RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	67874849	T	C	0.00169	SERBP1	-	TRUE	AluSx	SINE,Alu
chr2	176789423	C	A	0.00441	LNPK	-	FALSE	MSTB1	SINE,Alu
chr10	101992810	T	C	0.00149	CWF19L1	-	TRUE	AluJb	SINE,Alu
chr7	100031497	T	G	0.00119	MEPCE	+	FALSE
chr4	42022464	C	A	0.00059	SLC30A9	+	FALSE
chr1	33086876	T	C	0.00104	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr1	10517485	T	C	0.00040		.	FALSE	AluSx1	SINE,Alu
chr1	11734730	C	T	4.90909E-09	MAD2L2	-	FALSE
chr3	57613144	T	C	0.00959	DENND6A,PDE12	+,-	FALSE	AluSz	SINE,Alu
chr3	101399945	A	G	0.00965	RPL24	-	FALSE
chr1	53288897	A	G	0.00160	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	98089475	T	A	0.00385	LOC100506076,LOC100506123	-	FALSE
chr4	56298300	G	A	7.51019E-06	CLOCK	-	FALSE
chr1	160966301	T	C	7.77749E-07	F11R	-	TRUE	AluSg	SINE,Alu
chr4	139091459	T	C	9.74854E-05	SLC7A11-AS1,SLC7A11	+,-	FALSE	(TA)n	SINE,Alu
chr1	205687344	C	T	0.00633	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr7	43665371	A	T	0.00430	STK17A,COA1	+,-	FALSE	(AG)n	SINE,Alu
chr1	19586458	A	G	1.61978E-09	MRTO4	+	TRUE	AluSz	SINE,Alu
chr4	17803604	T	C	0.00172	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	178444613	T	G	0.00630	RASAL2	+	FALSE
chr12	92537702	T	A	0.00368	BTG1	-	FALSE
chr1	19543282	T	C	0.00228	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	87573963	T	C	0.00787	HS2ST1	+	FALSE
chr1	46075188	C	A	0.00199	NASP	+	FALSE	A-rich	SINE,Alu
chr1	9331101	A	G	0.00072	H6PD	+	FALSE	AluSx	SINE,Alu
chr1	220231455	T	C	0.00274	RNU5F-1,BPNT1	+,-	FALSE	AluY	SINE,Alu
chr1	36534934	A	G	0.00464		.	FALSE	AluJo	SINE,Alu
chr1	160967938	T	C	0.00270	F11R	-	TRUE	AluSp	SINE,Alu
chr1	10521172	T	C	0.00295	DFFA	-	TRUE	AluY	SINE,Alu
chr1	1234095	C	A	0.00039	ACAP3	-	FALSE
chr13	114748384	C	T	0.00050	RASA3	-	FALSE
chr1	28826190	A	G	0.00233	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	20976843	G	C	0.00202	PINK1,PINK1-AS	+,-	FALSE
chr1	145322843	C	T	0.00428	NBPF20,NBPF10	+	FALSE
chr1	109535120	G	A	6.51608E-07	WDR47	-	FALSE
chr3	15114385	T	C	0.00146	RBSN	-	TRUE	AluY	SINE,Alu
chr1	10517276	T	C	0.00079		.	FALSE	AluJr	SINE,Alu
chr1	202311040	A	C	0.00588	UBE2T	-	FALSE
chr2	55516940	A	C	0.00389	CCDC88A	-	FALSE	(GA)n	SINE,Alu
chr3	40577761	A	G	0.00701	ZNF621	+	TRUE	AluSz	SINE,Alu
chr1	10518733	T	C	0.00541		.	FALSE	AluSx1	SINE,Alu
chr1	19934879	T	C	0.00454	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	6651456	A	G	0.00614	KLHL21	-	FALSE
chr1	931807	G	A	0.00578		.	FALSE
chr2	61315734	A	G	0.00396	KIAA1841	+	TRUE	AluSg	SINE,Alu
