RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	149459341	A	G	0.00042	COMMD2	-	FALSE
chr15	49283066	T	G	0.00065	SECISBP2L	-	FALSE
chr17	73940094	T	C	0.00557	ACOX1	-	TRUE	AluJb	SINE,Alu
chr9	125887703	A	C	0.00067	STRBP	-	FALSE
chr1	67518534	C	T	0.00682	SLC35D1	-	FALSE
chr1	9162932	A	T	0.00635		.	FALSE
chr8	12880246	A	G	0.00012	KIAA1456	+	TRUE	AluJo	SINE,Alu
chr2	39212565	T	G	0.00662	SOS1	-	FALSE
chr3	19992432	G	T	0.00017	RAB5A	+	FALSE
chr22	18572730	A	G	6.64824E-05	PEX26	+	TRUE	AluYf1	SINE,Alu
chr3	5026729	C	T	0.00539	BHLHE40	+	FALSE
chr9	132266624	A	G	5.52448E-06	LINC00963	+	TRUE	AluSx	SINE,Alu
chr1	145688664	A	T	0.00087	NBPF20,NBPF10,RNF115	+	FALSE
chr4	57326879	A	G	0.00198	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	145689611	C	A	0.00104	NBPF20,NBPF10	+	FALSE	AluSg	SINE,Alu
chr4	177249593	T	G	0.00038	SPCS3	+	FALSE	(T)n	SINE,Alu
chr1	95658358	T	C	0.00633	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr1	79003523	C	G	0.00036	PTGFR	+	FALSE
chrM	8859	G	A	0.00929		.	FALSE
chr6	13788045	T	C	0.00157	MCUR1	-	TRUE
chr1	45975345	A	G	0.00120	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	10517276	T	C	0.00079		.	FALSE	AluJr	SINE,Alu
chr3	5258985	T	C	1.48069E-09	EDEM1	+	FALSE
chr1	201846630	C	A	0.00212	IPO9	+	FALSE	(CA)n	SINE,Alu
chr1	151778899	T	C	0.00475	RORC	-	FALSE
chr1	65692498	T	C	0.00356	AK4	+	FALSE	(T)n	SINE,Alu
chr10	65382718	G	A	0.00984	REEP3	+	FALSE	AluSc	SINE,Alu
chr1	9642827	G	A	0.00985	SLC25A33	+	FALSE
chr1	10517512	T	C	0.00646		.	FALSE	AluSx1	SINE,Alu
chr1	61922501	A	C	0.00231	NFIA	+	FALSE	A-rich	SINE,Alu
chr7	35737649	G	A	0.00566	LOC101930085	+	FALSE	AluSz	SINE,Alu
chr2	128063526	C	A	0.00759	MAP3K2	-	FALSE
chr7	29962665	C	T	0.00059	SCRN1	-	FALSE
chr2	74332839	A	G	4.77205E-06	TET3	+	FALSE
chr5	177576463	A	T	0.00554		.	FALSE
chr1	47141718	T	C	0.00978	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr1	147091972	C	T	8.17896E-06	BCL9	+	FALSE
chr1	168220489	A	G	0.00525		.	FALSE	AluSz6	SINE,Alu
chr20	29631604	G	A	0.00045	FRG1BP	+	FALSE
chr12	133298019	A	G	2.77684E-05	PGAM5	+	TRUE	AluJo	SINE,Alu
chr3	45960560	T	A	0.00201	FYCO1	-	FALSE
chr1	33219771	G	C	0.00256	KIAA1522	+	FALSE
chr1	12040479	T	C	0.00505	MFN2	+	FALSE
chr1	11084103	T	A	0.00146	TARDBP	+	FALSE
chr1	36068295	T	C	2.11660E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	10517538	T	C	0.00840		.	FALSE	AluSx1	SINE,Alu
chr1	53289686	A	G	0.00222	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	53365235	G	C	0.00029	ECHDC2	-	FALSE
chr3	14986080	T	C	4.44089E-16	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr2	174090338	A	C	0.00250	ZAK,MLK7-AS1	+,-	FALSE	AluSx	SINE,Alu
chr1	46165408	T	C	0.00106	IPP	-	TRUE	FRAM	SINE,Alu
