RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr19	24103987	A	G	1.84513E-07	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr2	86252049	T	C	0.00271	POLR1A	-	FALSE	AluSq2	SINE,Alu
chr1	23636275	G	T	0.00185	HNRNPR	-	FALSE
chr2	37327280	A	T	0.00831		.	FALSE	L1MB8	SINE,Alu
chr1	1419768	A	G	0.00189	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	179041705	A	T	0.00068	FAM20B	+	FALSE
chr2	30381505	T	C	0.00820	YPEL5	+	FALSE
chr1	28834586	G	A	0.00044	SNHG3,RCC1	+	FALSE	FRAM	SINE,Alu
chr17	26672363	G	A	0.00599	TNFAIP1	+	FALSE
chr2	69688901	T	C	0.00503	AAK1	-	TRUE	AluSq2	SINE,Alu
chr1	39305002	A	T	0.00089	RRAGC	-	FALSE
chr7	75145495	G	A	5.48132E-07	PMS2P3	-	FALSE
chr1	10041422	A	G	0.00115	NMNAT1	+	TRUE	AluYj4	SINE,Alu
chr1	46159809	T	A	0.00605	TMEM69	+	FALSE
chr1	150548877	C	G	0.00071	MCL1	-	FALSE
chr7	94060363	T	G	2.98576E-06	COL1A2	+	FALSE
chr1	11347152	A	T	0.00401	UBIAD1	+	FALSE
chr2	191366707	A	G	0.00900	MFSD6	+	FALSE
chr1	104097685	C	T	0.00028	RNPC3,AMY2B	+	FALSE
chr1	165877575	A	C	0.00839	UCK2	+	FALSE
chr1	11783776	C	A	0.00039		.	FALSE	AluSq	SINE,Alu
chr1	204525666	A	G	0.00093	MDM4	+	TRUE	AluSz	SINE,Alu
chr7	6063283	C	T	0.00032	AIMP2,EIF2AK1	+,-	FALSE
chr1	205687341	C	T	0.00494	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr4	77996969	T	G	0.00971	CCNI	-	FALSE
chr3	107773064	T	C	0.00421	CD47	-	TRUE	FLAM_A	SINE,Alu
chr1	143189042	C	T	0.00087	LOC102723769	-	FALSE	L1MC4	SINE,Alu
chr1	19953132	C	A	0.00910	MINOS1,MINOS1-NBL1	+	FALSE
chr2	217366444	A	G	2.40359E-05		.	FALSE
chr1	145290874	C	T	0.00380	NBPF20	+	FALSE
chr1	990984	G	A	0.00018	AGRN	+	FALSE
chr1	16929100	C	T	0.00249	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr1	168218522	A	G	9.71811E-05		.	FALSE	AluSz	SINE,Alu
chr2	37328013	T	C	1.05952E-05		.	FALSE
chr5	70503890	A	T	0.00188		.	FALSE
chr2	26617209	A	G	5.06124E-05	EPT1	+	FALSE	AluSz	SINE,Alu
chr1	45975673	A	G	0.00827	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr17	49042386	T	C	4.28426E-05	SPAG9	-	TRUE	AluJb	SINE,Alu
chr2	61413040	T	A	0.00675	AHSA2	+	FALSE	(ATTTTAT)n	SINE,Alu
chr3	101405563	A	G	0.00511	RPL24	-	FALSE
chr1	11084104	G	A	0.00116	TARDBP	+	FALSE
chr1	53291382	A	G	0.00114	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr14	74526976	T	C	1.13179E-06	BBOF1,ALDH6A1	+,-	FALSE	AluJo	SINE,Alu
chr1	118066459	A	G	0.00729	MAN1A2	+	FALSE
chr16	10625101	T	C	0.00804	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	29519736	T	C	0.00610	MECR	-	TRUE	AluJb	SINE,Alu
chr1	28835934	A	G	0.00069	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr19	9672465	T	C	0.00155		.	FALSE	AluJr	SINE,Alu
chr3	57126615	T	C	0.00460	IL17RD	-	FALSE	AluY	SINE,Alu
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr2	179371305	A	G	0.00696	MIR548N	+	FALSE
chr4	165998714	T	C	0.00254	TMEM192	-	TRUE	AluSg	SINE,Alu
chr1	6282301	T	C	0.00290	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	17384440	A	G	0.00271	AHR	+	TRUE	AluSx	SINE,Alu
