RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	15989141	C	G	0.00364		.	FALSE
chr6	31236900	G	A	0.00167		.	FALSE
chr1	220239448	T	C	0.00157	RNU5F-1,BPNT1	+,-	FALSE
chr1	200521297	C	T	0.00133	KIF14	-	FALSE	(T)n	SINE,Alu
chr5	125961534	A	G	0.00233	PHAX	+	TRUE	AluSz6	SINE,Alu
chr2	178406765	T	A	0.00325	AGPS	+	FALSE
chr8	144940794	G	C	0.00038	EPPK1	-	FALSE
chr2	1637531	A	G	0.00664	PXDN	-	FALSE
chr4	170678993	T	C	3.15742E-05	HPF1	-	FALSE
chr1	26131654	G	A	0.00149	SEPN1	+	FALSE
chr9	140709880	C	T	0.00178	EHMT1	+	FALSE
chr15	32820819	T	G	0.00718	WHAMMP1	-	FALSE
chr1	184762627	T	C	0.00519	FAM129A	-	TRUE	AluSz	SINE,Alu
chr1	200521412	G	A	0.00292	KIF14	-	FALSE
chr1	45975358	A	G	0.00089	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	214524531	T	C	0.00753	PTPN14	-	TRUE	AluSg	SINE,Alu
chr1	25663918	G	A	0.00951	RSRP1	-	FALSE
chr1	205737665	G	T	0.00025	RAB29	-	FALSE	AluSq2	SINE,Alu
chr6	42855967	A	G	0.00151	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr7	117825681	A	G	1.90524E-05	LSM8	+	FALSE
chr1	46033497	T	C	0.00719	AKR1A1	+	FALSE	AluYk3	SINE,Alu
chr1	144828857	C	G	4.37583E-07	NBPF20,NBPF9	+	FALSE
chr15	41591451	A	G	1.78515E-09	OIP5-AS1	+	TRUE	AluSx	SINE,Alu
chr1	10490539	G	C	0.00134	APITD1,APITD1-CORT	+	FALSE
chr3	195965115	A	T	0.00098	PCYT1A	-	FALSE
chr1	144615223	C	G	0.00324	NBPF20,NBPF9	+	FALSE
chr1	89225976	T	C	0.00586	PKN2	+	FALSE
chr3	17201882	C	T	0.00282	TBC1D5	-	FALSE
chr10	60047609	A	G	0.00979	CISD1	+	FALSE	(A)n	SINE,Alu
chr1	10517352	T	C	0.00311		.	FALSE	AluJr	SINE,Alu
chr1	145100772	A	G	0.00945	NBPF20,SEC22B	+	TRUE	AluSg4	SINE,Alu
chr7	100031498	T	C	0.00110	MEPCE	+	FALSE
chr4	129795660	T	A	0.00454	JADE1	+	FALSE
chr2	20818286	A	C	0.00714	HS1BP3	-	FALSE
chr4	165998152	T	C	0.00288	TMEM192	-	TRUE	AluSx	SINE,Alu
chr1	10517290	T	C	0.00366		.	FALSE	AluJr	SINE,Alu
chr1	118066459	A	G	1.18146E-05	MAN1A2	+	FALSE
chr14	19686757	A	G	0.00565	DUXAP10	+	FALSE
chr1	150548887	C	T	0.00014	MCL1	-	FALSE
chr1	179310439	C	T	0.00907	SOAT1	+	FALSE
chr12	1611798	C	T	0.00338	LINC00942	+	FALSE
chr1	87573348	C	A	0.00879	HS2ST1	+	FALSE
chr2	99812815	A	G	0.00245	MRPL30	+	TRUE	AluJb	SINE,Alu
chr14	62213927	C	A	0.00771	HIF1A,HIF1A-AS2	+,-	FALSE
chr3	195243002	C	A	0.00358	PPP1R2	-	FALSE
chr21	34728113	A	G	0.00531	IFNAR1	+	TRUE	AluSc	SINE,Alu
chr17	73819348	T	C	0.00213	UNK	+	FALSE
chr2	9630248	G	T	0.00764	ADAM17	-	FALSE
chr6	42045545	A	G	0.00440	TAF8	+	TRUE	AluSz	SINE,Alu
chr2	69688754	T	C	0.00319	AAK1	-	TRUE	AluSq2	SINE,Alu
chr4	7764148	G	A	2.22190E-11	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	26755494	A	G	0.00874	LIN28A	+	TRUE	AluSc	SINE,Alu
chr2	61277835	A	G	0.00105	PEX13	+	TRUE	AluY	SINE,Alu
chr7	99636950	A	G	0.00927	ZKSCAN1	+	FALSE	AluSx1	SINE,Alu
chr1	53291382	A	G	0.00114	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	94351064	A	T	0.00212	GCLM	-	FALSE
