RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr3	40503557	T	C	0.00487	RPL14	+	FALSE
chr3	109045430	G	A	4.43689E-05	DPPA4	-	FALSE
chr2	74332837	G	T	4.72839E-05	TET3	+	FALSE
chr2	120439459	C	A	0.00273	TMEM177	+	FALSE
chr1	33148635	A	G	5.17667E-05	SYNC,RBBP4	+,-	FALSE	AluSc	SINE,Alu
chr1	115313051	T	C	0.00853	SIKE1	-	FALSE
chr2	86365817	A	G	0.00046	PTCD3	+	FALSE
chr3	172115474	A	G	0.00012	FNDC3B	+	FALSE	(A)n	SINE,Alu
chr1	86047210	C	T	0.00201	CYR61	+	FALSE
chr1	1594977	T	C	0.00075	CDK11B,SLC35E2B	-	TRUE	AluSg	SINE,Alu
chr3	10168802	A	G	6.92223E-05	BRK1	+	FALSE
chr2	99812398	A	G	0.00019	MRPL30	+	TRUE	AluSx	SINE,Alu
chr19	18306990	G	C	0.00090	MPV17L2	+	FALSE
chr12	9098987	T	A	0.00180	M6PR	-	FALSE
chr12	27953267	T	G	0.00233	KLHL42	+	FALSE
chr5	56177846	G	C	0.00952	MAP3K1	+	FALSE
chr1	46830110	A	G	0.00283	NSUN4	+	TRUE	AluSx1	SINE,Alu
chr10	119766673	T	G	0.00082	RAB11FIP2	-	FALSE
chr2	118854108	A	T	0.00568	INSIG2	+	FALSE
chr1	203709034	A	G	0.00049	ATP2B4	+	FALSE
chr17	19091395	C	T	0.00852		.	FALSE	U3	SINE,Alu
chrX	73421601	T	C	0.00219	FTX	-	TRUE	L1MB7	SINE,Alu
chr1	10437995	G	A	0.00427	KIF1B	+	FALSE	AluSg	SINE,Alu
chr14	19686683	G	A	0.00021	DUXAP10	+	FALSE
chr1	204521580	A	G	0.00169	MDM4	+	TRUE	AluSg	SINE,Alu
chr7	38764464	T	C	0.00193	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	10517314	T	C	8.82505E-05		.	FALSE	AluJr	SINE,Alu
chr3	38296817	G	A	3.46922E-11	OXSR1	+	FALSE
chr19	10795968	C	T	0.00700	ILF3	+	FALSE
chr1	87170493	T	G	0.00345	SH3GLB1	+	FALSE
chr1	10518734	T	C	0.00143		.	FALSE	AluSx1	SINE,Alu
chr19	58374130	C	T	0.00124	ZNF587	+	FALSE
chr5	37290323	T	C	0.00029		.	FALSE	AluSz	SINE,Alu
chr1	955597	G	T	3.81431E-06	AGRN	+	FALSE
chr1	202697335	G	A	0.00374	KDM5B	-	FALSE
chr1	85742155	G	A	0.00813	BCL10,LOC646626	+,-	FALSE
chr4	139088295	C	T	0.00537	SLC7A11-AS1,SLC7A11	+,-	FALSE
chr1	179042687	A	G	0.00782	FAM20B	+	TRUE	AluSx1	SINE,Alu
chr2	37331531	T	C	0.00063		.	FALSE	AluJb	SINE,Alu
chr3	195411239	A	C	5.03065E-05	SDHAP2	+	FALSE
chr1	16918734	G	C	0.00083	NBPF1	-	FALSE
chr1	28835201	C	T	0.00371	SNHG3,RCC1,SNORA73B	+	FALSE	U17	SINE,Alu
chr16	31469051	T	C	0.00278		.	FALSE	AluSz	SINE,Alu
chr19	18124755	A	G	0.00480	ARRDC2	+	FALSE
chr2	47387306	G	T	0.00026	CALM2	-	FALSE
chr3	44839350	A	C	0.00837	KIF15	+	FALSE
