RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr4	57327058	A	G	0.00315	PAICS	+	TRUE	AluSx1	SINE,Alu
chr7	300513	T	C	2.92808E-06	FAM20C	+	FALSE
chr1	1573181	C	A	0.00038	CDK11B	-	FALSE
chr7	64435684	T	G	0.00239	ZNF117	-	FALSE
chr15	44055281	T	C	0.00580	PDIA3	+	FALSE
chr3	197400501	C	G	0.00011	RUBCN	-	FALSE
chr1	899810	G	A	3.12519E-10	KLHL17	+	FALSE
chr5	137087812	A	C	0.00607	HNRNPA0	-	FALSE
chr1	28826150	A	G	0.00044	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	38275432	G	T	0.00536	MTF1	-	FALSE
chr1	33148691	A	G	2.12433E-06	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	36068210	T	C	0.00025	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	46075664	A	G	0.00537	NASP	+	TRUE	AluSx4	SINE,Alu
chr1	32373837	G	T	0.00681	PTP4A2	-	FALSE	(T)n	SINE,Alu
chr1	53291420	A	G	0.00011	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr17	421931	T	C	0.00260	VPS53	-	TRUE	AluSx	SINE,Alu
chr2	37431604	A	G	0.00876	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	152884246	G	T	0.00536	IVL	+	FALSE
chr1	32096265	A	G	0.00208	PEF1	-	FALSE
chr10	60157509	T	G	0.00296	TFAM	+	FALSE
chr2	170495929	T	A	0.00625		.	FALSE
chr1	36386884	C	T	0.00590	AGO1	+	FALSE
chr1	36067817	T	C	0.00938	PSMB2	-	TRUE	AluSz	SINE,Alu
chr12	133298053	A	G	7.95391E-05	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	38326704	T	C	0.00328	INPP5B	-	TRUE	AluJr	SINE,Alu
chr1	16933135	G	T	0.00937	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr4	57327022	A	G	0.00057	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	36032229	A	C	0.00806	NCDN	+	FALSE
chr1	33149376	A	G	0.00519	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	28825418	A	G	0.00525	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	26887592	T	C	0.00354	RPS6KA1	+	FALSE
chr1	19585903	G	A	0.00575	MRTO4	+	FALSE	AluJr	SINE,Alu
chr5	79923293	T	C	0.00039	DHFR	-	TRUE	AluJr	SINE,Alu
chr1	16918783	C	T	0.00252	NBPF1	-	FALSE
chr1	16892918	T	C	0.00590	NBPF1	-	FALSE
chr1	981931	A	G	0.00951	AGRN	+	FALSE
chr2	191745641	G	C	0.00222	GLS	+	FALSE	(GCA)n	SINE,Alu
chr2	128601556	T	C	3.22117E-06		.	FALSE	AluJr	SINE,Alu
chr1	153907287	G	C	0.00159	DENND4B	-	FALSE	(CTG)n	SINE,Alu
chr1	114443475	A	G	0.00538	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr6	25986717	A	G	0.00217	TRIM38	+	TRUE	AluJb	SINE,Alu
chr6	13788387	T	C	0.00240	MCUR1	-	TRUE	AluSx	SINE,Alu
chr1	52991638	C	T	0.00125	ZCCHC11	-	FALSE
chr1	24086794	G	T	0.00309	TCEB3	+	FALSE	(T)n	SINE,Alu
chr12	125511952	A	G	0.00138	THRIL	-	FALSE	AluSx1	SINE,Alu
chr1	109818161	C	T	0.00864	CELSR2	+	FALSE
chr1	211923085	T	G	0.00674	LPGAT1	-	FALSE
chr1	59246520	A	C	7.56706E-05	JUN	-	FALSE
chr3	57126614	C	T	0.00358	IL17RD	-	FALSE	AluY	SINE,Alu
chr1	25890189	A	G	0.00961	LDLRAP1	+	FALSE
chr7	6501820	A	T	0.00288	KDELR2	-	FALSE
