RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr19	42376675	A	G	0.00085		.	FALSE
chr1	16534255	C	G	0.00980	ARHGEF19	-	FALSE
chr3	183890097	G	A	1.43668E-06	DVL3	+	FALSE
chr5	154194420	G	A	0.00137	LARP1	+	FALSE
chr2	55459824	C	T	0.00763	RPS27A	+	FALSE
chr1	225678219	T	C	0.00080	ENAH	-	TRUE	AluSx	SINE,Alu
chr1	23636277	A	T	0.00632	HNRNPR	-	FALSE
chr8	145159706	C	G	0.00561	MAF1	+	FALSE
chr1	33149373	A	G	0.00239	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr6	42855979	A	G	8.12389E-06	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr10	116603648	A	G	0.00267	FAM160B1	+	FALSE
chr1	53289686	A	G	0.00222	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr8	30536151	T	C	5.90006E-09	GSR	-	TRUE	AluJr	SINE,Alu
chr17	57281098	A	G	0.00181	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	148561089	T	C	0.00011	NBPF15	+	FALSE
chr2	99813007	A	G	0.00027	MRPL30	+	TRUE	AluJb	SINE,Alu
chr1	228880135	C	T	0.00026	RHOU	+	FALSE
chr1	6653508	G	A	0.00320	KLHL21	-	FALSE
chr2	206987229	T	C	0.00743		.	FALSE	AluSx	SINE,Alu
chr1	10520692	T	C	0.00973	DFFA	-	TRUE	AluSc8	SINE,Alu
chr3	172117459	C	A	0.00791	FNDC3B	+	FALSE
chr2	37327665	T	C	2.45403E-06		.	FALSE
chr1	120839681	C	A	0.00125	FAM72B	+	FALSE
chr1	53289688	A	G	5.35400E-06	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	19232017	T	G	0.00723	IFFO2	-	FALSE
chr4	6644459	C	A	0.00109	MRFAP1	+	FALSE
chr1	45975574	A	G	0.00299	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr3	18427924	G	T	0.00312	SATB1	-	FALSE
chr1	20982631	G	A	0.00133	DDOST	-	FALSE
chr1	95658344	G	A	0.00100	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr7	44841931	A	G	0.00054	PPIA	+	TRUE	AluSx	SINE,Alu
chr6	157405930	G	A	0.00077	ARID1B	+	FALSE
chr1	10517276	T	C	0.00779		.	FALSE	AluJr	SINE,Alu
chr2	272203	C	T	0.00064	ACP1	+	FALSE
chr1	109475629	A	G	0.00744	GPSM2,CLCC1	+,-	FALSE	AluJo	SINE,Alu
chr1	52381350	T	G	4.39398E-08	RAB3B	-	FALSE
chr1	31345067	G	T	0.00804	SDC3	-	FALSE
chr7	38763068	T	C	0.00361		.	FALSE	AluSx3	SINE,Alu
chr7	19736460	A	G	6.53378E-05	TWISTNB	-	FALSE	MER33	SINE,Alu
chr1	15993013	G	A	1.61862E-10		.	FALSE
chr1	10519048	T	C	0.00637		.	FALSE	AluSx3	SINE,Alu
chr1	28662212	A	G	0.00098	MED18	+	TRUE	AluSq2	SINE,Alu
chr12	19671149	C	T	0.00315	AEBP2	+	FALSE
chr1	193054154	G	A	0.00757	TROVE2	+	FALSE
chr2	24225006	A	G	0.00141		.	FALSE	AluSx	SINE,Alu
chr7	44800040	C	A	0.00565	ZMIZ2	+	FALSE
chr5	130538304	A	G	0.00050	LYRM7	+	TRUE	FAM	SINE,Alu