chr5	145493224	A	T	0.00251	LARS	-	FALSE
chr1	146250905	G	C	0.00444	NBPF20,NBPF10,NBPF25P	+	FALSE
chr8	62626962	C	T	0.00823	ASPH	-	FALSE
chr1	6283448	T	C	0.00827	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	156613632	G	A	0.00187	BCAN	+	FALSE
chr2	9661424	G	C	0.00130	ADAM17	-	FALSE
chr1	109535128	G	A	0.00063	WDR47	-	FALSE
chr3	73116347	T	A	0.00109	PPP4R2	+	FALSE
chr3	183900836	G	A	2.54977E-05	AP2M1	+	FALSE
chr11	93466866	G	T	0.00559	MIR1304	-	FALSE	AluJr	SINE,Alu
chr3	184766301	T	C	0.00648	VPS8	+	FALSE
chr5	126889370	C	T	0.00713	PRRC1	+	FALSE
chr2	204162036	A	G	0.00369	CYP20A1	+	TRUE	AluSx	SINE,Alu
chr16	10623660	T	C	0.00074	EMP2	-	TRUE	AluSp	SINE,Alu
chr3	189675266	G	T	0.00781	P3H2	-	FALSE	(TG)n	SINE,Alu
chr1	228107281	G	A	0.00833		.	FALSE
chr2	153512503	C	T	0.00082	PRPF40A	-	FALSE
chr3	150261569	T	G	0.00173	SERP1	-	FALSE
chr3	15114353	T	C	8.61483E-05	RBSN	-	TRUE	AluY	SINE,Alu
chr1	33148635	A	G	0.00168	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr4	17802955	T	C	0.00071	DCAF16	-	FALSE	AluSz	SINE,Alu
chr1	93308168	T	A	0.00314	FAM69A	-	FALSE
chr1	32687475	T	C	0.00785	TMEM234,EIF3I	+,-	FALSE
chr1	214813487	A	G	0.00027	CENPF	+	FALSE
chr4	5743512	T	C	0.00045	EVC	+	FALSE
chr1	115119377	A	T	0.00157	BCAS2	-	FALSE
chr5	130537933	A	G	0.00084	LYRM7	+	TRUE	AluSp	SINE,Alu
chr1	153914500	G	A	3.11507E-05	DENND4B	-	FALSE
chr2	202029997	A	G	0.00335	CFLAR	+	FALSE	(TTA)n	SINE,Alu
chr1	205129319	G	A	0.00177	DSTYK	-	FALSE
chr5	133918134	G	T	0.00404	JADE2	+	FALSE
chr1	120458004	A	T	0.00247	NOTCH2	-	FALSE
chr15	41590287	A	G	0.00319	OIP5-AS1	+	FALSE
chr1	143135240	C	T	0.00391	LOC102723769	-	FALSE
chr2	37331546	T	C	0.00694		.	FALSE	AluJb	SINE,Alu
chr9	116022896	T	C	9.26547E-05	SLC31A1	+	FALSE
chr1	241796949	G	A	0.00053	OPN3,CHML	-	FALSE
chr1	19984346	A	G	0.00071	MINOS1-NBL1,NBL1	+	FALSE
chr1	224302047	C	T	3.20569E-05	FBXO28	+	FALSE
chr1	28859264	T	G	0.00030	RCC1	+	FALSE
chr2	9630231	C	T	0.00895	ADAM17	-	FALSE
chr1	156878044	G	A	9.48586E-05	PEAR1	+	FALSE
chr2	232319529	T	A	1.32288E-06	NCL	-	FALSE
chr1	53288862	A	G	0.00570	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr3	42599091	G	A	0.00196	SEC22C	-	FALSE
chr2	11321880	C	T	0.00064	ROCK2	-	FALSE	AluSx1	SINE,Alu
chr1	93827764	A	G	0.00053	DR1	+	FALSE
chr1	44447006	T	C	0.00768	B4GALT2	+	FALSE	(CAG)n	SINE,Alu
chr1	9163405	T	C	0.00014		.	FALSE	AluSp	SINE,Alu
chr13	20224387	A	G	0.00959	MPHOSPH8	+	FALSE
chr14	50792787	A	G	0.00278	ATP5S	+	TRUE	AluSx	SINE,Alu
chr3	52581295	G	A	1.21436E-06	PBRM1	-	FALSE