chr1	6283260	T	C	0.00402	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	53708530	T	C	9.40494E-05	LRP8	-	FALSE	(TA)n	SINE,Alu
chr1	10518734	T	C	0.00249		.	FALSE	AluSx1	SINE,Alu
chr1	94995411	C	A	0.00849	F3	-	FALSE	AluSx	SINE,Alu
chr1	1345002	A	G	0.00141		.	FALSE	AluSg	SINE,Alu
chr1	10520099	T	C	0.00659		.	FALSE	AluSx	SINE,Alu
chr1	145273302	A	G	0.00656	NBPF20,NOTCH2NL	+	FALSE
chr3	160968914	T	C	0.00305	NMD3	+	FALSE
chr6	27327349	C	G	0.00359	ZNF204P	-	FALSE
chr12	1611799	A	G	0.00156	LINC00942	+	FALSE
chr12	69237053	A	G	0.00331	MDM2	+	TRUE
chr2	128602462	T	C	0.00298		.	FALSE	AluSq2	SINE,Alu
chr1	26450101	A	G	0.00764	PDIK1L	+	FALSE
chr19	13054924	A	C	0.00982	CALR	+	FALSE
chr2	20648145	A	C	3.92667E-06	RHOB	+	FALSE
chr10	63829539	C	T	0.00918	ARID5B	+	FALSE
chr1	7827697	G	C	0.00760	CAMTA1	+	FALSE
chr1	16929327	C	T	0.00315	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	36068278	T	C	0.00068	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	67874697	T	C	0.00163	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr3	141879810	T	C	0.00784	GK5	-	FALSE	AluJr	SINE,Alu
chr1	120164994	C	T	0.00829	ZNF697	-	FALSE
chr1	117945049	G	A	0.00030	MAN1A2	+	FALSE
chr1	36642420	T	C	0.00162	MAP7D1	+	FALSE
chrX	71492446	A	T	0.00281		.	FALSE
chr8	124027562	C	T	0.00674	DERL1	-	FALSE
chr1	28661576	A	G	0.00021	MED18	+	TRUE	AluSg	SINE,Alu
chr1	1458255	T	G	0.00438	ATAD3A	+	FALSE
chr1	118502685	T	A	0.00333	WDR3,SPAG17	+,-	FALSE
chr1	148010973	C	T	0.00045	NBPF8	-	FALSE
chr1	35646125	C	T	0.00027	SFPQ	-	FALSE
chr1	94351064	A	T	0.00212	GCLM	-	FALSE
chr1	214524576	T	C	0.00408	PTPN14	-	TRUE	AluSg	SINE,Alu
chr4	57327017	A	G	4.29594E-07	PAICS	+	TRUE	AluSx1	SINE,Alu
chr19	19791270	A	G	0.00732	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr1	10521172	T	C	1.01590E-06	DFFA	-	TRUE	AluY	SINE,Alu
chr4	10076959	C	G	6.37978E-10	WDR1	-	FALSE
chr1	228675570	G	C	0.00298	RNF187	+	FALSE
chr1	144596317	C	T	0.00020	NBPF20	+	FALSE	AluJb	SINE,Alu
chr3	45721836	A	G	0.00310	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	120612163	C	A	0.00566	NOTCH2	-	FALSE
chr5	56177849	C	G	0.00921	MAP3K1	+	FALSE	(CAA)n	SINE,Alu
chr1	200375837	T	G	0.00429	ZNF281	-	FALSE	(T)n	SINE,Alu
chr3	57913810	G	A	0.00477	SLMAP	+	FALSE
chr1	24798068	C	A	0.00686	NIPAL3	+	FALSE	AluJr	SINE,Alu
chr12	120898661	A	G	2.17580E-05	GATC	+	TRUE	AluY	SINE,Alu
chr1	9161231	T	C	0.00481		.	FALSE	AluSx	SINE,Alu
chr1	19665557	A	C	0.00365	CAPZB	-	FALSE
chr2	105964472	C	T	0.00398	C2orf49	+	FALSE	(TTTCTCC)n	SINE,Alu
chr5	148382005	C	A	8.42472E-06	SH3TC2	-	FALSE
chr1	148751869	A	G	0.00011		.	FALSE
chr1	33150598	T	C	4.12722E-05	SYNC,RBBP4	+,-	FALSE
chr3	9829171	G	A	0.00730	TADA3	-	FALSE
chr5	6491892	G	A	0.00707	UBE2QL1	+	FALSE
chr1	28785729	G	A	0.00181	PHACTR4	+	FALSE