chr1	28825331	A	G	1.84239E-05	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr17	1684352	T	C	0.00793	SMYD4	-	TRUE	AluSx1	SINE,Alu
chr1	1534205	G	A	1.69659E-11	FNDC10	-	FALSE
chr1	1419775	A	G	0.00090	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr5	43290210	A	G	0.00565	HMGCS1	-	FALSE	A-rich	SINE,Alu
chr3	44791398	T	C	0.00204	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr7	94297293	G	T	0.00573	PEG10	+	FALSE
chr20	18468404	T	C	0.00301	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr17	53470462	C	T	0.00230	MMD	-	FALSE
chr1	10042987	A	G	0.00488	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr9	131812176	C	T	0.00220	MIGA2	+	FALSE
chr1	117530477	G	A	0.00223	PTGFRN	+	FALSE
chr12	133298069	A	G	6.69127E-09	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	6283264	T	C	0.00378	ICMT	-	TRUE	AluSx3	SINE,Alu
chr4	155457601	T	C	0.00423	PLRG1	-	FALSE
chr1	320211	A	G	6.69717E-05		.	FALSE	AluJo	SINE,Alu
chr3	98518155	A	T	0.00777	DCBLD2	-	FALSE
chr1	142804438	G	T	0.00618		.	FALSE
chr1	1469782	G	C	0.00544	ATAD3A	+	FALSE
chr1	27202844	T	C	0.00146		.	FALSE	AluSq2	SINE,Alu
chr2	29170763	G	A	5.21672E-05	WDR43	+	FALSE
chr1	201846626	C	A	0.00429	IPO9	+	FALSE	(CA)n	SINE,Alu
chr19	9673107	T	C	1.71894E-07		.	FALSE	AluSx3	SINE,Alu
chr1	65692500	T	C	0.00281	AK4	+	FALSE	(T)n	SINE,Alu
chr1	119574537	G	A	0.00935	WARS2	-	FALSE
chr1	19542269	T	C	0.00744	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	61277775	A	G	0.00640	PEX13	+	TRUE	AluY	SINE,Alu
chr6	31378510	G	A	0.00104		.	FALSE
chr7	100031496	T	A	0.00119	MEPCE	+	FALSE
chr1	11814631	A	G	5.11326E-05		.	FALSE
chr1	16890630	T	G	0.00147	NBPF1	-	FALSE
chr2	29023117	A	T	0.00805	PPP1CB	+	FALSE
chr3	113528895	A	T	0.00191	ATP6V1A	+	FALSE	AluSp	SINE,Alu
chr9	34088029	C	T	0.00501	DCAF12	-	FALSE
chr1	14150032	C	T	0.00163	PRDM2	+	FALSE
chr7	79848334	G	T	0.00158	GNAI1	+	FALSE
chr19	17412218	C	T	0.00790	ABHD8	-	FALSE
chr1	26796922	G	C	0.00401	DHDDS	+	FALSE	FLAM_C	SINE,Alu
chr3	10302056	A	G	0.00018	TATDN2	+	FALSE
chr2	37328008	T	C	0.00733		.	FALSE
chr3	44790759	T	C	0.00744	KIAA1143	-	TRUE	AluY	SINE,Alu
chr2	170497653	T	G	0.00587		.	FALSE
chr1	24999463	G	T	0.00012	SRRM1	+	FALSE	(T)n	SINE,Alu
chr1	145311900	C	T	0.00286	NBPF20,NBPF10	+	FALSE
chrX	123047170	A	G	0.00855	XIAP	+	FALSE	AluSx	SINE,Alu
chr7	80373463	A	C	0.00399	SEMA3C	-	FALSE
chr16	10623666	T	C	1.68352E-07	EMP2	-	TRUE	AluSp	SINE,Alu
chr1	6582161	T	C	0.00697	NOL9	-	TRUE	AluSq4	SINE,Alu