chr1	45975670	A	G	0.00530	MMACHC	+	TRUE	AluSx4	SINE,Alu
chr1	145512141	A	G	0.00215	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr11	118947634	C	T	0.00276	VPS11	+	FALSE
chr1	247319704	T	A	0.00053	ZNF124	-	FALSE
chr1	10520702	T	C	0.00438	DFFA	-	TRUE	AluSc8	SINE,Alu
chr20	29631627	T	C	0.00040	FRG1BP	+	FALSE
chr1	33086876	T	C	0.00075	ZBTB8OS	-	TRUE	AluY	SINE,Alu
chr1	145369354	C	T	0.00872	NBPF20,NBPF10	+	FALSE
chr7	29961437	T	G	6.91541E-06	SCRN1	-	FALSE
chr1	54691922	T	A	0.00415	SSBP3	-	FALSE
chr17	8378932	A	G	0.00372	MYH10	-	FALSE
chr6	109784327	T	C	2.38076E-05	MICAL1,ZBTB24	-	TRUE	AluSg	SINE,Alu
chr18	2804129	G	A	0.00157	SMCHD1	+	FALSE
chr11	75116734	C	A	0.00453	RPS3	+	FALSE
chr2	69689699	T	C	0.00800	AAK1	-	TRUE	AluSg	SINE,Alu
chr1	145689491	A	G	0.00701	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr17	5288079	A	C	0.00085	RABEP1	+	FALSE
chr1	144851537	A	G	0.00275	NBPF20,PDE4DIP	+,-	FALSE
chr3	19992432	G	T	0.00017	RAB5A	+	FALSE
chr1	201846627	A	T	0.00571	IPO9	+	FALSE	(CA)n	SINE,Alu
chr15	31619607	G	A	0.00887	KLF13	+	FALSE
chr1	168218522	A	G	0.00153		.	FALSE	AluSz	SINE,Alu
chr1	10519910	T	C	7.27344E-07		.	FALSE	AluJr	SINE,Alu
chr3	33430398	T	A	0.00025	UBP1	-	FALSE
chr1	19198414	G	A	0.00028	ALDH4A1	-	FALSE
chr2	37330431	T	C	0.00231		.	FALSE	AluSq2	SINE,Alu
chr16	69151495	T	A	0.00304	HAS3	+	FALSE	(T)n	SINE,Alu
chr17	12915009	G	A	0.00219	ELAC2	-	FALSE
chr2	10179657	A	C	0.00035		.	FALSE	L1ME4b	SINE,Alu
chr1	86816600	A	G	0.00830	ODF2L	-	FALSE	L1PA7	SINE,Alu
chr1	10520117	T	C	0.00188		.	FALSE	AluSx	SINE,Alu
chr7	128169979	T	G	0.00569		.	FALSE
chr1	78414308	T	C	0.00024	FUBP1	-	FALSE
chr5	40832548	A	T	0.00048	RPL37	-	FALSE
chr1	46828657	C	T	0.00378	NSUN4	+	FALSE
chr5	41917696	T	A	0.00045	C5orf51	+	FALSE
chr3	141667460	T	G	0.00193	TFDP2	-	FALSE
chrX	16782947	A	G	0.00225		.	FALSE	AluJb	SINE,Alu
chr1	27877418	G	A	0.00347	AHDC1	-	FALSE
chr2	11321880	C	T	0.00064	ROCK2	-	FALSE	AluSx1	SINE,Alu
chr1	26450101	A	G	0.00764	PDIK1L	+	FALSE
chr14	75202373	A	G	0.00019	FCF1	+	FALSE	AluSc	SINE,Alu
chr5	1317949	C	T	0.00173	CLPTM1L	-	FALSE
chr1	10521238	T	C	0.00795	DFFA	-	TRUE	AluY	SINE,Alu
chr14	75202669	A	G	1.13156E-05	FCF1	+	TRUE	AluSc	SINE,Alu