chr1	10042955	A	G	0.00131	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	19542269	T	C	0.00744	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	52838798	T	C	0.00069	ORC1	-	TRUE	AluJb	SINE,Alu
chr2	99812464	A	G	0.00998	MRPL30	+	TRUE	AluSx	SINE,Alu
chr7	152342999	T	C	0.00313		.	FALSE	FRAM	SINE,Alu
chr1	53288897	A	G	0.00160	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	99812446	A	G	0.00461	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	206635246	A	T	0.00283	SRGAP2	+	FALSE	(AC)n	SINE,Alu
chr1	145512951	A	G	0.00180	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	153720690	G	A	0.00550	INTS3	+	FALSE
chr8	42882287	A	G	0.00771	HOOK3	+	TRUE	AluSx1	SINE,Alu
chr1	32373437	G	A	1.22125E-14	PTP4A2	-	FALSE
chr14	23794554	G	A	0.00966	BCL2L2-PABPN1,PABPN1	+	FALSE	A-rich	SINE,Alu
chr3	119212012	A	C	0.00976	POGLUT1	+	FALSE
chr1	1650832	A	G	0.00263	CDK11B,CDK11A	-	FALSE
chr7	11148863	T	A	0.00455	PHF14	+	FALSE
chr1	145509493	A	G	0.00264	NBPF20,NBPF10,RBM8A	+	TRUE	AluJr	SINE,Alu
chr1	150704486	T	C	0.00947	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	150597527	T	C	0.00058	ENSA	-	FALSE
chr2	37327670	T	C	0.00021		.	FALSE
chr2	128950217	C	T	0.00255	UGGT1	+	FALSE
chr1	19543247	T	C	5.35430E-06	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr15	49454018	C	T	0.00053	GALK2	+	FALSE	AluSx1	SINE,Alu
chr1	1650797	A	G	0.00798	CDK11B,CDK11A	-	FALSE
chr19	24104040	A	G	0.00476	ZNF726	+	TRUE	AluSg4	SINE,Alu
chr1	179044100	A	G	0.00897	FAM20B	+	TRUE	AluSx	SINE,Alu
chr8	11666384	C	T	0.00029	FDFT1	+	FALSE
chr1	205686523	G	T	2.43057E-05	NUCKS1	-	FALSE
chr4	124237063	A	G	0.00876	SPATA5	+	TRUE	AluJr	SINE,Alu
chr1	3546269	C	A	0.00260	TPRG1L	+	FALSE	AluSz	SINE,Alu
chr1	32661594	C	T	0.00725	TXLNA	+	FALSE	(T)n	SINE,Alu
chr9	33466219	A	C	0.00148	NOL6	-	FALSE
chr1	144909956	G	A	0.00310	NBPF20,PDE4DIP	+,-	FALSE
chr1	10517659	T	C	0.00010		.	FALSE	AluSx1	SINE,Alu
chr19	11256626	T	C	1.61091E-07	SPC24	-	TRUE	AluJr4	SINE,Alu
chr7	48146025	A	G	0.00106	UPP1	+	TRUE	AluSq	SINE,Alu
chr1	28858860	C	T	0.00213	RCC1	+	FALSE
chr7	20177525	T	C	0.00052	MACC1,LOC101927668	-	TRUE	AluSx	SINE,Alu
chr19	16661483	T	C	0.00824	SLC35E1	-	TRUE	AluSz	SINE,Alu
chr4	187628395	T	A	0.00000	FAT1	-	FALSE
chr3	195461650	A	G	0.00062		.	FALSE	AluSz	SINE,Alu
chr4	165998654	T	C	0.00953	TMEM192	-	TRUE	AluSg	SINE,Alu
chr19	63697	G	A	0.00742	WASH5P	-	FALSE
chr2	71376999	G	A	0.00546	MPHOSPH10	+	FALSE
chr3	15114317	T	C	0.00113	RBSN	-	TRUE	AluY	SINE,Alu
chr1	205056476	T	C	0.00096	RBBP5	-	FALSE	AluSx	SINE,Alu
chr15	90819472	A	G	0.00068		.	FALSE	AluSx	SINE,Alu
chr1	144873887	C	T	0.00088	NBPF20,PDE4DIP	+,-	FALSE
chr3	52567617	A	G	0.00025	NT5DC2	-	FALSE	G-rich	SINE,Alu