chr1	16928622	C	A	0.00197	NBPF1	-	FALSE
chr1	25894471	G	A	0.00778	LDLRAP1	+	FALSE	MIRb	SINE,Alu
chr1	202696878	C	T	0.00159	KDM5B	-	FALSE
chr17	37618251	T	G	0.00959	CDK12	+	FALSE	G-rich	SINE,Alu
chr14	31916944	T	C	1.05468E-06	LOC101927124,DTD2	+,-	FALSE	AluSc8	SINE,Alu
chr2	113334178	A	T	0.00654	POLR1B	+	FALSE	L1MA10	SINE,Alu
chr16	57505637	T	A	0.00643	POLR2C	+	FALSE
chrX	2824343	T	C	0.00108	ARSD	-	TRUE	AluJb	SINE,Alu
chr1	117530188	A	G	0.00199	PTGFRN	+	FALSE
chr1	1595540	T	C	0.00048	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr1	10043527	A	G	0.00811	NMNAT1	+	TRUE	AluSx3	SINE,Alu
chr4	53732381	C	T	0.00433	RASL11B	+	FALSE	(TTTCTTT)n	SINE,Alu
chr1	155058663	G	A	0.00300	EFNA3	+	FALSE
chr15	90819409	A	G	5.75884E-05		.	FALSE	AluSx	SINE,Alu
chr1	168220535	A	G	0.00665		.	FALSE	AluSz6	SINE,Alu
chr1	245006499	C	G	0.00171	COX20	+	FALSE
chr2	72403387	C	A	0.00486	EXOC6B	-	FALSE
chr12	1085978	T	A	0.00421	RAD52	-	FALSE	L2	SINE,Alu
chr16	10625049	T	C	1.15092E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr3	196078364	G	A	6.64958E-05		.	FALSE	GA-rich	SINE,Alu
chr1	164820482	T	A	0.00045	PBX1	+	FALSE
chr12	53936878	G	T	0.00036	ATF7	-	FALSE
chr3	48894565	T	A	0.00142	SLC25A20	-	FALSE
chr9	136209400	A	G	0.00328	MED22	-	FALSE
chr1	19934793	G	A	0.00376	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr1	36068231	T	C	0.00935	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	26755455	A	G	0.00342	LIN28A	+	TRUE	AluSc	SINE,Alu
chr3	24163645	C	G	1.00972E-05	THRB	-	FALSE
chr1	10519888	T	C	0.00218		.	FALSE	AluJr	SINE,Alu
chr1	9644847	A	G	0.00672		.	FALSE	AluJr	SINE,Alu
chr22	50745987	C	G	0.00683	PLXNB2	-	FALSE
chr17	40466890	G	T	0.00260	STAT3	-	FALSE	AluSc8	SINE,Alu
chr1	35649749	C	A	0.00597	SFPQ	-	FALSE
chr1	183486859	G	A	0.00831	SMG7	+	FALSE
chr1	16933135	G	T	2.86961E-06	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr4	17802819	T	C	0.00112	DCAF16	-	TRUE	AluSz	SINE,Alu
chr2	183643241	C	A	0.00108	DNAJC10	+	FALSE
chr1	144868170	C	T	0.00750	NBPF20,PDE4DIP	+,-	FALSE
chr1	25893928	T	A	0.00388	LDLRAP1	+	FALSE
chr1	204189357	C	T	0.00835	PLEKHA6	-	FALSE
chr4	95586725	T	A	0.00743	PDLIM5	+	FALSE
chr3	47125385	G	A	0.00496	SETD2	-	FALSE
chr5	122165512	C	A	0.00276	SNX2	+	FALSE
chr1	1595078	T	C	0.00714	CDK11B,SLC35E2B	-	FALSE	AluSg	SINE,Alu
chr1	204524546	A	G	0.00054	MDM4	+	TRUE	AluY	SINE,Alu
chr3	182614493	T	C	0.00195	ATP11B	+	FALSE
chr1	53289940	A	G	0.00694	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr3	101284940	T	C	8.16697E-05	TRMT10C	+	FALSE
chr3	14526653	G	T	0.00936	SLC6A6	+	FALSE
chr1	1597356	G	C	0.00995	CDK11B,SLC35E2B	-	FALSE
chr5	79923990	T	C	0.00812	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	184675814	G	A	0.00730	EDEM3	-	FALSE
