RBPFunction

Differential Variants in RNA (DVRs)

Chrom	Site	Ref_allele	Alt_allele	Pvalue	Genename	Strand	KnownRNAediting	RepeatName	RepeatFamily
chr1	26143731	A	G	0.00337	SEPN1	+	FALSE	AluSx	SINE,Alu
chr2	37331855	C	T	0.00965		.	FALSE	L1MC4	SINE,Alu
chr1	242012149	C	T	0.00334	EXO1	+	FALSE
chr1	6282400	T	C	0.00118	ICMT	-	TRUE	AluSz	SINE,Alu
chr3	120115286	T	G	0.00077	FSTL1	-	FALSE
chr3	12942851	C	G	0.00013	IQSEC1	-	FALSE
chr1	26451672	T	C	0.00912	PDIK1L	+	FALSE
chr1	36067870	T	C	0.00513	PSMB2	-	TRUE	AluSz	SINE,Alu
chr2	37328097	T	C	0.00301		.	FALSE
chr10	63954812	A	C	0.00641	RTKN2	-	FALSE
chr3	12940346	G	A	0.00411	IQSEC1	-	FALSE
chr4	128756632	A	G	0.00072		.	FALSE	AluSx	SINE,Alu
chr1	11783106	A	G	0.00022		.	FALSE	AluSx	SINE,Alu
chr1	206566904	T	C	0.00322	SRGAP2	+	FALSE
chr1	25169634	A	G	0.00843	CLIC4	+	FALSE
chr4	2940462	T	C	6.45116E-07	NOP14-AS1,NOP14	+,-	FALSE	AluJo	SINE,Alu
chr6	150046603	T	C	0.00730	NUP43	-	TRUE	AluSq2	SINE,Alu
chr1	33147947	A	G	0.00345	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr1	204393480	T	A	0.00783	PIK3C2B	-	FALSE
chr1	322711	A	G	0.00149		.	FALSE
chr6	114178851	T	C	0.00056	MARCKS	+	FALSE	(TGCCGC)n	SINE,Alu
chr2	10179657	A	C	0.00035		.	FALSE	L1ME4b	SINE,Alu
chr14	50053315	G	A	0.00150		.	FALSE	7SLRNA	SINE,Alu
chr1	46828700	A	G	0.00093	NSUN4	+	FALSE
chr1	46828700	A	G	0.00273	NSUN4	+	FALSE
chr1	28150601	A	T	0.00382	STX12	+	FALSE
chr1	144594308	G	A	0.00577	NBPF20	+	FALSE
chr14	50792837	A	G	0.00550	ATP5S	+	TRUE	AluSx	SINE,Alu
chr1	154179193	A	T	0.00122	C1orf43	-	FALSE
chr1	46830447	A	C	0.00168	NSUN4	+	FALSE	LTR108a_Mam	SINE,Alu
chr1	65692499	C	T	0.00930	AK4	+	FALSE	(T)n	SINE,Alu
chr2	1636053	A	G	0.00189	PXDN	-	FALSE
chr1	54636689	A	G	0.00268		.	FALSE
chr2	204301754	C	G	0.00012	RAPH1	-	FALSE
chrX	77083538	T	C	0.00055	MAGT1	-	TRUE	AluSz6	SINE,Alu
chr3	9517369	C	T	0.00395	SETD5	+	FALSE
chr2	191799592	A	G	0.00010	GLS	+	TRUE
chr1	19543309	T	C	0.00769	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr12	6601329	C	T	3.97278E-05	MRPL51	-	FALSE
chr1	47184569	G	C	0.00027	EFCAB14	-	FALSE
chr3	197612370	A	G	0.00157		.	FALSE	AluSp	SINE,Alu
chr3	105258861	A	G	0.00030	ALCAM	+	FALSE
chr9	132266648	A	G	0.00230	LINC00963	+	TRUE	AluSx	SINE,Alu
chr3	122283290	G	C	0.00029	DTX3L,PARP9	+,-	FALSE
chr2	131131424	G	C	0.00845	PTPN18	+	FALSE
chr1	148252049	A	C	0.00666	NBPF8,NBPF14,NBPF9	-	FALSE
chr17	45761102	T	G	0.00296		.	FALSE