chr3	63996262	C	T	0.00273	PSMD6-AS2,PSMD6	+,-	FALSE
chr1	16889502	T	C	5.54778E-06	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	1647814	T	C	0.00123	CDK11B,CDK11A	-	FALSE
chr4	39780672	C	A	0.00743	UBE2K	+	FALSE
chr1	94982784	T	A	0.00179	ABCD3	+	FALSE
chr11	126147697	G	A	0.00237	FOXRED1	+	FALSE
chr3	88104168	C	T	0.00919	CGGBP1	-	FALSE
chr3	10193683	T	G	0.00681	VHL	+	FALSE	AluJr	SINE,Alu
chr2	37331525	T	C	0.00091		.	FALSE	AluJb	SINE,Alu
chr1	28567501	A	G	0.00887		.	FALSE
chr8	25317824	A	T	0.00017	CDCA2	+	FALSE
chr3	194789330	G	T	0.00150	XXYLT1	-	FALSE	AluJr	SINE,Alu
chr1	92862836	A	G	0.00430		.	FALSE	AluJr	SINE,Alu
chr3	107526182	T	C	7.17610E-07	BBX	+	FALSE
chr2	234385276	T	C	0.00951	USP40	-	FALSE
chr1	27202845	T	C	0.00034		.	FALSE	AluSq2	SINE,Alu
chr1	43167907	T	C	0.00072	YBX1	+	FALSE
chr8	146200271	T	C	0.00182	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr1	11159823	T	C	0.00186	EXOSC10,LOC105376736	+,-	FALSE
chr6	33268621	T	C	0.00367		.	FALSE	AluY	SINE,Alu
chr3	98518158	A	T	1.44910E-06	DCBLD2	-	FALSE
chr2	204301754	C	G	0.00012	RAPH1	-	FALSE
chr2	234775941	A	G	0.00161	MSL3P1	-	FALSE
chr1	114443574	A	G	0.00162	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr1	9416574	A	G	0.00144	SPSB1	+	FALSE
chr1	10518734	T	C	0.00249		.	FALSE	AluSx1	SINE,Alu
chr9	139417333	G	A	0.00463	NOTCH1	-	FALSE
chr1	184761312	T	C	0.00308	FAM129A	-	TRUE	AluJo	SINE,Alu
chr17	73886249	T	C	0.00069	TRIM65	-	TRUE	FRAM	SINE,Alu
chr1	24295888	T	A	0.00240		.	FALSE
chr1	36068295	T	C	0.00393	PSMB2	-	TRUE	AluSc	SINE,Alu
chr7	55433880	G	C	0.00115	LANCL2	+	FALSE
chr12	69237020	A	G	0.00378	MDM2	+	TRUE
chr1	19934930	T	C	0.00026	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chrX	152916235	G	A	0.00015	DUSP9	+	FALSE
chr1	16889566	T	C	0.00305	NBPF1	-	TRUE
chr1	46164678	T	C	0.00773	IPP	-	TRUE	AluJb	SINE,Alu
chr3	112720122	T	A	0.00679	GTPBP8	+	FALSE
chr3	40577761	A	G	0.00701	ZNF621	+	TRUE	AluSz	SINE,Alu
chr2	227659846	T	G	0.00653	IRS1	-	FALSE	G-rich	SINE,Alu
chr1	54691922	T	A	0.00224	SSBP3	-	FALSE
chr1	16909161	T	C	0.00718	NBPF1	-	FALSE
chr6	114182251	C	T	0.00021	MARCKS	+	FALSE
chr19	42376711	A	G	5.78075E-06		.	FALSE	AluSp	SINE,Alu
chr1	206579798	T	C	0.00883	SRGAP2	+	FALSE
chr1	144606963	G	T	0.00080	NBPF20	+	FALSE
chr1	150704633	T	C	1.58455E-05	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	201845882	G	A	0.00890	IPO9	+	FALSE
chr1	109855150	A	C	0.00062	SORT1	-	FALSE	A-rich	SINE,Alu
chr1	10520532	T	C	0.00013		.	FALSE	AluSx1	SINE,Alu