chr1	145369709	A	G	0.00258	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr1	11710798	T	G	0.00328	FBXO2	-	FALSE	(CCT)n	SINE,Alu
chr14	63841400	A	C	0.00122	PPP2R5E	-	FALSE
chr1	86049392	C	A	0.00322	CYR61	+	FALSE
chr3	5258280	A	G	4.07938E-08	EDEM1	+	FALSE
chr1	45973928	G	A	0.00093	MMACHC	+	FALSE
chr1	101443701	A	G	0.00749	SLC30A7	+	FALSE
chr16	10623558	T	C	0.00103	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	46032974	T	C	0.00141	AKR1A1	+	FALSE
chr3	40503559	C	G	0.00018	RPL14	+	FALSE
chr19	54627915	C	T	0.00015	PRPF31	+	FALSE
chr1	224927968	G	A	0.00695	CNIH3	+	FALSE
chr2	99813020	A	G	0.00015	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	113673737	A	G	0.00798		.	FALSE	AluSx1	SINE,Alu
chr3	183209035	T	C	9.98912E-07	KLHL6	-	TRUE	AluSq	SINE,Alu
chr1	53288862	A	G	0.00799	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	38971040	G	T	0.00651	SRSF7	-	FALSE
chr1	6683581	A	C	0.00189	PHF13	+	FALSE
chr1	45671434	G	C	0.00819	ZSWIM5	-	FALSE
chr1	179044206	A	G	0.00458	FAM20B	+	TRUE	AluSx	SINE,Alu
chr3	186502665	C	T	0.00637	EIF4A2	+	FALSE
chr2	64863970	C	T	9.52027E-09	SERTAD2	-	FALSE
chr3	119212010	A	G	0.00685	POGLUT1	+	FALSE
chr2	37330620	T	C	0.00216		.	FALSE	AluSq2	SINE,Alu
chrX	118672561	T	C	2.49155E-08	CXorf56	-	TRUE	AluSx	SINE,Alu
chr1	10521237	T	C	0.00200	DFFA	-	TRUE	AluY	SINE,Alu
chr7	64435685	A	T	0.00239	ZNF117	-	FALSE
chr3	93780109	G	C	8.09346E-05	DHFR2	-	FALSE
chr1	10517314	T	C	0.00617		.	FALSE	AluJr	SINE,Alu
chr5	32601672	A	T	0.00563	SUB1	+	FALSE
chr1	171486912	G	A	0.00866	PRRC2C	+	FALSE
chr1	154554951	A	G	0.00554	ADAR	-	FALSE
chr1	33086758	T	C	0.00818		.	FALSE	AluY	SINE,Alu
chr1	86817074	G	T	9.65311E-06	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr3	196080531	T	C	0.00952	UBXN7	-	TRUE	AluSx	SINE,Alu
chr3	183889337	A	T	3.46641E-05	DVL3	+	FALSE
chr1	19543456	T	C	0.00386	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chrM	2619	A	T	0.00012	RNR2	+	FALSE	LSU-rRNA_Hsa	SINE,Alu
chr1	1458255	T	G	0.00438	ATAD3A	+	FALSE
chr1	11785234	A	G	0.00339		.	FALSE	AluJr	SINE,Alu
chr1	145688663	T	G	0.00081	NBPF20,NBPF10,RNF115	+	FALSE
chr1	16929100	C	T	0.00911	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr7	128143512	A	G	0.00984		.	FALSE	AluJr4	SINE,Alu
chr1	142688707	A	C	0.00504		.	FALSE
chr3	22424405	T	A	0.00766		.	FALSE
chr2	37430603	T	C	0.00483	CEBPZOS,CEBPZ	+,-	FALSE
chr7	75677504	C	T	0.00768	MDH2	+	FALSE
chr2	97020049	T	C	0.00070	NCAPH	+	FALSE
chr3	50150360	A	G	0.00651	RBM5	+	TRUE	AluSx	SINE,Alu
chr1	36068370	T	C	0.00067	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	46752091	G	A	0.00035	LRRC41	-	FALSE
chr12	54634306	T	C	0.00616	CBX5	-	TRUE	AluJr	SINE,Alu
chr2	5837878	G	A	7.66453E-07	SOX11	+	FALSE
chr1	1647871	T	C	0.00906	CDK11B,CDK11A	-	FALSE
chr1	26188238	G	A	0.00148	PAQR7	-	FALSE	AluSp	SINE,Alu
chr1	3371371	C	G	0.00367	ARHGEF16	+	FALSE
chr8	12879062	T	C	0.00035	KIAA1456	+	FALSE