chr1	36068231	T	C	0.00022	PSMB2	-	TRUE	AluSc	SINE,Alu
chr15	83659311	C	T	0.00858	FAM103A1,C15orf40	+,-	FALSE
chr1	16910172	G	A	0.00085	NBPF1	-	FALSE
chr3	196044973	C	T	0.00985	TCTEX1D2,TM4SF19-TCTEX1D2	-	FALSE
chr1	1595388	A	G	0.00135	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr11	8708789	A	G	0.00237	RPL27A	+	TRUE	AluSp	SINE,Alu
chr1	225974581	A	G	0.00732	SRP9	+	TRUE	AluJr	SINE,Alu
chr1	85278156	C	T	0.00663		.	FALSE	AluSz6	SINE,Alu
chr1	66838733	A	C	0.00086	PDE4B	+	FALSE
chr1	46077268	A	G	0.00484	NASP	+	TRUE	AluSc8	SINE,Alu
chr2	178406765	T	A	0.00325	AGPS	+	FALSE
chr2	204082516	G	A	0.00094	NBEAL1	+	FALSE
chr1	46076533	A	G	0.00832	NASP	+	TRUE	AluSx	SINE,Alu
chr3	45721874	A	G	0.00314	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr9	140174976	G	T	0.00045	TOR4A	+	FALSE
chr8	41798912	T	C	0.00892	KAT6A	-	FALSE
chr1	145369007	T	G	0.00703	NBPF20,NBPF10	+	FALSE
chr19	19792345	A	G	0.00272	ZNF101	+	TRUE	AluJb	SINE,Alu
chr1	16889639	T	C	0.00350	NBPF1	-	TRUE
chr1	160967854	T	C	0.00150	F11R	-	TRUE	AluSp	SINE,Alu
chr1	87572817	C	T	0.00514	HS2ST1	+	FALSE
chr1	144932151	G	T	0.00294	NBPF20,PDE4DIP	+,-	FALSE
chr7	22983600	T	C	0.00025	FAM126A	-	FALSE
chr2	37330435	T	C	3.14905E-06		.	FALSE	AluSq2	SINE,Alu
chr10	51374391	C	G	0.00028	TIMM23B	+	FALSE
chr2	208620129	A	G	0.00167	CCNYL1	+	TRUE	EutTc1-N1	SINE,Alu
chr1	19542250	T	C	0.00780	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr4	17803537	T	C	0.00366	DCAF16	-	TRUE	AluY	SINE,Alu
chr3	88104073	G	C	0.00887	CGGBP1	-	FALSE
chr1	148595665	A	G	0.00062	NBPF15	+	TRUE	L1MC4	SINE,Alu
chr4	2940165	T	C	0.00201	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr15	64657530	T	C	0.00580	KIAA0101	-	TRUE	FLAM_C	SINE,Alu
chr1	27992624	G	A	0.00813	IFI6	-	FALSE
chr2	128950548	A	G	0.00589	UGGT1	+	TRUE	AluSc	SINE,Alu
chr1	46075604	A	G	0.00365	NASP	+	TRUE	AluSx4	SINE,Alu
chr20	25428646	A	G	9.98122E-05	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	16892274	A	T	0.00371	NBPF1	-	FALSE
chr19	58357211	A	G	0.00041	ZNF587B	+	TRUE	AluSx3	SINE,Alu
chr1	145689843	A	G	4.95254E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	32372358	C	T	0.00303	PTP4A2	-	FALSE	(CA)n	SINE,Alu
chr1	220239448	T	C	0.00157	RNU5F-1,BPNT1	+,-	FALSE
chr1	40213628	A	G	0.00058	PPIE	+	TRUE	FRAM	SINE,Alu
chr3	73025345	A	G	0.00219		.	FALSE	AluSz	SINE,Alu
chr1	28825433	A	G	0.00019	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr3	100083425	G	A	0.00717	TOMM70	-	FALSE	FAM	SINE,Alu
chr1	29519665	T	C	0.00680	MECR	-	TRUE	AluJb	SINE,Alu
chrX	73421601	T	C	0.00219	FTX	-	TRUE	L1MB7	SINE,Alu
chr3	43098969	T	G	0.00596	FAM198A	+	FALSE	L1ME3G	SINE,Alu
chr1	2303108	T	C	5.78895E-05	MORN1	-	FALSE	AluSp	SINE,Alu
chr4	40138676	A	G	0.00157	N4BP2	+	FALSE
chr8	124262075	G	T	7.79989E-05	ZHX1-C8orf76,ZHX1	-	FALSE