chr1	1337738	C	A	4.14710E-05	MRPL20	-	FALSE
chr2	201749994	T	C	0.00496	PPIL3	-	TRUE	AluSx	SINE,Alu
chr2	105881071	C	A	0.00851	TGFBRAP1	-	FALSE
chr1	109855150	A	C	0.00251	SORT1	-	FALSE	A-rich	SINE,Alu
chr2	206480819	C	T	0.00663	PARD3B	+	FALSE
chr1	16890130	A	C	0.00753	NBPF1	-	FALSE
chr6	24719384	A	C	0.00215	C6orf62	-	FALSE	(A)n	SINE,Alu
chr1	46075663	A	G	0.00013	NASP	+	TRUE	AluSx4	SINE,Alu
chr7	131241052	A	G	0.00663	PODXL	-	FALSE	(GGCGAC)n	SINE,Alu
chr4	57326873	A	G	0.00342	PAICS	+	TRUE	AluSx1	SINE,Alu
chr3	122293773	A	T	0.00852	DTX3L	+	FALSE
chr1	153591278	G	T	0.00119	S100A13	-	FALSE
chr1	17085028	G	A	0.00803	MST1L,LOC102724562	-	FALSE
chr1	205759960	C	T	4.24096E-05	SLC41A1	-	FALSE
chr4	17803604	T	C	0.00206	DCAF16	-	TRUE	AluY	SINE,Alu
chr2	24223142	A	G	0.00524	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr14	19686329	G	A	0.00117	DUXAP10	+	FALSE
chr1	19542458	T	C	0.00113	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	36067821	T	C	1.12344E-05	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	109049177	A	T	0.00044	DPPA4	-	FALSE	AluSp	SINE,Alu
chr2	44459528	G	A	0.00100	PPM1B	+	FALSE
chr16	75479891	T	C	9.48885E-06	TMEM170A	-	TRUE	AluSg4	SINE,Alu
chr1	9643107	A	G	0.00859		.	FALSE	AluSx	SINE,Alu
chr2	120022387	C	T	0.00728	STEAP3	+	FALSE
chr14	75202312	A	G	3.27721E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr22	39415796	A	T	0.00084		.	FALSE	MER49	SINE,Alu
chr1	11347152	A	T	0.00295	UBIAD1	+	FALSE
chr1	27662235	G	T	0.00766	TMEM222	+	FALSE
chr16	23536684	T	C	0.00012	EARS2	-	FALSE
chr3	156258319	T	C	0.00012	SSR3	-	TRUE	AluYk3	SINE,Alu
chr6	79649800	C	G	0.00864	PHIP	-	FALSE
chr1	206566195	C	T	0.00334	SRGAP2	+	FALSE
chr10	120801786	G	C	0.00752	EIF3A	-	FALSE
chr2	183643905	A	T	0.00113	DNAJC10	+	FALSE
chr3	30735330	G	T	0.00401	TGFBR2	+	FALSE
chr12	27955296	C	T	3.87648E-07	KLHL42	+	FALSE
chr9	86554217	C	T	0.00272	C9orf64	-	FALSE	AluSq2	SINE,Alu
chr2	202031356	C	T	0.00247	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr1	118068558	G	A	0.00876		.	FALSE
chr1	93307479	C	A	0.00085	FAM69A,RPL5	+,-	FALSE
chr2	229890660	A	G	0.00596	PID1	-	FALSE
chr1	167758262	C	T	0.00663	MPZL1	+	FALSE
chr17	57279167	A	G	0.00071	PRR11	+	TRUE	AluSq2	SINE,Alu
chr2	105964472	C	T	0.00398	C2orf49	+	FALSE	(TTTCTCC)n	SINE,Alu
chr1	1650787	T	C	0.00071	CDK11B,CDK11A	-	FALSE
chr2	3609064	G	A	0.00212	RNASEH1-AS1	+	FALSE	MER33	SINE,Alu
chr1	1650787	T	C	0.00590	CDK11B,CDK11A	-	FALSE
chr1	118502767	G	A	0.00624	WDR3,SPAG17	+,-	FALSE	(GT)n	SINE,Alu
chr3	15113847	T	C	0.00026	RBSN	-	TRUE	AluSz6	SINE,Alu
chr17	40466890	G	T	0.00260	STAT3	-	FALSE	AluSc8	SINE,Alu
chr1	150594611	G	T	0.00329	ENSA	-	FALSE
chr4	129795659	A	T	0.00459	JADE1	+	FALSE