chr2	86249962	T	C	0.00443	LOC90784	-	TRUE	AluJr	SINE,Alu
chr8	11700676	T	C	0.00534	CTSB	-	TRUE	AluSg	SINE,Alu
chr1	200375418	C	T	0.00671	ZNF281	-	FALSE
chr1	15896199	G	A	0.00483	DNAJC16	+	FALSE	AluSp	SINE,Alu
chr10	61548855	G	T	0.00070	CCDC6	-	FALSE
chr1	143398850	G	T	0.00639		.	FALSE
chr1	19543247	T	C	5.35430E-06	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	165877720	A	T	9.21169E-05	UCK2	+	FALSE
chr11	31452571	A	G	0.00084	DNAJC24	+	TRUE
chr1	1431165	C	T	0.00392	ATAD3B	+	FALSE
chr5	75003678	T	C	0.00435	POC5	-	FALSE
chr1	16889414	T	C	0.00384	NBPF1	-	TRUE	L1MC4	SINE,Alu
chr1	23636030	A	T	0.00067	HNRNPR	-	FALSE
chr1	28826130	A	G	0.00207	PHACTR4	+	TRUE	AluJb	SINE,Alu
chr1	31905888	C	A	0.00667	SERINC2	+	FALSE
chr1	186332550	A	T	0.00328	TPR	-	FALSE
chr1	94352553	C	T	0.00136	GCLM	-	FALSE	AluSx1	SINE,Alu
chr17	65334726	T	C	7.47982E-07	PSMD12	-	TRUE	AluSq	SINE,Alu
chr2	102508659	A	T	0.00261	MAP4K4	+	FALSE
chr3	101579158	A	G	0.00022	NFKBIZ	+	FALSE	AluJo	SINE,Alu
chr1	19543353	T	C	0.00036	LOC101927895,EMC1	+,-	FALSE	AluJb	SINE,Alu
chr1	205739266	C	T	0.00125	RAB29	-	FALSE
chr5	177577138	T	C	0.00163	NHP2	-	FALSE
chr12	72096335	A	G	1.07858E-05	TMEM19	+	FALSE	AluSz6	SINE,Alu
chr1	19238556	G	A	6.03260E-07	IFFO2	-	FALSE
chr1	16890428	T	A	1.76753E-05	NBPF1	-	FALSE
chr1	109465170	T	C	0.00565	GPSM2	+	FALSE
chr1	145284134	G	C	0.00203	NBPF20,NOTCH2NL	+	FALSE	(TG)n	SINE,Alu
chr1	25570562	T	A	0.00028	RSRP1	-	FALSE	Alu	SINE,Alu
chr1	40145850	G	C	0.00035	HPCAL4	-	FALSE
chr1	10520099	T	C	0.00659		.	FALSE	AluSx	SINE,Alu
chr1	247319704	T	A	0.00053	ZNF124	-	FALSE
chr3	5259480	T	A	5.79324E-05	EDEM1	+	FALSE
chr19	9672943	T	C	1.63385E-06		.	FALSE	AluSx3	SINE,Alu
chr7	22984967	A	G	0.00108	FAM126A	-	FALSE
chr1	112258252	A	G	0.00224	RAP1A	+	FALSE
chr14	50361197	G	T	1.76251E-06	ARF6	+	FALSE
chr1	1469546	G	A	0.00766	ATAD3A	+	FALSE
chr1	23519110	G	A	0.00268	HTR1D	-	FALSE	AluSc	SINE,Alu
chr1	148556784	G	A	0.00543		.	FALSE
chr1	111682307	G	C	0.00637	DRAM2,CEPT1	+,-	FALSE
chr3	156259295	T	C	0.00039	SSR3	-	TRUE	AluSq2	SINE,Alu
chr2	46524711	C	T	0.00513	EPAS1	+	FALSE
chr2	102508654	T	G	0.00010	MAP4K4	+	FALSE
chr2	31557839	G	T	0.00014	XDH	-	FALSE	AluJr	SINE,Alu
chr1	204524840	A	G	0.00557	MDM4	+	TRUE	AluSx	SINE,Alu
chr1	28661657	A	G	0.00011	MED18	+	TRUE	AluSg	SINE,Alu
chr5	118173627	T	C	0.00075	DTWD2	-	TRUE
chr1	212534448	T	C	0.00926	PPP2R5A	+	FALSE
