132575828	A	T	0.00445	TOR1A	-	FALSE
chr13	47325380	G	A	0.00270	LRCH1	+	FALSE
chr19	9673274	T	C	0.00018		.	FALSE	Tigger1	SINE,Alu
chr1	181026558	G	A	0.00217	MR1	+	FALSE
chr1	144615138	T	G	0.00196	NBPF20,NBPF9	+	FALSE
chr1	1677253	T	C	0.00145	SLC35E2	-	FALSE
chr1	118472382	G	T	0.00029	WDR3	+	FALSE
chr2	217366866	A	G	0.00247		.	FALSE	AluSz6	SINE,Alu
chr3	63996230	A	T	0.00309	PSMD6-AS2,PSMD6	+,-	FALSE
chr2	38971059	A	C	0.00539	SRSF7	-	FALSE
chr1	183094547	T	C	0.00277	LAMC1	+	FALSE
chr1	155853219	A	G	0.00520	SYT11	+	TRUE	AluJb	SINE,Alu
chr4	25749196	T	A	0.00870	SEL1L3	-	FALSE
chr1	6282315	T	C	5.02629E-05	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	99516962	C	A	2.05391E-14	MIR548G	-	FALSE
chr2	176042865	G	T	0.00887	ATP5G3	-	FALSE
chr1	28661692	A	G	0.00219	MED18	+	TRUE	AluSg	SINE,Alu
chr1	247319704	T	A	0.00053	ZNF124	-	FALSE
chr10	100177984	C	T	6.55965E-05	HPS1	-	FALSE
chr3	185009713	G	T	0.00106	MAP3K13	+	FALSE
chr7	86816663	A	G	0.00103	DMTF1	+	TRUE	AluJr	SINE,Alu
chr3	14986452	T	C	0.00815	FGD5-AS1	-	TRUE	AluSq2	SINE,Alu
chr1	157963369	C	G	0.00667	KIRREL	+	FALSE
chr1	12071680	A	G	0.00127	MFN2	+	FALSE
chr8	30536554	T	C	0.00023	GSR	-	TRUE	AluSp	SINE,Alu
chr1	77759578	A	G	0.00404	AK5	+	FALSE
chr7	300513	T	C	2.92808E-06	FAM20C	+	FALSE
chr15	51294995	G	A	0.00268	AP4E1	+	FALSE
chr1	193054485	T	C	0.00439	TROVE2	+	FALSE
chr3	99515750	A	G	0.00216	MIR548G	-	FALSE
chr1	179042482	A	G	1.77761E-07	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr3	15115270	G	T	0.00177	RBSN	-	FALSE
chr1	24798068	C	A	0.00381	NIPAL3	+	FALSE	AluJr	SINE,Alu
chr17	45761109	T	G	0.00018		.	FALSE
chr15	90820095	A	G	6.27827E-07		.	FALSE	AluY	SINE,Alu
chr1	28261662	A	G	0.00872	SMPDL3B	+	FALSE
chr1	9328242	A	G	0.00116	H6PD	+	TRUE	AluJr	SINE,Alu
chr1	148241546	G	A	0.00416	NBPF8	-	FALSE	U1	SINE,Alu
chr5	35064460	G	C	0.00920	PRLR	-	FALSE
chr1	145689533	A	G	0.00051	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr3	48787011	T	C	0.00040	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr7	44918804	T	C	0.00015	PURB	-	TRUE	AluSg	SINE,Alu
chr4	56291751	A	C	0.00291	TMEM165	+	FALSE
chr1	233086456	T	C	7.28865E-05	NTPCR	+	FALSE
chr1	44685732	T	C	9.79150E-12	DMAP1	+	FALSE
chr1	242012149	C	T	0.00510	EXO1	+	FALSE
chr2	68402154	A	T	0.00991	PNO1	+	FALSE
chr8	95805038	A	G	1.06873E-05	DPY19L4	+	TRUE	AluYf1	SINE,Alu
chr11	111930765	T	C	0.00764	DLAT	+	FALSE
chr3	197611125	A	G	0.00948		.	FALSE	AluSx1	SINE,Alu
chr5	40832555	A	T	5.95918E-06	RPL37	-	FALSE
chr4	177251328	C	T	9.41230E-05	SPCS3	+	FALSE
chr2	1636053	A	G	0.00189	PXDN	-	FALSE
chr1	9644558	A	G	0.00451		.	FALSE	AluSx	SINE,Alu
chr9	140174976	G	T	0.00045	TOR4A	+	FALSE
chr6	74134823	T	C	0.00305		.	FALSE	AluSz	SINE,Alu
chr3	37317605	A	G	9.02711E-05	GOLGA4	+	FALSE
chr1	12677547	G	A	0.00015	DHRS3	-	FALSE	(A)n	SINE,Alu
chr3	40578843	A	G	0.00749	ZNF621	+	TRUE	AluJr	SINE,Alu
chr2	11318235	G	C	0.00911	PQLC3	+	FALSE
chr4	1205668	C	A	0.00132	CTBP1-AS,CTBP1	+,-	FALSE	(A)n	SINE,Alu
chr1	32799438	A	T	0.00485	MARCKSL1	-	FALSE
chr1	570178	G	A	0.00787		.	FALSE
chr17	57281125	A	G	0.00204	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	120539691	G	T	0.00350	NOTCH2	-	FALSE
chr1	10521237	T	C	0.00348	DFFA	-	TRUE	AluY	SINE,Alu
chr1	186281696	T	G	0.00564	PRG4,TPR	+,-	FALSE
chr2	72403405	A	C	0.00227	EXOC6B	-	FALSE	GA-rich	SINE,Alu
chr1	15993603	G	A	0.00103		.	FALSE	AluSx4	SINE,Alu
chr2	68402152	T	C	0.00794	PNO1	+	FALSE
chr2	72968439	T	C	0.00148	EXOC6B	-	FALSE
chr1	10518797	T	C	0.00148		.	FALSE	AluSx1	SINE,Alu
chr4	248713	A	G	0.00367	ZNF876P	+	FALSE
chr2	232319611	A	T	3.84700E-07	NCL	-	FALSE
chr10	17362784	A	G	0.00261	ST8SIA6	-	FALSE
chr3	141879810	T	C	0.00348	GK5	-	FALSE	AluJr	SINE,Alu
chr1	179044216	A	G	0.00277	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	145513094	A	G	0.00633	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	9160900	T	C	0.00893		.	FALSE	AluJb	SINE,Alu
chr17	36104904	A	G	0.00442	HNF1B	-	FALSE	G-rich	SINE,Alu
chr12	77438436	T	C	0.00187	E2F7	-	FALSE
chr1	45242978	A	G	0.00604	RPS8	+	TRUE	AluSz	SINE,Alu
chr11	94863488	C	T	0.00615	ENDOD1	+	FALSE
chr12	124146077	A	G	1.08379E-05	GTF2H3	+	TRUE	AluSx4	SINE,Alu

RBP	CEBPZ
Knock-Method	siRNA
RBP Family	CBF
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR977SOT
Platform	HiSeq
Pubmed ID	32252787

CEBPZ - Target Gene Network