chr12	56510704	G	A	0.00042	RPL41	+	FALSE
chr1	9328120	A	G	0.00386	H6PD	+	TRUE	AluJr	SINE,Alu
chr8	30536554	T	C	0.00023	GSR	-	TRUE	AluSp	SINE,Alu
chr1	89447839	C	G	0.00488	KYAT3,RBMXL1	-	FALSE
chr1	148003752	T	C	0.00015	NBPF8	-	TRUE	L1MC4	SINE,Alu
chr2	10076828	A	G	0.00026		.	FALSE	AluJr	SINE,Alu
chr1	10517672	T	C	0.00090		.	FALSE	AluSx1	SINE,Alu
chr1	148753279	G	T	0.00358		.	FALSE
chr1	145273302	A	G	0.00656	NBPF20,NOTCH2NL	+	FALSE
chr1	10517313	T	C	0.00305		.	FALSE	AluJr	SINE,Alu
chr19	3053116	G	C	0.00276	AES	-	FALSE
chr1	99164434	G	A	0.00309	SNX7	+	FALSE
chr9	137330709	G	T	0.00965	RXRA	+	FALSE	(GCTG)n	SINE,Alu
chr14	31916784	T	C	2.67040E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr16	48387296	A	G	0.00058	LONP2,MIR5095	+	TRUE	AluJb	SINE,Alu
chr2	58387000	C	T	0.00027	VRK2,FANCL	+,-	FALSE
chr1	46164493	T	C	0.00330	IPP	-	TRUE	AluJb	SINE,Alu
chr1	16932144	A	C	0.00559	NBPF1	-	FALSE
chr2	206986245	T	C	0.00979		.	FALSE	AluSz	SINE,Alu
chr1	6585215	C	T	0.00286	NOL9	-	FALSE	FAM	SINE,Alu
chr10	129216658	T	C	0.00710	DOCK1	+	FALSE
chr1	45975345	A	G	9.37661E-05	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	16893763	T	C	0.00996	NBPF1	-	FALSE
chr6	13788045	T	C	0.00157	MCUR1	-	TRUE
chr1	246829616	T	C	0.00029	CNST	+	FALSE
chr1	16889575	T	C	0.00467	NBPF1	-	TRUE
chr7	66421684	T	G	0.00042	TMEM248	+	FALSE	AluJr	SINE,Alu
chr1	237063504	A	G	0.00900	MTR	+	FALSE	L1ME3F	SINE,Alu
chr15	90820171	A	G	0.00185		.	FALSE
chr2	38971059	A	C	0.00539	SRSF7	-	FALSE
chr1	179042544	A	G	0.00722	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr7	48146088	A	G	0.00825	UPP1	+	TRUE	AluSq	SINE,Alu
chr1	28835937	A	G	0.00025	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	114519351	T	G	0.00773	HIPK1	+	FALSE
chr9	136209400	A	G	0.00328	MED22	-	FALSE
chr1	205687213	T	A	0.00950	NUCKS1	-	FALSE
chr1	6282324	T	C	0.00013	ICMT	-	TRUE	AluSz	SINE,Alu
chr4	185549875	A	T	0.00616	CASP3	-	FALSE
chr20	25428294	A	G	1.11452E-05	GINS1	+	TRUE	AluSz	SINE,Alu
chr1	10520378	T	C	0.00895		.	FALSE	AluSx1	SINE,Alu
chr2	99812429	A	G	0.00504	MRPL30	+	TRUE	AluSx	SINE,Alu
chr1	1650807	T	C	0.00104	CDK11B,CDK11A	-	FALSE
chr2	37331525	T	C	0.00479		.	FALSE	AluJb	SINE,Alu
chr1	1595602	A	G	9.14189E-05	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr17	53470462	C	T	0.00230	MMD	-	FALSE
chr1	113212976	C	T	0.00043	CAPZA1	+	FALSE
chr3	179117646	G	A	0.00812	GNB4	-	FALSE
chr4	177252327	A	G	3.52508E-05	SPCS3	+	TRUE
chr3	15114493	T	C	2.42944E-10	RBSN	-	TRUE	AluY	SINE,Alu
chr15	42860107	A	G	0.00194	HAUS2	+	TRUE	AluSg	SINE,Alu