chr1	43391826	G	T	0.00202	SLC2A1	-	FALSE
chr2	69688901	T	C	0.00503	AAK1	-	TRUE	AluSq2	SINE,Alu
chr19	59095469	A	G	5.44182E-05	CENPBD1P1	+	TRUE	AluJb	SINE,Alu
chr19	23542157	T	C	0.00140	ZNF91	-	TRUE	AluY	SINE,Alu
chr1	146650542	A	G	0.00017	PDIA3P1	+	FALSE
chr1	179044239	A	G	0.00143	FAM20B	+	TRUE	AluSx	SINE,Alu
chr16	67715890	T	C	9.92672E-05	GFOD2	-	TRUE	AluJr	SINE,Alu
chr1	9162932	A	T	0.00635		.	FALSE
chr4	17629377	A	G	0.00890		.	FALSE	AluSx3	SINE,Alu
chr1	1469782	G	C	0.00544	ATAD3A	+	FALSE
chr2	61764916	A	C	0.00189	XPO1	-	FALSE	(AC)n	SINE,Alu
chr2	191067763	A	T	0.00038	C2orf88	+	FALSE
chr8	8099397	T	C	0.00975	FAM86B3P	+	FALSE
chr1	145512098	A	G	0.00707	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluY	SINE,Alu
chr1	115313028	T	A	0.00448	SIKE1	-	FALSE	AluSx1	SINE,Alu
chr15	42860120	A	G	0.00045	HAUS2	+	TRUE	AluSg	SINE,Alu
chr16	23478710	C	A	0.00335	GGA2	-	FALSE	(AC)n	SINE,Alu
chr2	198368110	C	A	0.00053	HSPE1,HSPE1-MOB4	+	FALSE
chr4	39550977	T	C	0.00987	UGDH-AS1,SMIM14	+,-	FALSE	AluSz	SINE,Alu
chr1	19232211	G	A	0.00552	IFFO2	-	FALSE	(GT)n	SINE,Alu
chr1	179326847	A	G	0.00577	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	100343254	G	A	0.00725	AGL	+	FALSE
chr12	1611791	C	G	0.00971	LINC00942	+	FALSE
chr1	6583270	C	G	0.00529	NOL9	-	FALSE
chr3	10192709	C	T	0.00082	VHL	+	FALSE	AluSx1	SINE,Alu
chr1	16889575	T	C	0.00969	NBPF1	-	TRUE
chr1	145500933	C	T	0.00982	NBPF20,NBPF10,LIX1L	+	FALSE
chr1	200375404	T	G	0.00030	ZNF281	-	FALSE
chr21	33032035	T	A	1.90109E-05	SOD1	+	FALSE
chr1	168220489	A	G	0.00525		.	FALSE	AluSz6	SINE,Alu
chrX	77083939	T	C	5.71267E-05	MAGT1	-	TRUE	AluSz	SINE,Alu
chr2	223807817	A	C	0.00991	ACSL3	+	FALSE	(A)n	SINE,Alu
chr1	142619487	A	G	0.00511		.	FALSE
chr1	36068196	T	C	0.00376	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	160966299	T	C	0.00033	F11R	-	TRUE	AluSg	SINE,Alu
chr6	109001948	G	A	0.00030	FOXO3	+	FALSE	(A)n	SINE,Alu
chr1	109240641	T	A	0.00090	PRPF38B	+	FALSE
chr1	16929279	G	A	0.00138	NBPF1	-	FALSE	ERVL-E-int	SINE,Alu
chr1	9161011	T	C	3.85416E-05		.	FALSE	AluJb	SINE,Alu
chr2	37479023	G	A	0.00063	PRKD3	-	FALSE
chr1	28836975	A	G	0.00023	SNHG3,RCC1	+	TRUE	AluSc	SINE,Alu
chr1	1622754	A	G	0.00221	CDK11B,SLC35E2B	-	FALSE	MLT1F2	SINE,Alu
chr3	48787051	T	C	0.00105	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr4	129795660	T	A	0.00454	JADE1	+	FALSE
chr7	44841236	G	A	0.00819	PPIA	+	FALSE