chr1	210006603	C	T	0.00829	DIEXF	+	FALSE
chr3	20025662	T	G	0.00028	RAB5A,PP2D1	+,-	FALSE
chr1	145375858	T	C	0.00069	NBPF20,NBPF10	+	FALSE
chr16	88763958	G	A	7.55606E-05	RNF166	-	FALSE
chr1	180859304	T	C	2.77658E-06	XPR1	+	FALSE
chr14	69708241	G	A	0.00748	EXD2	+	FALSE
chr17	36104904	A	G	0.00442	HNF1B	-	FALSE	G-rich	SINE,Alu
chr3	49394834	G	A	0.00000	GPX1	-	FALSE
chr1	26608008	T	A	0.00496	SH3BGRL3	+	FALSE
chr1	16933740	T	A	0.00286	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr6	29857578	A	G	0.00280		.	FALSE
chr1	145688983	A	G	0.00101	NBPF20,NBPF10,RNF115	+	TRUE	AluSc8	SINE,Alu
chr3	183900836	G	A	0.00658	AP2M1	+	FALSE
chr7	128143797	A	G	4.50405E-06		.	FALSE	AluSq2	SINE,Alu
chr2	128601426	T	C	0.00034		.	FALSE	AluJr	SINE,Alu
chr19	49619561	T	C	2.39173E-05	LIN7B	+	FALSE
chr2	190617700	T	C	1.38394E-05	OSGEPL1	-	FALSE
chr9	117050998	G	A	0.00326	COL27A1	+	FALSE
chr1	45504720	G	C	0.00759	ZSWIM5	-	FALSE
chr1	156262653	A	C	0.00128	GLMP	-	FALSE
chr3	196079700	T	C	0.00518		.	FALSE	AluSc	SINE,Alu
chr4	57796758	T	A	6.82460E-05	REST	+	FALSE
chr1	160990875	T	C	9.42851E-06	F11R	-	FALSE
chr3	14986080	T	C	4.44089E-16	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	16890607	G	A	0.00869	NBPF1	-	FALSE
chr7	128293103	A	C	0.00313	LINC01000	+	FALSE
chr16	19715588	T	C	0.00063		.	FALSE	AluSg	SINE,Alu
chr1	1653046	T	A	0.00986	CDK11B,CDK11A	-	FALSE
chr2	103333653	T	C	0.00426	MFSD9	-	FALSE	AluYm1	SINE,Alu
chr3	52448770	A	G	0.00498	PHF7	+	TRUE	AluJb	SINE,Alu
chr1	109180686	C	T	1.31584E-05	FAM102B	+	FALSE
chr2	86252038	T	C	0.00931	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	9910358	T	C	0.00083	CTNNBIP1	-	FALSE
chr1	19542433	T	C	0.00076	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr7	65992665	T	C	2.17687E-05		.	FALSE	AluJr	SINE,Alu
chr1	100550370	T	A	0.00731	SASS6	-	FALSE
chr19	53571306	T	C	0.00481	ZNF160	-	FALSE
chr1	10521238	T	C	0.00232	DFFA	-	TRUE	AluY	SINE,Alu
chr16	81064656	A	G	0.00120	CENPN	+	TRUE	AluSg	SINE,Alu
chr9	80333361	C	T	0.00382	GNAQ	-	FALSE
chr1	144881463	C	T	0.00147	NBPF20,PDE4DIP	+,-	FALSE
chr7	17384393	A	G	1.74996E-06	AHR	+	TRUE	AluSx	SINE,Alu
chr6	44222158	T	A	0.00781	SLC35B2	-	FALSE
chr8	27592828	G	A	0.00133	CCDC25	-	FALSE
chr1	2160436	C	T	0.00488	SKI	+	FALSE	(CGC)n	SINE,Alu
chr1	19542310	T	C	2.12437E-06	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	206983255	T	C	0.00246		.	FALSE	AluJb	SINE,Alu
chr2	128620435	C	A	0.00602	AMMECR1L	-	FALSE
chr12	133635613	T	C	0.00024		.	FALSE
chr1	46075709	A	G	0.00431	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	9910357	A	T	0.00056	CTNNBIP1	-	FALSE
chr1	203771852	G	T	0.00883	ZC3H11A	+	FALSE	(T)n	SINE,Alu
chr12	124146095	A	G	0.00431	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr2	37328075	T	C	0.00335		.	FALSE
chr1	145513113	A	G	0.00505	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	6282400	T	C	0.00118	ICMT	-	TRUE	AluSz	SINE,Alu
chr1	156613517	C	A	0.00011	BCAN	+	FALSE
