| RBP | PTBP1 |
| Knock-Method | shRNA |
| RBP Family | RRM_5 |
| Biosample Name | K562 |
| Tissue Type | Haematopoietic_and_lymphoid_tissue |
| Biosample Type | Cell line |
| # of Control | 2 |
| # of Treat | 2 |
| Species | Human |
| Data Source | ENCODE |
| Profile ID | ENCSR239BCO |
| Platform | HiSeq |
| Pubmed ID | 32252787 |
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| RBP | LongES_LongEE_ShortES_ShortEE_FlankingES_FlankingEE | pValue | △Inc | Dataset ID | Sashimi plot |
|---|
| Chrom | Site | Ref_allele | Alt_allele | Pvalue | Genename | Strand | KnownRNAediting | RepeatName | RepeatFamily |
|---|---|---|---|---|---|---|---|---|---|
| chr1 | 160967855 | T | C | 0.00042 | F11R | - | TRUE | AluSp | SINE,Alu |
| chr1 | 35648712 | G | A | 0.00298 | SFPQ | - | FALSE | ||
| chr1 | 16133912 | T | C | 0.00126 | UQCRHL | - | TRUE | ||
| chr6 | 108364582 | T | C | 0.00577 | OSTM1 | - | FALSE | ||
| chr9 | 136335345 | G | A | 0.00490 | CACFD1 | + | FALSE | (TG)n | SINE,Alu |
| chr1 | 28826118 | A | G | 0.00039 | PHACTR4 | + | TRUE | AluJb | SINE,Alu |
| chr3 | 100428460 | G | C | 5.60949E-08 | TFG | + | FALSE | ||
| chr2 | 180810264 | A | T | 1.24157E-05 | CWC22 | - | FALSE | ||
| chr1 | 142449 | G | A | 0.00073 | . | FALSE | MIRb | SINE,Alu | |
| chr3 | 42252924 | G | C | 0.00079 | TRAK1 | + | FALSE | ||
| chr2 | 99813003 | A | G | 0.00226 | MRPL30 | + | TRUE | AluJb | SINE,Alu |
| chr19 | 53999034 | A | G | 0.00282 | . | FALSE | AluSq2 | SINE,Alu | |
| chr1 | 65330637 | C | T | 0.00047 | JAK1 | - | FALSE | ||
| chr1 | 47716046 | A | T | 0.00696 | STIL | - | FALSE | ||
| chr1 | 12164538 | G | A | 8.95385E-07 | TNFRSF8 | + | FALSE | ||
| chr1 | 93298516 | A | G | 0.00493 | FAM69A,RPL5 | +,- | FALSE | ||
| chr1 | 153720690 | G | A | 0.00550 | INTS3 | + | FALSE | ||
| chr3 | 88104159 | A | C | 0.00279 | CGGBP1 | - | FALSE | ||
| chr12 | 102517753 | T | C | 0.00022 | PARPBP | + | FALSE | ||
| chr1 | 142619487 | A | G | 0.00511 | . | FALSE | |||
| chr1 | 110136321 | T | A | 0.00721 | GNAI3 | + | FALSE | ||
| chr9 | 102744711 | A | T | 0.00675 | ERP44 | - | FALSE | ||
| chr1 | 33148216 | A | G | 0.00321 | SYNC,RBBP4 | +,- | FALSE | AluSg | SINE,Alu |
| chr16 | 29454768 | A | G | 0.00564 | SMG1P6,BOLA2-SMG1P6 | - | FALSE | ||
| chr5 | 40830064 | T | C | 0.00554 | . | FALSE | AluSp | SINE,Alu | |
| chr12 | 125514122 | A | G | 1.22592E-05 | . | FALSE | (TA)n | SINE,Alu | |
| chr1 | 6583593 | T | C | 0.00088 | NOL9 | - | TRUE | AluSq | SINE,Alu |