chr2	37431639	T	C	0.00160	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr1	53289860	A	G	0.00346	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr12	10311410	A	G	0.00909	OLR1	-	FALSE
chr1	19232017	T	G	0.00519	IFFO2	-	FALSE
chr1	146629399	G	T	0.00611	PRKAB2	-	FALSE
chr8	12879707	T	G	0.00780	KIAA1456	+	FALSE
chr1	1622754	A	G	0.00426	CDK11B,SLC35E2B	-	FALSE	MLT1F2	SINE,Alu
chr4	1193026	A	G	0.00471	SPON2,LOC100130872	-	FALSE	AluSp	SINE,Alu
chr1	59124634	C	A	0.00322	MYSM1	-	FALSE	(AC)n	SINE,Alu
chr1	10518831	T	C	0.00213		.	FALSE	AluSx1	SINE,Alu
chr1	45241211	C	T	0.00947		.	FALSE
chr4	39551166	T	C	0.00309	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	179830012	A	C	0.00303	TOR1AIP2	-	FALSE
chr20	62572487	A	C	0.00390	UCKL1	-	FALSE
chr1	16934178	C	T	0.00382	NBPF1	-	FALSE
chr7	6501820	A	T	0.00288	KDELR2	-	FALSE
chr1	19198414	G	A	0.00028	ALDH4A1	-	FALSE
chr1	156692049	A	T	6.25184E-05	ISG20L2	-	FALSE
chr1	89447715	T	G	0.00137	KYAT3,RBMXL1	-	FALSE
chr12	133297904	A	G	8.99170E-13	PGAM5	+	TRUE	AluJo	SINE,Alu
chr1	120163007	G	A	0.00573	ZNF697	-	FALSE
chr2	42577806	T	A	0.00276	COX7A2L	-	FALSE
chr5	154194420	G	A	0.00137	LARP1	+	FALSE
chr1	569492	T	C	0.00336		.	FALSE
chr1	26755494	A	G	0.00874	LIN28A	+	TRUE	AluSc	SINE,Alu
chr3	14986137	T	C	0.00132	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr2	241825926	T	C	7.75373E-05	C2orf54	-	FALSE
chr3	10192608	A	G	0.00030	VHL	+	TRUE	AluSx1	SINE,Alu
chr7	2473753	C	T	0.00806	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr1	11346336	A	G	0.00288	UBIAD1	+	FALSE
chr2	74442548	C	T	0.00721		.	FALSE
chr4	154257511	C	A	0.00093	TRIM2	+	FALSE	(A)n	SINE,Alu
chr1	10519888	T	C	0.00666		.	FALSE	AluJr	SINE,Alu
chr1	16913677	T	C	0.00638	NBPF1	-	FALSE
chr3	99517466	G	A	0.00088	MIR548G	-	FALSE	(TG)n	SINE,Alu
chr1	39470995	A	C	0.00036	AKIRIN1	+	FALSE	AluSx1	SINE,Alu
chr2	68402154	A	T	0.00991	PNO1	+	FALSE
chr1	154317153	C	T	0.00567	ATP8B2	+	FALSE
chr3	12613866	T	C	0.00043	MKRN2	+	FALSE
chr2	97494866	C	T	0.00069	CNNM3	+	FALSE
chr1	160175191	A	C	0.00509	LOC729867,PEA15	+,-	FALSE	(GGC)n	SINE,Alu
chr3	179117663	G	C	6.59793E-05	GNB4	-	FALSE
chr5	180682608	C	A	0.00144	CTC-338M12.4	+	FALSE
chr8	11700676	T	C	0.00534	CTSB	-	TRUE	AluSg	SINE,Alu
chr1	19934793	G	A	0.00376	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr3	44790879	T	C	0.00453	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	16893822	C	T	0.00808	NBPF1	-	FALSE
chr2	68402360	A	G	0.00309	PNO1	+	FALSE
chr2	214182561	C	T	0.00703	SPAG16	+	FALSE	L1MC1	SINE,Alu
chr7	65992794	T	C	0.00820		.	FALSE	AluJr	SINE,Alu
chr5	170837892	C	A	0.00725		.	FALSE
chr4	144475142	T	A	0.00375	SMARCA5	+	FALSE