chr1	19542310	T	C	0.00873	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	16892135	G	A	0.00508	NBPF1	-	FALSE
chr2	128064448	G	T	0.00602	MAP3K2	-	FALSE	(GT)n	SINE,Alu
chr1	46075171	A	C	0.00140	NASP	+	FALSE	A-rich	SINE,Alu
chr1	154320942	A	G	0.00579	ATP8B2	+	FALSE
chr16	75479470	T	C	3.73920E-07	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr13	38936619	G	T	0.00212	UFM1	+	FALSE
chr5	150827307	G	T	0.00708	SLC36A1	+	FALSE
chr3	98516118	T	A	0.00541	DCBLD2	-	FALSE
chr1	120839682	A	G	0.00073	FAM72B	+	FALSE
chr1	19542239	T	C	0.00032	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr2	20401854	A	T	2.80783E-05	SDC1	-	FALSE
chr14	50053315	G	A	0.00150		.	FALSE	7SLRNA	SINE,Alu
chr1	169101257	A	T	0.00144	ATP1B1	+	FALSE
chr1	145322843	C	T	0.00271	NBPF20,NBPF10	+	FALSE
chr5	78532658	C	T	0.00882	JMY	+	FALSE
chr2	48025764	C	T	0.00722	MSH6	+	FALSE
chr1	47184569	G	C	0.00027	EFCAB14	-	FALSE
chr3	75779619	T	A	0.00061	ZNF717	-	FALSE
chr1	39500293	T	A	0.00552	NDUFS5	+	FALSE
chr1	74665493	G	A	0.00128	FPGT-TNNI3K,FPGT	+	FALSE
chr3	57613144	T	C	0.00959	DENND6A,PDE12	+,-	FALSE	AluSz	SINE,Alu
chr2	152132130	A	G	6.12116E-05	NMI	-	FALSE
chr1	113672691	A	G	0.00515		.	FALSE	AluJb	SINE,Alu
chr1	46016687	T	C	0.00296	AKR1A1	+	FALSE
chr5	56177872	A	G	0.00618	MAP3K1	+	TRUE	(CAA)n	SINE,Alu
chr4	1387223	A	G	0.00155	CRIPAK	+	TRUE	AluSx	SINE,Alu
chr4	2940434	T	C	1.52137E-05	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	17085028	G	A	0.00803	MST1L,LOC102724562	-	FALSE
chr2	200792307	G	A	0.00596	C2orf69	+	FALSE
chr1	144931392	G	A	0.00241	NBPF20,PDE4DIP	+,-	FALSE
chr1	9324451	C	T	0.00266	H6PD	+	FALSE
chr1	16952481	A	G	5.15865E-05	CROCCP2	-	FALSE
chr19	1037984	T	C	0.00908	CNN2	+	FALSE	(TT)n	SINE,Alu
chr3	44790759	T	C	1.45198E-07	KIAA1143	-	TRUE	AluY	SINE,Alu
chr12	27953264	A	T	0.00688	KLHL42	+	FALSE
chr2	37330576	T	C	0.00055		.	FALSE	AluSq2	SINE,Alu
chr21	37789767	A	G	0.00236		.	FALSE	AluSx	SINE,Alu
chr3	48787640	T	C	0.00038	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr2	174090336	A	C	0.00331	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	28920925	A	G	0.00294	RAB42	+	TRUE	AluSx	SINE,Alu
chr11	68523472	T	C	0.00649	CPT1A	-	TRUE	AluSq	SINE,Alu
chr2	55452458	G	T	0.00113	CLHC1	-	FALSE
chr3	33038221	C	T	0.00379	GLB1	-	FALSE
chr2	206983087	T	C	0.00364		.	FALSE	AluJb	SINE,Alu
chr1	44818529	T	C	0.00310	ERI3	-	FALSE
chr2	128064423	C	T	0.00063	MAP3K2	-	FALSE
chr1	87794771	G	C	0.00989	LMO4	+	FALSE