| chr3 | 20025677 | G | T | 0.00116 | RAB5A,PP2D1 | +,- | FALSE | ||
| chr1 | 116609185 | G | A | 0.00187 | SLC22A15 | + | FALSE | ||
| chr3 | 48787042 | T | C | 0.00799 | PRKAR2A | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 36067886 | T | C | 0.00786 | PSMB2 | - | TRUE | AluSz | SINE,Alu |
| chr4 | 17803537 | T | C | 0.00366 | DCAF16 | - | TRUE | AluY | SINE,Alu |
| chr1 | 65898873 | G | C | 0.00530 | LEPR,LEPROT | + | FALSE | ||
| chr1 | 33149496 | A | G | 0.00308 | SYNC,RBBP4 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr4 | 67846 | C | A | 0.00573 | ZNF718,ZNF595 | + | FALSE | AluYk3 | SINE,Alu |
| chr1 | 39470978 | T | A | 0.00378 | AKIRIN1 | + | FALSE | AluSx1 | SINE,Alu |
| chr1 | 23631625 | A | G | 0.00536 | HNRNPR | - | FALSE | UCON44 | SINE,Alu |
| chr4 | 2940085 | T | C | 0.00801 | NOP14-AS1,NOP14 | +,- | FALSE | AluSp | SINE,Alu |
| chr2 | 191184475 | A | G | 0.00895 | HIBCH | - | FALSE | ||
| chr2 | 9630247 | T | G | 0.00638 | ADAM17 | - | FALSE | ||
| chr3 | 196662641 | T | C | 0.00089 | NCBP2 | - | FALSE | ||
| chr1 | 156044222 | G | T | 0.00037 | MEX3A | - | FALSE | (T)n | SINE,Alu |
| chr8 | 30535975 | T | C | 5.05710E-05 | GSR | - | TRUE | AluJr | SINE,Alu |
| chr17 | 57279167 | A | G | 0.00071 | PRR11 | + | TRUE | AluSq2 | SINE,Alu |
| chr1 | 24798498 | C | T | 0.00131 | NIPAL3 | + | FALSE | ||
| chr1 | 45244419 | T | A | 0.00027 | . | FALSE | |||
| chr2 | 39050141 | A | C | 0.00924 | DHX57 | - | FALSE | ||
| chr9 | 115447528 | T | C | 0.00112 | INIP | - | TRUE | AluJb | SINE,Alu |
| chr1 | 10520076 | T | C | 0.00763 | . | FALSE | AluSx | SINE,Alu | |
| chr10 | 120795222 | A | T | 0.00193 | EIF3A | - | FALSE | ||
| chr16 | 24807247 | G | A | 0.00417 | TNRC6A | + | FALSE | ||
| chr2 | 236957822 | G | A | 0.00929 | AGAP1 | + | FALSE | ||
| chr1 | 19586519 | A | G | 0.00310 | MRTO4 | + | TRUE | AluSz | SINE,Alu |
| chr11 | 31452788 | A | G | 0.00239 | DNAJC24 | + | TRUE | AluSx1 | SINE,Alu |
| chr3 | 14239845 | G | A | 0.00375 | LSM3 | + | FALSE | ||
| chr6 | 33281842 | G | T | 0.00514 | . | FALSE | |||
| chr3 | 45721874 | A | G | 0.00314 | LIMD1,LIMD1-AS1 | +,- | FALSE | AluJb | SINE,Alu |
| chr1 | 228880021 | C | T | 4.50271E-05 | RHOU | + | FALSE | ||
| chr4 | 7765042 | C | T | 0.00903 | AFAP1,AFAP1-AS1 | +,- | FALSE | ||
| chr12 | 56510709 | G | A | 0.00047 | RPL41 | + | FALSE | ||
| chr3 | 156258319 | T | C | 0.00909 | SSR3 | - | TRUE | AluYk3 | SINE,Alu |
| chr3 | 183861750 | A | C | 1.09807E-05 | EIF2B5 | + | FALSE | ||