chr1	10043053	A	G	0.00042	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr3	120046117	G	T	0.00443	LRRC58	-	FALSE	AluYi6	SINE,Alu
chr1	1683565	G	A	7.19943E-05	NADK	-	FALSE
chr12	69237077	A	G	0.00445	MDM2	+	TRUE	(GA)n	SINE,Alu
chr1	1252248	A	G	0.00503	CPSF3L	-	FALSE	AluSx	SINE,Alu
chr16	81064560	A	G	0.00014	CENPN	+	TRUE	AluSg	SINE,Alu
chr4	2516791	T	G	4.75740E-05	RNF4	+	FALSE
chr1	24798520	A	C	0.00110	NIPAL3	+	FALSE
chr3	186505900	T	G	1.87786E-07	EIF4A2	+	FALSE
chr1	45452227	G	C	0.00046	EIF2B3	-	FALSE
chr2	37331855	C	T	0.00965		.	FALSE	L1MC4	SINE,Alu
chr1	156233189	C	T	5.51743E-05	SMG5	-	FALSE
chr2	217366868	A	G	0.00100		.	FALSE	AluSz6	SINE,Alu
chr1	10221302	G	A	0.00119	UBE4B	+	FALSE
chr2	37429627	A	G	7.56792E-05	CEBPZOS,CEBPZ	+,-	FALSE	AluSz	SINE,Alu
chr8	128752685	G	A	2.94991E-09	MYC	+	FALSE
chr2	37331525	T	C	0.00020		.	FALSE	AluJb	SINE,Alu
chr1	145512166	T	A	0.00823	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr2	37331565	T	C	0.00121		.	FALSE	AluJb	SINE,Alu
chr1	24134721	T	C	0.00448	HMGCL	-	FALSE
chr2	219433597	G	A	0.00328	CNOT9	+	FALSE
chr3	195411498	G	A	0.00722	SDHAP2	+	FALSE
chr1	165877575	A	C	0.00839	UCK2	+	FALSE
chr3	53260620	T	G	0.00069	TKT	-	FALSE
chr12	98943201	A	G	9.51066E-07	TMPO	+	TRUE	AluSz	SINE,Alu
chr1	3545200	G	A	0.00381	TPRG1L	+	FALSE
chr4	17803026	T	C	0.00396	DCAF16	-	TRUE	AluSz	SINE,Alu
chr1	151966348	C	T	0.00511	S100A10	-	FALSE
chr1	900725	T	G	0.00110	KLHL17	+	FALSE	(TTTA)n	SINE,Alu
chr2	102484205	T	A	0.00434	MAP4K4	+	FALSE
chr1	55207985	G	A	0.00156	MROH7-TTC4,TTC4	+	FALSE
chr3	160286646	C	T	0.00086		.	FALSE
chr1	20976589	C	T	0.00125	PINK1,PINK1-AS	+,-	FALSE
chr15	44751350	C	T	0.00260	CTDSPL2	+	FALSE
chr1	236717926	T	C	0.00029	HEATR1	-	FALSE
chr1	19953120	G	A	0.00024	MINOS1,MINOS1-NBL1	+	FALSE
chr2	201774264	T	C	0.00099		.	FALSE	AluSz	SINE,Alu
chr1	26161129	A	C	0.00607	AUNIP	-	FALSE
chr2	217498311	T	C	0.00977	IGFBP2	+	FALSE	(CCG)n	SINE,Alu
chr1	10520145	T	C	0.00424		.	FALSE	AluSx	SINE,Alu
chr17	65335445	T	C	0.00084	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	46076599	A	G	0.00116	NASP	+	TRUE	AluSx	SINE,Alu
chr1	28835937	A	G	2.00244E-07	SNHG3,RCC1	+	TRUE	AluSx4	SINE,Alu
chr1	94351062	T	A	0.00676	GCLM	-	FALSE
chr1	19542631	T	C	0.00176	LOC101927895,EMC1	+,-	FALSE	FRAM	SINE,Alu
chr3	156259331	T	C	0.00088	SSR3	-	TRUE	AluSq2	SINE,Alu