chr1	31345785	T	A	0.00962	SDC3	-	FALSE
chr3	30735330	G	T	0.00401	TGFBR2	+	FALSE
chr1	28836975	A	G	0.00023	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	16892256	T	C	0.00468	NBPF1	-	FALSE
chr4	169299528	T	C	0.00745	DDX60L	-	FALSE
chr1	144595935	G	A	0.00061	NBPF20	+	FALSE	AluJb	SINE,Alu
chr2	232319593	A	C	0.00348	NCL	-	FALSE	A-rich	SINE,Alu
chr1	900721	T	C	0.00032	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr19	8005999	T	C	0.00027	TIMM44	-	FALSE
chr1	10517691	T	C	0.00558		.	FALSE	AluSx1	SINE,Alu
chr1	201846627	A	T	0.00571	IPO9	+	FALSE	(CA)n	SINE,Alu
chr3	10193475	A	G	0.00110	VHL	+	TRUE	AluJr	SINE,Alu
chr2	206983138	T	C	0.00669		.	FALSE	AluJb	SINE,Alu
chr1	150969257	T	C	0.00400		.	FALSE	AluSq2	SINE,Alu
chr6	36894337	G	A	0.00607	C6orf89	+	FALSE	GA-rich	SINE,Alu
chr1	148023637	C	T	0.00014	NBPF8	-	FALSE
chr7	100031495	C	T	0.00475	MEPCE	+	FALSE
chr1	19578192	G	A	0.00246	MRTO4	+	FALSE
chr1	16890644	C	T	0.00439	NBPF1	-	FALSE
chr17	4856580	T	C	0.00922	ENO3	+	FALSE
chr5	40832557	G	T	0.00814	RPL37	-	FALSE
chr4	139966801	A	G	0.00282	NOCT	+	TRUE	AluYj4	SINE,Alu
chr3	99886662	G	A	0.00011	CMSS1	+	FALSE
chr2	217366901	A	G	0.00143		.	FALSE	AluSz6	SINE,Alu
chr1	206579936	A	G	0.00424	SRGAP2	+	FALSE
chr1	16893691	C	A	0.00371	NBPF1	-	FALSE
chr2	86252038	T	C	0.00453	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr9	130268408	T	C	6.51633E-05	FAM129B	-	FALSE	(CTCA)n	SINE,Alu
chr1	134370	T	C	0.00327		.	FALSE	AluSg	SINE,Alu
chr1	28826130	A	G	0.00207	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	6308456	G	A	0.00169	GPR153	-	FALSE
chr1	327407	A	G	3.55459E-07		.	FALSE
chr1	67874705	T	C	0.00015	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr5	82877162	G	A	0.00296	VCAN	+	FALSE	(A)n	SINE,Alu
chr1	31532312	C	T	0.00215	PUM1	-	FALSE
chr1	229730452	G	A	0.00236	TAF5L	-	FALSE
chr1	156563898	T	C	0.00216	NAXE	+	FALSE
chr1	184663537	A	C	0.00256	EDEM3	-	FALSE
chr1	26608014	C	A	0.00328		.	FALSE
chr1	40923019	G	A	0.00019	ZFP69B	+	FALSE
chr2	187544223	T	G	0.00254	ITGAV	+	FALSE
chr1	86049364	A	G	0.00207	CYR61	+	FALSE
chr1	247319489	G	A	0.00729	ZNF124	-	FALSE
chr1	86117122	T	C	0.00462	ZNHIT6	-	FALSE	AluSg	SINE,Alu
chr1	206635244	T	A	0.00188	SRGAP2	+	FALSE
chr1	54692334	T	C	0.00021	SSBP3	-	FALSE	(T)n	SINE,Alu
chr1	160967816	T	C	0.00162	F11R	-	TRUE	AluSp	SINE,Alu
chr1	115275398	T	G	0.00474	CSDE1	-	FALSE
chr3	160969268	C	T	0.00375	NMD3	+	FALSE
chr11	34379275	T	C	0.00994	ABTB2	-	FALSE