chr5	14510067	G	T	0.00130	TRIO	+	FALSE
chr1	214524633	T	A	0.00017	PTPN14	-	FALSE	Alu	SINE,Alu
chr14	53242630	T	C	0.00056	GNPNAT1	-	TRUE	AluJr	SINE,Alu
chr1	145289875	T	C	0.00160	NBPF20	+	FALSE	MIR	SINE,Alu
chr1	28662213	A	G	0.00013	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	9328213	A	G	0.00404	H6PD	+	TRUE	AluJr	SINE,Alu
chr7	300181	G	A	2.39021E-07	FAM20C	+	FALSE
chr3	196670099	A	C	6.06146E-06	NCBP2-AS2	+	FALSE
chr10	63829539	C	T	0.00918	ARID5B	+	FALSE
chr3	10193475	A	G	0.00110	VHL	+	TRUE	AluJr	SINE,Alu
chr1	10517512	T	C	0.00514		.	FALSE	AluSx1	SINE,Alu
chr1	168214098	T	G	0.00134		.	FALSE
chr7	30616247	T	C	0.00887	LOC401320	-	FALSE	THE1B	SINE,Alu
chr2	55199563	G	T	0.00172	RTN4	-	FALSE
chr7	100279138	A	T	0.00741	GIGYF1	-	FALSE	A-rich	SINE,Alu
chr4	140310370	T	C	0.00335	NAA15	+	FALSE	(T)n	SINE,Alu
chr1	59249682	G	A	0.00074	JUN	-	FALSE
chr6	29910604	C	A	0.00144		.	FALSE
chr20	18468633	C	A	3.51877E-10	RBBP9	-	FALSE
chr1	179044100	A	G	0.00897	FAM20B	+	TRUE	AluSx	SINE,Alu
chr3	63987389	T	C	0.00662	ATXN7	+	FALSE
chr1	16918783	C	T	0.00252	NBPF1	-	FALSE
chr2	99812414	A	G	9.82924E-05	MRPL30	+	TRUE	AluSx	SINE,Alu
chr6	44417136	A	G	0.00274	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	54493259	T	C	0.00203	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr1	109465167	T	A	0.00233	GPSM2	+	FALSE
chr1	16133912	T	C	0.00126	UQCRHL	-	TRUE
chr1	16909129	T	C	0.00131	NBPF1	-	FALSE
chr2	86252038	T	C	0.00931	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	36068227	T	C	0.00398	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	11979814	G	A	0.00041	KIAA2013	-	FALSE
chr10	45499895	G	A	0.00255	ZNF22	+	FALSE
chr1	161160460	T	A	0.00298	ADAMTS4	-	FALSE	(CA)n	SINE,Alu
chr19	42376710	A	G	1.82395E-05		.	FALSE	AluSp	SINE,Alu
chr8	146280802	C	T	0.00492	C8orf33	+	FALSE	LTR13	SINE,Alu
chr5	139931626	T	G	0.00490	SRA1	-	FALSE
chr1	12628188	T	C	6.05765E-06	DHRS3	-	FALSE
chr3	124950419	C	A	0.00060	ZNF148	-	FALSE
chr3	44790759	T	C	1.45198E-07	KIAA1143	-	TRUE	AluY	SINE,Alu
chr1	22853141	G	A	0.00060	ZBTB40	+	FALSE
chr9	86554217	C	T	0.00272	C9orf64	-	FALSE	AluSq2	SINE,Alu
chr1	9160989	T	C	0.00041		.	FALSE	AluJb	SINE,Alu
chr5	179041779	C	T	0.00430	HNRNPH1	-	FALSE
chr1	19586520	A	G	0.00659	MRTO4	+	TRUE	AluSz	SINE,Alu
chr4	57326236	A	G	0.00699	PAICS	+	TRUE	AluJr	SINE,Alu
chr1	1597403	C	T	0.00912	CDK11B,SLC35E2B	-	FALSE
chr1	46830110	A	G	0.00283	NSUN4	+	TRUE	AluSx1	SINE,Alu
chr4	38946758	G	A	0.00294	FAM114A1	+	FALSE
chr8	10689212	C	T	3.39921E-05	PINX1	-	FALSE