chr1	211921723	A	G	4.36683E-06	LPGAT1	-	FALSE
chr2	37328013	T	C	0.00010		.	FALSE
chr3	17201882	C	T	0.00259	TBC1D5	-	FALSE
chr2	675831	G	T	0.00731	TMEM18	-	FALSE
chr2	91805938	A	G	0.00084		.	FALSE	MLT1H1	SINE,Alu
chr2	32535287	A	G	0.00891		.	FALSE	FLAM_C	SINE,Alu
chr5	34906692	T	C	0.00021	RAD1	-	TRUE	AluJo	SINE,Alu
chr1	11347155	C	T	0.00273	UBIAD1	+	FALSE
chr1	193054154	G	A	0.00757	TROVE2	+	FALSE
chr1	32661578	C	T	0.00623	TXLNA	+	FALSE	(T)n	SINE,Alu
chr2	37328008	T	C	1.98312E-07		.	FALSE
chr7	5107572	A	C	0.00563	RBAK-RBAKDN,RBAK	+	FALSE	L1ME3A	SINE,Alu
chr1	16932912	T	C	0.00808	NBPF1	-	FALSE	L1MC2	SINE,Alu
chr1	19543349	T	C	0.00060	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr3	125248854	A	C	0.00014	OSBPL11	-	FALSE
chr3	127341226	A	G	0.00049	MCM2	+	FALSE
chr1	201975173	G	T	0.00356	RNPEP	+	FALSE
chr15	41597437	T	A	0.00217		.	FALSE	AluSz6	SINE,Alu
chr1	205737665	G	T	0.00078	RAB29	-	FALSE	AluSq2	SINE,Alu
chr12	32794600	A	C	5.34959E-05	FGD4	+	FALSE
chr5	68788642	G	C	3.71778E-05	OCLN	+	FALSE
chr14	105270478	G	T	0.00252	ZBTB42	+	FALSE
chr5	180663939	C	A	0.00522	RACK1	-	FALSE
chr1	33149496	A	G	0.00469	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr12	120898998	A	G	0.00081	GATC	+	TRUE	AluJr	SINE,Alu
chr1	26449336	A	G	0.00343	PDIK1L	+	FALSE
chr1	33149495	A	G	0.00421	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr1	9161142	T	C	8.95302E-05		.	FALSE	AluSx	SINE,Alu
chr5	125961647	A	G	1.53189E-07	PHAX	+	FALSE	AluSz6	SINE,Alu
chr3	120115286	T	G	0.00077	FSTL1	-	FALSE
chr4	17626174	T	A	0.00534	MED28	+	FALSE
chr3	73116437	C	G	1.00237E-05	PPP4R2	+	FALSE
chr7	197322	A	G	2.25895E-09	FAM20C	+	FALSE
chr1	26449882	A	G	0.00783	PDIK1L	+	FALSE
chr1	54692674	A	G	0.00864	SSBP3	-	FALSE
chr11	76733943	A	G	0.00925	ACER3	+	FALSE	A-rich	SINE,Alu
chr1	53365235	G	C	0.00029	ECHDC2	-	FALSE
chr1	24296874	G	A	0.00627		.	FALSE	AluSg	SINE,Alu
chr1	27992800	C	A	5.71645E-05	IFI6	-	FALSE	FAM	SINE,Alu
chr1	53289686	A	G	0.00222	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr3	64081236	T	C	8.95068E-05	PRICKLE2,PRICKLE2-AS1	+,-	FALSE
chr3	140695493	C	A	0.00559	SLC25A36	+	FALSE
chr1	35650022	C	A	0.00762	SFPQ	-	FALSE
chr19	42376710	A	G	1.82395E-05		.	FALSE	AluSp	SINE,Alu
chr2	37331221	T	C	1.68149E-05		.	FALSE	AluSx1	SINE,Alu