chr1	10517623	T	C	8.06723E-05		.	FALSE	AluSx1	SINE,Alu
chr1	15844615	A	G	0.00792	CASP9	-	FALSE
chr1	19565338	C	T	0.00631	LOC101927895,EMC1	+,-	FALSE
chr10	75008841	T	C	0.00088	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	165877575	A	C	0.00839	UCK2	+	FALSE
chr1	25554719	G	A	0.00403	SYF2	-	FALSE
chr2	128949255	A	G	0.00063	UGGT1	+	TRUE	AluSg	SINE,Alu
chr1	23636278	A	T	0.00085	HNRNPR	-	FALSE
chr1	36068370	T	C	4.62049E-05	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	10221302	G	A	0.00119	UBE4B	+	FALSE
chr1	6279957	A	G	0.00814	RNF207	+	TRUE	AluSp	SINE,Alu
chr1	120163248	G	A	0.00204	ZNF697	-	FALSE
chr7	300512	G	A	3.09252E-06	FAM20C	+	FALSE
chr11	4159457	A	G	0.00764	RRM1	+	FALSE
chr11	65544575	T	C	0.00200	AP5B1	-	TRUE	AluJb	SINE,Alu
chr8	144827207	A	T	0.00038	FAM83H-AS1	+	FALSE	ERVL-B4-int	SINE,Alu
chr6	32789807	C	T	0.00281		.	FALSE
chr3	197399402	T	C	0.00840	RUBCN	-	FALSE
chr10	75008845	T	C	4.48613E-05	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr7	129592510	G	T	0.00165	UBE2H	-	FALSE
chr1	3697550	C	A	0.00078	LRRC47	-	FALSE	AluSc	SINE,Alu
chr1	234561498	T	C	0.00092	TARBP1	-	FALSE
chr11	68523016	T	C	0.00016	CPT1A	-	TRUE	AluY	SINE,Alu
chr1	87213174	T	G	0.00081	SH3GLB1	+	FALSE
chr17	42877749	T	C	0.00287	GJC1	-	TRUE	AluSg	SINE,Alu
chr1	145281613	C	A	0.00979	NBPF20,NOTCH2NL	+	FALSE
chr1	115299505	A	T	0.00064	CSDE1	-	FALSE
chr2	24225006	A	G	0.00141		.	FALSE	AluSx	SINE,Alu
chr3	188602081	A	C	7.06828E-05	LPP	+	FALSE	MIRc	SINE,Alu
chr3	44791454	A	T	3.12862E-05	KIAA1143	-	FALSE	AluJr	SINE,Alu
chr1	39471000	G	A	0.00518	AKIRIN1	+	FALSE
chr1	87811070	G	A	0.00396	LMO4	+	FALSE
chr9	33046889	T	A	0.00932	SMU1	-	FALSE	AluSz	SINE,Alu
chr1	142619386	G	A	0.00637		.	FALSE
chr1	36533368	A	G	0.00635		.	FALSE	AluSx	SINE,Alu
chr12	98943201	A	G	9.51066E-07	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	167758262	C	T	0.00663	MPZL1	+	FALSE
chr12	27953264	A	T	0.00688	KLHL42	+	FALSE
chr3	195393406	C	T	0.00690	SDHAP2	+	FALSE
chr1	43309548	G	A	0.00764	ERMAP	+	FALSE
chr1	204526611	A	G	0.00402	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	53289892	A	G	0.00079	ZYG11B	+	TRUE	FRAM	SINE,Alu
chr1	224575827	T	C	0.00214	WDR26	-	FALSE
chr5	151041869	T	A	0.00305	SPARC	-	FALSE
chr1	212277618	T	G	0.00173	DTL	+	FALSE
chr1	32377391	G	A	0.00439	PTP4A2	-	FALSE
chr1	44463185	T	G	0.00427	SLC6A9	-	FALSE
chr1	36534086	A	G	0.00157		.	FALSE	FLAM_A	SINE,Alu
chr1	247353355	G	A	0.00628		.	FALSE
chr1	94351064	A	T	0.00620	GCLM	-	FALSE
chr1	144595935	G	A	0.00860	NBPF20	+	FALSE	AluJb	SINE,Alu
chr1	23519504	T	A	3.21384E-05	HTR1D	-	FALSE
chr3	33138549	G	A	2.02580E-06	GLB1	-	FALSE
chr3	33877626	G	A	2.14228E-08	PDCD6IP	+	FALSE
chr1	100489619	A	G	0.00319	SLC35A3	+	TRUE
chr17	57281034	A	G	0.00111	PRR11	+	TRUE	AluSz	SINE,Alu
chr1	19953120	G	A	0.00025	MINOS1,MINOS1-NBL1	+	FALSE