chr15	90375419	T	C	0.00521	C15orf38-AP3S2,AP3S2	-	TRUE	AluJr	SINE,Alu
chr14	52906081	T	G	0.00602	TXNDC16	-	FALSE
chr3	48787674	T	C	0.00240	PRKAR2A	-	TRUE	AluSp	SINE,Alu
chr6	42849616	A	G	0.00092	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	1595048	T	C	0.00646	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr3	45721934	A	G	0.00011	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr2	9770610	A	G	0.00486	YWHAQ	-	FALSE
chr3	196556141	G	A	0.00534	PAK2	+	FALSE
chr9	139100154	C	G	0.00464	QSOX2	-	FALSE
chr2	101622884	C	A	0.00387	RPL31	+	FALSE
chr2	206983267	T	C	0.00133		.	FALSE	AluJb	SINE,Alu
chr1	214524496	T	C	0.00879	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	10519982	T	C	3.22355E-05		.	FALSE	AluJr	SINE,Alu
chr1	90493918	G	A	0.00166	ZNF326	+	FALSE
chr12	53435277	G	T	2.75857E-05	EIF4B	+	FALSE
chr1	241792562	A	G	0.00800	OPN3,CHML	-	FALSE
chr1	19199221	C	T	0.00392	ALDH4A1	-	FALSE
chr19	11256697	T	C	0.00039	SPC24	-	TRUE	AluJr4	SINE,Alu
chr10	61548857	C	A	0.00046	CCDC6	-	FALSE
chr1	109535120	G	A	6.51608E-07	WDR47	-	FALSE
chr1	46828460	C	T	0.00393	NSUN4	+	FALSE
chr12	98942820	A	G	0.00568	TMPO	+	TRUE	AluSc	SINE,Alu
chr15	45775144	T	C	0.00867	SLC30A4	-	TRUE	AluJr	SINE,Alu
chr15	65442602	T	C	8.94083E-05	CLPX	-	TRUE	AluSg4	SINE,Alu
chr3	172115590	A	G	0.00355	FNDC3B	+	FALSE
chr6	43747964	G	A	0.00542	VEGFA	+	FALSE
chr1	15904318	C	T	9.04121E-06	AGMAT	-	FALSE
chr19	58375195	A	G	0.00080	ZNF587	+	TRUE	AluSx4	SINE,Alu
chr16	18794286	C	T	0.00633	RPS15A	-	FALSE
chr1	109780743	C	A	0.00643	SARS	+	FALSE
chr1	19232017	T	G	0.00519	IFFO2	-	FALSE
chr1	16909220	T	C	0.00029	NBPF1	-	FALSE
chr1	36386884	C	T	0.00375	AGO1	+	FALSE
chr14	21929044	T	C	3.48024E-06	RAB2B	-	TRUE	AluSp	SINE,Alu
chr1	205737665	G	T	0.00078	RAB29	-	FALSE	AluSq2	SINE,Alu
chr1	138356	C	A	0.00199	LOC729737	-	FALSE
chr3	150261569	T	G	0.00173	SERP1	-	FALSE
chr9	136209397	G	C	0.00709	MED22	-	FALSE
chr1	144607387	G	C	0.00016	NBPF20	+	FALSE
chr3	73115786	T	C	3.88619E-05	PPP4R2	+	FALSE
chr9	132575828	A	T	0.00445	TOR1A	-	FALSE
chr1	200827638	A	G	0.00665	CAMSAP2	+	FALSE
chr1	10368093	C	A	0.00131	KIF1B	+	FALSE
chr7	129472356	C	T	0.00279	UBE2H	-	FALSE
chr1	145512059	A	G	0.00053	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr3	42826041	T	G	5.78537E-12	HIGD1A	-	FALSE
chr8	146200325	T	C	0.00599	ZNF252P	-	TRUE	AluSc	SINE,Alu
chr14	50361170	C	T	0.00096	ARF6	+	FALSE	(T)n	SINE,Alu
chr8	11666384	C	T	0.00029	FDFT1	+	FALSE
chr1	19565338	C	T	0.00631	LOC101927895,EMC1	+,-	FALSE
chr1	160112392	G	A	0.00701	ATP1A2	+	FALSE	AluSx3	SINE,Alu
chr1	53288870	A	G	0.00122	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	217366192	T	A	0.00067		.	FALSE
chr2	152132130	A	G	0.00071	NMI	-	FALSE
chr3	15114317	T	C	0.00113	RBSN	-	TRUE	AluY	SINE,Alu
chr18	61565062	C	G	0.00207	SERPINB2	+	FALSE