chr5	112312528	T	C	0.00827	DCP2	+	FALSE
chr1	36068276	T	C	0.00339	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	117530213	G	T	0.00256	PTGFRN	+	FALSE
chr1	26608015	T	A	3.80922E-07		.	FALSE
chr16	75479250	T	C	0.00568	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr7	137561077	C	A	0.00995	CREB3L2	-	FALSE
chr1	46159809	T	A	0.00761	TMEM69	+	FALSE
chr4	10443061	G	T	0.00057	ZNF518B	-	FALSE
chr2	61416411	T	G	0.00146	USP34	-	FALSE	AluSc8	SINE,Alu
chr17	79529443	T	C	0.00153	NPLOC4	-	TRUE	AluSx1	SINE,Alu
chr3	47628810	T	A	0.00934	SMARCC1	-	FALSE
chr1	26143725	A	T	0.00112	SEPN1	+	FALSE	AluSx	SINE,Alu
chr5	96368471	G	T	3.92809E-06		.	FALSE
chr4	128756632	A	G	0.00072		.	FALSE	AluSx	SINE,Alu
chr3	105258861	A	G	0.00030	ALCAM	+	FALSE
chr1	53288894	A	G	8.27269E-06	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	11119935	G	T	2.46542E-05	SRM	-	FALSE
chr1	46075171	A	C	0.00140	NASP	+	FALSE	A-rich	SINE,Alu
chr1	1647814	T	C	8.49337E-05	CDK11B,CDK11A	-	FALSE
chr2	11318235	G	C	0.00911	PQLC3	+	FALSE
chr14	50361170	C	T	0.00096	ARF6	+	FALSE	(T)n	SINE,Alu
chr19	11256702	T	C	6.98885E-06	SPC24	-	TRUE	AluJr4	SINE,Alu
chr3	9848198	G	T	0.00295	ARPC4,ARPC4-TTLL3	+	FALSE	(T)n	SINE,Alu
chr20	36147563	T	C	0.00313	BLCAP	-	TRUE
chr12	69160574	A	G	0.00891		.	FALSE	AluJb	SINE,Alu
chr1	101442569	C	A	0.00567	SLC30A7	+	FALSE
chr7	44918732	T	C	0.00039	PURB	-	FALSE	AluSg	SINE,Alu
chr2	61386572	C	G	0.00821	C2orf74	+	FALSE	AluSz	SINE,Alu
chr5	178508569	C	T	0.00571	ZNF354C	+	FALSE
chr1	25893927	A	G	0.00081	LDLRAP1	+	FALSE
chr14	23441535	A	T	0.00879	AJUBA	-	FALSE	GA-rich	SINE,Alu
chr1	160112340	A	G	0.00374	ATP1A2	+	TRUE	AluSx3	SINE,Alu
chr5	134062608	G	T	0.00171	SEC24A	+	FALSE
chr3	15112630	C	T	0.00017	RBSN	-	FALSE	AluSq2	SINE,Alu
chr1	213069114	C	A	0.00681	FLVCR1	+	FALSE
chr2	17942775	T	A	0.00367	GEN1	+	FALSE
chr19	42375586	A	G	0.00404		.	FALSE	AluSx	SINE,Alu
chr1	67874697	T	C	0.00010	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	54231850	T	A	0.00681	NDC1	-	FALSE
chr1	204526611	A	G	0.00402	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	145368837	C	A	4.93702E-07	NBPF20,NBPF10	+	FALSE
chr19	9672312	T	C	4.30163E-05		.	FALSE	AluJr	SINE,Alu
chr1	19542250	T	C	9.94571E-09	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	101443431	C	T	0.00013	SLC30A7	+	FALSE	AluSq2	SINE,Alu
chr5	31553951	C	T	0.00240	C5orf22	+	FALSE
chr1	241796950	C	A	1.24743E-05	OPN3,CHML	-	FALSE
chr1	33148691	A	G	2.12433E-06	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr4	109542624	G	A	0.00048	RPL34	+	FALSE	MIRb	SINE,Alu
chr1	26161104	C	A	0.00030	AUNIP	-	FALSE	AluSc8	SINE,Alu
chr1	22109952	G	A	0.00889		.	FALSE
chr7	2768626	C	T	0.00228	AMZ1,GNA12	+,-	FALSE
chr1	119574537	G	A	0.00255	WARS2	-	FALSE
chr1	24288530	A	T	0.00915	PNRC2	+	FALSE
chr1	160966351	T	C	0.00034	F11R	-	TRUE	AluSg	SINE,Alu
chr1	193054574	G	T	0.00511	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr3	30733403	A	T	0.00110	TGFBR2	+	FALSE	(TA)n	SINE,Alu