chr2	37331037	T	C	0.00036		.	FALSE	AluSx1	SINE,Alu
chr8	41399912	C	A	0.00056	LOC102723729,GINS4	+,-	FALSE	AluSx3	SINE,Alu
chr4	99801986	C	A	0.00687	EIF4E	-	FALSE
chr2	75118856	T	C	1.43220E-05	HK2	+	FALSE	(ATTTTA)n	SINE,Alu
chr2	37329307	T	C	0.00201		.	FALSE	AluJr4	SINE,Alu
chr12	76423035	A	G	0.00025	PHLDA1	-	FALSE
chr4	165996838	T	C	0.00480		.	FALSE	AluSg4	SINE,Alu
chr1	120286837	A	G	0.00153	PHGDH	+	FALSE
chr1	36614708	C	T	0.00201	TRAPPC3	-	FALSE
chr19	33882222	G	A	0.00236	PEPD	-	FALSE
chr3	14528004	T	C	0.00091	SLC6A6	+	FALSE
chr3	124948049	T	C	0.00709	ZNF148	-	TRUE
chr3	155660873	A	G	0.00018		.	FALSE	AluSz	SINE,Alu
chr2	55776561	T	A	0.00092	PPP4R3B	-	FALSE
chr1	17733270	T	A	0.00088	RCC2	-	FALSE
chr3	148748199	C	A	3.38210E-05	HLTF	-	FALSE
chr1	93297595	G	T	0.00479	RPL5	+	FALSE
chr1	43996594	T	C	0.00836	PTPRF	+	FALSE	(CGGCTC)n	SINE,Alu
chr1	33145959	T	G	0.00755	SYNC,RBBP4	+,-	FALSE	(T)n	SINE,Alu
chr1	207943188	A	G	0.00263	CD46	+	TRUE	AluSx1	SINE,Alu
chr2	206987136	T	C	0.00189		.	FALSE	AluSx	SINE,Alu
chr14	105676287	C	T	0.00036	BRF1	-	FALSE
chr1	29519712	T	C	0.00017	MECR	-	TRUE	AluJb	SINE,Alu
chr12	131356731	T	C	2.96756E-07	RAN	+	FALSE	(GGCCGG)n	SINE,Alu
chr1	246931057	A	G	0.00048	SCCPDH	+	FALSE
chr6	13789467	T	C	0.00019	MCUR1	-	TRUE	AluSg	SINE,Alu
chr1	55319888	T	G	0.00000	DHCR24	-	FALSE
chr1	31905886	C	A	0.00026	SERINC2	+	FALSE
chr4	119555142	A	G	4.95460E-05	LOC729218	+	FALSE
chr1	26143725	A	T	0.00818	SEPN1	+	FALSE	AluSx	SINE,Alu
chr1	21810587	A	G	0.00563	NBPF3	+	FALSE
chr1	142619487	A	G	0.00511		.	FALSE
chr1	150199123	G	T	0.00625	ANP32E	-	FALSE
chr3	112299732	A	G	0.00189	SLC35A5	+	FALSE
chr1	53378536	T	C	0.00075	ECHDC2	-	TRUE	AluSp	SINE,Alu
chr1	113000565	A	G	0.00216	CTTNBP2NL	+	FALSE
chr1	32833541	T	C	0.00903	BSDC1	-	TRUE
chr3	45721922	A	G	0.00181	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr11	111431662	T	A	0.00204	LAYN	+	FALSE
chr1	16112795	A	G	4.56234E-06	FBLIM1	+	FALSE
chr3	194369580	C	A	0.00042	LSG1	-	FALSE
chr17	73702478	G	C	8.31704E-05	SAP30BP	+	FALSE
chr1	569492	T	C	0.00743		.	FALSE
chr1	145369556	A	G	0.00061	NBPF20,NBPF10	+	TRUE	L1MC4	SINE,Alu
chr2	37327676	T	C	0.00462		.	FALSE
chr7	38764395	T	C	0.00139	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	47140872	T	C	0.00081	EFCAB14-AS1,EFCAB14	+,-	FALSE
chr2	128061053	A	G	0.00184	MAP3K2	-	FALSE
chr9	133778117	C	T	0.00739	FIBCD1	-	FALSE
chr16	31469051	T	C	0.00278		.	FALSE	AluSz	SINE,Alu
chr1	144014068	T	C	0.00118		.	FALSE
chr3	172115590	A	G	0.00355	FNDC3B	+	FALSE
chr1	11347152	A	T	0.00401	UBIAD1	+	FALSE
chr12	27848053	A	T	0.00090	PPFIBP1	+	FALSE
chr1	38423235	C	A	0.00040	SF3A3	-	FALSE	AluJo	SINE,Alu
chr2	46414708	G	A	0.00173	PRKCE	+	FALSE
chr1	144813815	A	G	2.28281E-05	NBPF20,NBPF9	+	FALSE