chr1	156692054	A	T	0.00471	ISG20L2	-	FALSE	AluY	SINE,Alu
chr3	58306797	A	G	8.72021E-05		.	FALSE	AluSz	SINE,Alu
chr1	11181327	C	T	0.00525	MTOR	-	FALSE
chr1	1152309	A	T	0.00030	SDF4	-	FALSE
chr6	42855954	A	G	0.00190	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr2	215674224	G	A	9.97816E-05	BARD1	-	FALSE
chr8	144684474	T	C	0.00058		.	FALSE
chr3	179115697	T	C	3.71610E-05	GNB4	-	TRUE	AluSg7	SINE,Alu
chr1	74665493	G	A	0.00128	FPGT-TNNI3K,FPGT	+	FALSE
chr1	27107948	G	A	0.00177	ARID1A	+	FALSE
chr16	9204015	C	T	0.00325	C16orf72	+	FALSE
chr10	72187740	C	A	0.00668	EIF4EBP2	+	FALSE
chr6	31321916	A	G	0.00000		.	FALSE
chr3	56654600	C	G	0.00490	CCDC66,FAM208A	+,-	FALSE
chr5	130536847	A	G	0.00917	LYRM7	+	TRUE	AluSx4	SINE,Alu
chr2	220370192	C	T	0.00055	GMPPA	+	FALSE
chr3	66430372	T	A	0.00300	LRIG1	-	FALSE
chr1	53291420	A	G	0.00011	ZYG11B	+	TRUE	AluJr	SINE,Alu
chr1	241796950	C	A	1.24743E-05	OPN3,CHML	-	FALSE
chr17	73774199	C	T	0.00056	H3F3B	-	FALSE
chr2	206981856	T	C	0.00174		.	FALSE	AluJb	SINE,Alu
chr3	50296329	G	A	0.00884	GNAI2	+	FALSE
chr8	37351214	T	C	0.00109	LINC01605	-	FALSE
chr19	21131571	A	G	0.00120	ZNF85	+	FALSE
chr1	204526631	A	G	0.00536	MDM4	+	TRUE	AluSx	SINE,Alu
chr12	125511952	A	G	0.00138	THRIL	-	FALSE	AluSx1	SINE,Alu
chr19	13883548	A	G	0.00566	MRI1	+	TRUE	AluYk3	SINE,Alu
chr1	168213413	T	C	0.00733		.	FALSE	AluSx1	SINE,Alu
chr4	13583889	T	C	2.08207E-10	BOD1L1	-	FALSE
chr2	20401859	A	T	0.00930	SDC1	-	FALSE	(A)n	SINE,Alu
chr5	95223443	C	T	0.00255	ELL2	-	FALSE
chr5	17276080	A	C	0.00298	BASP1	+	FALSE	(TC)n	SINE,Alu
chr1	46075783	A	G	0.00755	NASP	+	TRUE	AluSx4	SINE,Alu
chr4	49591495	G	C	0.00893		.	FALSE
chr1	160967899	T	C	0.00011	F11R	-	TRUE	AluSp	SINE,Alu
chr1	32373437	G	A	1.22125E-14	PTP4A2	-	FALSE
chr1	53359745	A	G	0.00661	ZYG11A	+	TRUE	AluSx4	SINE,Alu
chr4	177252238	A	G	9.63526E-05	SPCS3	+	TRUE
chr3	10192652	A	G	0.00155	VHL	+	TRUE	AluSx1	SINE,Alu
chr2	196999052	C	G	0.00358	STK17B	-	FALSE	MER1B	SINE,Alu
chr4	17802955	T	C	0.00071	DCAF16	-	FALSE	AluSz	SINE,Alu
chr4	2517223	A	G	2.74855E-08	RNF4	+	FALSE
chr3	183534913	A	G	0.00367	MAP6D1	-	FALSE
chr1	36921372	A	T	0.00259	MRPS15	-	FALSE
chr1	27216740	G	A	0.00801	GPN2	-	FALSE
chr12	123346999	T	A	0.00838	HIP1R	+	FALSE
chr1	101444791	C	T	0.00268	SLC30A7	+	FALSE