chr1	183876182	C	T	0.00494	RGL1	+	FALSE
chr1	16060892	C	T	0.00946	PLEKHM2	+	FALSE
chr12	12967264	C	G	0.00781	DDX47	+	FALSE
chr1	9643107	A	G	0.00859		.	FALSE	AluSx	SINE,Alu
chr1	20982216	T	A	0.00065	DDOST	-	FALSE
chr1	26143725	A	T	0.00988	SEPN1	+	FALSE	AluSx	SINE,Alu
chr15	33064461	C	T	0.00653	FMN1	-	FALSE
chr1	92865902	A	G	0.00040		.	FALSE	AluJr	SINE,Alu
chr17	46024807	C	T	0.00295	PNPO	+	FALSE
chr16	10625049	T	C	1.15092E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr9	137330709	G	T	0.00965	RXRA	+	FALSE	(GCTG)n	SINE,Alu
chr1	1647814	T	C	7.10450E-06	CDK11B,CDK11A	-	FALSE
chr1	36068227	T	C	0.00398	PSMB2	-	TRUE	AluSc	SINE,Alu
chr11	118661811	T	G	0.00582	DDX6	-	FALSE
chr1	114307293	A	G	0.00499	RSBN1	-	FALSE
chr2	201774244	T	C	0.00332		.	FALSE	AluSz	SINE,Alu
chr7	152551581	T	A	0.00313	ACTR3B	+	FALSE
chr1	40147817	C	A	0.00982	HPCAL4	-	FALSE
chr5	56177846	G	C	0.00952	MAP3K1	+	FALSE
chr2	101186088	C	T	0.00817	PDCL3	+	FALSE
chr7	193091	C	T	1.15297E-06	FAM20C	+	FALSE
chr3	193854148	T	A	0.00106	HES1	+	FALSE
chr5	125962344	A	G	0.00101	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	17298138	A	T	0.00465	CROCC	+	FALSE
chr1	36067752	T	C	1.27861E-08	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	161931167	A	G	0.00251	ATF6	+	FALSE
chr2	174090339	A	C	2.67746E-05	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	25890189	A	G	0.00072	LDLRAP1	+	FALSE
chr8	91637754	A	T	0.00297	TMEM64	-	FALSE
chr1	145369589	T	C	0.00128	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr5	79279310	T	A	0.00173	MTX3	-	FALSE
chr2	208619675	A	G	0.00012	CCNYL1	+	TRUE	AluJb	SINE,Alu
chr5	139931630	A	T	0.00052	SRA1	-	FALSE
chr1	120695749	A	G	0.00130		.	FALSE
chr1	205129319	G	A	0.00177	DSTYK	-	FALSE
chr7	131241085	G	A	0.00600	PODXL	-	FALSE	(GCA)n	SINE,Alu
chr6	24720539	G	C	0.00225		.	FALSE
chr1	10520219	T	C	0.00201		.	FALSE	AluSx	SINE,Alu
chr1	33148716	T	C	0.00835	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	33765752	G	A	0.00963	ZNF362	+	FALSE
chr1	201845881	A	C	0.00032	IPO9	+	FALSE
chr1	67896025	G	A	5.77574E-06	SERBP1	-	FALSE
chr17	1683647	T	C	0.00763	SMYD4	-	TRUE	AluJb	SINE,Alu
chr4	101946461	G	T	0.00442	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr1	47184569	G	C	0.00027	EFCAB14	-	FALSE
chr16	56510334	T	C	0.00494	OGFOD1	+	FALSE
chr11	45827050	G	C	0.00045	SLC35C1	+	FALSE
chr10	1086810	T	A	0.00245	IDI2-AS1,IDI1	+,-	FALSE
chr1	145513112	A	G	0.00080	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr11	119533723	A	G	0.00169	NECTIN1	-	FALSE
chr7	22983890	T	C	0.00097	FAM126A	-	FALSE
chr1	10520487	T	C	0.00257		.	FALSE	AluSx1	SINE,Alu
chr3	136667405	T	C	0.00190	NCK1	+	FALSE
chr15	65249466	A	G	2.07949E-05	ANKDD1A	+	TRUE	AluSz6	SINE,Alu
chr2	37331025	T	C	0.00055		.	FALSE	AluSx1	SINE,Alu
chr1	94351063	A	T	0.00855	GCLM	-	FALSE
chr2	191745643	A	C	0.00011	GLS	+	FALSE	(GCA)n	SINE,Alu
chr14	23441380	T	C	0.00102	AJUBA	-	TRUE	Eutr2	SINE,Alu