chr1	10520683	T	C	0.00582	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	146400122	C	G	0.00190	NBPF20,NBPF10,NBPF25P,NBPF12	+	FALSE
chr1	151966348	C	T	0.00511	S100A10	-	FALSE
chr3	57613144	T	C	0.00959	DENND6A,PDE12	+,-	FALSE	AluSz	SINE,Alu
chr1	33147928	A	G	9.58446E-05	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr2	61152521	G	A	0.00134	REL	+	FALSE
chr17	1946503	C	G	0.00154	DPH1,OVCA2	+	FALSE
chr1	19585903	G	A	0.00522	MRTO4	+	FALSE	AluJr	SINE,Alu
chr12	56510708	A	G	0.00050	RPL41	+	FALSE
chr9	89626918	A	G	0.00048	LOC440173	-	FALSE
chr2	238678002	C	G	0.00711	LRRFIP1	+	FALSE
chr1	145500920	T	A	0.00286	NBPF20,NBPF10,LIX1L	+	FALSE
chr6	31112484	C	T	0.00538		.	FALSE
chr1	179829508	T	C	0.00048	TOR1AIP2	-	TRUE	AluJr	SINE,Alu
chr1	19542250	T	C	3.30618E-05	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr10	120801786	G	C	0.00752	EIF3A	-	FALSE
chr1	33150598	T	C	4.12722E-05	SYNC,RBBP4	+,-	FALSE
chr19	19792403	A	G	1.20818E-05	ZNF101	+	TRUE	AluJb	SINE,Alu
chr11	6703160	A	T	0.00111	MRPL17	-	FALSE
chr5	130537666	A	G	9.26326E-06	LYRM7	+	TRUE	AluJb	SINE,Alu
chr1	36068369	T	C	0.00012	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	205687351	T	C	2.02150E-05	NUCKS1	-	FALSE	(T)n	SINE,Alu
chr1	44088547	C	A	0.00018	PTPRF	+	FALSE	A-rich	SINE,Alu
chr1	169768080	C	A	5.53708E-05	C1orf112	+	FALSE
chr2	202028727	A	G	0.00833	CFLAR	+	TRUE	AluSx1	SINE,Alu
chr3	5259480	T	A	5.79324E-05	EDEM1	+	FALSE
chr1	27678721	A	G	0.00030	SYTL1	+	TRUE	AluSx1	SINE,Alu
chr1	144606838	A	G	0.00988	NBPF20	+	FALSE
chr1	204526648	A	G	0.00302	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	93803490	T	C	0.00572	CCDC18-AS1	-	FALSE	AluJr	SINE,Alu
chr2	47387306	G	T	0.00026	CALM2	-	FALSE
chr7	99017241	C	A	0.00721	PTCD1,ATP5J2-PTCD1	-	FALSE
chr1	9161218	T	C	0.00641		.	FALSE	AluSx	SINE,Alu
chr1	179326847	A	G	0.00021	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	28835937	A	G	0.00181	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr2	220416942	G	C	0.00100	OBSL1	-	FALSE
chr5	64964623	T	C	1.14652E-05	SGTB	-	TRUE	AluSx1	SINE,Alu
chr5	109190940	T	C	0.00173	MAN2A1	+	FALSE
chr1	145375858	T	C	0.00069	NBPF20,NBPF10	+	FALSE
chr1	156564726	T	C	0.00995	GPATCH4	-	FALSE
chr3	156258319	T	C	0.00012	SSR3	-	TRUE	AluYk3	SINE,Alu
chr16	3207363	C	T	0.00104		.	FALSE
chr1	145512925	A	G	0.00238	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	220231959	T	C	2.75997E-05	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr7	64435684	T	G	0.00239	ZNF117	-	FALSE
chr3	53259329	G	C	0.00036	TKT	-	FALSE
chr4	39551008	T	C	0.00106	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr4	47514685	C	T	2.65771E-05	ATP10D	+	FALSE
chr1	35817023	G	C	0.00547	ZMYM4	+	FALSE
chr1	24022909	T	A	0.00177	RPL11	+	FALSE
chr5	139931622	T	A	0.00881	SRA1	-	FALSE
chr1	222907790	C	T	0.00253	BROX	+	FALSE