chr1	36068276	T	C	0.00225	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	23409538	G	A	0.00464	KDM1A	+	FALSE
chr13	99056476	A	T	0.00535	FARP1	+	FALSE
chr1	8931947	T	C	0.00059	ENO1	-	FALSE
chr1	109967950	T	A	0.00096	PSMA5	-	FALSE
chr1	46159809	T	A	0.00761	TMEM69	+	FALSE
chr9	137330713	T	G	0.00021	RXRA	+	FALSE
chr2	216300795	C	G	0.00641		.	FALSE
chr1	10041432	A	G	0.00132	NMNAT1	+	TRUE	AluYj4	SINE,Alu
chr1	146400122	C	G	0.00190	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr2	10933249	C	T	0.00889	PDIA6	-	FALSE
chr1	87213175	A	T	0.00082	SH3GLB1	+	FALSE
chr1	67874859	T	C	1.49998E-05	SERBP1	-	TRUE	AluSx	SINE,Alu
chr2	174090630	C	A	0.00025	ZAK,MLK7-AS1	+,-	FALSE
chr2	37331750	T	C	1.79348E-08		.	FALSE	AluJb	SINE,Alu
chr1	16933638	G	A	4.07227E-05	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr12	98942695	A	G	0.00204	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	203709034	A	G	0.00049	ATP2B4	+	FALSE
chr1	53250625	T	C	0.00178	ZYG11B	+	FALSE
chr1	87379498	T	G	0.00784	SEP15	-	FALSE
chr1	24134721	T	C	0.00448	HMGCL	-	FALSE
chr1	27732103	C	T	0.00786	WASF2	-	FALSE
chr1	10517672	T	C	0.00257		.	FALSE	AluSx1	SINE,Alu
chr2	206987629	T	C	0.00491		.	FALSE	AluJb	SINE,Alu
chr2	209113192	G	A	0.00610	IDH1	-	FALSE
chr1	20826781	C	T	0.00110	MUL1	-	FALSE
chr4	139088295	C	T	0.00537	SLC7A11-AS1,SLC7A11	+,-	FALSE
chr3	183901281	G	A	4.84515E-09	AP2M1	+	FALSE
chr1	1459332	G	A	1.33172E-08	ATAD3A	+	FALSE
chr1	24861704	G	A	0.00345	RCAN3	+	FALSE
chr3	172350135	A	T	9.93187E-07	NCEH1	-	FALSE
chr1	27202844	T	C	0.00146		.	FALSE	AluSq2	SINE,Alu
chr15	90819619	A	G	5.14004E-06		.	FALSE	AluSx	SINE,Alu
chr5	137891109	C	G	0.00031	HSPA9	-	FALSE
chr2	223807974	A	T	0.00593	ACSL3	+	FALSE
chr3	107763040	G	A	1.74111E-05	CD47	-	FALSE
chr2	198339559	G	T	0.00712	COQ10B	+	FALSE
chr5	81571875	A	T	0.00072	RPS23	-	FALSE
chr1	53291434	A	G	0.00124	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	16891333	C	T	0.00281	NBPF1	-	FALSE
chr1	6283296	T	C	0.00122	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	196660052	G	A	0.00200	SENP5	+	FALSE	AluSz	SINE,Alu
chr9	36216895	T	C	0.00130	GNE	-	TRUE	AluY	SINE,Alu
chr9	131872852	G	C	0.00064	CRAT	-	FALSE
chr1	52381350	T	G	4.39398E-08	RAB3B	-	FALSE
chr1	26144435	C	G	0.00129	SEPN1	+	FALSE
chr1	93826611	C	G	0.00072	DR1	+	FALSE
chr5	43700242	A	G	0.00932	NNT	+	FALSE
chr1	89447856	A	G	0.00465	KYAT3,RBMXL1	-	FALSE
chr1	145509570	A	G	0.00028	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	1252510	T	C	1.62601E-05	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr1	229586611	T	C	0.00794	NUP133	-	TRUE	AluSz	SINE,Alu
chr1	67874696	T	C	0.00245	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	10043416	G	A	0.00052	NMNAT1	+	FALSE	AluSx3	SINE,Alu
chr1	9162348	T	C	0.00359		.	FALSE	AluSx	SINE,Alu