chr1	45975345	A	G	9.37661E-05	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr10	73994158	A	G	0.00110	ANAPC16	+	TRUE	AluJr	SINE,Alu
chr2	206983255	T	C	0.00246		.	FALSE	AluJb	SINE,Alu
chr6	24720539	G	C	0.00225		.	FALSE
chr1	203839213	T	A	0.00800	SNRPE	+	FALSE
chr1	183876182	C	T	0.00494	RGL1	+	FALSE
chr1	10521238	T	C	0.00096	DFFA	-	TRUE	AluY	SINE,Alu
chr15	23282589	A	G	0.00291	HERC2P2	-	FALSE
chr10	129910475	T	G	0.00061	MKI67	-	FALSE
chr7	129592510	G	T	0.00165	UBE2H	-	FALSE
chr2	112252464	G	A	2.95640E-06	MIR4435-2HG	-	FALSE
chr5	43700242	A	G	0.00932	NNT	+	FALSE
chr2	61278030	A	G	0.00218	PEX13	+	TRUE	AluY	SINE,Alu
chr1	110136846	T	A	0.00639	GNAI3	+	FALSE
chr2	198339559	G	T	0.00712	COQ10B	+	FALSE
chr10	79800439	A	T	0.00380	RPS24	+	FALSE
chr1	46076533	A	G	0.00832	NASP	+	TRUE	AluSx	SINE,Alu
chr1	20826781	C	T	9.86003E-06	MUL1	-	FALSE
chr5	179048585	T	C	0.00150	HNRNPH1	-	FALSE
chr15	93198678	T	C	0.00064	FAM174B	-	FALSE	(GCCGCT)n	SINE,Alu
chr1	36534086	A	G	0.00157		.	FALSE	FLAM_A	SINE,Alu
chr17	43364288	A	G	0.00345	MAP3K14	-	FALSE
chr3	49395693	C	G	0.00243	GPX1	-	FALSE	(GCC)n	SINE,Alu
chr1	121133770	A	G	0.00295	SRGAP2-AS1,SRGAP2B,SRGAP2C	+,-	FALSE	L1MB4	SINE,Alu
chr5	167898510	C	G	0.00013	WWC1	+	FALSE
chr1	79356178	C	A	0.00678	ADGRL4	-	FALSE
chr19	13883923	A	G	0.00493	MRI1	+	TRUE	AluSz	SINE,Alu
chr5	149363218	A	G	0.00233	SLC26A2	+	TRUE	AluJr	SINE,Alu
chr6	42045563	A	G	4.21139E-05	TAF8	+	TRUE	AluSz	SINE,Alu
chr14	23300642	C	A	0.00266	MRPL52	+	FALSE	MIRb	SINE,Alu
chr1	108113839	T	C	0.00062	VAV3	-	FALSE
chr2	36704034	A	G	9.89157E-05	CRIM1	+	FALSE
chr7	17384334	A	G	0.00013	AHR	+	TRUE	AluSx	SINE,Alu
chr1	201975173	G	T	0.00053	RNPEP	+	FALSE
chr1	11190646	G	A	0.00644	MTOR	-	FALSE
chr1	47844500	T	G	0.00596	CMPK1	+	FALSE
chr12	98943202	A	G	6.48893E-05	TMPO	+	TRUE	AluSz	SINE,Alu
chr8	25272425	C	T	0.00605	DOCK5	+	FALSE
chr10	51943605	C	T	0.00508		.	FALSE	MLT1J	SINE,Alu
chr9	137330709	G	T	6.64722E-05	RXRA	+	FALSE	(GCTG)n	SINE,Alu
chr1	33071096	A	G	0.00238	ZBTB8A	+	TRUE	AluSx1	SINE,Alu
chr1	109746745	A	G	0.00073	KIAA1324	+	TRUE	AluJb	SINE,Alu
chr8	30643547	T	A	0.00748	PPP2CB	-	FALSE
chr1	16259813	A	G	0.00475	SPEN	+	FALSE
chr1	67874849	T	C	7.36358E-05	SERBP1	-	TRUE	AluSx	SINE,Alu
chr5	139876355	G	A	0.00815	ANKHD1,ANKHD1-EIF4EBP3	+	FALSE	GA-rich	SINE,Alu
chr19	23542193	T	C	0.00099	ZNF91	-	TRUE	AluY	SINE,Alu
chr1	93307479	C	A	0.00019	FAM69A,RPL5	+,-	FALSE
chr2	187544234	C	T	0.00078	ITGAV	+	FALSE