chr1	224927968	G	A	0.00695	CNIH3	+	FALSE
chr1	144595935	G	A	0.00837	NBPF20	+	FALSE	AluJb	SINE,Alu
chr15	41590973	A	G	1.61675E-06	OIP5-AS1	+	TRUE	AluSx1	SINE,Alu
chr1	6283332	T	C	6.58989E-06	ICMT	-	TRUE	AluSx3	SINE,Alu
chr3	38566722	T	C	0.00426	EXOG	+	FALSE	MIRb	SINE,Alu
chr3	195411267	A	G	1.93837E-05	SDHAP2	+	FALSE
chr1	154128837	G	T	0.00032	TPM3	-	FALSE
chr1	146651038	T	G	0.00964	PDIA3P1	+	FALSE
chr9	103064530	G	A	0.00036	TEX10	-	FALSE
chr1	90497768	A	G	4.54321E-06	ZNF326	+	TRUE
chr1	109476363	A	G	0.00172	GPSM2,CLCC1	+,-	FALSE
chr7	100271438	G	T	0.00460	GNB2	+	FALSE
chr6	44417136	A	G	0.00274	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	180247477	C	T	0.00060		.	FALSE
chr6	37138024	G	C	0.00892	PIM1	+	FALSE	(GCA)n	SINE,Alu
chr5	53841240	A	G	0.00416	SNX18	+	FALSE
chr1	120612194	C	G	0.00091	NOTCH2	-	FALSE	(CCG)n	SINE,Alu
chr1	36752811	C	T	0.00000	THRAP3	+	FALSE
chr1	10519932	T	C	0.00323		.	FALSE	AluJr	SINE,Alu
chr5	75469427	G	A	0.00155	SV2C	+	FALSE
chr5	52250837	C	T	0.00017		.	FALSE
chr1	28825337	A	G	0.00904	PHACTR4	+	TRUE	AluSg	SINE,Alu
chr3	179117270	T	C	0.00478	GNB4	-	TRUE	AluSz	SINE,Alu
chr3	124688639	C	A	0.00165	HEG1	-	FALSE
chr7	16640491	G	A	0.00478	ANKMY2	-	FALSE
chr2	128952699	A	G	0.00497	UGGT1	+	TRUE	AluSp	SINE,Alu
chr6	118029818	T	G	0.00119	NUS1	+	FALSE
chr4	2940485	T	C	2.93326E-08	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr1	37949806	G	A	2.03247E-05	ZC3H12A	+	FALSE
chr3	196658640	C	T	0.00444	SENP5	+	FALSE
chr1	6583538	T	C	0.00455	NOL9	-	TRUE	AluSq	SINE,Alu
chr1	183187603	C	T	0.00357	LAMC2	+	FALSE
chr15	42550445	T	C	0.00360	TMEM87A	-	FALSE
chr15	55609650	T	C	0.00309	PIGBOS1	-	TRUE	AluSg	SINE,Alu
chr2	37328013	T	C	1.05952E-05		.	FALSE
chr8	25272423	G	T	0.00659	DOCK5	+	FALSE
chr1	23408016	C	A	4.80633E-05	KDM1A	+	FALSE
chr1	62627191	A	G	0.00146	PATJ	+	TRUE	AluSx	SINE,Alu
chr1	201438098	T	G	2.75480E-05	PHLDA3	-	FALSE
chr1	16889563	C	A	0.00037	NBPF1	-	FALSE
chr7	5568366	A	G	0.00400	ACTB	-	FALSE
chr6	97592897	A	C	0.00144	MMS22L	-	FALSE
chr2	88913273	G	C	0.00152	EIF2AK3	-	FALSE
chr2	202031433	A	G	0.00611	CFLAR	+	FALSE	SVA_A	SINE,Alu
chr16	19725719	C	T	0.00471	KNOP1	-	FALSE
chr4	57194712	A	C	0.00399	KIAA1211	+	FALSE
chr2	20648961	T	C	0.00304	RHOB	+	FALSE
chr2	231683849	A	G	0.00786	CAB39	+	FALSE
chr1	38002068	C	T	0.00962	SNIP1	-	FALSE
chr22	36677549	C	T	0.00040	MYH9	-	FALSE
chr1	19542310	T	C	0.00582	LOC101927895,EMC1	+,-	FALSE	AluSz	SINE,Alu
chr9	19376250	A	T	0.00706		.	FALSE
chr2	191067764	A	T	0.00165	C2orf88	+	FALSE
chr1	182353198	A	T	0.00985	GLUL	-	FALSE
chr1	6584872	T	C	9.65243E-06	NOL9	-	TRUE	AluYk2	SINE,Alu
chr1	53289547	A	G	0.00352	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr1	120611960	C	T	0.00062	NOTCH2	-	FALSE
chr1	154128827	A	T	0.00724	TPM3	-	FALSE
chr9	85861561	C	T	0.00287	FRMD3	-	FALSE	(TC)n	SINE,Alu