chr14	53242859	T	C	9.31997E-05	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	33149508	A	G	0.00871	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr2	46414708	G	A	0.00155	PRKCE	+	FALSE
chr1	33149495	A	G	0.00652	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr12	69237057	A	G	0.00259	MDM2	+	TRUE
chr1	204525666	A	G	0.00093	MDM4	+	TRUE	AluSz	SINE,Alu
chr1	154128839	G	T	0.00579	TPM3	-	FALSE
chr7	100957852	T	C	1.09184E-06	LOC101927746,IFT22	+,-	FALSE	MADE1	SINE,Alu
chr1	204526795	A	G	0.00199	MDM4	+	TRUE	AluSx	SINE,Alu
chr19	42376872	A	G	0.00647		.	FALSE	AluSp	SINE,Alu
chr1	93811476	G	C	0.00663		.	FALSE
chr11	64084160	C	T	0.00895	ESRRA,TRMT112	+,-	FALSE
chr1	40430967	G	T	0.00567	MFSD2A	+	FALSE
chr1	204525672	A	G	0.00375	MDM4	+	TRUE	AluSz	SINE,Alu
chr2	37429677	A	G	0.00279	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr1	145500933	C	T	0.00982	NBPF20,NBPF10,LIX1L	+	FALSE
chr20	25428587	A	G	0.00018	GINS1	+	TRUE	AluJb	SINE,Alu
chr2	190636411	C	G	0.00870	ORMDL1	-	FALSE
chr1	19282314	G	T	0.00158	IFFO2	-	FALSE
chr12	98943011	A	G	1.18352E-07	TMPO	+	TRUE	AluSz	SINE,Alu
chr2	72968438	G	T	0.00147	EXOC6B	-	FALSE
chr1	207942427	A	G	0.00822	CD46	+	TRUE	AluSg4	SINE,Alu
chr1	186390303	A	C	0.00455	C1orf27	+	FALSE	L1ME3F	SINE,Alu
chr5	56177845	A	T	0.00420	MAP3K1	+	FALSE
chr2	201774185	T	C	0.00932		.	FALSE	AluSz	SINE,Alu
chr1	230416412	C	G	0.00514	GALNT2	+	FALSE
chr2	32535873	A	G	0.00270		.	FALSE	AluJb	SINE,Alu
chr1	8938808	C	A	0.00030	ENO1	-	FALSE
chr1	144598755	G	A	0.00044	NBPF20	+	FALSE
chr10	89623865	A	C	0.00348	PTEN	+	FALSE
chr1	46076599	A	G	0.00116	NASP	+	TRUE	AluSx	SINE,Alu
chr5	179020622	T	C	2.11448E-05	RUFY1	+	FALSE
chr1	144815953	A	G	0.00348	NBPF20,NBPF9	+	FALSE
chr2	37330606	T	C	0.00136		.	FALSE	AluSq2	SINE,Alu
chr1	54355105	A	G	0.00398	YIPF1	-	FALSE	MIRb	SINE,Alu
chr1	9160982	T	C	0.00350		.	FALSE	AluJb	SINE,Alu
chr14	103372464	C	A	0.00577	TRAF3	+	FALSE	(AC)n	SINE,Alu
chr2	48025764	C	T	0.00810	MSH6	+	FALSE
chr3	47554503	T	G	0.00720	ELP6	-	FALSE	AluSx	SINE,Alu
chr1	53684924	A	G	0.00347	C1orf123	-	FALSE	L1MA5A	SINE,Alu
chr1	53289688	A	G	5.35400E-06	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	153782011	C	T	0.00913	GATAD2B	-	FALSE
chr1	160967848	T	C	0.00200	F11R	-	TRUE	AluSp	SINE,Alu
chr2	99812289	A	G	0.00040	MRPL30	+	TRUE	AluSx	SINE,Alu
chr3	141164940	C	A	0.00194	ZBTB38	+	FALSE
chr1	179042687	A	G	0.00163	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr8	30536016	T	C	2.97001E-06	GSR	-	TRUE	AluJr	SINE,Alu
chr15	41597669	A	G	0.00087		.	FALSE	AluSz6	SINE,Alu
chr1	1152631	C	A	0.00517	SDF4	-	FALSE
chr1	9161245	T	C	0.00071		.	FALSE	AluSx	SINE,Alu
chr2	192555801	C	A	0.00628	LOC105747689	+	FALSE
chr1	36024788	C	T	2.88658E-15	NCDN	+	FALSE
chr9	125609943	A	G	0.00247		.	FALSE