chr1	204393480	T	A	0.00783	PIK3C2B	-	FALSE
chr1	118409491	A	T	0.00471	GDAP2	-	FALSE	(A)n	SINE,Alu
chr3	42266346	A	G	0.00824	TRAK1	+	FALSE
chr3	42826041	T	G	0.00019	HIGD1A	-	FALSE
chr1	31532379	A	G	0.00061	PUM1	-	FALSE
chr14	75202857	A	G	2.23354E-05	FCF1	+	TRUE	AluSx	SINE,Alu
chr14	90871942	C	A	0.00057	CALM1	+	FALSE
chr1	161488401	T	A	0.00622	FCGR2A	+	FALSE
chr1	10520984	G	T	0.00305	DFFA	-	FALSE	AluY	SINE,Alu
chr1	1595500	T	C	0.00482	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr2	239355561	A	G	0.00343	ASB1	+	FALSE
chr1	16893691	C	A	0.00141	NBPF1	-	FALSE
chr1	110049203	G	C	0.00209		.	FALSE
chr5	149829076	G	C	0.00288	RPS14	-	FALSE
chr1	10366487	T	G	0.00187	KIF1B	+	FALSE
chr17	27586605	G	A	0.00053	NUFIP2	-	FALSE
chr1	26901090	C	T	0.00952	RPS6KA1	+	FALSE
chr1	33145989	A	T	0.00548	SYNC,RBBP4	+,-	FALSE
chr1	1650801	T	C	0.00827	CDK11B,CDK11A	-	FALSE
chr3	179117242	T	C	0.00011	GNB4	-	TRUE	AluSz	SINE,Alu
chr18	60998527	C	G	0.00078	KDSR	-	FALSE	(AGAGAGAC)n	SINE,Alu
chr12	98943103	A	G	3.95351E-06	TMPO	+	TRUE	AluSz	SINE,Alu
chr19	42375624	A	G	0.00049		.	FALSE	AluSx	SINE,Alu
chr11	8709315	A	G	0.00307	RPL27A	+	TRUE	AluYk2	SINE,Alu
chr1	31905886	C	A	0.00226	SERINC2	+	FALSE
chr3	121351277	A	T	0.00388	HCLS1	-	FALSE
chr9	115447531	T	C	0.00164	INIP	-	TRUE	AluJb	SINE,Alu
chr2	37328082	T	C	1.18454E-08		.	FALSE
chr2	197184321	C	T	0.00923	HECW2	-	FALSE
chr1	36067821	T	C	1.12344E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr5	125961648	A	G	0.00031	PHAX	+	FALSE	AluSz6	SINE,Alu
chr2	191069434	G	A	0.00680	HIBCH	-	FALSE
chr1	2326812	A	G	0.00709	RER1	+	FALSE
chr1	179044216	A	G	0.00277	FAM20B	+	TRUE	AluSx	SINE,Alu
chr6	12120445	A	G	0.00037	HIVEP1	+	FALSE
chr1	154128831	G	T	0.00183	TPM3	-	FALSE
chr1	93603188	A	G	0.00374	MTF2	+	FALSE
chr2	37328013	T	C	0.00765		.	FALSE
chr22	18571431	A	G	0.00158	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	16939857	C	T	0.00542	NBPF1	-	FALSE
chr1	28825827	A	G	0.00097	PHACTR4	+	TRUE	AluSp	SINE,Alu
chr1	16722111	C	T	0.00453	SZRD1	+	FALSE	(TTTT)n	SINE,Alu
chr1	10043504	A	G	0.00213	NMNAT1	+	FALSE	AluSx3	SINE,Alu
chr3	122283294	G	C	0.00066	DTX3L,PARP9	+,-	FALSE
chr4	17804279	G	A	0.00606	DCAF16	-	FALSE	(A)n	SINE,Alu
chr10	22824828	A	T	0.00225	PIP4K2A	-	FALSE
chr1	17345245	C	T	0.00812	SDHB	-	FALSE
chr11	67765170	G	T	0.00185	UNC93B1	-	FALSE
chr1	9162243	T	C	0.00031		.	FALSE	AluSx	SINE,Alu
chr1	148003749	T	C	0.00050	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr3	42591046	C	A	0.00933	SEC22C	-	FALSE
chr1	231154918	G	T	0.00022	FAM89A	-	FALSE	(T)n	SINE,Alu
chr2	3597974	T	C	1.93309E-05	RNASEH1	-	FALSE
chr2	39010088	A	G	0.00192		.	FALSE	AluSp	SINE,Alu
chr1	144053567	C	T	0.00353		.	FALSE
chr4	6675519	A	C	0.00064	LOC105374366	-	FALSE
chr1	148023637	C	T	0.00014	NBPF8	-	FALSE