chr1	179829401	T	C	0.00118	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr5	71654855	G	C	0.00414	PTCD2	+	FALSE
chr1	110170896	T	C	0.00140	AMPD2	+	FALSE
chr1	6282426	T	C	0.00513	ICMT	-	TRUE	AluSz	SINE,Alu
chr7	21941589	T	A	0.00535	CDCA7L	-	FALSE
chr3	40578933	A	G	0.00947	ZNF621	+	TRUE	AluJr	SINE,Alu
chr15	90820095	A	G	6.27827E-07		.	FALSE	AluY	SINE,Alu
chr16	88785189	T	C	0.00636	PIEZO1	-	TRUE	AluJr	SINE,Alu
chr1	11979815	A	C	0.00042	KIAA2013	-	FALSE
chr12	123347005	T	A	0.00268	HIP1R	+	FALSE
chr1	138156	G	T	0.00413	LOC729737	-	FALSE
chr1	10044367	A	G	5.42058E-05	NMNAT1	+	TRUE	AluSx1	SINE,Alu
chr1	26755536	A	G	0.00515	LIN28A	+	TRUE	AluSc	SINE,Alu
chr18	47014856	T	A	0.00722	RPL17-C18orf32,RPL17	-	FALSE
chr2	24227417	A	G	0.00831		.	FALSE	AluSc	SINE,Alu
chr9	33624856	C	T	0.00823	ANXA2P2	+	FALSE
chr1	148556726	G	T	0.00976		.	FALSE
chr13	46700519	C	A	0.00089	LCP1	-	FALSE
chr16	10626624	T	C	0.00334	EMP2	-	FALSE	(T)n	SINE,Alu
chr3	33909611	C	T	0.00598	PDCD6IP	+	FALSE
chr3	195694454	C	T	0.00307	SDHAP1	-	FALSE
chr12	25358943	T	C	0.00310	KRAS	-	FALSE
chr1	154987526	C	T	0.00218	ZBTB7B	+	FALSE
chr4	17802819	T	C	0.00747	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	38423199	A	T	0.00192	SF3A3	-	FALSE	AluJo	SINE,Alu
chr2	188385337	C	T	0.00210	TFPI	-	FALSE	L1MC3	SINE,Alu
chr1	46076462	A	G	1.23194E-07	NASP	+	TRUE	AluSx	SINE,Alu
chr2	38971059	A	C	0.00539	SRSF7	-	FALSE
chr1	55207983	T	A	0.00018	MROH7-TTC4,TTC4	+	FALSE
chr1	36068369	T	C	0.00252	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	37330611	T	C	0.00249		.	FALSE	AluSq2	SINE,Alu
chr7	44839297	A	T	0.00777	PPIA	+	FALSE
chr1	11084103	T	A	0.00118	TARDBP	+	FALSE
chr1	160966301	T	C	7.77749E-07	F11R	-	TRUE	AluSg	SINE,Alu
chr14	21929044	T	C	3.48024E-06	RAB2B	-	TRUE	AluSp	SINE,Alu
chr6	3022725	T	C	0.00081	HTATSF1P2	-	TRUE	AluSz	SINE,Alu
chr2	23865260	T	C	0.00262	KLHL29	+	FALSE
chr2	202152108	A	G	0.00018	CASP8	+	FALSE	AluJb	SINE,Alu
chr1	53291425	A	G	2.55913E-05	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr2	69685864	A	C	0.00610	AAK1	-	FALSE	(CA)n	SINE,Alu
chr2	11323079	T	A	0.00586	ROCK2	-	FALSE	(TA)n	SINE,Alu
chr3	40503557	T	C	0.00487	RPL14	+	FALSE
chr8	30536143	T	C	0.00883	GSR	-	TRUE	AluJr	SINE,Alu
chr20	62598815	C	T	0.00711	ZNF512B	-	FALSE
chr1	40539212	C	A	0.00380	PPT1	-	FALSE
chr1	209605640	A	C	0.00581	MIR205HG	+	FALSE	(AGC)n	SINE,Alu
chr1	1447756	G	C	0.00354	ATAD3A	+	FALSE
chr1	16895634	T	G	0.00472	NBPF1	-	FALSE
chr3	49571462	G	T	0.00032	DAG1	+	FALSE
chr1	1252468	T	C	0.00096	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	327538	A	G	0.00010		.	FALSE
chr1	78414310	C	A	9.26299E-05	FUBP1	-	FALSE
chr19	200571	T	C	0.00079	LINC01002	-	FALSE
chr1	47844500	T	G	0.00596	CMPK1	+	FALSE
chr5	43609343	C	T	0.00556	NNT	+	FALSE
chr3	49395693	C	G	0.00243	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr1	19934793	G	A	0.00068	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr3	160219095	G	A	0.00620	KPNA4	-	FALSE	A-rich	SINE,Alu