chr1	10520487	T	C	0.00710		.	FALSE	AluSx1	SINE,Alu
chr1	6283348	T	C	0.00247	ICMT	-	TRUE	AluSx3	SINE,Alu
chr7	64435684	T	G	0.00239	ZNF117	-	FALSE
chr1	16890176	A	C	0.00753	NBPF1	-	FALSE
chr1	59142713	T	C	0.00246	MYSM1	-	FALSE
chr8	30536544	T	C	5.33169E-07	GSR	-	TRUE	AluSp	SINE,Alu
chr2	197004439	A	G	0.00034	STK17B	-	FALSE
chr2	10580506	A	T	0.00294	ODC1	-	FALSE
chr1	74672474	G	A	0.00292	FPGT-TNNI3K,FPGT	+	FALSE	X12_DNA	SINE,Alu
chr4	139088295	C	T	0.00537	SLC7A11-AS1,SLC7A11	+,-	FALSE
chr1	9160989	T	C	0.00041		.	FALSE	AluJb	SINE,Alu
chr1	1571802	G	A	0.00067	CDK11B	-	FALSE
chr5	37291386	T	C	1.33550E-08		.	FALSE	AluSx3	SINE,Alu
chr1	24128467	C	T	0.00481	HMGCL	-	FALSE
chr2	99812843	A	G	0.00966	MRPL30	+	TRUE	AluJb	SINE,Alu
chr14	75202402	A	G	0.00141	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	173009536	T	A	0.00519		.	FALSE
chr2	37329331	T	C	0.00343		.	FALSE	AluJr4	SINE,Alu
chr1	10177553	C	G	0.00474	UBE4B	+	FALSE
chr5	151041888	T	G	0.00636	SPARC	-	FALSE
chr1	70904800	G	T	0.00020	CTH	+	FALSE
chr3	181431106	C	G	0.00542	SOX2-OT,SOX2	+	FALSE
chr1	204524846	A	G	0.00940	MDM4	+	TRUE	AluSx	SINE,Alu
chr3	45721874	A	G	0.00296	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	144851999	A	C	0.00385	NBPF20,PDE4DIP	+,-	FALSE
chr2	8996323	G	A	0.00159	MBOAT2	-	FALSE
chr1	150703860	T	C	0.00222	CTSS	-	TRUE	AluSx	SINE,Alu
chr2	3609064	G	A	0.00614	RNASEH1-AS1	+	FALSE	MER33	SINE,Alu
chr1	89447839	C	G	0.00589	KYAT3,RBMXL1	-	FALSE
chr8	94935937	T	C	0.00338	PDP1	+	FALSE
chr4	57327017	A	G	4.29594E-07	PAICS	+	TRUE	AluSx1	SINE,Alu
chr1	19586458	A	G	0.00029	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	12628188	T	C	3.43513E-08	DHRS3	-	FALSE
chr1	32661578	C	T	0.00623	TXLNA	+	FALSE	(T)n	SINE,Alu
chr12	51324122	A	G	0.00226	METTL7A	+	TRUE	AluSq2	SINE,Alu
chr1	10519888	T	C	0.00218		.	FALSE	AluJr	SINE,Alu
chr1	19543247	T	C	4.83051E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	93297590	C	A	0.00325		.	FALSE
chr1	11083183	G	T	0.00342	TARDBP	+	FALSE
chr2	33812352	A	G	0.00223	FAM98A	-	FALSE
chr12	19671149	C	T	0.00315	AEBP2	+	FALSE
chr1	67874270	G	A	0.00019	SERBP1	-	FALSE
chr4	185309400	T	A	0.00250	IRF2	-	FALSE	(GGGAT)n	SINE,Alu
chr1	93617406	A	T	0.00275	TMED5	-	FALSE
chr3	10192825	A	G	0.00042	VHL	+	TRUE	AluSx1	SINE,Alu
chr3	176739158	C	A	0.00612	TBL1XR1	-	FALSE
chr2	32539582	A	G	0.00419		.	FALSE	AluSp	SINE,Alu
chr1	222906426	T	C	0.00322	BROX	+	FALSE	AluSx	SINE,Alu
chr1	10517653	T	C	0.00228		.	FALSE	AluSx1	SINE,Alu
chr17	65335430	T	C	0.00019	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	33150598	T	C	4.12722E-05	SYNC,RBBP4	+,-	FALSE
chr1	3730332	T	C	9.76659E-06	CEP104	-	TRUE	AluSx3	SINE,Alu
chr1	28662186	A	G	8.22643E-05	MED18	+	TRUE	AluSq2	SINE,Alu