chr2	27293350	A	T	0.00314	AGBL5,OST4	+,-	FALSE
chrX	123046302	A	G	0.00649	XIAP	+	TRUE	AluJb	SINE,Alu
chr1	3545194	C	G	0.00044	TPRG1L	+	FALSE
chr1	36067752	T	C	0.00123	PSMB2	-	TRUE	AluSz	SINE,Alu
chr3	38566722	T	C	0.00426	EXOG	+	FALSE	MIRb	SINE,Alu
chr1	9160989	T	C	0.00041		.	FALSE	AluJb	SINE,Alu
chr1	179044174	A	G	0.00410	FAM20B	+	TRUE	AluSx	SINE,Alu
chr1	179326847	A	G	0.00031	SOAT1	+	TRUE	AluJo	SINE,Alu
chr1	10520072	T	C	0.00115		.	FALSE	AluSx	SINE,Alu
chr1	10519936	T	C	0.00029		.	FALSE	AluJr	SINE,Alu
chr1	16890639	C	T	0.00095	NBPF1	-	FALSE
chr1	6659505	G	A	0.00405	KLHL21	-	FALSE
chr1	10517313	T	C	0.00196		.	FALSE	AluJr	SINE,Alu
chr4	6675519	A	C	0.00064	LOC105374366	-	FALSE
chr2	203744629	T	C	0.00363		.	FALSE	AluSx1	SINE,Alu
chr6	126661502	G	T	0.00873	CENPW	+	FALSE
chr1	230416399	G	T	5.37638E-05	GALNT2	+	FALSE
chr8	6263057	A	C	0.00419	LOC100287015	-	FALSE
chr5	41917695	C	T	0.00019	C5orf51	+	FALSE
chr1	226333561	A	G	0.00373	ACBD3	-	FALSE
chr1	6583066	T	C	0.00088	NOL9	-	TRUE	AluSx4	SINE,Alu
chr1	204520000	A	G	0.00032	MDM4	+	TRUE	Charlie2a	SINE,Alu
chr1	179852074	T	C	0.00033	TOR1AIP1	+	FALSE
chr1	112170157	C	G	0.00335	RAP1A	+	FALSE	L1ME4a	SINE,Alu
chr19	42375627	A	G	0.00463		.	FALSE	AluSx	SINE,Alu
chr3	12613866	T	C	0.00043	MKRN2	+	FALSE
chr1	220231959	T	C	0.00028	RNU5F-1,BPNT1	+,-	FALSE	AluSz	SINE,Alu
chr2	132278176	T	G	0.00291	LOC150776	+	FALSE
chr1	10521200	T	C	3.54723E-07	DFFA	-	TRUE	AluY	SINE,Alu
chr8	30536606	T	C	0.00017	GSR	-	TRUE	AluSp	SINE,Alu
chr2	178406768	T	A	0.00416	AGPS	+	FALSE
chr1	9160976	T	C	0.00015		.	FALSE	AluJb	SINE,Alu
chr2	232319613	C	T	0.00022	NCL	-	FALSE
chr1	26608018	G	A	2.25777E-05		.	FALSE
chr3	45722047	A	G	0.00085	LIMD1,LIMD1-AS1	+,-	FALSE	AluJb	SINE,Alu
chr1	203277245	G	A	0.00115	BTG2	+	FALSE
chr6	74133914	T	C	0.00014		.	FALSE	AluY	SINE,Alu
chr1	10521200	T	C	0.00096	DFFA	-	TRUE	AluY	SINE,Alu
chr1	16575726	T	C	0.00916	FBXO42	-	FALSE
chr1	113240711	G	A	0.00454	MOV10	+	FALSE
chr1	11847346	G	C	0.00547	C1orf167,MTHFR	+,-	FALSE
chr1	148753279	G	T	0.00358		.	FALSE
chr3	172115476	A	G	0.00892	FNDC3B	+	FALSE	(A)n	SINE,Alu
chr10	63829539	C	T	0.00918	ARID5B	+	FALSE
chr8	145159708	A	G	0.00101	MAF1	+	FALSE
chr1	145100851	A	G	0.00066	NBPF20,SEC22B	+	FALSE	AluSg4	SINE,Alu
chr2	44114074	G	A	0.00246	LRPPRC	-	FALSE	AluSz6	SINE,Alu
chr5	37290397	T	C	0.00305		.	FALSE	AluSz	SINE,Alu