chr2	129024313	A	G	0.00612	HS6ST1	-	FALSE
chr1	21545089	C	T	0.00010	ECE1	-	FALSE	AluSx1	SINE,Alu
chr1	36068325	T	C	5.92205E-06	PSMB2	-	TRUE	AluSc	SINE,Alu
chr17	40466890	G	T	0.00260	STAT3	-	FALSE	AluSc8	SINE,Alu
chr1	1662764	T	C	0.00505	SLC35E2	-	TRUE	AluY	SINE,Alu
chr3	44790772	T	C	0.00024	KIAA1143	-	TRUE	AluY	SINE,Alu
chr3	120128940	A	G	0.00434	FSTL1	-	FALSE
chr2	9661424	G	C	0.00130	ADAM17	-	FALSE
chr3	45959759	T	C	0.00818	FYCO1	-	FALSE
chr1	28826118	A	G	0.00948	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr2	206987205	T	C	0.00039		.	FALSE	AluSx	SINE,Alu
chr1	47767914	G	A	0.00636	STIL	-	FALSE
chr3	172224303	A	G	0.00524	TNFSF10	-	FALSE
chr14	31916944	T	C	1.05468E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr1	67875011	G	T	0.00359	SERBP1	-	FALSE
chr7	55433884	A	C	0.00723	LANCL2	+	FALSE
chr5	79923990	T	C	0.00812	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	145281543	C	T	0.00028	NBPF20,NOTCH2NL	+	FALSE
chr17	78294253	A	G	0.00031	RNF213	+	TRUE	AluSp	SINE,Alu
chr1	36068231	T	C	0.00582	PSMB2	-	TRUE	AluSc	SINE,Alu
chr12	98943214	A	G	4.64520E-05	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	148561089	T	C	0.00975	NBPF15	+	FALSE
chr1	36068325	T	C	0.00065	PSMB2	-	TRUE	AluSc	SINE,Alu
chr19	23542304	T	C	2.38814E-05	ZNF91	-	TRUE	AluY	SINE,Alu
chr1	36067833	T	C	3.75622E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	145512937	A	G	1.47906E-06	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr12	124146067	A	G	1.77884E-06	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr1	33150643	G	A	0.00606	SYNC,RBBP4	+,-	FALSE	AluJo	SINE,Alu
chr9	131812176	C	T	0.00220	MIGA2	+	FALSE
chr3	69154081	G	A	0.00999	ARL6IP5	+	FALSE
chr1	19566382	A	G	0.00513	LOC101927895,EMC1	+,-	FALSE
chr3	189675266	G	T	0.00781	P3H2	-	FALSE	(TG)n	SINE,Alu
chr3	10192798	A	G	0.00014	VHL	+	TRUE	AluSx1	SINE,Alu
chr4	2070260	G	A	0.00724	NAT8L	+	FALSE	(TG)n	SINE,Alu
chr1	10519946	T	C	0.00033		.	FALSE	AluJr	SINE,Alu
chr1	145369589	T	C	0.00046	NBPF20,NBPF10	+	FALSE	L1MC4	SINE,Alu
chr7	4809333	A	G	0.00067	FOXK1	+	TRUE	AluSx1	SINE,Alu
chr1	1650807	T	C	0.00104	CDK11B,CDK11A	-	FALSE
chr1	24296874	G	A	0.00627		.	FALSE	AluSg	SINE,Alu
chr1	211920314	T	C	0.00938	LPGAT1	-	FALSE
chr5	37289051	T	C	0.00014		.	FALSE	AluSp	SINE,Alu
chr2	170497651	C	T	0.00195		.	FALSE
chr1	10517950	G	C	0.00449		.	FALSE
chr2	11728089	C	T	0.00352	GREB1	+	FALSE	AluSz	SINE,Alu
chr3	170114078	A	C	0.00219	SKIL	+	FALSE
chr1	148753279	G	T	0.00358		.	FALSE
chr19	49468569	G	T	0.00266	FTL	+	FALSE
chr8	37717121	C	A	0.00087	RAB11FIP1	-	FALSE
chr2	20449605	C	T	0.00871	PUM2	-	FALSE
chr5	79923788	T	C	0.00693	DHFR	-	TRUE	AluSp	SINE,Alu
chr2	3609064	G	A	0.00614	RNASEH1-AS1	+	FALSE	MER33	SINE,Alu
chr12	51325237	A	G	5.73531E-05	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr5	145666109	A	T	0.00728	RBM27	+	FALSE