chr1	110596569	G	A	0.00867	STRIP1	+	FALSE
chr1	25890189	A	G	0.00961	LDLRAP1	+	FALSE
chr2	217366897	A	G	0.00440		.	FALSE	AluSz6	SINE,Alu
chr4	189020293	G	A	0.00361	TRIML2	-	FALSE
chr4	6677063	G	A	0.00087	LOC93622	+	FALSE
chr8	12283440	A	G	0.00041	FAM86B2	-	FALSE
chr1	112003957	G	A	0.01000	ATP5F1	+	FALSE	Helitron2Na_Mam	SINE,Alu
chr3	10192717	A	G	3.16601E-05	VHL	+	TRUE	AluSx1	SINE,Alu
chr1	7827697	G	C	0.00760	CAMTA1	+	FALSE
chr1	28920925	A	G	0.00294	RAB42	+	TRUE	AluSx	SINE,Alu
chr2	128602500	T	C	4.07621E-06		.	FALSE	AluSq2	SINE,Alu
chr1	51873951	G	A	0.00588	EPS15	-	FALSE
chr1	36770600	G	T	0.00792	THRAP3	+	FALSE	(T)n	SINE,Alu
chr1	55207982	C	A	0.00063	MROH7-TTC4,TTC4	+	FALSE
chr1	1337334	G	T	0.00549	LOC148413,MRPL20	+,-	FALSE
chr1	145688665	T	A	0.00015	NBPF20,NBPF10,RNF115	+	FALSE
chr1	54493259	T	C	0.00203	TMEM59	-	TRUE	AluSz6	SINE,Alu
chr1	206635245	T	C	0.00238	SRGAP2	+	FALSE
chr6	52269046	C	G	0.00338	PAQR8	+	FALSE
chr1	28785729	G	A	0.00181	PHACTR4	+	FALSE
chr1	119693495	A	G	0.00996	LOC101929147	+	TRUE	AluSx	SINE,Alu
chr2	74442431	T	G	0.00375		.	FALSE
chr1	6311399	A	G	0.00126	GPR153	-	FALSE
chr1	89570148	A	G	0.00084		.	FALSE
chr3	73116345	T	A	5.66390E-05	PPP4R2	+	FALSE
chr1	59123655	C	T	0.00655	MYSM1	-	FALSE
chr4	120216206	C	T	0.00205	USP53	+	FALSE
chr1	9416574	A	G	0.00144	SPSB1	+	FALSE
chr12	124146095	A	G	0.00431	GTF2H3	+	TRUE	AluSx4	SINE,Alu
chr19	50410816	G	T	0.00050	IL4I1,NUP62	-	FALSE	AluSz	SINE,Alu
chr2	191799592	A	G	2.07606E-11	GLS	+	TRUE
chr1	71531596	A	G	0.00016	ZRANB2-AS1,ZRANB2	+,-	FALSE
chr1	10520296	T	C	0.00299		.	FALSE	AluSx	SINE,Alu
chr19	4654601	A	G	0.00016	TNFAIP8L1	+	TRUE	AluJb	SINE,Alu
chr16	1411036	A	G	0.00766	GNPTG	+	TRUE	AluSz	SINE,Alu
chr1	16259813	A	G	0.00475	SPEN	+	FALSE
chr2	61764916	A	C	0.00189	XPO1	-	FALSE	(AC)n	SINE,Alu
chr1	1593857	T	C	0.00217	CDK11B,SLC35E2B	-	FALSE
chr3	45960557	C	T	1.72644E-06	FYCO1	-	FALSE
chr1	42008521	G	T	0.00882	HIVEP3	-	FALSE
chr7	6063466	T	A	0.00153	EIF2AK1	-	FALSE
chr3	195435168	T	G	0.00111	LINC00969	+	FALSE
chr3	28390351	A	G	1.14010E-06	AZI2	-	FALSE
chr2	32535691	A	G	0.00023		.	FALSE	AluJb	SINE,Alu
chr1	145689537	A	G	0.00028	NBPF20,NBPF10	+	TRUE	AluSg	SINE,Alu
chr4	73922981	T	C	0.00491	COX18	-	TRUE	AluSz	SINE,Alu
chr2	27315252	G	A	0.00377	KHK	+	FALSE