| chr3 | 73115390 | C | T | 0.00462 | PPP4R2 | + | FALSE | (AT)n | SINE,Alu |
| chr1 | 28825370 | A | G | 0.00617 | PHACTR4 | + | TRUE | AluSg | SINE,Alu |
| chr1 | 214524566 | T | C | 0.00040 | PTPN14 | - | TRUE | AluSg | SINE,Alu |
| chr19 | 11257644 | T | C | 0.00991 | SPC24 | - | TRUE | AluSp | SINE,Alu |
| chr1 | 15899345 | T | C | 0.00300 | AGMAT | - | TRUE | AluSx3 | SINE,Alu |
| chr6 | 99319240 | T | A | 0.00842 | . | FALSE | Cheshire | SINE,Alu | |
| chr5 | 68850922 | G | C | 0.00323 | OCLN | + | FALSE | AluSx4 | SINE,Alu |
| chr5 | 125961468 | A | G | 2.27854E-07 | PHAX | + | TRUE | AluSz6 | SINE,Alu |
| chr3 | 155660961 | A | G | 6.62819E-05 | . | FALSE | AluSz | SINE,Alu | |
| chr1 | 16912014 | A | C | 0.00702 | NBPF1 | - | FALSE | ||
| chr2 | 37329238 | T | C | 0.00249 | . | FALSE | AluJr4 | SINE,Alu | |
| chr2 | 192699639 | A | G | 0.00017 | SDPR | - | FALSE | ||
| chr1 | 114438951 | A | G | 0.00017 | AP4B1-AS1,AP4B1 | +,- | FALSE | ||
| chr1 | 1668943 | A | C | 0.00640 | SLC35E2 | - | FALSE | ||
| chr2 | 74332837 | G | T | 4.72839E-05 | TET3 | + | FALSE | ||
| chr2 | 64687665 | C | A | 0.00976 | LGALSL | + | FALSE | ||
| chr1 | 27182750 | G | C | 0.00141 | . | FALSE | |||
| chr1 | 161929879 | A | T | 0.00680 | ATF6 | + | FALSE | ||
| chr1 | 54691921 | G | A | 0.00010 | SSBP3 | - | FALSE | ||
| chr9 | 33624856 | C | T | 0.00823 | ANXA2P2 | + | FALSE | ||
| chr2 | 27001973 | C | T | 0.00327 | SLC35F6 | + | FALSE | AluSx | SINE,Alu |
| chr1 | 178447798 | T | C | 2.92578E-05 | RASAL2 | + | FALSE | ||
| chr1 | 53366673 | A | G | 0.00243 | ECHDC2 | - | FALSE | AluJb | SINE,Alu |
| chr2 | 198368113 | T | A | 1.78788E-05 | HSPE1,HSPE1-MOB4 | + | FALSE | ||
| chr1 | 145688664 | A | T | 0.00087 | NBPF20,NBPF10,RNF115 | + | FALSE | ||
| chr6 | 42856330 | A | G | 2.22045E-16 | RPL7L1 | + | TRUE | ||
| chr4 | 2940358 | G | A | 2.85215E-10 | NOP14-AS1,NOP14 | +,- | FALSE | AluJo | SINE,Alu |
| chr1 | 67874696 | T | C | 0.00014 | SERBP1 | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 109816293 | G | C | 0.00759 | CELSR2 | + | FALSE | ||
| chr1 | 120166681 | G | A | 0.00241 | ZNF697 | - | FALSE | ||
| chr1 | 220231959 | T | C | 0.00464 | RNU5F-1,BPNT1 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 40307166 | G | A | 0.00026 | TRIT1 | - | FALSE | ||
| chr11 | 126147713 | C | G | 0.00384 | FOXRED1 | + | FALSE | ||
| chr3 | 98541116 | G | A | 1.05300E-07 | DCBLD2 | - | FALSE | ||
| chr2 | 242173247 | G | A | 0.00345 | HDLBP | - | FALSE | ||
| chr1 | 200375418 | C | T | 0.00425 | ZNF281 | - | FALSE | ||