chr10	89623863	G	C	0.00107	PTEN	+	FALSE	(CGG)n	SINE,Alu
chr6	12120445	A	G	0.00037	HIVEP1	+	FALSE
chr2	86251114	T	C	0.00150		.	FALSE	AluSx	SINE,Alu
chr8	143352528	A	C	0.00312	TSNARE1	-	FALSE
chr3	197399402	T	C	0.00840	RUBCN	-	FALSE
chr4	152583924	A	T	0.00284	FAM160A1	+	FALSE
chr1	15755550	A	C	0.00969	EFHD2	+	FALSE
chr1	46075168	C	A	0.00155	NASP	+	FALSE	A-rich	SINE,Alu
chr1	148932848	A	G	0.00715	LOC645166	+	FALSE
chr1	203771852	G	T	0.00883	ZC3H11A	+	FALSE	(T)n	SINE,Alu
chr1	33149443	A	G	0.00327	SYNC,RBBP4	+,-	FALSE	AluSx1	SINE,Alu
chr17	49042289	G	T	0.00737	SPAG9	-	FALSE	AluJb	SINE,Alu
chr1	10519932	T	C	0.00323		.	FALSE	AluJr	SINE,Alu
chr2	152314385	G	A	0.00040	RIF1	+	FALSE
chr1	214813487	A	G	0.00027	CENPF	+	FALSE
chr1	569981	C	A	4.36771E-05		.	FALSE
chr1	202993056	T	C	0.00046	TMEM183A	+	FALSE
chr1	53359181	A	G	0.00699	ZYG11A	+	TRUE	AluSx	SINE,Alu
chr1	54493443	C	A	0.00872	TMEM59	-	FALSE	AluSz6	SINE,Alu
chr1	230415244	T	C	0.00360	GALNT2	+	FALSE
chr1	184761350	T	C	0.00219	FAM129A	-	TRUE	AluJo	SINE,Alu
chr1	97144750	T	C	0.00262		.	FALSE
chr4	42088291	C	A	0.00000	SLC30A9	+	FALSE
chr3	137787192	T	C	0.00764	DZIP1L	-	FALSE
chr2	55462744	C	A	0.00033	RPS27A	+	FALSE
chr7	2473747	A	G	0.00872	CHST12	+	FALSE	(CCGC)n	SINE,Alu
chr1	156565057	T	C	0.00423	GPATCH4	-	FALSE
chr5	125961611	A	G	0.00113	PHAX	+	TRUE	AluSz6	SINE,Alu
chr1	27212513	T	C	0.00260	GPN2	-	FALSE
chr1	118472401	C	T	0.00396	WDR3	+	FALSE
chr1	143915747	G	A	0.00603		.	FALSE
chr5	6633042	C	T	0.00348	NSUN2	-	FALSE
chr17	36104904	A	G	0.00442	HNF1B	-	FALSE	G-rich	SINE,Alu
chr1	150208462	A	C	9.89925E-05	ANP32E	-	FALSE
chr2	187544234	C	T	0.00078	ITGAV	+	FALSE
chr2	24223251	A	G	0.00489	UBXN2A	+	TRUE	AluSc	SINE,Alu
chrX	77083981	T	C	0.00647	MAGT1	-	TRUE	AluSz	SINE,Alu
chr16	88763958	G	A	7.55606E-05	RNF166	-	FALSE
chr1	53288870	A	G	0.00501	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr1	115249239	G	A	0.00034	NRAS	-	FALSE
chr5	125962176	A	G	0.00020	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	154557171	G	A	0.00329	ADAR	-	FALSE	A-rich	SINE,Alu
chr3	32207907	T	C	0.00922	GPD1L	+	FALSE
chr4	140310370	T	C	0.00335	NAA15	+	FALSE	(T)n	SINE,Alu
chr17	80347528	T	C	0.00048	OGFOD3	-	TRUE	AluJb	SINE,Alu
chr4	76568479	T	A	0.00825	G3BP2	-	FALSE
chr1	19934900	G	A	0.00605	MINOS1,MINOS1-NBL1,RPS14P3	+	FALSE
chr8	145159706	C	G	0.00561	MAF1	+	FALSE
chr1	8931947	T	C	0.00059	ENO1	-	FALSE
chr1	32661615	A	T	0.00033	TXLNA	+	FALSE