chr16	56510334	T	C	0.00494	OGFOD1	+	FALSE
chr14	75202704	A	G	2.33511E-06	FCF1	+	TRUE	AluSc	SINE,Alu
chr2	101893244	C	A	0.00332	RNF149	-	FALSE	(A)n	SINE,Alu
chr10	75009592	T	C	1.74317E-07	DNAJC9-AS1,MRPS16	+,-	FALSE	AluSc	SINE,Alu
chr20	18469054	T	C	0.00522	RBBP9	-	TRUE	AluJr	SINE,Alu
chr1	16952896	G	A	2.20079E-06	CROCCP2	-	FALSE
chr3	14986098	T	C	0.00996	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr1	9815354	T	G	0.00212	CLSTN1	-	FALSE
chr5	122359499	C	A	0.00304	PPIC	-	FALSE	(AC)n	SINE,Alu
chr4	183721749	G	A	0.00324	TENM3	+	FALSE
chr14	103941379	C	A	0.00705	MARK3	+	FALSE
chr1	65901227	A	T	0.00914	LEPR,LEPROT	+	FALSE	AluYh3	SINE,Alu
chr20	36147563	T	C	0.00313	BLCAP	-	TRUE
chr2	239970718	C	A	0.00244	HDAC4	-	FALSE	(AAAAC)n	SINE,Alu
chr17	40176809	A	T	0.00860	NKIRAS2	+	FALSE	AluSz	SINE,Alu
chr1	33148706	A	G	0.00038	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	327407	A	G	3.55459E-07		.	FALSE
chr2	37329347	T	C	0.00155		.	FALSE	AluJr4	SINE,Alu
chr1	40229368	A	G	0.00209	BMP8B,PPIE	+,-	FALSE
chr19	3121451	C	T	0.00567	GNA11	+	FALSE
chr1	227071525	C	T	0.00013	PSEN2	+	FALSE
chr4	39550977	T	C	3.35724E-05	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr3	99463810	G	T	0.00496	MIR548G,COL8A1	+,-	FALSE
chr1	6585331	T	C	0.00094	NOL9	-	TRUE	FAM	SINE,Alu
chr2	62095565	A	T	0.00355	CCT4	-	FALSE
chr19	58375157	A	G	0.00408	ZNF587	+	TRUE	AluSx4	SINE,Alu
chr1	1597423	C	T	2.12697E-10	CDK11B,SLC35E2B	-	FALSE
chr3	15113656	T	C	1.73787E-06	RBSN	-	TRUE	AluSz6	SINE,Alu
chr14	23795204	G	T	0.00938	BCL2L2-PABPN1,PABPN1	+	FALSE
chr1	145513017	A	G	3.59549E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	85718132	C	A	0.00738	C1orf52	-	FALSE
chr3	44791569	T	C	0.00685	KIAA1143	-	TRUE	AluJr	SINE,Alu
chr1	147124310	T	G	0.00968	ACP6	-	FALSE
chr8	12052756	T	C	0.00984		.	FALSE
chr7	65992665	T	C	2.17687E-05		.	FALSE	AluJr	SINE,Alu
chr1	42693597	A	G	0.00106	FOXJ3	-	FALSE
chr11	76835290	C	T	0.00011	CAPN5	+	FALSE
chr3	141668922	T	C	0.00937	TFDP2	-	TRUE	AluSz	SINE,Alu
chr1	26603883	G	A	0.00088	CEP85	+	FALSE
chr4	42022464	C	A	0.00059	SLC30A9	+	FALSE
chr1	38155698	G	T	0.00368	C1orf109	-	FALSE	AluSx1	SINE,Alu
chr4	101946461	G	T	0.00442	PPP3CA	-	FALSE	(T)n	SINE,Alu
chr1	10520725	T	C	0.00795	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	36068295	T	C	0.00076	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	91990450	A	T	0.00091	CDC7	+	FALSE	LFSINE_Vert	SINE,Alu
chr1	11084103	T	A	0.00118	TARDBP	+	FALSE
chr1	52253793	C	T	0.00966	OSBPL9	+	FALSE

RBP	FIP1L1
Knock-Method	shRNA
RBP Family	Fip1
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR511BNY
Platform	HiSeq
Pubmed ID	32252787

FIP1L1 - Target Gene Network