chr1	46828700	A	G	0.00805	NSUN4	+	FALSE
chr2	27838058	C	A	0.00063	ZNF512	+	FALSE
chr1	179832838	A	G	0.00018	TOR1AIP2	-	FALSE	MLT1L	SINE,Alu
chr1	117531096	C	T	0.00168	PTGFRN	+	FALSE
chr1	175129946	C	T	0.00466	KIAA0040	-	FALSE	(TCT)n	SINE,Alu
chr1	16928622	C	A	0.00011	NBPF1	-	FALSE
chr1	53289892	A	G	0.00079	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr3	195242996	C	A	0.00136	PPP1R2	-	FALSE
chr2	206986314	T	C	0.00936		.	FALSE	AluSz	SINE,Alu
chr1	65900357	G	T	0.00041	LEPR,LEPROT	+	FALSE
chr3	196660344	T	A	0.00366	SENP5	+	FALSE
chr8	143413136	C	T	0.00267	TSNARE1	-	FALSE
chr12	27574433	A	G	0.00473	ARNTL2,ARNTL2-AS1	+,-	FALSE	AluSz	SINE,Alu
chr5	81571877	C	T	0.00033	RPS23	-	FALSE
chr6	3154871	A	C	7.50591E-06	TUBB2A	-	FALSE
chr1	33765752	G	A	0.00963	ZNF362	+	FALSE
chr1	949608	G	A	0.00435	ISG15	+	FALSE
chr3	149036714	G	A	0.00972	TM4SF18	-	FALSE
chr20	25427856	A	G	0.00094	GINS1	+	FALSE	AluSz	SINE,Alu
chr5	35064460	G	C	0.00920	PRLR	-	FALSE
chr12	125512516	A	G	8.94889E-06		.	FALSE	AluY	SINE,Alu
chr5	141690772	C	T	0.00632	SPRY4	-	FALSE
chr2	26616356	A	G	0.00030	EPT1	+	FALSE
chr2	61277835	A	G	0.00105	PEX13	+	TRUE	AluY	SINE,Alu
chr1	144931101	G	A	0.00012	NBPF20,PDE4DIP	+,-	FALSE
chr3	42591956	G	A	0.00503	SEC22C	-	FALSE
chr6	42849616	A	G	0.00092	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr19	3467756	C	T	0.00485	NFIC	+	FALSE	(TA)n	SINE,Alu
chr1	184762524	T	C	0.00778	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	226333561	A	G	0.00373	ACBD3	-	FALSE
chr11	68523504	T	C	0.00029	CPT1A	-	TRUE	AluSq	SINE,Alu
chr3	193385047	C	T	0.00259	OPA1	+	FALSE
chr14	50361170	C	T	0.00096	ARF6	+	FALSE	(T)n	SINE,Alu
chr8	133837579	G	A	0.00019	PHF20L1	+	FALSE	A-rich	SINE,Alu
chr1	150281011	A	G	0.00016	MRPS21	+	TRUE	AluSz	SINE,Alu
chr2	10074384	G	A	0.00765	TAF1B	+	FALSE
chr4	165998019	T	C	0.00849	TMEM192	-	TRUE	AluSx	SINE,Alu
chr6	26095454	A	G	0.00284	HFE	+	TRUE	AluY	SINE,Alu
chr13	31033325	C	A	0.00792	HMGB1	-	FALSE
chr3	47036756	C	G	0.00091	NBEAL2	+	FALSE
chr1	10093371	C	T	0.00264	UBE4B	+	FALSE
chr4	119952955	C	T	0.00278	SYNPO2	+	FALSE
chr1	36067760	T	C	0.00213	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	6582761	T	C	0.00052	NOL9	-	FALSE	AluSg	SINE,Alu
chr8	146035211	T	C	0.00116	ZNF517	+	FALSE	AluSx1	SINE,Alu
chr1	53291434	A	G	0.00545	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	117532790	C	T	0.00981	PTGFRN	+	FALSE
chr15	43767774	G	C	0.00057	TP53BP1	-	FALSE
chr1	148004548	T	C	0.00220	NBPF8	-	FALSE