chr2	37330343	C	T	0.00055		.	FALSE	AluSq2	SINE,Alu
chr1	16889004	C	T	0.00878	NBPF1	-	FALSE
chr1	10517486	T	C	0.00626		.	FALSE	AluSx1	SINE,Alu
chr4	25278988	T	C	2.09007E-08	PI4K2B	+	FALSE
chr2	206988452	A	T	0.00669	NDUFS1	-	FALSE
chr3	50150360	A	G	0.00827	RBM5	+	TRUE	AluSx	SINE,Alu
chr2	176792488	G	T	0.00195	LNPK	-	FALSE
chr3	47386059	T	C	9.15846E-06	KLHL18	+	FALSE
chr5	79923360	T	C	0.00727	DHFR	-	TRUE	AluJr	SINE,Alu
chr1	148343689	A	G	0.00517	NBPF8,NBPF14,NBPF9	-	FALSE
chr1	11347164	A	C	0.00667	UBIAD1	+	FALSE
chr2	131104524	G	A	0.00912	IMP4	+	FALSE	L1MA9	SINE,Alu
chr4	3242100	G	A	0.00916	HTT	+	FALSE
chr7	38764340	T	C	0.00630	VPS41	-	TRUE	AluSp	SINE,Alu
chr1	109479978	G	T	0.00057	CLCC1	-	FALSE
chr6	3021448	T	C	0.00126	HTATSF1P2	-	TRUE	AluJr4	SINE,Alu
chr8	62626962	C	T	0.00823	ASPH	-	FALSE
chr14	75202856	A	G	3.12821E-09	FCF1	+	TRUE	AluSx	SINE,Alu
chr1	16933629	A	G	0.00310	NBPF1	-	FALSE	GA-rich	SINE,Alu
chr2	24223142	A	G	0.00524	UBXN2A	+	TRUE	AluSc	SINE,Alu
chr1	1677253	T	C	0.00145	SLC35E2	-	FALSE
chr2	101622881	C	A	1.48865E-05	RPL31	+	FALSE
chr2	207146629	A	G	0.00434	ZDBF2	+	FALSE
chr5	145666114	G	T	0.00766	RBM27	+	FALSE
chr1	205759960	C	T	4.24096E-05	SLC41A1	-	FALSE
chr6	24720531	C	G	0.00960		.	FALSE	(GGC)n	SINE,Alu
chr1	16889624	T	C	0.00614	NBPF1	-	TRUE
chr16	10624993	T	C	1.49189E-05	EMP2	-	TRUE	AluSx3	SINE,Alu
chr16	1411034	A	G	0.00322	GNPTG	+	TRUE	AluSz	SINE,Alu
chr2	202031806	A	T	0.00543	CFLAR	+	FALSE
chr1	19578192	G	A	0.00778	MRTO4	+	FALSE
chr1	16954981	C	A	0.00876	CROCCP2	-	FALSE
chr1	155853219	A	G	0.00520	SYT11	+	TRUE	AluJb	SINE,Alu
chr1	160966351	T	C	4.07282E-11	F11R	-	TRUE	AluSg	SINE,Alu
chr5	137087812	A	C	0.00607	HNRNPA0	-	FALSE
chr19	19791276	A	G	0.00069	ZNF101	+	TRUE	AluSq2	SINE,Alu
chr1	10520672	T	C	0.00222	DFFA	-	TRUE	AluSc8	SINE,Alu
chr1	186281696	T	G	0.00564	PRG4,TPR	+,-	FALSE
chr21	40195059	A	G	0.00817	ETS2	+	FALSE
chr17	65335477	T	C	2.02482E-05	PSMD12	-	TRUE	AluSx	SINE,Alu
chr1	89447720	G	A	0.00521	KYAT3,RBMXL1	-	FALSE
chr1	6582221	T	C	6.47537E-05	NOL9	-	TRUE	AluSq4	SINE,Alu
chr4	57326329	A	G	0.00077	PAICS	+	TRUE	AluJr	SINE,Alu
chr3	196082911	T	C	0.00250	UBXN7	-	FALSE
chr6	42854611	A	G	0.00541	RPL7L1	+	TRUE	AluSc	SINE,Alu
chr1	27182750	G	C	0.00141		.	FALSE
chr1	21766776	G	C	0.00343	NBPF3	+	FALSE
chr9	91724517	C	T	0.00289	SHC3	-	FALSE
chr16	89623619	A	G	0.00275	SPG7	+	FALSE