chr1	28865502	G	A	0.00073	RCC1	+	FALSE
chr1	36068231	T	C	0.00582	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	109855150	A	C	0.00062	SORT1	-	FALSE	A-rich	SINE,Alu
chr1	89447715	T	G	0.00137	KYAT3,RBMXL1	-	FALSE
chrX	3523061	C	G	0.00023	PRKX	-	FALSE	(AC)n	SINE,Alu
chr1	75171751	T	C	0.00100	CRYZ	-	FALSE
chr1	38423181	T	G	0.00793	SF3A3	-	FALSE	AluJo	SINE,Alu
chr7	32908135	C	G	0.00076	KBTBD2	-	FALSE
chr2	176792536	G	T	0.00211	LNPK	-	FALSE
chr1	19543247	T	C	5.23836E-05	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	20976589	C	T	0.00125	PINK1,PINK1-AS	+,-	FALSE
chr2	27293349	C	T	0.00503	AGBL5,OST4	+,-	FALSE
chr15	90820068	A	G	0.00194		.	FALSE	AluY	SINE,Alu
chr1	46049716	T	G	0.00761	NASP	+	FALSE
chr2	217366911	A	G	0.00449		.	FALSE	AluSz6	SINE,Alu
chr1	120612163	C	A	0.00566	NOTCH2	-	FALSE
chr5	151041869	T	A	0.00305	SPARC	-	FALSE
chr3	112299732	A	G	0.00189	SLC35A5	+	FALSE
chr2	128952015	A	G	0.00908	UGGT1	+	TRUE	AluSx1	SINE,Alu
chr1	205683408	C	T	0.00082	NUCKS1	-	FALSE
chr1	1152310	C	T	0.00862	SDF4	-	FALSE
chr11	3716835	C	T	0.00828	NUP98	-	FALSE
chr1	3545194	C	G	0.00254	TPRG1L	+	FALSE
chr1	26604691	G	C	0.00043	CEP85	+	FALSE
chr21	46935076	T	G	0.00164	SLC19A1	-	FALSE
chr1	144604425	C	T	0.00269	NBPF20	+	FALSE
chr17	57281021	A	G	9.11421E-05	PRR11	+	TRUE	AluSz	SINE,Alu
chr3	42266346	A	G	0.00824	TRAK1	+	FALSE
chr5	133738270	T	C	5.55380E-10	CDKN2AIPNL	-	TRUE	FRAM	SINE,Alu
chr5	170832637	C	T	0.00071	NPM1	+	FALSE
chr1	27678721	A	G	0.00030	SYTL1	+	TRUE	AluSx1	SINE,Alu
chr12	69237057	A	G	0.00259	MDM2	+	TRUE
chr1	117645998	A	G	0.00057		.	FALSE
chr2	187544218	T	G	0.00796	ITGAV	+	FALSE
chr16	53525857	A	G	0.00093	AKTIP	-	FALSE
chr1	55541174	A	G	0.00038	USP24	-	FALSE
chr7	128142833	A	G	6.82570E-05	METTL2B	+	TRUE	AluSx1	SINE,Alu
chr5	125961816	A	G	0.00013	PHAX	+	TRUE	FLAM_C	SINE,Alu
chr1	154557184	G	A	0.00558	ADAR	-	FALSE	A-rich	SINE,Alu
chr17	61909370	G	A	0.00152	PSMC5	+	FALSE
chr6	17557412	C	T	0.00986	CAP2	+	FALSE
chr1	74672640	T	A	0.00011	FPGT-TNNI3K,FPGT	+	FALSE
chr2	31611143	C	T	0.00117	XDH	-	FALSE
chr1	54571374	A	G	0.00280	TCEANC2	+	TRUE	AluSc	SINE,Alu
chr2	201842323	T	C	0.00591	FAM126B	-	TRUE	AluJb	SINE,Alu
chr1	10520331	C	T	0.00816		.	FALSE	AluSx1	SINE,Alu
chr4	17803604	T	C	0.00414	DCAF16	-	TRUE	AluY	SINE,Alu
chr1	10517512	T	C	0.00646		.	FALSE	AluSx1	SINE,Alu
chr14	105270478	G	T	0.00252	ZBTB42	+	FALSE
chr5	151041883	G	A	0.00343	SPARC	-	FALSE
chr1	3545199	G	C	0.00188	TPRG1L	+	FALSE
chr5	126171974	C	T	0.00867	LMNB1	+	FALSE
chr19	13054905	T	C	0.00324	CALR	+	FALSE	(T)n	SINE,Alu