chr1	6283264	T	C	0.00073	ICMT	-	TRUE	AluSx3	SINE,Alu
chr17	37005835	T	C	2.39380E-05		.	FALSE	AluSg	SINE,Alu
chr1	24296869	G	T	0.00973		.	FALSE	AluSg	SINE,Alu
chr1	36770602	T	G	0.00441	THRAP3	+	FALSE	(T)n	SINE,Alu
chr20	279774	A	C	0.00056	ZCCHC3	+	FALSE	L2b	SINE,Alu
chr1	31344628	T	A	0.00085	SDC3	-	FALSE
chr9	19376249	G	T	0.00658		.	FALSE
chr3	101284940	T	C	8.16697E-05	TRMT10C	+	FALSE
chr1	161559407	A	G	0.00376	FCGR2C	+	FALSE
chrX	77083952	T	C	0.00045	MAGT1	-	TRUE	AluSz	SINE,Alu
chr1	10517306	T	C	0.00022		.	FALSE	AluJr	SINE,Alu
chr3	155660873	A	G	0.00018		.	FALSE	AluSz	SINE,Alu
chr1	236716959	C	T	0.00727	HEATR1	-	FALSE
chr5	141691255	C	A	0.00323	SPRY4	-	FALSE
chr1	16890639	C	T	0.00095	NBPF1	-	FALSE
chr9	136209404	G	A	0.00361	MED22	-	FALSE	(CAGGG)n	SINE,Alu
chr1	32697109	A	G	0.00015	EIF3I	+	FALSE	AluSp	SINE,Alu
chr2	29170763	G	A	5.21672E-05	WDR43	+	FALSE
chr4	3769307	C	A	0.00173	ADRA2C	+	FALSE
chr1	22419433	T	G	0.00200	CDC42	+	FALSE
chr1	148251814	T	A	0.00353	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	45975345	A	G	0.00071	MMACHC	+	TRUE	AluSg7	SINE,Alu
chr1	92862896	A	G	6.86172E-05		.	FALSE	AluJr	SINE,Alu
chr1	205683407	T	A	0.00034	NUCKS1	-	FALSE
chr1	10368092	A	C	0.00945	KIF1B	+	FALSE
chr2	37331107	T	C	0.00020		.	FALSE	AluSx1	SINE,Alu
chr9	115936771	C	T	1.86133E-10	FKBP15	-	FALSE
chr2	86251114	T	C	0.00709		.	FALSE	AluSx	SINE,Alu
chr4	7761286	T	C	8.48634E-10	AFAP1,AFAP1-AS1	+,-	FALSE
chr6	150046484	T	C	0.00953	NUP43	-	TRUE	AluSq2	SINE,Alu
chr2	75888160	A	C	0.00368	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr2	99812876	A	G	0.00394	MRPL30	+	TRUE	AluJb	SINE,Alu
chr7	135285707	G	A	0.00084	NUP205	+	FALSE
chr1	9161231	T	C	0.00481		.	FALSE	AluSx	SINE,Alu
chr1	52306079	T	A	0.00033	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr8	23294732	C	T	0.00415	ENTPD4	-	FALSE
chr1	10517623	T	C	8.06723E-05		.	FALSE	AluSx1	SINE,Alu
chr1	26608014	C	A	1.07737E-06		.	FALSE
chr8	128944712	A	C	0.00033	PVT1	+	FALSE
chr2	32535865	A	G	0.00684		.	FALSE	AluJb	SINE,Alu
chr1	9326888	T	C	0.00887	H6PD	+	FALSE	AluSx1	SINE,Alu
chr1	26765033	A	G	0.00324	DHDDS	+	TRUE	AluJr	SINE,Alu
chr2	64119875	G	A	0.00781	VPS54	-	FALSE
chr1	3416449	C	A	0.00748	MEGF6	-	FALSE
chr3	121507231	A	T	0.00042	IQCB1	-	FALSE