chr1	210029539	G	A	0.00231	DIEXF	+	FALSE
chr4	25279320	G	A	1.66733E-12	PI4K2B	+	FALSE
chr1	109816293	G	C	0.00759	CELSR2	+	FALSE
chr1	155181396	A	G	0.00209	MTX1	+	FALSE
chr1	10517508	T	C	0.00034		.	FALSE	AluSx1	SINE,Alu
chr3	48787052	T	C	0.00631	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr1	206566195	C	T	0.00052	SRGAP2	+	FALSE
chr2	206983298	T	C	0.00811		.	FALSE	AluJb	SINE,Alu
chr1	16945504	C	T	0.00995	CROCCP2	-	FALSE
chr1	16890428	T	A	0.00233	NBPF1	-	FALSE
chr1	68940885	G	A	0.00500	DEPDC1	-	FALSE	MIR	SINE,Alu
chr5	151041883	G	A	0.00343	SPARC	-	FALSE
chr9	136209398	G	A	0.00150	MED22	-	FALSE
chr5	134062605	C	T	0.00019	SEC24A	+	FALSE
chr2	91847987	C	G	0.00083		.	FALSE	TAR1	SINE,Alu
chr1	247319705	T	G	6.58458E-05	ZNF124	-	FALSE
chr6	143832707	G	A	0.00418	FUCA2	-	FALSE	(GCA)n	SINE,Alu
chr1	53289688	A	G	0.00069	ZYG11B	+	TRUE	AluSz	SINE,Alu
chr2	32535836	A	G	0.00163		.	FALSE	AluJb	SINE,Alu
chr1	36068210	T	C	0.00812	PSMB2	-	TRUE	AluSc	SINE,Alu
chr1	11119935	G	T	2.46542E-05	SRM	-	FALSE
chr3	49396751	T	C	0.00000	RHOA	-	FALSE
chr2	50147866	G	A	0.00130	NRXN1	-	FALSE	(GT)n	SINE,Alu
chr1	94930345	G	A	0.00223	ABCD3	+	FALSE
chr1	10042988	A	G	0.00359	NMNAT1	+	TRUE	AluSc	SINE,Alu
chr1	20976023	T	C	0.00889	PINK1,PINK1-AS	+,-	FALSE	AluSz	SINE,Alu
chr1	1246979	G	T	0.00168	PUSL1,CPSF3L	+,-	FALSE
chr2	197021372	T	A	0.00285	STK17B	-	FALSE
chr1	16892277	G	T	0.00164	NBPF1	-	FALSE
chr9	34088016	G	A	0.00226	DCAF12	-	FALSE
chr5	14510071	G	T	0.00130	TRIO	+	FALSE
chr4	2940164	T	C	2.22609E-06	NOP14-AS1,NOP14	+,-	FALSE	AluSp	SINE,Alu
chr1	150548887	C	T	0.00014	MCL1	-	FALSE
chr2	128620438	C	A	0.00230	AMMECR1L	-	FALSE
chr5	180665123	G	A	0.00259	RACK1	-	FALSE
chr22	44890573	T	C	1.87764E-05	LDOC1L	-	FALSE
chr2	32582399	T	G	0.00147	BIRC6	+	FALSE	(GGC)n	SINE,Alu
chr1	85785557	T	A	0.00141	DDAH1	-	FALSE
chr1	62628606	A	G	0.00027	PATJ	+	TRUE	AluSg4	SINE,Alu
chr2	131906031	C	T	0.00439	PLEKHB2	+	FALSE
chr1	28662212	A	G	0.00098	MED18	+	TRUE	AluSq2	SINE,Alu
chr1	10519888	T	C	0.00878		.	FALSE	AluJr	SINE,Alu
chr1	156262653	A	C	0.00128	GLMP	-	FALSE
chr1	16945227	G	T	0.00090	CROCCP2	-	FALSE
chr1	33086905	T	C	0.00598	ZBTB8OS	-	FALSE	AluY	SINE,Alu
chr1	27202812	T	C	0.00356		.	FALSE	AluSq2	SINE,Alu
chr10	75008841	T	C	0.00088	DNAJC9-AS1,MRPS16	+,-	FALSE	AluJr	SINE,Alu
chr7	99636950	A	G	0.00927	ZKSCAN1	+	FALSE	AluSx1	SINE,Alu
chr1	33147915	A	G	6.77632E-09	SYNC,RBBP4	+,-	FALSE	AluSx	SINE,Alu