chr4	10447986	T	A	0.00077	ZNF518B	-	FALSE
chr1	16254872	C	A	1.11022E-16	SPEN	+	FALSE
chr1	200375418	C	T	0.00425	ZNF281	-	FALSE
chr3	48485381	T	C	0.00103	TMA7	+	FALSE
chr3	48787052	T	C	0.00866	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr11	8707397	T	A	0.00046	RPL27A	+	FALSE
chr9	131872857	C	G	0.00151	CRAT	-	FALSE
chr2	207943789	G	T	0.00118	KLF7	-	FALSE	(TTTTGT)n	SINE,Alu
chr1	10517313	T	C	0.00015		.	FALSE	AluJr	SINE,Alu
chr2	86252025	T	C	3.86923E-05	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr12	125512173	A	G	0.00285		.	FALSE	AluSx1	SINE,Alu
chr1	38279666	C	T	0.00521	MTF1	-	FALSE	(T)n	SINE,Alu
chr6	57034845	G	A	0.00581	ZNF451,LOC101927211	+,-	FALSE
chr1	44447004	G	A	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr2	109401285	G	A	0.00087	RANBP2	+	FALSE
chr2	73460316	G	T	0.00368	PRADC1	-	FALSE	(CGGCGC)n	SINE,Alu
chr1	32953214	A	G	0.00837	ZBTB8B	+	TRUE	AluSz	SINE,Alu
chr1	36024788	C	T	5.60663E-14	NCDN	+	FALSE
chr3	185826764	C	T	0.00364	ETV5	-	FALSE
chr2	65496187	G	A	0.00266	ACTR2	+	FALSE
chr4	9998493	A	G	5.94150E-05	SLC2A9	-	FALSE
chr1	118167515	C	T	3.85037E-05	FAM46C	+	FALSE
chr1	28835934	A	G	0.00069	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	45976722	G	T	0.00292	MMACHC,PRDX1	+,-	FALSE
chr5	34908535	T	C	0.00054	RAD1	-	FALSE	AluSp	SINE,Alu
chr5	180663940	A	G	0.00331	RACK1	-	FALSE
chr1	79356178	C	A	0.00678	ADGRL4	-	FALSE
chr20	25427756	A	G	0.00396	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	43916642	T	C	0.00748	SZT2	+	FALSE	MIR3	SINE,Alu
chr2	55516941	C	T	0.00110	CCDC88A	-	FALSE
chr1	225974592	T	G	2.09928E-05	SRP9	+	FALSE	AluJr	SINE,Alu
chr2	113513825	T	C	2.13681E-05	CKAP2L	-	FALSE
chr1	3730332	T	C	0.00025	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	33145959	T	G	0.00755	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr19	53914418	A	G	0.00891	ZNF765	+	TRUE	AluSx	SINE,Alu
chr1	20976759	C	T	2.31016E-05	PINK1,PINK1-AS	+,-	FALSE
chr1	146650916	C	T	0.00025	PDIA3P1	+	FALSE
chr20	25428587	A	G	0.00018	GINS1	+	TRUE	AluJb	SINE,Alu
chr1	28836975	A	G	0.00202	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	10520487	T	C	0.00559		.	FALSE	AluSx1	SINE,Alu
chr7	100064719	A	G	0.00276	TSC22D4	-	FALSE
chr1	10042987	A	G	0.00261	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr15	85184830	T	C	0.00895	WDR73,SCAND2P	+,-	FALSE	AluSz	SINE,Alu
chr9	96438975	T	C	0.00042	PHF2	+	FALSE	(CTCCAC)n	SINE,Alu
chr1	160967833	T	C	0.00717	F11R	-	TRUE	AluSp	SINE,Alu
chr2	128063697	G	A	0.00775	MAP3K2	-	FALSE
chr11	65179817	T	C	0.00599	FRMD8	+	FALSE
chr2	37327670	T	C	5.08697E-08		.	FALSE
chr16	75479467	T	C	0.00160	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	33148635	A	G	5.17667E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	16934178	C	T	0.00382	NBPF1	-	FALSE