chr1	10519932	T	C	5.00916E-05		.	FALSE	AluJr	SINE,Alu
chr12	53435277	G	T	2.75857E-05	EIF4B	+	FALSE
chr1	93828523	T	A	0.00155		.	FALSE
chr5	130537666	A	G	0.00329	LYRM7	+	TRUE	AluJb	SINE,Alu
chr1	33148691	A	G	0.00032	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	33148706	A	G	0.00050	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr3	52109841	T	C	7.35943E-05	POC1A	-	FALSE
chr10	1086797	A	C	0.00499	IDI2-AS1,IDI1	+,-	FALSE
chr1	1234671	G	A	0.00100	ACAP3	-	FALSE
chr1	145512024	A	G	0.00836	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	5260057	A	T	0.00117	EDEM1	+	FALSE
chr3	44791293	A	T	0.00031	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr2	74348998	A	G	0.00279		.	FALSE	AluSz	SINE,Alu
chr1	65694080	C	T	0.00442	AK4	+	FALSE	(TCCC)n	SINE,Alu
chr3	10192608	A	G	0.00030	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	145323656	A	T	0.00593	NBPF20,NBPF10	+	FALSE
chrX	135300016	T	C	0.00358	MAP7D3	-	TRUE	AluSz	SINE,Alu
chr6	31506635	T	G	6.78064E-05		.	FALSE
chr8	48890114	A	G	2.61683E-11	MCM4	+	TRUE	AluJb	SINE,Alu
chr1	35899684	C	T	0.00051	KIAA0319L	-	FALSE	AluSc8	SINE,Alu
chr5	98109389	T	C	0.00234	RGMB	+	FALSE
chr1	40537924	G	A	0.00404	CAP1	+	FALSE	(A)n	SINE,Alu
chr1	3545194	C	G	0.00176	TPRG1L	+	FALSE
chr1	10518052	T	C	0.00179		.	FALSE	AluJr	SINE,Alu
chr16	81064649	A	G	0.00019	CENPN	+	TRUE	AluSg	SINE,Alu
chr1	109535128	G	A	0.00063	WDR47	-	FALSE
chr1	24288530	A	T	0.00915	PNRC2	+	FALSE
chr20	25428617	A	G	0.00622	GINS1	+	FALSE	AluJb	SINE,Alu
chr6	158505088	A	G	0.00083	SYNJ2	+	FALSE
chr2	69688917	T	C	0.00254	AAK1	-	TRUE	AluSq2	SINE,Alu
chr2	37329300	T	C	0.00092		.	FALSE	AluJr4	SINE,Alu
chr2	37330517	T	C	0.00324		.	FALSE	AluSq2	SINE,Alu
chr1	109818158	C	T	4.51493E-05	CELSR2	+	FALSE
chr1	85785107	T	C	4.02203E-05	DDAH1	-	FALSE
chr5	68858545	C	G	0.00268	GTF2H2C,GTF2H2C_2	+	FALSE	AluSz	SINE,Alu
chr11	65544575	T	C	0.00200	AP5B1	-	TRUE	AluJb	SINE,Alu
chr1	155868177	G	A	7.38851E-05	RIT1	-	FALSE
chr8	103841636	T	C	2.19081E-06	AZIN1	-	TRUE
chr1	10521130	T	C	1.15946E-05	DFFA	-	TRUE	AluY	SINE,Alu
chr4	95586224	A	G	0.00053	PDLIM5	+	FALSE
chr2	87821033	C	A	0.00474		.	FALSE
chr12	125511958	A	G	0.00010	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	9353122	C	G	0.00562	SPSB1	+	FALSE	(GCG)n	SINE,Alu

RBP	HSPD1
Knock-Method	shRNA
RBP Family	Non-canonical_RBP
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR222ABK
Platform	HiSeq
Pubmed ID	32252787

HSPD1 - Target Gene Network