| chr1 | 28835934 | A | G | 0.00069 | SNHG3,RCC1 | + | TRUE | AluSx4 | SINE,Alu |
| chr11 | 65404868 | T | G | 0.00022 | PCNX3 | + | FALSE | ||
| chr1 | 11780004 | G | T | 0.00216 | DRAXIN | + | FALSE | ||
| chr1 | 45976112 | A | G | 1.14998E-06 | MMACHC | + | TRUE | AluJr | SINE,Alu |
| chr1 | 1684347 | C | T | 0.00550 | NADK | - | FALSE | ||
| chr7 | 128144035 | A | G | 0.00054 | . | FALSE | AluSq2 | SINE,Alu | |
| chr4 | 39550977 | T | C | 0.00987 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 148556753 | G | A | 0.00472 | . | FALSE | |||
| chr3 | 14985983 | A | T | 6.81677E-14 | FGD5-AS1 | - | FALSE | ||
| chr1 | 45976261 | T | A | 0.00018 | MMACHC | + | FALSE | ||
| chr1 | 201846630 | C | A | 0.00212 | IPO9 | + | FALSE | (CA)n | SINE,Alu |
| chr16 | 10623571 | T | C | 0.00329 | EMP2 | - | TRUE | AluSp | SINE,Alu |
| chr1 | 154128831 | G | T | 0.00183 | TPM3 | - | FALSE | ||
| chr1 | 114443458 | A | G | 0.00320 | AP4B1-AS1,AP4B1 | +,- | FALSE | AluSp | SINE,Alu |
| chr17 | 43002237 | C | A | 0.00141 | KIF18B | - | FALSE | ||
| chr2 | 24223291 | A | G | 0.00512 | UBXN2A | + | TRUE | AluSc | SINE,Alu |
| chr2 | 37327702 | T | C | 0.00119 | . | FALSE | |||
| chr17 | 421931 | T | C | 0.00260 | VPS53 | - | TRUE | AluSx | SINE,Alu |
| chr1 | 16889502 | T | C | 5.54778E-06 | NBPF1 | - | TRUE | L1MC4 | SINE,Alu |
| chr1 | 156044222 | G | T | 0.00758 | MEX3A | - | FALSE | (T)n | SINE,Alu |
| chr1 | 94995653 | A | C | 0.00035 | F3 | - | FALSE | AluSx | SINE,Alu |
| chr1 | 62628531 | A | G | 0.00716 | PATJ | + | TRUE | AluSg4 | SINE,Alu |
| chr1 | 158067059 | A | C | 0.00655 | KIRREL | + | FALSE | ||
| chr1 | 246831356 | G | A | 0.00616 | CNST | + | FALSE | ||
| chr1 | 145273345 | T | C | 0.00133 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr3 | 53220215 | G | A | 2.78975E-05 | PRKCD | + | FALSE | ||
| chr7 | 120740103 | G | T | 0.00601 | CPED1 | + | FALSE | ||
| chr1 | 16895634 | T | G | 0.00472 | NBPF1 | - | FALSE | ||
| chr8 | 11666384 | C | T | 0.00029 | FDFT1 | + | FALSE | ||
| chr2 | 37431604 | A | G | 0.00876 | CEBPZOS,CEBPZ | +,- | FALSE | AluSc | SINE,Alu |
| chr1 | 22853141 | G | A | 0.00060 | ZBTB40 | + | FALSE | ||
| chr1 | 245006499 | C | G | 0.00171 | COX20 | + | FALSE | ||
| chr1 | 20976032 | T | C | 0.00010 | PINK1,PINK1-AS | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 40539208 | A | T | 2.90582E-07 | PPT1 | - | FALSE | ||
| chr6 | 109784327 | T | C | 2.38076E-05 | MICAL1,ZBTB24 | - | TRUE | AluSg | SINE,Alu |