chr1	22109370	G	A	0.00371	USP48	-	FALSE
chr2	161130868	A	C	0.00297	RBMS1	-	FALSE
chr1	100490275	A	G	0.00748	SLC35A3	+	TRUE	AluSc5	SINE,Alu
chr1	27204865	T	C	0.00042		.	FALSE	AluSx	SINE,Alu
chr1	19542239	T	C	0.00038	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	95658346	T	A	0.00961	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	24128467	C	T	0.00481	HMGCL	-	FALSE
chr6	33172015	T	C	5.04816E-05		.	FALSE
chr1	20977748	T	G	0.00474	PINK1,PINK1-AS	+,-	FALSE
chr4	95588274	G	A	0.00095	PDLIM5	+	FALSE
chr7	2290637	C	T	0.00956	NUDT1	+	FALSE
chr1	28825337	A	G	0.00167	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr1	10517613	T	C	0.00375		.	FALSE	AluSx1	SINE,Alu
chr12	92537721	A	T	0.00057	BTG1	-	FALSE
chr1	32706126	G	A	0.00932	MTMR9LP	-	FALSE
chr1	52816622	T	C	6.23198E-05	CC2D1B	-	TRUE	AluSx1	SINE,Alu
chr7	44047240	G	A	0.00588	POLR2J4,SPDYE1	+,-	FALSE
chr1	145313405	C	T	0.00322	NBPF20,NBPF10	+	FALSE
chr2	24223142	A	G	0.00524	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr4	17803616	T	C	4.59289E-05	DCAF16	-	TRUE	AluY	SINE,Alu
chr22	18571343	A	G	0.00501	PEX26	+	TRUE	AluSz	SINE,Alu
chr1	19542464	T	C	0.00736	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr15	63616883	A	T	0.00036	CA12	-	FALSE
chr1	33149508	A	G	0.00107	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	37958451	C	G	0.00882	MEAF6	-	FALSE	MER5B	SINE,Alu
chr19	23926877	A	T	0.00896	ZNF681	-	FALSE
chr2	85554792	C	A	0.00634	TGOLN2	-	FALSE
chr3	17201882	C	T	0.00259	TBC1D5	-	FALSE
chr8	17796338	G	T	4.50000E-10	PCM1	+	FALSE
chr10	126677250	G	T	0.00762	CTBP2	-	FALSE
chr1	146627405	C	G	0.00074	PRKAB2	-	FALSE
chr1	145323656	A	T	0.00593	NBPF20,NBPF10	+	FALSE
chr1	16889050	A	C	0.00669	NBPF1	-	FALSE
chr5	122359499	C	A	0.00304	PPIC	-	FALSE	(AC)n	SINE,Alu
chr1	27533879	G	A	0.00877		.	FALSE
chr1	19586532	A	G	0.00769	MRTO4	+	TRUE	AluSz	SINE,Alu
chr2	37331116	T	C	0.00286		.	FALSE	AluSx1	SINE,Alu
chr2	206987738	T	C	0.00859		.	FALSE	AluJb	SINE,Alu
chr12	56736075	C	T	0.00262	STAT2	-	FALSE	AluSp	SINE,Alu
chr13	50273970	C	T	1.77946E-05	KPNA3	-	FALSE
chr1	113243096	G	T	0.00114	MOV10	+	FALSE
chr1	23636275	G	T	0.00185	HNRNPR	-	FALSE
chr2	207027628	A	G	2.96026E-05	EEF1B2	+	FALSE
chr7	156764350	G	C	0.00415	NOM1	+	FALSE
chr15	41590943	A	G	0.00561	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr6	109785887	T	C	7.14632E-06	MICAL1,ZBTB24	-	TRUE	AluJr	SINE,Alu
chr1	168169452	G	A	0.00600	TIPRL	+	FALSE
chr3	141668758	T	C	2.84489E-05	TFDP2	-	TRUE	AluSz	SINE,Alu
chr5	7885959	A	G	0.00628	MTRR	+	FALSE
chr11	68523504	T	C	0.00029	CPT1A	-	TRUE	AluSq	SINE,Alu
chr5	149763305	A	G	0.00640	TCOF1	+	FALSE

RBP	SMNDC1
Knock-Method	shRNA
RBP Family	SMN
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR408SDL
Platform	HiSeq
Pubmed ID	32252787

SMNDC1 - Target Gene Network