chr16	10625058	T	C	2.66942E-12	EMP2	-	TRUE	AluSx3	SINE,Alu
chr6	132617374	C	G	0.00062	MOXD1	-	FALSE
chr2	36776054	C	T	0.00028	CRIM1	+	FALSE
chr1	66100980	A	T	0.00033	LEPR	+	FALSE
chr19	57816349	A	G	8.96695E-06		.	FALSE	AluY	SINE,Alu
chr5	130537761	A	G	0.00126	LYRM7	+	FALSE	AluJb	SINE,Alu
chr10	79570873	G	T	0.00292	DLG5	-	FALSE
chr1	93307479	C	A	0.00019	FAM69A,RPL5	+,-	FALSE
chr13	31033316	T	A	0.00497	HMGB1	-	FALSE
chr3	14526625	T	G	0.00414	SLC6A6	+	FALSE
chr1	10520202	T	C	0.00529		.	FALSE	AluSx	SINE,Alu
chr1	145512951	A	G	0.00180	NBPF20,NBPF10,RBM8A,GNRHR2	+,-	FALSE	AluSz6	SINE,Alu
chr1	52306082	A	T	0.00038	NRDC	-	FALSE	(TCA)n	SINE,Alu
chr1	10318652	C	G	0.00047	KIF1B	+	FALSE
chr1	32641383	C	A	0.00112	KPNA6	+	FALSE	AluSx3	SINE,Alu
chr5	125962344	A	G	0.00101	PHAX	+	TRUE	AluSc	SINE,Alu
chr1	76253041	T	A	0.00646	RABGGTB	+	FALSE
chr1	45976259	A	C	0.00015	MMACHC	+	FALSE
chr3	48485452	T	A	0.00363	TMA7	+	FALSE
chr6	52860743	T	G	1.01575E-05		.	FALSE	7SK	SINE,Alu
chr5	135392426	T	C	8.62804E-07	TGFBI	+	FALSE
chr5	79923843	T	C	0.00363	DHFR	-	TRUE	AluSp	SINE,Alu
chr1	197476807	G	C	0.00287	DENND1B	-	FALSE
chr1	244572643	C	A	0.00681	ADSS	-	FALSE
chr12	124105948	C	T	0.00778	EIF2B1	-	FALSE
chr1	1668168	G	T	0.00344	SLC35E2	-	FALSE	AluSz	SINE,Alu
chr6	42857136	A	G	2.38933E-09	RPL7L1	+	TRUE	AluSp	SINE,Alu
chr6	33648144	C	T	0.00453	ITPR3	+	FALSE
chr3	48786991	T	C	0.00584	PRKAR2A	-	TRUE	AluSx3	SINE,Alu
chr3	37031951	G	A	0.00914	EPM2AIP1	-	FALSE	(A)n	SINE,Alu
chr2	129024408	G	A	0.00502	HS6ST1	-	FALSE
chr3	49067308	G	A	0.00278	QRICH1	-	FALSE
chr1	150704486	T	C	0.00947	CTSS	-	TRUE	AluJo	SINE,Alu
chr1	19953131	G	A	0.00486	MINOS1,MINOS1-NBL1	+	FALSE
chr1	45452227	G	C	0.00046	EIF2B3	-	FALSE
chr11	65179818	C	T	0.00799	FRMD8	+	FALSE
chr5	110463621	G	T	0.00786	WDR36	+	FALSE	(T)n	SINE,Alu
chr1	53288924	A	G	0.00099	ZYG11B	+	TRUE	AluJo	SINE,Alu
chr2	75888160	A	C	0.00188	MRPL19	+	FALSE	L1MB4	SINE,Alu
chr3	15113810	T	C	0.00201	RBSN	-	TRUE	AluSz6	SINE,Alu
chr7	94060360	T	G	0.00014	COL1A2	+	FALSE
chr5	44818826	G	A	0.00595		.	FALSE
chr2	217366195	C	A	0.00929		.	FALSE

RBP	U2AF1
Knock-Method	shRNA
RBP Family	zf-CCCH
Biosample Name	K562
Tissue Type	Haematopoietic_and_lymphoid_tissue
Biosample Type	Cell line
# of Control	2
# of Treat	2
Species	Human
Data Source	ENCODE
Profile ID	ENCSR342EDG
Platform	HiSeq
Pubmed ID	32252787

U2AF1 - Target Gene Network