| chr1 | 145281633 | C | A | 0.00510 | NBPF20,NOTCH2NL | + | FALSE | ||
| chr1 | 949608 | G | A | 0.00416 | ISG15 | + | FALSE | ||
| chr9 | 89626839 | T | G | 0.00016 | LOC440173 | - | FALSE | ||
| chr4 | 36121336 | T | G | 0.00183 | ARAP2 | - | FALSE | ||
| chr8 | 143413136 | C | T | 0.00267 | TSNARE1 | - | FALSE | ||
| chr1 | 28662254 | A | G | 0.00052 | MED18 | + | TRUE | AluSq2 | SINE,Alu |
| chr5 | 43527402 | T | C | 0.00539 | PAIP1 | - | FALSE | ||
| chr1 | 214529170 | T | C | 0.00670 | PTPN14 | - | TRUE | ||
| chr4 | 66439707 | T | C | 0.00148 | EPHA5 | - | FALSE | ||
| chr6 | 33377511 | T | C | 5.31992E-06 | . | FALSE | (TG)n | SINE,Alu | |
| chr2 | 153483048 | G | A | 0.00740 | FMNL2 | + | FALSE | ||
| chr1 | 52381350 | T | G | 4.39398E-08 | RAB3B | - | FALSE | ||
| chr1 | 10521200 | T | C | 0.00096 | DFFA | - | TRUE | AluY | SINE,Alu |
| chr3 | 195694448 | C | T | 0.00025 | SDHAP1 | - | FALSE | ||
| chr1 | 206635245 | T | C | 0.00238 | SRGAP2 | + | FALSE | ||
| chr2 | 37327669 | T | C | 0.00566 | . | FALSE | |||
| chr1 | 28825337 | A | G | 0.00838 | PHACTR4 | + | TRUE | AluSg | SINE,Alu |
| chr2 | 135208354 | A | T | 0.00249 | MGAT5 | + | FALSE | ||
| chr1 | 179044181 | A | G | 0.00083 | FAM20B | + | TRUE | AluSx | SINE,Alu |
| chr2 | 152334323 | A | G | 0.00504 | . | FALSE | AluSq | SINE,Alu | |
| chr1 | 75175797 | G | A | 0.00203 | CRYZ | - | FALSE | ||
| chr1 | 92865902 | A | G | 0.00040 | . | FALSE | AluJr | SINE,Alu | |
| chr1 | 93298756 | T | C | 0.00264 | FAM69A,RPL5 | +,- | FALSE | MER5C | SINE,Alu |
| chr2 | 37333924 | T | C | 0.00298 | EIF2AK2 | - | FALSE | AluSz | SINE,Alu |
| chr4 | 17802819 | T | C | 0.00112 | DCAF16 | - | TRUE | AluSz | SINE,Alu |
| chr17 | 29578724 | C | T | 0.00514 | NF1 | + | FALSE | ||
| chr1 | 11084345 | C | T | 0.00558 | TARDBP | + | FALSE | ||
| chr1 | 204521590 | A | G | 1.33621E-05 | MDM4 | + | TRUE | AluSg | SINE,Alu |
| chr18 | 24127008 | T | G | 0.00800 | KCTD1 | - | FALSE | (TGG)n | SINE,Alu |
| chr2 | 206987597 | T | C | 0.00085 | . | FALSE | AluJb | SINE,Alu | |
| chr1 | 179044174 | A | G | 0.00410 | FAM20B | + | TRUE | AluSx | SINE,Alu |
| chr2 | 39664278 | C | A | 0.00053 | MAP4K3 | - | FALSE | (CGC)n | SINE,Alu |
| chr1 | 95658346 | T | A | 0.00098 | TMEM56-RWDD3,LOC101928118,TMEM56 | +,- | FALSE | ||
| chr1 | 10517689 | T | C | 0.00504 | . | FALSE | AluSx1 | SINE,Alu | |
| chr1 | 1017747 | A | G | 0.00142 | C1orf159 | - | FALSE | ||
| chr5 | 478174 | C | T | 0.00392 | SLC9A3,LOC100288152 | +,- | FALSE | ||