chrX	2824933	T	C	0.00066	ARSD	-	TRUE	AluSx1	SINE,Alu
chr1	16891365	G	A	0.00609	NBPF1	-	FALSE
chr7	137612915	G	A	0.00057	CREB3L2	-	FALSE
chr1	146650337	G	T	0.00589	PDIA3P1	+	FALSE
chr1	120163518	C	T	0.00646	ZNF697	-	FALSE
chr1	22418284	G	T	0.00024	CDC42	+	FALSE	(T)n	SINE,Alu
chr1	6283306	T	C	0.00505	ICMT	-	TRUE	AluSx3	SINE,Alu
chr1	10517313	T	C	0.00196		.	FALSE	AluJr	SINE,Alu
chr1	93599279	G	A	0.00849	MTF2	+	FALSE
chr2	37431681	A	G	0.00436	CEBPZOS,CEBPZ	+,-	FALSE	AluSc	SINE,Alu
chr16	88891240	C	A	0.00826	GALNS	-	FALSE
chr1	53684924	A	G	0.00913	C1orf123	-	FALSE	L1MA5A	SINE,Alu
chr1	142619386	G	A	0.00637		.	FALSE
chr2	206987725	T	C	0.00108		.	FALSE	AluJb	SINE,Alu
chr3	47386061	A	C	8.10198E-06	KLHL18	+	FALSE
chr1	11119935	G	T	2.46542E-05	SRM	-	FALSE
chr2	37329307	T	C	0.00201		.	FALSE	AluJr4	SINE,Alu
chr3	17201882	C	T	0.00259	TBC1D5	-	FALSE
chr1	1252443	T	C	8.33820E-06	CPSF3L	-	TRUE	AluJr	SINE,Alu
chr1	36067811	T	C	0.00467	PSMB2	-	TRUE	AluSz	SINE,Alu
chr1	45976147	G	A	0.00476	MMACHC	+	FALSE	AluJr	SINE,Alu
chr12	125511226	A	G	0.00205	THRIL	-	FALSE	AluSx1	SINE,Alu
chr2	178129405	C	T	0.00295	NFE2L2	-	FALSE	(CGG)n	SINE,Alu
chr1	6283296	T	C	0.00122	ICMT	-	TRUE	AluSx3	SINE,Alu
chr5	36143392	C	T	0.00625	LMBRD2	-	FALSE
chr5	130537666	A	G	9.26326E-06	LYRM7	+	TRUE	AluJb	SINE,Alu
chr1	145513017	A	G	3.59549E-05	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	109419841	C	T	0.00057	GPSM2	+	FALSE
chr1	21545088	T	C	0.00737	ECE1	-	FALSE	AluSx1	SINE,Alu
chr1	7828190	A	C	0.00049	CAMTA1	+	FALSE	(A)n	SINE,Alu
chr2	206986314	T	C	0.00936		.	FALSE	AluSz	SINE,Alu
chr10	121588038	A	C	0.00100	INPP5F	+	FALSE
chr1	114443574	A	G	0.00162	AP4B1-AS1,AP4B1	+,-	FALSE	AluSp	SINE,Alu
chr3	14986111	T	C	0.00000	FGD5-AS1	-	TRUE	FLAM_C	SINE,Alu
chr4	128958127	A	G	0.00556	ABHD18	+	TRUE	AluSx3	SINE,Alu
chr1	68167217	G	T	0.00036	GNG12	-	FALSE
chr22	41252612	G	A	0.00561	ST13	-	FALSE
chr1	207943188	A	G	0.00263	CD46	+	TRUE	AluSx1	SINE,Alu
chr8	22111410	A	G	0.00396		.	FALSE	AluSz	SINE,Alu
chr2	172178540	T	C	0.00040	METTL8	-	TRUE	AluSx3	SINE,Alu
chr11	19184951	G	A	0.00066	ZDHHC13	+	FALSE
chr1	1534676	C	T	4.01953E-10	FNDC10	-	FALSE
chr3	15113736	T	C	0.00081	RBSN	-	TRUE	AluSz6	SINE,Alu
chr1	10518052	T	C	0.00791		.	FALSE	AluJr	SINE,Alu
chr1	38174987	T	C	0.00350	CDCA8	+	FALSE
chr1	46521559	A	T	0.00177	PIK3R3	-	FALSE
chr1	8938276	T	A	0.00178	ENO1	-	FALSE
chr5	122682348	A	G	0.00377	CEP120	-	FALSE
chr1	6730782	C	T	0.00807	DNAJC11	-	FALSE
chr1	19984104	A	C	0.00402	MINOS1-NBL1,NBL1	+	FALSE