chr1	28825466	A	G	0.00701	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr5	133918134	G	T	0.00404	JADE2	+	FALSE
chr2	201842323	T	C	0.00591	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	19665557	A	C	0.00365	CAPZB	-	FALSE
chr1	109475629	A	G	0.00744	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	65692499	C	T	0.00235	AK4	+	FALSE	(T)n	SINE,Alu
chr6	138413269	A	G	0.00743	PERP	-	FALSE
chr1	10521254	T	C	0.00522	DFFA	-	TRUE	AluY	SINE,Alu
chr10	75009722	T	C	0.00555	DNAJC9-AS1,MRPS16	+,-	FALSE	AluY	SINE,Alu
chr1	16933650	A	G	0.00258	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr1	46076467	A	G	0.00118	NASP	+	TRUE	AluSx	SINE,Alu
chr1	21101369	T	C	0.00028	HP1BP3	-	TRUE	AluSc	SINE,Alu
chr2	202038657	A	G	0.00354		.	FALSE	AluSx1	SINE,Alu
chr1	109192040	T	C	6.39517E-05	HENMT1	-	TRUE	AluJr	SINE,Alu
chr3	158320703	C	A	0.00841	MLF1	+	FALSE
chr1	182569318	G	T	0.00829	RGS16	-	FALSE
chr1	3761479	C	T	0.00226	CEP104	-	FALSE
chr1	1650657	C	G	0.00379	CDK11B,CDK11A	-	FALSE
chr1	16929100	C	T	0.00348	NBPF1	-	FALSE	LTR16B2	SINE,Alu
chr3	167727417	C	T	2.31470E-08	GOLIM4	-	FALSE
chr1	33149363	A	G	0.00237	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	201489569	G	A	0.00145	RPS10P7	+	FALSE
chr1	89225976	T	C	0.00586	PKN2	+	FALSE
chr2	61416403	T	G	0.00350	USP34	-	FALSE	AluSc8	SINE,Alu
chr1	9160989	T	C	0.00183		.	FALSE	AluJb	SINE,Alu
chr2	176791250	T	C	0.00078	LNPK	-	TRUE	MSTD	SINE,Alu
chr1	183595345	A	T	0.00383	ARPC5	-	FALSE
chr17	18111804	T	G	0.00487	ALKBH5	+	FALSE	(TTTTGTT)n	SINE,Alu
chr3	5258236	G	C	3.37681E-06	EDEM1	+	FALSE
chr5	40829980	T	C	0.00752		.	FALSE	AluSp	SINE,Alu
chr2	220308581	A	C	0.00029	SPEG	+	FALSE
chr5	34906156	T	C	2.52494E-05	RAD1	-	TRUE	AluSx1	SINE,Alu
chr13	111111173	G	A	0.00224	COL4A2,COL4A2-AS2	+,-	FALSE
chr1	109181304	C	A	0.00592	FAM102B	+	FALSE
chr2	11321880	C	T	0.00064	ROCK2	-	FALSE	AluSx1	SINE,Alu
chr12	100562932	G	T	0.00079	GOLGA2P5	-	FALSE	AluSg	SINE,Alu
chr2	37328034	T	C	0.00035		.	FALSE
chr1	10517290	T	C	0.00366		.	FALSE	AluJr	SINE,Alu
chr5	149361415	A	G	0.00290	SLC26A2	+	TRUE
chr5	34189578	T	C	0.00378		.	FALSE
chr1	70718278	C	G	0.00663		.	FALSE
chr1	28661653	A	G	9.75782E-05	MED18	+	TRUE	AluSg	SINE,Alu
chr19	13884096	A	G	0.00049	MRI1	+	TRUE	AluSz	SINE,Alu
chr1	222713503	C	G	0.00860	HHIPL2	-	FALSE
chr19	54971229	T	C	0.00202	LENG8	+	FALSE
chr1	33086834	T	C	0.00251	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr2	176791759	A	C	0.00232	LNPK	-	FALSE	L2b	SINE,Alu
chr1	193054576	T	C	0.00068	TROVE2	+	FALSE	(ATTTT)n	SINE,Alu
chr1	146649884	T	A	0.00338	PDIA3P1	+	FALSE
chr1	10517659	T	C	0.00516		.	FALSE	AluSx1	SINE,Alu
chr1	40537944	C	A	0.00076	CAP1	+	FALSE
chr5	176728458	G	T	0.00901	RAB24	-	FALSE
chr4	39550715	T	C	0.00995	UGDH-AS1,SMIM14	+,-	FALSE	AluSx1	SINE,Alu

RBP	EEF2
Knock-Method	shRNA
RBP Family	GTP_EFTU
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR477TRX
Platform	HiSeq
Pubmed ID	32252787

EEF2 - Target Gene Network