| chr1 | 117117182 | C | T | 0.00270 | IGSF3 | - | FALSE | ||
| chr4 | 39552174 | T | C | 0.00026 | UGDH-AS1,SMIM14 | +,- | FALSE | AluSx | SINE,Alu |
| chr3 | 30733403 | A | T | 0.00110 | TGFBR2 | + | FALSE | (TA)n | SINE,Alu |
| chr7 | 64435684 | T | G | 0.00239 | ZNF117 | - | FALSE | ||
| chr1 | 86049389 | T | A | 0.00420 | CYR61 | + | FALSE | ||
| chrM | 9988 | T | C | 0.00011 | . | FALSE | |||
| chr5 | 134061334 | A | G | 0.00721 | SEC24A | + | FALSE | ||
| chr4 | 17629937 | G | A | 0.00795 | . | FALSE | MER90 | SINE,Alu | |
| chr6 | 31322980 | C | T | 0.00091 | . | FALSE | |||
| chr5 | 290174 | C | T | 0.00083 | PDCD6 | + | FALSE | ||
| chr4 | 153545691 | T | C | 0.00671 | . | FALSE | AluJb | SINE,Alu | |
| chr3 | 32524229 | G | T | 0.00359 | CMTM6 | - | FALSE | ||
| chr3 | 48787640 | T | C | 0.00463 | PRKAR2A | - | TRUE | AluSp | SINE,Alu |
| chr3 | 196660344 | T | A | 0.00022 | SENP5 | + | FALSE | ||
| chr1 | 15909744 | C | T | 0.00225 | AGMAT | - | FALSE | ||
| chr10 | 75008841 | T | C | 0.00088 | DNAJC9-AS1,MRPS16 | +,- | FALSE | AluJr | SINE,Alu |
| chr4 | 57326873 | A | G | 0.00034 | PAICS | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 10520378 | T | C | 0.00743 | . | FALSE | AluSx1 | SINE,Alu | |
| chr3 | 42826041 | T | G | 0.00019 | HIGD1A | - | FALSE | ||
| chr17 | 57279323 | A | G | 0.00159 | PRR11 | + | TRUE | AluSq2 | SINE,Alu |
| chr5 | 125961648 | A | G | 0.00031 | PHAX | + | FALSE | AluSz6 | SINE,Alu |
| chr1 | 9643106 | A | G | 0.00088 | . | FALSE | AluSx | SINE,Alu | |
| chr1 | 19543459 | T | C | 0.00540 | LOC101927895,EMC1 | +,- | FALSE | AluJb | SINE,Alu |
| chr19 | 8005999 | T | C | 0.00027 | TIMM44 | - | FALSE | ||
| chr14 | 53242674 | T | C | 1.74446E-05 | GNPNAT1 | - | TRUE | AluJr | SINE,Alu |
| chr2 | 37230734 | C | T | 0.00025 | HEATR5B | - | FALSE | ||
| chr1 | 17313654 | C | T | 0.00886 | ATP13A2 | - | FALSE | ||
| chr1 | 110564996 | C | T | 0.00926 | AHCYL1 | + | FALSE | ||
| chr2 | 9629953 | C | A | 0.00105 | ADAM17 | - | FALSE | ||
| chr1 | 28564195 | T | C | 0.00113 | ATPIF1 | + | FALSE | ||
| chr3 | 169808354 | G | A | 0.00015 | PHC3 | - | FALSE | ||
| chr1 | 201846627 | A | T | 0.00571 | IPO9 | + | FALSE | (CA)n | SINE,Alu |
| chr7 | 6442892 | C | A | 0.00675 | RAC1 | + | FALSE | ||
| chr17 | 49042381 | T | C | 0.00931 | SPAG9 | - | TRUE | AluJb | SINE,Alu |
| chr7 | 128169979 | T | G | 0.00569 | . | FALSE | |||
| chr10 | 16554732 | T | A | 0.00706 | PTER | + | FALSE | ||
| chr1 | 16891340 | T | A | 0.00440 | NBPF1 | - | FALSE | ||