chr2	8996701	G	T	0.00063	MBOAT2	-	FALSE	AluSz	SINE,Alu
chr2	24223353	A	G	0.00083	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	148004422	T	A	0.00017	NBPF8	-	FALSE
chr20	25428308	A	G	0.00185	GINS1	+	TRUE	AluSz	SINE,Alu
chr5	68858545	C	G	0.00034	GTF2H2C,GTF2H2C_2	+	FALSE	AluSz	SINE,Alu
chr2	201842323	T	C	0.00254	FAM126B	-	TRUE	AluJb	SINE,Alu
chr2	32235359	A	C	0.00664	MEMO1	-	FALSE
chrX	37699364	C	G	0.00695	DYNLT3	-	FALSE
chr2	98388810	G	T	6.24900E-05	TMEM131	-	FALSE
chr1	16945570	A	G	0.00131	CROCCP2	-	FALSE
chr3	127341226	A	G	0.00049	MCM2	+	FALSE
chr2	233446265	T	C	0.00177	EIF4E2	+	FALSE
chr7	22765456	G	T	5.19964E-05	LOC541472	-	FALSE
chr6	31506635	T	G	6.78064E-05		.	FALSE
chr1	1344749	A	G	0.00307		.	FALSE	AluSx1	SINE,Alu
chr7	100031496	T	A	0.00119	MEPCE	+	FALSE
chr1	10520378	T	C	8.57705E-06		.	FALSE	AluSx1	SINE,Alu
chr11	62407518	T	C	3.11115E-06	GANAB	-	TRUE	AluY	SINE,Alu
chr7	115898258	A	T	0.00314	TES	+	FALSE	(T)n	SINE,Alu
chr1	155181396	A	G	0.00209	MTX1	+	FALSE
chr2	25962254	A	T	0.00375	ASXL2	-	FALSE
chr12	133297966	A	G	0.00000	PGAM5	+	FALSE	AluJo	SINE,Alu
chr10	75008815	T	C	0.00309	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	38423181	T	G	0.00793	SF3A3	-	FALSE	AluJo	SINE,Alu
chr1	46164493	T	C	0.00977	IPP	-	TRUE	AluJb	SINE,Alu
chr17	72206017	T	A	6.66319E-05	RPL38	+	FALSE
chr1	85787118	G	C	0.00104	DDAH1	-	FALSE
chr4	763539	G	C	0.00816	PCGF3	+	FALSE
chr3	42266346	A	G	0.00824	TRAK1	+	FALSE
chr2	129024408	G	A	0.00502	HS6ST1	-	FALSE
chr2	64687665	C	A	0.00976	LGALSL	+	FALSE
chr1	53289686	A	G	0.00063	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr4	25236017	T	C	2.76644E-09	PI4K2B	+	FALSE
chr1	1595540	T	C	0.00830	CDK11B,SLC35E2B	-	TRUE	AluJr	SINE,Alu
chr4	165999188	T	C	0.00751	TMEM192	-	TRUE	FLAM_C	SINE,Alu
chr11	93474585	T	G	0.00531	TAF1D	-	FALSE
chr1	148251814	T	A	0.00353	NBPF8,NBPF14,NBPF9	-	FALSE
chr2	206983267	T	C	0.00854		.	FALSE	AluJb	SINE,Alu
chrX	77083116	T	C	0.00658	MAGT1	-	TRUE	AluSg	SINE,Alu
chr3	66430372	T	A	0.00300	LRIG1	-	FALSE
chr5	125962176	A	G	0.00020	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	23636277	A	T	0.00188	HNRNPR	-	FALSE
chr1	21810586	C	T	0.00540	NBPF3	+	FALSE
chr1	36067760	T	C	0.00052	PSMB2	-	TRUE	AluSz	SINE,Alu
chr6	153292179	T	C	0.00755	FBXO5	-	FALSE
chr1	179852074	T	C	0.00309	TOR1AIP1	+	FALSE
chr1	53289688	A	G	5.35400E-06	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr19	58361328	G	C	0.00972	ZNF587	+	FALSE
chr5	154194476	T	A	0.00611	LARP1	+	FALSE
chr2	113513825	T	C	2.13681E-05	CKAP2L	-	FALSE
chr1	154557171	G	A	0.00329	ADAR	-	FALSE	A-rich	SINE,Alu
chr1	59142713	T	C	0.00246	MYSM1	-	FALSE
chr2	37330614	T	C	0.00410		.	FALSE	AluSq2	SINE,Alu
chr3	73115786	T	C	3.88619E-05	PPP4R2	+	FALSE
chr1	235715523	A	G	0.00660	GNG4	-	FALSE