chr3	10322521	T	C	0.00531	TATDN2	+	FALSE
chr9	137330716	A	C	0.00058	RXRA	+	FALSE
chr10	124913908	C	A	0.00784	BUB3	+	FALSE
chr1	184661933	G	A	0.00138	EDEM3	-	FALSE
chr5	68858545	C	G	0.00034	GTF2H2C,GTF2H2C_2	+	FALSE	AluSz	SINE,Alu
chr1	16890428	T	A	1.76753E-05	NBPF1	-	FALSE
chr1	151092875	A	G	0.00154	GABPB2	+	TRUE	AluSp	SINE,Alu
chr1	36068369	T	C	5.31121E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	138356	C	A	0.00481	LOC729737	-	FALSE
chr9	131094270	A	G	0.00686	COQ4	+	TRUE	AluSx	SINE,Alu
chr2	3592602	T	C	0.00232	RNASEH1	-	TRUE	AluSz6	SINE,Alu
chr1	204525672	A	G	0.00375	MDM4	+	TRUE	AluSz	SINE,Alu
chr8	37351214	T	C	0.00109	LINC01605	-	FALSE
chr1	15993013	G	A	1.61862E-10		.	FALSE
chr5	65108215	A	G	0.00052	NLN	+	FALSE
chr1	148010952	C	T	0.00393	NBPF8	-	FALSE
chr1	10517290	T	C	0.00119		.	FALSE	AluJr	SINE,Alu
chr5	179048585	T	C	0.00150	HNRNPH1	-	FALSE
chr12	98942904	A	G	0.00259	TMPO	+	TRUE	AluSc	SINE,Alu
chr1	116234313	A	G	0.00262	VANGL1	+	FALSE
chr1	16258610	C	G	0.00142	SPEN	+	FALSE
chr2	132481470	C	T	0.00594	C2orf27A	+	FALSE
chr9	102744698	G	T	0.00301	ERP44	-	FALSE
chr3	195435168	T	G	0.00111	LINC00969	+	FALSE
chr1	145284134	G	C	0.00203	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr3	40503729	A	G	5.91625E-05	RPL14	+	FALSE
chr3	133307637	G	T	0.00092	CDV3	+	FALSE
chr1	788795	T	G	0.00333	LINC01128	+	FALSE	Charlie19a	SINE,Alu
chr1	100550370	T	A	0.00731	SASS6	-	FALSE
chr15	74210428	G	A	0.00784	LOXL1-AS1	-	FALSE	L2a	SINE,Alu
chr5	55235967	A	G	0.00639	IL6ST	-	FALSE	(AT)n	SINE,Alu
chr2	37331037	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr13	111301048	T	C	0.00037	CARS2	-	FALSE
chr1	21793735	C	G	0.00405	NBPF3	+	FALSE
chr20	25427756	A	G	0.00396	GINS1	+	TRUE	AluSz	SINE,Alu
chr2	48605828	T	A	0.00650	FOXN2	+	FALSE	(T)n	SINE,Alu
chr1	114306563	T	A	0.00191	RSBN1	-	FALSE
chr1	1622754	A	G	0.00426	CDK11B,SLC35E2B	-	FALSE	MLT1F2	SINE,Alu
chr1	111721354	G	T	0.00616	CEPT1	+	FALSE
chr10	124815149	C	G	0.00993	ACADSB	+	FALSE	THE1A-int	SINE,Alu
chr1	33086876	T	C	0.00672	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr6	158613393	A	T	0.00108	GTF2H5	+	FALSE
chr1	214524576	T	C	0.00337	PTPN14	-	TRUE	AluSg	SINE,Alu
chr12	125514120	A	G	0.00232		.	FALSE	(TA)n	SINE,Alu
chr1	39549983	G	A	0.00896	MACF1	+	FALSE
chr2	206983132	T	C	0.00861		.	FALSE	AluJb	SINE,Alu
chr1	16905837	G	A	0.00029	NBPF1	-	FALSE
chr1	1634860	G	T	0.00103	CDK11B,CDK11A	-	FALSE
chr13	79188534	T	A	0.00698	RNF219-AS1,RNF219	+,-	FALSE
chr4	177252327	A	G	2.51883E-09	SPCS3	+	TRUE
chr16	75479474	T	C	2.06057E-06	TMEM170A	-	TRUE	AluJb	SINE,Alu