| chr4 | 129795661 | A | T | 0.00165 | JADE1 | + | FALSE | ||
| chr12 | 9848629 | A | G | 0.00027 | CLEC2D | + | FALSE | ||
| chr2 | 3622912 | G | T | 0.00000 | RPS7 | + | FALSE | ||
| chr3 | 10192709 | C | T | 0.00082 | VHL | + | FALSE | AluSx1 | SINE,Alu |
| chr2 | 61413040 | T | A | 0.00675 | AHSA2 | + | FALSE | (ATTTTAT)n | SINE,Alu |
| chr3 | 156259317 | T | C | 0.00189 | SSR3 | - | TRUE | AluSq2 | SINE,Alu |
| chr14 | 75202287 | T | C | 0.00757 | FCF1 | + | FALSE | AluSc | SINE,Alu |
| chr2 | 85133793 | G | A | 0.00577 | TMSB10 | + | FALSE | ||
| chr5 | 130537933 | A | G | 0.00084 | LYRM7 | + | TRUE | AluSp | SINE,Alu |
| chr2 | 232576431 | T | C | 0.00593 | PTMA | + | FALSE | ||
| chr6 | 42857058 | A | G | 3.29248E-05 | RPL7L1 | + | TRUE | AluSp | SINE,Alu |
| chr6 | 71298815 | T | A | 0.00287 | . | FALSE | |||
| chr1 | 10517314 | T | C | 0.00288 | . | FALSE | AluJr | SINE,Alu | |
| chr12 | 12967264 | C | G | 0.00781 | DDX47 | + | FALSE | ||
| chr3 | 14986447 | T | C | 2.03372E-08 | FGD5-AS1 | - | TRUE | AluSq2 | SINE,Alu |
| chr1 | 46075663 | A | G | 0.00061 | NASP | + | TRUE | AluSx4 | SINE,Alu |
| chr3 | 48787052 | T | C | 0.00866 | PRKAR2A | - | TRUE | AluSx3 | SINE,Alu |
| chr1 | 33148367 | C | G | 0.00439 | SYNC,RBBP4 | +,- | FALSE | AluSg | SINE,Alu |
| chr1 | 160967817 | T | C | 0.00478 | F11R | - | TRUE | AluSp | SINE,Alu |
| chr2 | 128952075 | A | G | 0.00919 | UGGT1 | + | TRUE | AluSx1 | SINE,Alu |
| chr1 | 95660026 | G | T | 0.00129 | TMEM56-RWDD3,LOC101928118,TMEM56 | +,- | FALSE | ||
| chr1 | 10521162 | T | C | 0.00911 | DFFA | - | TRUE | AluY | SINE,Alu |
| chr1 | 145511797 | T | G | 0.00894 | NBPF20,NBPF10,RBM8A,GNRHR2 | +,- | FALSE | (T)n | SINE,Alu |
| chr4 | 10443059 | A | T | 0.00187 | ZNF518B | - | FALSE | ||
| chr5 | 52389817 | T | A | 0.00868 | ITGA2 | + | FALSE | ||
| chr7 | 116147752 | A | G | 0.00031 | CAV2 | + | FALSE | (AAAAGAAA)n | SINE,Alu |
| chr1 | 53289892 | A | G | 0.00178 | ZYG11B | + | TRUE | FRAM | SINE,Alu |
| chr12 | 125511958 | A | G | 0.00494 | THRIL | - | FALSE | AluSx1 | SINE,Alu |
| chr12 | 125269475 | T | C | 0.00184 | SCARB1 | - | FALSE | ||
| chr1 | 231377081 | C | T | 6.17358E-06 | GNPAT | + | FALSE | ||
| chr1 | 148561089 | T | C | 0.00975 | NBPF15 | + | FALSE | ||
| chr2 | 74333234 | T | C | 0.00270 | TET3 | + | FALSE | ||
| chr1 | 54692674 | A | G | 0.00864 | SSBP3 | - | FALSE | ||
| chr7 | 44917320 | T | C | 0.00082 | PURB | - | TRUE | AluSz | SINE,Alu |
| chr1 | 56961756 | A | G | 0.00265 | PLPP3 | - | FALSE | ||