chr7	64435685	A	T	0.00239	ZNF117	-	FALSE
chr2	172412829	T	A	0.00477	CYBRD1	+	FALSE
chr1	55316322	A	G	0.00172	DHCR24	-	FALSE
chr1	39549983	G	A	0.00896	MACF1	+	FALSE
chr10	75008847	T	C	0.00349	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr1	1252513	T	C	0.00013	CPSF3L	-	TRUE	AluSp	SINE,Alu
chr16	81064440	A	G	0.00409	CENPN	+	TRUE	AluSg	SINE,Alu
chr5	149823794	G	T	0.00204	RPS14	-	FALSE
chr6	42849746	A	G	0.00042	RPL7L1	+	TRUE	AluSz	SINE,Alu
chr1	205737659	C	T	0.00024	RAB29	-	FALSE	AluSq2	SINE,Alu
chr1	29446554	C	A	0.00682	EPB41,TMEM200B	+,-	FALSE
chr8	30536544	T	C	5.33169E-07	GSR	-	TRUE	AluSp	SINE,Alu
chr1	207942472	A	G	2.11430E-05	CD46	+	TRUE	AluSg4	SINE,Alu
chr7	55433884	A	C	0.00723	LANCL2	+	FALSE
chr15	85185205	T	C	0.00459	WDR73,SCAND2P	+,-	FALSE	FLAM_C	SINE,Alu
chr17	43364293	C	G	0.00144	MAP3K14	-	FALSE
chr11	94863483	C	T	0.00501	ENDOD1	+	FALSE
chr1	179070646	T	C	0.00283	ABL2	-	TRUE	AluSz	SINE,Alu
chr6	44417142	A	G	0.00144	CDC5L	+	TRUE	FLAM_C	SINE,Alu
chr1	145689798	A	G	0.00200	NBPF20,NBPF10	+	TRUE	AluJb	SINE,Alu
chr1	154128839	G	T	0.00534	TPM3	-	FALSE
chr1	36068231	T	C	0.00022	PSMB2	-	TRUE	AluSc	SINE,Alu
chr2	86252038	T	C	0.00453	POLR1A	-	TRUE	AluSq2	SINE,Alu
chr1	1534826	C	T	0.00382	FNDC10	-	FALSE
chr5	126889370	C	T	0.00713	PRRC1	+	FALSE
chr1	52520867	T	A	0.00206	TXNDC12	-	FALSE
chr3	141879765	T	C	0.00212	GK5	-	TRUE	AluJr	SINE,Alu
chr1	1595602	A	G	9.14189E-05	CDK11B,SLC35E2B	-	FALSE	AluJr	SINE,Alu
chr3	195964298	A	G	0.00263		.	FALSE
chr11	68523016	T	C	0.00016	CPT1A	-	TRUE	AluY	SINE,Alu
chr1	145281656	A	T	0.00202	NBPF20,NOTCH2NL	+	FALSE
chr1	146033660	C	A	0.00091	NBPF20,NBPF10,NBPF25P,NBPF11	+,-	FALSE
chr9	139299673	G	C	0.00710	SDCCAG3	-	FALSE
chr1	186370281	C	G	0.00387	C1orf27,OCLM	+	FALSE
chr1	16893721	A	C	0.00179	NBPF1	-	FALSE
chr1	12401868	A	C	0.00526	VPS13D	+	FALSE
chr7	44917291	T	C	0.00019	PURB	-	TRUE	AluSz	SINE,Alu
chr1	207219603	T	C	0.00341	YOD1	-	FALSE
chr1	31732601	A	T	0.00479	SNRNP40	-	FALSE
chr1	204524400	A	G	0.00029	MDM4	+	TRUE	AluY	SINE,Alu
chr1	210004199	C	G	0.00531	DIEXF	+	FALSE

RBP	DDX47
Knock-Method	shRNA
RBP Family	DEAD
Biosample Name	HepG2
Tissue Type	Liver
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR388CNS
Platform	HiSeq
Pubmed ID	32252787

DDX47 - Target Gene Network