chr1	113212974	A	T	0.00424	CAPZA1	+	FALSE
chr1	116235277	C	T	0.00396	VANGL1	+	FALSE
chr5	35058802	T	C	0.00152	PRLR	-	FALSE
chr3	32207907	T	C	0.00922	GPD1L	+	FALSE
chr3	197362030	C	T	0.00302		.	FALSE
chr2	242447628	T	G	0.00674	STK25	-	FALSE
chr1	19543973	T	C	0.00236	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr1	144931727	G	A	0.00037	NBPF20,PDE4DIP	+,-	FALSE
chr1	26755510	A	G	0.00013	LIN28A	+	TRUE	AluSc	SINE,Alu
chr1	70718276	G	T	0.00836		.	FALSE
chr1	68168152	C	T	0.00258	GNG12	-	FALSE
chr5	177658896	A	C	0.00642	PHYKPL	-	FALSE
chr3	172365832	T	G	0.00011	NCEH1	-	FALSE
chr9	125609938	A	T	0.00904		.	FALSE
chr3	45721827	C	A	0.00142	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	43897496	G	A	0.00481	SZT2	+	FALSE
chr1	16893686	G	C	0.00823	NBPF1	-	FALSE
chr13	38936619	G	T	0.00212	UFM1	+	FALSE
chr1	109351501	A	G	0.00921	STXBP3	+	FALSE
chr1	183187603	C	T	0.00357	LAMC2	+	FALSE
chr4	88059664	T	G	0.00178	AFF1	+	FALSE	(GT)n	SINE,Alu
chr1	6354955	G	A	0.00282	ACOT7	-	FALSE
chr3	179306775	C	T	7.88487E-06	MRPL47	-	FALSE
chr12	56510709	G	A	0.00047	RPL41	+	FALSE
chr1	95660026	G	T	0.00129	TMEM56-RWDD3,LOC101928118,TMEM56	+,-	FALSE
chr4	190878580	A	G	0.00097	FRG1	+	FALSE
chr2	38971640	A	C	0.00050	SRSF7	-	FALSE
chr1	220231959	T	C	2.75997E-05	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr16	10624957	T	C	0.00034	EMP2	-	TRUE	AluSx3	SINE,Alu
chr1	180247474	T	C	0.00022		.	FALSE
chr3	75779619	T	A	0.00061	ZNF717	-	FALSE
chr1	6283264	T	C	5.77123E-05	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	197611125	A	G	0.00948		.	FALSE	AluSx1	SINE,Alu
chr1	151092839	A	G	0.00135	GABPB2	+	TRUE	AluSp	SINE,Alu
chr1	10518052	T	C	0.00179		.	FALSE	AluJr	SINE,Alu
chr1	28833494	G	A	0.00901	SNHG3,RCC1	+	FALSE
chr2	201253956	A	G	1.78964E-05	SPATS2L	+	FALSE
chr1	67874731	T	C	0.00817	SERBP1	-	TRUE	AluSx3	SINE,Alu
chr1	109818158	C	T	4.51493E-05	CELSR2	+	FALSE
chr1	204526710	A	G	0.00082	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	16892277	G	T	0.00164	NBPF1	-	FALSE
chr1	16909208	C	G	0.00482	NBPF1	-	FALSE
chr19	24104018	A	G	0.00543	ZNF726	+	FALSE	AluSg4	SINE,Alu
chr5	34906156	T	C	2.52494E-05	RAD1	-	TRUE	AluSx1	SINE,Alu
chr1	33149373	A	G	0.00264	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	145689533	A	G	0.00618	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu

RBP	NUFIP2
Knock-Method	shRNA
RBP Family	NUFIP2
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR584JRB
Platform	HiSeq
Pubmed ID	32252787

NUFIP2 - Target Gene Network