| chr3 | 41281388 | T | G | 0.00720 | CTNNB1 | + | FALSE | ||
| chr14 | 23300642 | C | A | 0.00266 | MRPL52 | + | FALSE | MIRb | SINE,Alu |
| chr13 | 99056476 | A | T | 0.00535 | FARP1 | + | FALSE | ||
| chr2 | 39009427 | A | G | 1.04745E-05 | . | FALSE | AluSx3 | SINE,Alu | |
| chr9 | 96438974 | C | G | 0.00083 | PHF2 | + | FALSE | (CTCCAC)n | SINE,Alu |
| chr1 | 47746678 | G | C | 0.00328 | STIL | - | FALSE | ||
| chr4 | 56295160 | T | A | 0.00187 | CLOCK | - | FALSE | (T)n | SINE,Alu |
| chr16 | 88763958 | G | A | 7.55606E-05 | RNF166 | - | FALSE | ||
| chr1 | 36690599 | A | G | 0.00406 | THRAP3 | + | FALSE | ||
| chr1 | 179312752 | C | T | 0.00106 | SOAT1 | + | FALSE | ||
| chr1 | 20975992 | T | C | 0.00027 | PINK1,PINK1-AS | +,- | FALSE | AluSz | SINE,Alu |
| chr1 | 61922437 | G | T | 0.00359 | NFIA | + | FALSE | ||
| chr12 | 12618715 | T | C | 0.00714 | BORCS5 | + | FALSE | ||
| chr3 | 98518155 | A | T | 0.00777 | DCBLD2 | - | FALSE | ||
| chr14 | 21929014 | T | C | 0.00749 | RAB2B | - | TRUE | AluSp | SINE,Alu |
| chr1 | 9161218 | T | C | 0.00641 | . | FALSE | AluSx | SINE,Alu | |
| chr16 | 4810507 | G | A | 0.00021 | ZNF500 | - | FALSE | ||
| chr16 | 23478710 | C | A | 0.00335 | GGA2 | - | FALSE | (AC)n | SINE,Alu |
| chr1 | 53680205 | C | T | 9.80404E-07 | C1orf123 | - | FALSE | ||
| chr8 | 56985608 | A | T | 0.00077 | RPS20 | - | FALSE | ||
| chr1 | 31905886 | C | A | 0.00702 | SERINC2 | + | FALSE | ||
| chr4 | 5743512 | T | C | 0.00045 | EVC | + | FALSE | ||
| chr12 | 133298275 | A | G | 4.13546E-09 | PGAM5 | + | TRUE | AluSp | SINE,Alu |
| chr1 | 33149502 | A | G | 0.00045 | SYNC,RBBP4 | +,- | FALSE | AluSx1 | SINE,Alu |
| chr4 | 36121334 | C | G | 0.00057 | ARAP2 | - | FALSE | ||
| chr1 | 10517306 | T | C | 0.00176 | . | FALSE | AluJr | SINE,Alu | |
| chr5 | 53841240 | A | G | 0.00416 | SNX18 | + | FALSE | ||
| chr1 | 6282301 | T | C | 0.00480 | ICMT | - | TRUE | AluSz | SINE,Alu |
| chr3 | 11596302 | T | C | 0.00110 | ATG7 | + | FALSE | ||
| chr1 | 28662205 | C | T | 0.00010 | MED18 | + | FALSE | AluSq2 | SINE,Alu |
| chrX | 2825075 | T | C | 0.00410 | ARSD | - | TRUE | AluSx1 | SINE,Alu |
| chr4 | 1205667 | A | C | 0.00990 | CTBP1-AS,CTBP1 | +,- | FALSE | (A)n | SINE,Alu |
| chr1 | 31426815 | A | G | 0.00797 | PUM1 | - | FALSE | ||
| chr17 | 41144251 | T | G | 0.00014 | RUNDC1 | + | FALSE | ||
| chr1 | 789187 | C | G | 5.07459E-05 | LINC01128 | + | FALSE | ||
| chr1 | 207942427 | A | G | 0.00822 | CD46 | + | TRUE | AluSg4 | SINE,Alu |