chr3	122283292	C	G	0.00047	DTX3L,PARP9	+,-	FALSE
chr17	78226862	A	C	0.00590	SLC26A11	+	FALSE
chr6	42981526	C	G	0.00129	MEA1	-	FALSE
chr1	1419700	A	G	0.00464	ATAD3B	+	TRUE	AluYk2	SINE,Alu
chr1	145689717	A	G	3.41980E-05	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr6	108214773	C	T	0.00265	SEC63	-	FALSE
chr2	68402794	T	G	0.00630	PNO1	+	FALSE
chr8	11700444	C	G	0.00042	CTSB	-	FALSE	AluSq2	SINE,Alu
chr1	19238556	G	A	6.03260E-07	IFFO2	-	FALSE
chr6	52860743	T	G	1.01575E-05		.	FALSE	7SK	SINE,Alu
chr2	20648946	C	T	0.00531	RHOB	+	FALSE
chr3	176739158	C	A	0.00612	TBL1XR1	-	FALSE
chr2	224621887	T	C	0.00373	AP1S3	-	FALSE	AluSc	SINE,Alu
chr4	89179595	T	C	0.00752	PPM1K	-	TRUE	AluSc	SINE,Alu
chr1	179044242	A	G	0.00335	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	32669918	G	A	0.00639	CCDC28B	+	FALSE
chr5	125961649	A	G	3.29658E-05	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	145512944	A	G	0.00110	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr7	17384880	A	G	0.00027	AHR	+	TRUE	AluSc	SINE,Alu
chr1	1647902	A	T	0.00191	CDK11B,CDK11A	-	FALSE
chr1	85785107	T	C	4.02203E-05	DDAH1	-	FALSE
chr15	41590287	A	G	0.00319	OIP5-AS1	+	FALSE
chr4	7762675	C	T	3.92312E-07	AFAP1,AFAP1-AS1	+,-	FALSE
chr1	87213188	C	A	0.00236	SH3GLB1	+	FALSE
chr1	25644747	T	C	0.00972	RSRP1,RHD	+,-	FALSE	AluSx1	SINE,Alu
chr5	478174	C	T	0.00392	SLC9A3,LOC100288152	+,-	FALSE
chr1	1325721	C	T	0.00471	CCNL2	-	FALSE
chr20	18468511	T	C	0.00129	RBBP9	-	TRUE	AluSz6	SINE,Alu
chr1	27107669	T	A	0.00636	ARID1A	+	FALSE	(A)n	SINE,Alu
chr17	7760704	A	G	0.00297	NAA38	-	FALSE
chr1	211921702	T	C	1.94235E-05	LPGAT1	-	FALSE
chr1	47099235	A	C	0.00919		.	FALSE
chr9	86584220	G	A	0.00318	HNRNPK	-	FALSE
chr1	45976265	A	G	0.00657	MMACHC	+	FALSE
chr1	160967833	T	C	6.62581E-12	F11R	-	TRUE	AluSp	SINE,Alu
chr1	229738170	T	G	0.00168	TAF5L	-	FALSE
chr1	19586501	A	G	2.56701E-06	MRTO4	+	TRUE	AluSz	SINE,Alu
chr1	116609185	G	A	0.00187	SLC22A15	+	FALSE
chr1	67896040	G	A	1.31286E-05	SERBP1	-	FALSE
chr1	1169728	G	T	0.00745	B3GALT6	+	FALSE
chr1	156518379	G	A	0.00498	IQGAP3	-	FALSE
chr1	44072066	C	T	0.00846	PTPRF	+	FALSE
chr4	17803009	T	C	0.00062	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	118066459	A	G	1.18472E-05	MAN1A2	+	FALSE
chr11	8707397	T	A	0.00046	RPL27A	+	FALSE
chr1	223178477	C	T	0.00519	DISP1	+	FALSE
chr2	112252629	A	C	0.00107	MIR4435-2HG	-	FALSE
chr1	19953120	G	A	0.00024	MINOS1,MINOS1-NBL1	+	FALSE
chr1	46075783	A	G	0.00755	NASP	+	TRUE	AluSx4	SINE,Alu
chr2	120022387	C	T	0.00728	STEAP3	+	FALSE
chr1	184761350	T	C	0.00219	FAM129A	-	TRUE	AluJo	SINE,Alu
chr5	154194456	G	C	0.00831	LARP1	+	FALSE

RBP	NPM1
Knock-Method	shRNA
RBP Family	Nucleoplasmin
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR016XPB
Platform	HiSeq
Pubmed ID	32252787

NPM1 - Target Gene Network